Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065948.t1 | KEH30701.1 | 96.9 | 447 | 10 | 1 | 11 | 453 | 115 | 561 | 3.90E-258 | 900.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065948.t1 | F4IVI0 | 60.9 | 448 | 170 | 2 | 11 | 453 | 78 | 525 | 6.3e-164 | 578.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065948.t1 | A0A072UMU0 | 96.9 | 447 | 10 | 1 | 11 | 453 | 115 | 561 | 2.8e-258 | 900.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene065948 | 0.829344 | 5.43E-55 | -1.69E-46 |
MS.gene049989 | MS.gene065948 | 0.806751 | 7.06E-50 | -1.69E-46 |
MS.gene050297 | MS.gene065948 | 0.815946 | 7.12E-52 | -1.69E-46 |
MS.gene050310 | MS.gene065948 | 0.835424 | 1.69E-56 | -1.69E-46 |
MS.gene050648 | MS.gene065948 | 0.822569 | 2.21E-53 | -1.69E-46 |
MS.gene051263 | MS.gene065948 | 0.800611 | 1.33E-48 | -1.69E-46 |
MS.gene051478 | MS.gene065948 | 0.80191 | 7.20E-49 | -1.69E-46 |
MS.gene055537 | MS.gene065948 | 0.820125 | 8.09E-53 | -1.69E-46 |
MS.gene056169 | MS.gene065948 | 0.805986 | 1.02E-49 | -1.69E-46 |
MS.gene056228 | MS.gene065948 | 0.817131 | 3.87E-52 | -1.69E-46 |
MS.gene057082 | MS.gene065948 | 0.806315 | 8.73E-50 | -1.69E-46 |
MS.gene058197 | MS.gene065948 | 0.827599 | 1.43E-54 | -1.69E-46 |
MS.gene058198 | MS.gene065948 | 0.824957 | 6.09E-54 | -1.69E-46 |
MS.gene059300 | MS.gene065948 | 0.844373 | 7.87E-59 | -1.69E-46 |
MS.gene06057 | MS.gene065948 | 0.84365 | 1.23E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 92 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAGATCACACGGTATTTA+AGG | 0.142154 | 4.2:+31424059 | MS.gene065948:CDS |
GCCTTCTCCAACCATTTAAT+TGG | 0.217072 | 4.2:-31420291 | None:intergenic |
ATGAGGAATATACCGTTTAA+AGG | 0.268852 | 4.2:-31424349 | None:intergenic |
AGGGTCTCTGTCTTGTTGAC+TGG | 0.285319 | 4.2:+31424010 | MS.gene065948:intron |
GGATAGGCCGTGGAAATTTC+AGG | 0.295323 | 4.2:+31424125 | MS.gene065948:CDS |
AAGGGAGATTGTAGGACTTC+TGG | 0.299891 | 4.2:+31424078 | MS.gene065948:CDS |
CATGATGTTGGCTTGATTCA+TGG | 0.315489 | 4.2:+31422465 | MS.gene065948:CDS |
CCAGATCACACGGTATTTAA+GGG | 0.329918 | 4.2:+31424060 | MS.gene065948:CDS |
TCTATAAGCTCGGCATTTCC+AGG | 0.343594 | 4.2:+31419050 | MS.gene065948:CDS |
AGGAATAAAGTTATAGAGAT+AGG | 0.362344 | 4.2:+31420809 | MS.gene065948:CDS |
TAACGAATAAGCAGATTATC+AGG | 0.372673 | 4.2:-31422498 | None:intergenic |
GAAATGCAGAGCCAATTAAA+TGG | 0.372734 | 4.2:+31420280 | MS.gene065948:intron |
GATGCTGCATAATACCTATA+TGG | 0.374786 | 4.2:+31424272 | MS.gene065948:CDS |
AGAAACTCTACTGAGAAATA+AGG | 0.378591 | 4.2:-31420319 | None:intergenic |
ATACCGTTTAAAGGGTAGTC+TGG | 0.385293 | 4.2:-31424340 | None:intergenic |
CACATAAAGTGAAGCATCAT+TGG | 0.388819 | 4.2:-31418975 | None:intergenic |
ATCTTTCAGAGGTCAAACTA+TGG | 0.389080 | 4.2:+31422189 | MS.gene065948:intron |
TGCATTCTTCAAAGTGGATA+AGG | 0.400192 | 4.2:-31420783 | None:intergenic |
GGAATTGAAGAAGTCCTTCC+AGG | 0.400891 | 4.2:+31424648 | MS.gene065948:CDS |
TATCAAGGGCTGTGCTGGAC+AGG | 0.408099 | 4.2:+31421816 | MS.gene065948:CDS |
CCCTTAAATACCGTGTGATC+TGG | 0.410725 | 4.2:-31424060 | None:intergenic |
AAGGATTTATCTTCTTCAAA+AGG | 0.419099 | 4.2:-31420614 | None:intergenic |
GGGTCTCTGTCTTGTTGACT+GGG | 0.421552 | 4.2:+31424011 | MS.gene065948:intron |
TTCCCAGACTACCCTTTAAA+CGG | 0.426277 | 4.2:+31424337 | MS.gene065948:CDS |
TGTCTTGTTGACTGGGGAAG+AGG | 0.428927 | 4.2:+31424018 | MS.gene065948:CDS |
GTACATATCAAGGGCTGTGC+TGG | 0.431190 | 4.2:+31421811 | MS.gene065948:intron |
ACTACCCTGGCCATGATGAT+AGG | 0.432249 | 4.2:+31424614 | MS.gene065948:CDS |
GTCTGTAATTATTTAGCTCA+TGG | 0.445369 | 4.2:+31422255 | MS.gene065948:CDS |
AAGCGGTTGTTGGCATGATC+AGG | 0.450027 | 4.2:+31423911 | MS.gene065948:CDS |
GCAGATGCATATGGCCTTTG+CGG | 0.453201 | 4.2:+31424237 | MS.gene065948:CDS |
TGAGGAATATACCGTTTAAA+GGG | 0.455127 | 4.2:-31424348 | None:intergenic |
ATCAACTCATATGTGGTCAT+AGG | 0.457303 | 4.2:+31422375 | MS.gene065948:CDS |
TGTGGTCATAGGAAAATTCA+TGG | 0.457949 | 4.2:+31422386 | MS.gene065948:CDS |
TGATGATAGGAAGTTGTTGC+AGG | 0.460062 | 4.2:+31424627 | MS.gene065948:CDS |
AACTTCCTATCATCATGGCC+AGG | 0.468707 | 4.2:-31424619 | None:intergenic |
TTATAAAGAATCTGCTACGT+TGG | 0.469635 | 4.2:+31420548 | MS.gene065948:CDS |
AGGGGTAACCTCACAGAAGA+TGG | 0.471394 | 4.2:+31423876 | MS.gene065948:intron |
GGAAATGCCGAGCTTATAGA+TGG | 0.474826 | 4.2:-31419047 | None:intergenic |
TCGAGCACTAAATCTTATAC+AGG | 0.477530 | 4.2:+31420752 | MS.gene065948:CDS |
GTGGAATTAAGTACATATCA+AGG | 0.477713 | 4.2:+31421801 | MS.gene065948:intron |
TGTCAACAGGCAGATGCATA+TGG | 0.477835 | 4.2:+31424228 | MS.gene065948:intron |
GTCTTGTTGACTGGGGAAGA+GGG | 0.481446 | 4.2:+31424019 | MS.gene065948:CDS |
TTTAGTGCCACAACTTCATC+AGG | 0.484459 | 4.2:-31421880 | None:intergenic |
TCTTAGACCGAAGCGGTTGT+TGG | 0.486235 | 4.2:+31423901 | MS.gene065948:CDS |
ATTGAAACTTTGCATGATGT+TGG | 0.493369 | 4.2:+31422453 | MS.gene065948:CDS |
CGGTATTTAAGGGAGATTGT+AGG | 0.498060 | 4.2:+31424070 | MS.gene065948:CDS |
TTGAGTTTCTTTATACGTTG+AGG | 0.503378 | 4.2:-31424688 | None:intergenic |
GATCATGCCAACAACCGCTT+CGG | 0.504689 | 4.2:-31423908 | None:intergenic |
TGCAGAGCCAATTAAATGGT+TGG | 0.506536 | 4.2:+31420284 | MS.gene065948:CDS |
TAAAACTCCCAAGGGAAAGC+TGG | 0.507197 | 4.2:-31422000 | None:intergenic |
AGGAGTTACTCGCGAAGCAA+AGG | 0.517311 | 4.2:+31424710 | MS.gene065948:CDS |
AAAATAATGACATTAATCCA+TGG | 0.520606 | 4.2:+31420571 | MS.gene065948:CDS |
CCTTGATGCATTCTTCAAAG+TGG | 0.528643 | 4.2:-31420789 | None:intergenic |
GGAGTTACTCGCGAAGCAAA+GGG | 0.529180 | 4.2:+31424711 | MS.gene065948:CDS |
TTTAGCTCATGGGACACTAC+AGG | 0.533494 | 4.2:+31422266 | MS.gene065948:CDS |
GCATTGAGATGCAGGAGGAT+AGG | 0.536057 | 4.2:+31424109 | MS.gene065948:CDS |
GTTACTGGAACGTCGAGCTA+TGG | 0.540651 | 4.2:+31424563 | MS.gene065948:intron |
TACCGTTTAAAGGGTAGTCT+GGG | 0.543989 | 4.2:-31424339 | None:intergenic |
TCTGTAATTATTTAGCTCAT+GGG | 0.545403 | 4.2:+31422256 | MS.gene065948:CDS |
GCCAATTAAATGGTTGGAGA+AGG | 0.547669 | 4.2:+31420290 | MS.gene065948:CDS |
AAATAATGACATTAATCCAT+GGG | 0.548303 | 4.2:+31420572 | MS.gene065948:CDS |
TGATGAAGTTGTGGCACTAA+AGG | 0.552634 | 4.2:+31421882 | MS.gene065948:CDS |
CCACTTTGAAGAATGCATCA+AGG | 0.554945 | 4.2:+31420789 | MS.gene065948:CDS |
GATCAGAGCTGATATAGTCC+TGG | 0.561424 | 4.2:-31424666 | None:intergenic |
GCAACAACTTCCTATCATCA+TGG | 0.569220 | 4.2:-31424624 | None:intergenic |
TGGAATTAAGTACATATCAA+GGG | 0.579215 | 4.2:+31421802 | MS.gene065948:intron |
ATCAAGGGCTGTGCTGGACA+GGG | 0.580276 | 4.2:+31421817 | MS.gene065948:CDS |
CAAGGTTGCTTCAAGCCAGA+AGG | 0.585263 | 4.2:+31420350 | MS.gene065948:CDS |
CGATACATGTAAAACTCCCA+AGG | 0.587726 | 4.2:-31422009 | None:intergenic |
GCTGACACCATCTATAAGCT+CGG | 0.589888 | 4.2:+31419040 | MS.gene065948:CDS |
CAAAAGGTCATTCAGAGTAG+AGG | 0.591431 | 4.2:-31420598 | None:intergenic |
TAGAGTTTCTGAAATATGCA+AGG | 0.593936 | 4.2:+31420332 | MS.gene065948:CDS |
TTCAGAGTAGAGGCATCCCA+TGG | 0.598106 | 4.2:-31420588 | None:intergenic |
AGATGCAGGAGGATAGGCCG+TGG | 0.601296 | 4.2:+31424115 | MS.gene065948:CDS |
TATAAGATTTAGTGCTCGAA+CGG | 0.602170 | 4.2:-31420748 | None:intergenic |
ATCTGCTTATTCGTTATGCT+AGG | 0.602539 | 4.2:+31422505 | MS.gene065948:CDS |
GGATGTCATCAACTCATATG+TGG | 0.602720 | 4.2:+31422368 | MS.gene065948:intron |
TCAACGTATAAAGAAACTCA+AGG | 0.607844 | 4.2:+31424690 | MS.gene065948:CDS |
GGGGTAACCTCACAGAAGAT+GGG | 0.608152 | 4.2:+31423877 | MS.gene065948:intron |
AGAGCTGATATAGTCCTGGA+AGG | 0.609239 | 4.2:-31424662 | None:intergenic |
ACTTCCTATCATCATGGCCA+GGG | 0.620638 | 4.2:-31424618 | None:intergenic |
TGACTCACCTGAAATTTCCA+CGG | 0.621709 | 4.2:-31424132 | None:intergenic |
CAGTGATCCTGATGAAGTTG+TGG | 0.630586 | 4.2:+31421873 | MS.gene065948:CDS |
TAATCTCTTTCCAGATCACA+CGG | 0.648178 | 4.2:+31424050 | MS.gene065948:CDS |
TCGTATGAACAACACCGCAA+AGG | 0.654155 | 4.2:-31424251 | None:intergenic |
GGTCTCTGTCTTGTTGACTG+GGG | 0.656870 | 4.2:+31424012 | MS.gene065948:CDS |
GATACATGTAAAACTCCCAA+GGG | 0.657048 | 4.2:-31422008 | None:intergenic |
AAGGGCTGTGCTGGACAGGG+AGG | 0.672386 | 4.2:+31421820 | MS.gene065948:CDS |
GATGGGTTCTTAGACCGAAG+CGG | 0.673200 | 4.2:+31423894 | MS.gene065948:CDS |
TCGATGCATTGAGATGCAGG+AGG | 0.674555 | 4.2:+31424104 | MS.gene065948:CDS |
AAGATGCTTAATGACTACCC+TGG | 0.701217 | 4.2:+31424601 | MS.gene065948:CDS |
CTAAGAACCCATCTTCTGTG+AGG | 0.704393 | 4.2:-31423884 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATAATACTTCATTT+AGG | + | chr4.2:31420052-31420071 | MS.gene065948:intron | 10.0% |
!!! | ACTATATTATTTTGTTTTTA+AGG | + | chr4.2:31422773-31422792 | MS.gene065948:intron | 10.0% |
!!! | TAATTTTTATTCTGATAATT+TGG | + | chr4.2:31424525-31424544 | MS.gene065948:intron | 10.0% |
!! | AAATTAAAGTTGAAAACAAA+AGG | - | chr4.2:31424511-31424530 | None:intergenic | 15.0% |
!! | AATACAAGACATTAAAAAAA+GGG | - | chr4.2:31421494-31421513 | None:intergenic | 15.0% |
!! | ATAAAACATATTATAATGTC+AGG | - | chr4.2:31423122-31423141 | None:intergenic | 15.0% |
!! | ATTAAAAGATAAATGATTTG+TGG | + | chr4.2:31423437-31423456 | MS.gene065948:intron | 15.0% |
!! | TAAAACATATTATAATGTCA+GGG | - | chr4.2:31423121-31423140 | None:intergenic | 15.0% |
!! | TAAAGAATAGTGATATATAA+AGG | - | chr4.2:31420428-31420447 | None:intergenic | 15.0% |
!! | TATAAACTTGTATACTTATT+AGG | + | chr4.2:31419536-31419555 | MS.gene065948:intron | 15.0% |
!! | TTATATATCACTATTCTTTA+TGG | + | chr4.2:31420428-31420447 | MS.gene065948:intron | 15.0% |
!! | TTCTATATCTAAAAAAAGTA+GGG | + | chr4.2:31422720-31422739 | MS.gene065948:intron | 15.0% |
!!! | ATAATATGTTTTATCTTTCA+TGG | + | chr4.2:31423128-31423147 | MS.gene065948:intron | 15.0% |
!!! | ATACATTTTTTTTATCTTTC+AGG | + | chr4.2:31423990-31424009 | MS.gene065948:intron | 15.0% |
!!! | ATGTTATATTTCTATGTATA+GGG | - | chr4.2:31421936-31421955 | None:intergenic | 15.0% |
!!! | GAATTTAAATGATAATTTTG+CGG | + | chr4.2:31419658-31419677 | MS.gene065948:intron | 15.0% |
!!! | GATTAACTTTAAAAGATTAA+AGG | - | chr4.2:31421662-31421681 | None:intergenic | 15.0% |
!!! | TAACATTTTTTTTCTTTGTT+AGG | - | chr4.2:31421012-31421031 | None:intergenic | 15.0% |
!!! | TACATTTTTTTTATCTTTCA+GGG | + | chr4.2:31423991-31424010 | MS.gene065948:intron | 15.0% |
!!! | TATGTTATATTTCTATGTAT+AGG | - | chr4.2:31421937-31421956 | None:intergenic | 15.0% |
!! | AAAATAATGACATTAATCCA+TGG | + | chr4.2:31420571-31420590 | MS.gene065948:CDS | 20.0% |
!! | AAAGATTAAAGGAAAAAACA+AGG | - | chr4.2:31421651-31421670 | None:intergenic | 20.0% |
!! | AAATAATGACATTAATCCAT+GGG | + | chr4.2:31420572-31420591 | MS.gene065948:CDS | 20.0% |
!! | AAGATTAAAGGAAAAAACAA+GGG | - | chr4.2:31421650-31421669 | None:intergenic | 20.0% |
!! | AATGATTCTATGACTAATTT+GGG | - | chr4.2:31423078-31423097 | None:intergenic | 20.0% |
!! | AATGTATTTAAAGACATGTA+AGG | - | chr4.2:31420719-31420738 | None:intergenic | 20.0% |
!! | ACTAAAACTTTATCTTGAAA+TGG | + | chr4.2:31421124-31421143 | MS.gene065948:intron | 20.0% |
!! | AGAAAAAAAATGTTATGAAG+AGG | + | chr4.2:31421017-31421036 | MS.gene065948:intron | 20.0% |
!! | ATGTATTTAAAGACATGTAA+GGG | - | chr4.2:31420718-31420737 | None:intergenic | 20.0% |
!! | ATGTCTTTAAATACATTTCA+GGG | + | chr4.2:31420722-31420741 | MS.gene065948:intron | 20.0% |
!! | ATTCATATAAAATTCACTCT+TGG | - | chr4.2:31420933-31420952 | None:intergenic | 20.0% |
!! | ATTTGATTAAAAGAATGTAC+TGG | - | chr4.2:31419763-31419782 | None:intergenic | 20.0% |
!! | CAATTATGTAGTTATCTTAT+TGG | + | chr4.2:31421518-31421537 | MS.gene065948:intron | 20.0% |
!! | CTTATGTAACTTATAATTTC+AGG | + | chr4.2:31420521-31420540 | MS.gene065948:intron | 20.0% |
!! | CTTCTATATCTAAAAAAAGT+AGG | + | chr4.2:31422719-31422738 | MS.gene065948:intron | 20.0% |
!! | GAATACAAGACATTAAAAAA+AGG | - | chr4.2:31421495-31421514 | None:intergenic | 20.0% |
!! | TAATGATTCTATGACTAATT+TGG | - | chr4.2:31423079-31423098 | None:intergenic | 20.0% |
!! | TATAATTCGAATTTGCAAAT+CGG | - | chr4.2:31420080-31420099 | None:intergenic | 20.0% |
!! | TCTATATCTAAAAAAAGTAG+GGG | + | chr4.2:31422721-31422740 | MS.gene065948:intron | 20.0% |
!! | TTAAAAAAGAATCATCTGAT+GGG | + | chr4.2:31424301-31424320 | MS.gene065948:CDS | 20.0% |
!!! | AATGAGTTTTCAATTTTCAA+AGG | + | chr4.2:31419266-31419285 | MS.gene065948:intron | 20.0% |
!!! | AATGTTGATAAACAAATTAC+AGG | + | chr4.2:31419994-31420013 | MS.gene065948:intron | 20.0% |
!!! | ACGTCAAATTTTGTAATTAA+AGG | - | chr4.2:31420636-31420655 | None:intergenic | 20.0% |
!!! | ATCAGATGATTCTTTTTTAA+CGG | - | chr4.2:31424301-31424320 | None:intergenic | 20.0% |
!!! | ATGGTAAATATATTTGTTAG+AGG | + | chr4.2:31420117-31420136 | MS.gene065948:intron | 20.0% |
!!! | ATTGTTTTCGTTATTTTGAA+GGG | + | chr4.2:31423857-31423876 | MS.gene065948:intron | 20.0% |
!!! | ATTTTCAAAGGTATTTGAAA+TGG | + | chr4.2:31419278-31419297 | MS.gene065948:intron | 20.0% |
!!! | ATTTTGATTTTACAAAACTG+AGG | - | chr4.2:31422583-31422602 | None:intergenic | 20.0% |
!!! | CACAAATCATTTTTTGAAAA+AGG | + | chr4.2:31419239-31419258 | MS.gene065948:intron | 20.0% |
!!! | CTACTTTTTTTAGATATAGA+AGG | - | chr4.2:31422721-31422740 | None:intergenic | 20.0% |
!!! | TAAAGACAATTATTTTGAGA+TGG | + | chr4.2:31420098-31420117 | MS.gene065948:intron | 20.0% |
!!! | TATTTTGTTTTTAAGGATGT+GGG | + | chr4.2:31422780-31422799 | MS.gene065948:intron | 20.0% |
!!! | TGGTAAATATATTTGTTAGA+GGG | + | chr4.2:31420118-31420137 | MS.gene065948:intron | 20.0% |
!!! | TGTAGTTCTAATTTTATGTT+TGG | + | chr4.2:31420244-31420263 | MS.gene065948:intron | 20.0% |
!!! | TGTTATATTTCTATGTATAG+GGG | - | chr4.2:31421935-31421954 | None:intergenic | 20.0% |
!!! | TTATCAACATTATAATTTGC+AGG | - | chr4.2:31419985-31420004 | None:intergenic | 20.0% |
!!! | TTATTTTGTTTTTAAGGATG+TGG | + | chr4.2:31422779-31422798 | MS.gene065948:intron | 20.0% |
!!! | TTTTCAAAGGTATTTGAAAT+GGG | + | chr4.2:31419279-31419298 | MS.gene065948:intron | 20.0% |
! | AAAGTTGAAAACAAAAGGAA+GGG | - | chr4.2:31424506-31424525 | None:intergenic | 25.0% |
! | AAGGATTTATCTTCTTCAAA+AGG | - | chr4.2:31420617-31420636 | None:intergenic | 25.0% |
! | ACTAAAACCATAGCAATTAT+AGG | - | chr4.2:31419185-31419204 | None:intergenic | 25.0% |
! | ACTATGCTAAAAGTTCAATT+TGG | - | chr4.2:31423192-31423211 | None:intergenic | 25.0% |
! | AGGAATAAAGTTATAGAGAT+AGG | + | chr4.2:31420809-31420828 | MS.gene065948:CDS | 25.0% |
! | AGTAACAGTACAAAAACAAT+GGG | - | chr4.2:31422756-31422775 | None:intergenic | 25.0% |
! | ATATAACATATTGTCTCATC+AGG | + | chr4.2:31421947-31421966 | MS.gene065948:intron | 25.0% |
! | ATCTGGGAAACTAATAAATT+TGG | - | chr4.2:31419794-31419813 | None:intergenic | 25.0% |
! | CAATTATAGGAAACTGTATT+TGG | - | chr4.2:31419172-31419191 | None:intergenic | 25.0% |
! | CATGTCTTTAAATACATTTC+AGG | + | chr4.2:31420721-31420740 | MS.gene065948:intron | 25.0% |
! | CTAAAAATTGAACTGAAACA+GGG | - | chr4.2:31420476-31420495 | None:intergenic | 25.0% |
! | GAATAGTGATATATAAAGGT+TGG | - | chr4.2:31420424-31420443 | None:intergenic | 25.0% |
! | GTATGTATTAACTCTTCTTA+TGG | + | chr4.2:31421100-31421119 | MS.gene065948:intron | 25.0% |
! | GTTAAAAAAGAATCATCTGA+TGG | + | chr4.2:31424300-31424319 | MS.gene065948:CDS | 25.0% |
! | TAAAAAAGAATCATCTGATG+GGG | + | chr4.2:31424302-31424321 | MS.gene065948:CDS | 25.0% |
! | TAAAATCAATTTGGAAGCTA+TGG | + | chr4.2:31424468-31424487 | MS.gene065948:intron | 25.0% |
! | TAAAGTTGAAAACAAAAGGA+AGG | - | chr4.2:31424507-31424526 | None:intergenic | 25.0% |
! | TAAGAAGACATGCATAAAAA+AGG | + | chr4.2:31422941-31422960 | MS.gene065948:intron | 25.0% |
! | TAAGTTTAAGCATGTAACAA+AGG | - | chr4.2:31420672-31420691 | None:intergenic | 25.0% |
! | TAGTAACAGTACAAAAACAA+TGG | - | chr4.2:31422757-31422776 | None:intergenic | 25.0% |
! | TATAAAACACCACGAAAAAA+TGG | - | chr4.2:31420178-31420197 | None:intergenic | 25.0% |
! | TCTAAAAATTGAACTGAAAC+AGG | - | chr4.2:31420477-31420496 | None:intergenic | 25.0% |
! | TGGAATTAAGTACATATCAA+GGG | + | chr4.2:31421802-31421821 | MS.gene065948:intron | 25.0% |
! | TGTCTTTAAATACATTTCAG+GGG | + | chr4.2:31420723-31420742 | MS.gene065948:intron | 25.0% |
! | TTCATCTAAATTCAGTTGTA+TGG | + | chr4.2:31423315-31423334 | MS.gene065948:intron | 25.0% |
! | TTGGATGTAACTATAAAATG+AGG | - | chr4.2:31424369-31424388 | None:intergenic | 25.0% |
! | TTTCAAAGAATTGCTAATGT+TGG | - | chr4.2:31419898-31419917 | None:intergenic | 25.0% |
!! | ACTTTTGTACTCTATGATTA+GGG | + | chr4.2:31424394-31424413 | MS.gene065948:intron | 25.0% |
!! | GTTATATTTCTATGTATAGG+GGG | - | chr4.2:31421934-31421953 | None:intergenic | 25.0% |
!! | TACTTTTGTACTCTATGATT+AGG | + | chr4.2:31424393-31424412 | MS.gene065948:intron | 25.0% |
!! | TCTGTAATTATTTAGCTCAT+GGG | + | chr4.2:31422256-31422275 | MS.gene065948:CDS | 25.0% |
!! | TGCTTTTGATATTGCAAAAT+GGG | + | chr4.2:31419101-31419120 | MS.gene065948:intron | 25.0% |
!! | TTATATTTCTATGTATAGGG+GGG | - | chr4.2:31421933-31421952 | None:intergenic | 25.0% |
!!! | ATACCATTTTGTTATGAGAT+CGG | + | chr4.2:31420977-31420996 | MS.gene065948:intron | 25.0% |
!!! | ATTTCTAGTAGATCTTGAAT+GGG | + | chr4.2:31419470-31419489 | MS.gene065948:intron | 25.0% |
!!! | ATTTTGACAGTGTTTTACAA+AGG | + | chr4.2:31418929-31418948 | MS.gene065948:CDS | 25.0% |
!!! | ATTTTGTTTTTAAGGATGTG+GGG | + | chr4.2:31422781-31422800 | MS.gene065948:intron | 25.0% |
!!! | CAAAAGTGTTAATCATTTAC+TGG | + | chr4.2:31423597-31423616 | MS.gene065948:intron | 25.0% |
!!! | CAATTAATTTGCATCTATCA+AGG | + | chr4.2:31419306-31419325 | MS.gene065948:intron | 25.0% |
!!! | CATAATGATTTGTTAGGTAA+AGG | + | chr4.2:31419127-31419146 | MS.gene065948:intron | 25.0% |
!!! | CATTGTTTTCGTTATTTTGA+AGG | + | chr4.2:31423856-31423875 | MS.gene065948:intron | 25.0% |
!!! | CCAAATTGATTTTACCAAAT+CGG | - | chr4.2:31424462-31424481 | None:intergenic | 25.0% |
!!! | GTAAAGTATCATCCTTATTT+TGG | + | chr4.2:31422827-31422846 | MS.gene065948:intron | 25.0% |
!!! | TATTTCTAGTAGATCTTGAA+TGG | + | chr4.2:31419469-31419488 | MS.gene065948:intron | 25.0% |
!!! | TCTGTTTTATTCTGATTTGT+TGG | + | chr4.2:31420198-31420217 | MS.gene065948:intron | 25.0% |
!!! | TGTATCATTTTGATGATTCA+AGG | + | chr4.2:31423165-31423184 | MS.gene065948:intron | 25.0% |
!!! | TTGGCTCAATTTTTAACTAT+GGG | - | chr4.2:31420405-31420424 | None:intergenic | 25.0% |
!!! | TTGTTTTCGTTATTTTGAAG+GGG | + | chr4.2:31423858-31423877 | MS.gene065948:intron | 25.0% |
!!! | TTTTTTAACGGTTTCCATAT+AGG | - | chr4.2:31424289-31424308 | None:intergenic | 25.0% |
AAAAAAGAATCATCTGATGG+GGG | + | chr4.2:31424303-31424322 | MS.gene065948:CDS | 30.0% | |
AAATGATCAACGTAAGAAGT+TGG | - | chr4.2:31423288-31423307 | None:intergenic | 30.0% | |
AACAAGAGCAATTGTTTAAC+TGG | - | chr4.2:31421758-31421777 | None:intergenic | 30.0% | |
AAGTTAAAGTATGGTGGTAT+AGG | + | chr4.2:31423625-31423644 | MS.gene065948:intron | 30.0% | |
AATAACAAACTTGCATCCTT+CGG | + | chr4.2:31420024-31420043 | MS.gene065948:intron | 30.0% | |
ACAGTTTCCTATAATTGCTA+TGG | + | chr4.2:31419175-31419194 | MS.gene065948:intron | 30.0% | |
ACTTTCTTGACATAAAGCTT+TGG | - | chr4.2:31419951-31419970 | None:intergenic | 30.0% | |
AGAAACTCTACTGAGAAATA+AGG | - | chr4.2:31420322-31420341 | None:intergenic | 30.0% | |
AGACAAATTATCGAGGTAAA+AGG | - | chr4.2:31422629-31422648 | None:intergenic | 30.0% | |
AGATAATGAGGGAAATCAAA+AGG | - | chr4.2:31422302-31422321 | None:intergenic | 30.0% | |
ATGAGGAATATACCGTTTAA+AGG | - | chr4.2:31424352-31424371 | None:intergenic | 30.0% | |
ATGGTTTACTCTCTTACATT+TGG | + | chr4.2:31423256-31423275 | MS.gene065948:intron | 30.0% | |
ATTGAAACTTTGCATGATGT+TGG | + | chr4.2:31422453-31422472 | MS.gene065948:CDS | 30.0% | |
CAATATGATTTCATACCTTC+TGG | - | chr4.2:31420368-31420387 | None:intergenic | 30.0% | |
CGTAAATTCTTAAAGAGTCT+TGG | - | chr4.2:31419855-31419874 | None:intergenic | 30.0% | |
CTAAATTCAGTTGTATGGAA+TGG | + | chr4.2:31423320-31423339 | MS.gene065948:intron | 30.0% | |
GAGTGAATCTTTAAACAAAG+TGG | + | chr4.2:31419406-31419425 | MS.gene065948:intron | 30.0% | |
GGTACATTTGTCAGAATATT+TGG | + | chr4.2:31419679-31419698 | MS.gene065948:intron | 30.0% | |
GTAATGAAGTAGATGTATCT+GGG | - | chr4.2:31419810-31419829 | None:intergenic | 30.0% | |
GTGGAATTAAGTACATATCA+AGG | + | chr4.2:31421801-31421820 | MS.gene065948:intron | 30.0% | |
TAACAGAAGAGCAACTTTAA+AGG | - | chr4.2:31424203-31424222 | None:intergenic | 30.0% | |
TAACGAATAAGCAGATTATC+AGG | - | chr4.2:31422501-31422520 | None:intergenic | 30.0% | |
TACAATACACCAAAAATGGT+GGG | + | chr4.2:31421420-31421439 | MS.gene065948:intron | 30.0% | |
TAGAGTACAAAAGTAGCAAT+TGG | - | chr4.2:31424388-31424407 | None:intergenic | 30.0% | |
TAGTTGTCCTATCCAAAATA+AGG | - | chr4.2:31422842-31422861 | None:intergenic | 30.0% | |
TATAAGATTTAGTGCTCGAA+CGG | - | chr4.2:31420751-31420770 | None:intergenic | 30.0% | |
TATGTACTTAATTCCACCTT+TGG | - | chr4.2:31421798-31421817 | None:intergenic | 30.0% | |
TCAACGTATAAAGAAACTCA+AGG | + | chr4.2:31424690-31424709 | MS.gene065948:CDS | 30.0% | |
TGAAAAGAGACAAATTATCG+AGG | - | chr4.2:31422636-31422655 | None:intergenic | 30.0% | |
TGAACAGATCTTGATGTATT+CGG | - | chr4.2:31422907-31422926 | None:intergenic | 30.0% | |
TGAGGAATATACCGTTTAAA+GGG | - | chr4.2:31424351-31424370 | None:intergenic | 30.0% | |
TGTAAAAAACAGGGTAAGTA+AGG | + | chr4.2:31421392-31421411 | MS.gene065948:intron | 30.0% | |
TTATAAAGAATCTGCTACGT+TGG | + | chr4.2:31420548-31420567 | MS.gene065948:CDS | 30.0% | |
TTCAACAGAAAATTCTATGC+AGG | + | chr4.2:31422347-31422366 | MS.gene065948:intron | 30.0% | |
TTGAGTTTCTTTATACGTTG+AGG | - | chr4.2:31424691-31424710 | None:intergenic | 30.0% | |
TTGCATGTCTAATTCATATC+TGG | + | chr4.2:31421067-31421086 | MS.gene065948:intron | 30.0% | |
TTGTTGTATCAAACAGTTAC+TGG | + | chr4.2:31424548-31424567 | MS.gene065948:intron | 30.0% | |
TTTGGTTAATTCAGAAAGTG+TGG | - | chr4.2:31419933-31419952 | None:intergenic | 30.0% | |
! | CTCTTAGTGTTGTTAAATAG+TGG | - | chr4.2:31421239-31421258 | None:intergenic | 30.0% |
! | CTTTTGTACTCTATGATTAG+GGG | + | chr4.2:31424395-31424414 | MS.gene065948:intron | 30.0% |
! | GTCTGTAATTATTTAGCTCA+TGG | + | chr4.2:31422255-31422274 | MS.gene065948:CDS | 30.0% |
! | TATTGATTGCAGATTTCAGA+GGG | + | chr4.2:31421196-31421215 | MS.gene065948:intron | 30.0% |
! | TTATTGATTGCAGATTTCAG+AGG | + | chr4.2:31421195-31421214 | MS.gene065948:intron | 30.0% |
! | TTGGTTAATTCAGAAAGTGT+GGG | - | chr4.2:31419932-31419951 | None:intergenic | 30.0% |
! | TTTCTAGTAGATCTTGAATG+GGG | + | chr4.2:31419471-31419490 | MS.gene065948:intron | 30.0% |
!! | AATGTACTGGTTCAATTGAT+GGG | - | chr4.2:31419750-31419769 | None:intergenic | 30.0% |
!! | ATTATTTTATTCACAGCCGA+AGG | - | chr4.2:31420043-31420062 | None:intergenic | 30.0% |
!! | CCGATTTGGTAAAATCAATT+TGG | + | chr4.2:31424459-31424478 | MS.gene065948:intron | 30.0% |
!! | CTGCTTTTGATATTGCAAAA+TGG | + | chr4.2:31419100-31419119 | MS.gene065948:intron | 30.0% |
!! | GTTGGCTCAATTTTTAACTA+TGG | - | chr4.2:31420406-31420425 | None:intergenic | 30.0% |
!! | TACCATTTTGTTATGAGATC+GGG | + | chr4.2:31420978-31420997 | MS.gene065948:intron | 30.0% |
!! | TAGAGTTTCTGAAATATGCA+AGG | + | chr4.2:31420332-31420351 | MS.gene065948:CDS | 30.0% |
!!! | GCATGTTTTTTTGAAGCAAA+GGG | + | chr4.2:31419004-31419023 | MS.gene065948:CDS | 30.0% |
!!! | GTATCATCCTTATTTTGGAT+AGG | + | chr4.2:31422832-31422851 | MS.gene065948:intron | 30.0% |
!!! | TGCATGTTTTTTTGAAGCAA+AGG | + | chr4.2:31419003-31419022 | MS.gene065948:CDS | 30.0% |
AAAGATTCACTCACTTCTCA+TGG | - | chr4.2:31419398-31419417 | None:intergenic | 35.0% | |
AAATCGAACGTGCTATGAAA+TGG | + | chr4.2:31421587-31421606 | MS.gene065948:intron | 35.0% | |
AACAAGATCCTACAGTTACA+TGG | - | chr4.2:31421545-31421564 | None:intergenic | 35.0% | |
AATCCTTCTGCTAGTAAAAG+TGG | - | chr4.2:31423668-31423687 | None:intergenic | 35.0% | |
AATCGAACGTGCTATGAAAT+GGG | + | chr4.2:31421588-31421607 | MS.gene065948:intron | 35.0% | |
AATTATCGAGGTAAAAGGCA+AGG | - | chr4.2:31422624-31422643 | None:intergenic | 35.0% | |
ACATTAAAAAAAGGGCAACC+CGG | - | chr4.2:31421486-31421505 | None:intergenic | 35.0% | |
ACCACAAATAGCATATATGC+CGG | + | chr4.2:31423394-31423413 | MS.gene065948:intron | 35.0% | |
ACTTATAAACACTGAGAGGA+TGG | + | chr4.2:31419627-31419646 | MS.gene065948:intron | 35.0% | |
AGCAACTTATAAACACTGAG+AGG | + | chr4.2:31419623-31419642 | MS.gene065948:intron | 35.0% | |
AGCCTCTTGTGTAAAAAACA+GGG | + | chr4.2:31421383-31421402 | MS.gene065948:intron | 35.0% | |
AGTTAGAATTCCTTGACTCA+TGG | + | chr4.2:31419202-31419221 | MS.gene065948:intron | 35.0% | |
ATACCCTCAAAATTAAGACG+GGG | - | chr4.2:31422697-31422716 | None:intergenic | 35.0% | |
ATCAACTCATATGTGGTCAT+AGG | + | chr4.2:31422375-31422394 | MS.gene065948:CDS | 35.0% | |
ATCTGCTTATTCGTTATGCT+AGG | + | chr4.2:31422505-31422524 | MS.gene065948:CDS | 35.0% | |
ATCTTTCAGAGGTCAAACTA+TGG | + | chr4.2:31422189-31422208 | MS.gene065948:intron | 35.0% | |
ATTATCGAGGTAAAAGGCAA+GGG | - | chr4.2:31422623-31422642 | None:intergenic | 35.0% | |
CAATGAGTACTATCCACAAA+TGG | - | chr4.2:31423841-31423860 | None:intergenic | 35.0% | |
CAGTTTCAGGACTAAAATGA+TGG | + | chr4.2:31423237-31423256 | MS.gene065948:intron | 35.0% | |
CATACCCTCAAAATTAAGAC+GGG | - | chr4.2:31422698-31422717 | None:intergenic | 35.0% | |
CATTCAAATGCACGTCAAAA+CGG | - | chr4.2:31423754-31423773 | None:intergenic | 35.0% | |
CGTAATGAAGTAGATGTATC+TGG | - | chr4.2:31419811-31419830 | None:intergenic | 35.0% | |
CTAATTTCTAAGCATCCATG+TGG | + | chr4.2:31423351-31423370 | MS.gene065948:intron | 35.0% | |
CTGACATCTTAATCTTTCAG+AGG | + | chr4.2:31422178-31422197 | MS.gene065948:intron | 35.0% | |
CTGGAGTGAAAGTTAAAGTA+TGG | + | chr4.2:31423616-31423635 | MS.gene065948:intron | 35.0% | |
GAAATGCAGAGCCAATTAAA+TGG | + | chr4.2:31420280-31420299 | MS.gene065948:intron | 35.0% | |
GAATAGTGAGTGTTTCTTGT+TGG | + | chr4.2:31419435-31419454 | MS.gene065948:intron | 35.0% | |
GAGTGAAAGTTAAAGTATGG+TGG | + | chr4.2:31423619-31423638 | MS.gene065948:intron | 35.0% | |
GATACATGTAAAACTCCCAA+GGG | - | chr4.2:31422011-31422030 | None:intergenic | 35.0% | |
GATACTTTACTAGATGCAGA+GGG | - | chr4.2:31422817-31422836 | None:intergenic | 35.0% | |
GATCATACACACACAGAAAA+TGG | - | chr4.2:31420904-31420923 | None:intergenic | 35.0% | |
GATGCTGCATAATACCTATA+TGG | + | chr4.2:31424272-31424291 | MS.gene065948:CDS | 35.0% | |
GATGTTGAACGAGATAATGA+GGG | - | chr4.2:31422313-31422332 | None:intergenic | 35.0% | |
GCATACCCTCAAAATTAAGA+CGG | - | chr4.2:31422699-31422718 | None:intergenic | 35.0% | |
GCTTCAACACAATGTAAAAC+TGG | + | chr4.2:31419344-31419363 | MS.gene065948:intron | 35.0% | |
GTACAATACACCAAAAATGG+TGG | + | chr4.2:31421419-31421438 | MS.gene065948:intron | 35.0% | |
GTAGATGTTCATAGAAAAGC+AGG | - | chr4.2:31422093-31422112 | None:intergenic | 35.0% | |
GTGATGTCTCTAATTGAATC+CGG | - | chr4.2:31423416-31423435 | None:intergenic | 35.0% | |
GTTAGAATTCCTTGACTCAT+GGG | + | chr4.2:31419203-31419222 | MS.gene065948:intron | 35.0% | |
GTTGCTGATATCACAAACAA+CGG | - | chr4.2:31419609-31419628 | None:intergenic | 35.0% | |
TAATCTCTTTCCAGATCACA+CGG | + | chr4.2:31424050-31424069 | MS.gene065948:CDS | 35.0% | |
TATTTGGGTGATACACATCT+TGG | + | chr4.2:31419494-31419513 | MS.gene065948:intron | 35.0% | |
TCGAGCACTAAATCTTATAC+AGG | + | chr4.2:31420752-31420771 | MS.gene065948:CDS | 35.0% | |
TGATACTTTACTAGATGCAG+AGG | - | chr4.2:31422818-31422837 | None:intergenic | 35.0% | |
TGATGTTGAACGAGATAATG+AGG | - | chr4.2:31422314-31422333 | None:intergenic | 35.0% | |
TGCATTCTTCAAAGTGGATA+AGG | - | chr4.2:31420786-31420805 | None:intergenic | 35.0% | |
TGCGTACAATACACCAAAAA+TGG | + | chr4.2:31421416-31421435 | MS.gene065948:intron | 35.0% | |
TGTGGTCATAGGAAAATTCA+TGG | + | chr4.2:31422386-31422405 | MS.gene065948:CDS | 35.0% | |
TTATTGGTCCATGTAACTGT+AGG | + | chr4.2:31421534-31421553 | MS.gene065948:intron | 35.0% | |
TTCTGTTATCACTTGTCAAC+AGG | + | chr4.2:31424215-31424234 | MS.gene065948:intron | 35.0% | |
! | AAGGTGACCGAATTTTTACT+AGG | - | chr4.2:31424425-31424444 | None:intergenic | 35.0% |
! | AGATCTTGAATGGGGTATTT+GGG | + | chr4.2:31419479-31419498 | MS.gene065948:intron | 35.0% |
! | AGGTTTTGCTCAAGTATACA+AGG | + | chr4.2:31421840-31421859 | MS.gene065948:CDS | 35.0% |
! | CACATAAAGTGAAGCATCAT+TGG | - | chr4.2:31418978-31418997 | None:intergenic | 35.0% |
! | GAACAGTTTCTAGAAGAGTT+AGG | + | chr4.2:31421690-31421709 | MS.gene065948:intron | 35.0% |
! | GATTTTACCAAATCGGTAGA+GGG | - | chr4.2:31424455-31424474 | None:intergenic | 35.0% |
! | GTAGCTTTTATCTCAACCAA+TGG | - | chr4.2:31423710-31423729 | None:intergenic | 35.0% |
! | TAGATCTTGAATGGGGTATT+TGG | + | chr4.2:31419478-31419497 | MS.gene065948:intron | 35.0% |
! | TCATGGTGTTTTATGACCAT+TGG | + | chr4.2:31423691-31423710 | MS.gene065948:intron | 35.0% |
! | TGATTTTACCAAATCGGTAG+AGG | - | chr4.2:31424456-31424475 | None:intergenic | 35.0% |
! | TTCATAGAAAAGCAGGTTGA+TGG | - | chr4.2:31422086-31422105 | None:intergenic | 35.0% |
! | TTTCCCCGTCTTAATTTTGA+GGG | + | chr4.2:31422691-31422710 | MS.gene065948:intron | 35.0% |
! | TTTTCCCCGTCTTAATTTTG+AGG | + | chr4.2:31422690-31422709 | MS.gene065948:intron | 35.0% |
!! | GAATGTACTGGTTCAATTGA+TGG | - | chr4.2:31419751-31419770 | None:intergenic | 35.0% |
!! | GGGTAGCATAATGATTTGTT+AGG | + | chr4.2:31419121-31419140 | MS.gene065948:intron | 35.0% |
!! | TTTCCACTTTTACTAGCAGA+AGG | + | chr4.2:31423662-31423681 | MS.gene065948:intron | 35.0% |
!!! | GGTGTGAGATTTTTTGCATT+AGG | + | chr4.2:31420219-31420238 | MS.gene065948:intron | 35.0% |
!!! | TACCCTGTTTTTTACACAAG+AGG | - | chr4.2:31421388-31421407 | None:intergenic | 35.0% |
!!! | TCAGGTTGCATTTTGAAACT+TGG | + | chr4.2:31421965-31421984 | MS.gene065948:intron | 35.0% |
AAGATGCTTAATGACTACCC+TGG | + | chr4.2:31424601-31424620 | MS.gene065948:CDS | 40.0% | |
ACAAAAACCAGCTTTCCCTT+GGG | + | chr4.2:31421993-31422012 | MS.gene065948:CDS | 40.0% | |
ACCTTAATGTCTCGTAACCT+TGG | + | chr4.2:31421309-31421328 | MS.gene065948:intron | 40.0% | |
AGAGAGAATGGAATTTCCAG+TGG | + | chr4.2:31422985-31423004 | MS.gene065948:intron | 40.0% | |
AGATCTTGATGTATTCGGAC+AGG | - | chr4.2:31422902-31422921 | None:intergenic | 40.0% | |
ATACCGTTTAAAGGGTAGTC+TGG | - | chr4.2:31424343-31424362 | None:intergenic | 40.0% | |
ATCTTGATGTATTCGGACAG+GGG | - | chr4.2:31422900-31422919 | None:intergenic | 40.0% | |
ATTGAACTGAAACAGGGTTG+AGG | - | chr4.2:31420470-31420489 | None:intergenic | 40.0% | |
ATTTCCATAAGCTGCTTCCT+TGG | + | chr4.2:31421723-31421742 | MS.gene065948:intron | 40.0% | |
CAAAAGGTCATTCAGAGTAG+AGG | - | chr4.2:31420601-31420620 | None:intergenic | 40.0% | |
CACCCGATCTCATAACAAAA+TGG | - | chr4.2:31420983-31421002 | None:intergenic | 40.0% | |
CAGCCTCTTGTGTAAAAAAC+AGG | + | chr4.2:31421382-31421401 | MS.gene065948:intron | 40.0% | |
CATTTCCAGGTTAGTGCTTT+GGG | + | chr4.2:31419063-31419082 | MS.gene065948:intron | 40.0% | |
CCACTCATAGAAAGAGAGAA+TGG | + | chr4.2:31422973-31422992 | MS.gene065948:intron | 40.0% | |
CCAGATCACACGGTATTTAA+GGG | + | chr4.2:31424060-31424079 | MS.gene065948:CDS | 40.0% | |
CCATTCTCTCTTTCTATGAG+TGG | - | chr4.2:31422976-31422995 | None:intergenic | 40.0% | |
CCTTGATGCATTCTTCAAAG+TGG | - | chr4.2:31420792-31420811 | None:intergenic | 40.0% | |
CGATACATGTAAAACTCCCA+AGG | - | chr4.2:31422012-31422031 | None:intergenic | 40.0% | |
CGGTATTTAAGGGAGATTGT+AGG | + | chr4.2:31424070-31424089 | MS.gene065948:CDS | 40.0% | |
CTAGCAGAAGGATTTACTCA+TGG | + | chr4.2:31423674-31423693 | MS.gene065948:intron | 40.0% | |
CTCTGCATTTCTGTCAAACA+TGG | - | chr4.2:31420271-31420290 | None:intergenic | 40.0% | |
GAGAGAATGGAATTTCCAGT+GGG | + | chr4.2:31422986-31423005 | MS.gene065948:intron | 40.0% | |
GATCTTGATGTATTCGGACA+GGG | - | chr4.2:31422901-31422920 | None:intergenic | 40.0% | |
GCAACAACTTCCTATCATCA+TGG | - | chr4.2:31424627-31424646 | None:intergenic | 40.0% | |
GCCAATTAAATGGTTGGAGA+AGG | + | chr4.2:31420290-31420309 | MS.gene065948:CDS | 40.0% | |
GCCTTCTCCAACCATTTAAT+TGG | - | chr4.2:31420294-31420313 | None:intergenic | 40.0% | |
GGATGTCATCAACTCATATG+TGG | + | chr4.2:31422368-31422387 | MS.gene065948:intron | 40.0% | |
GGGACCTCCTAGTAAAAATT+CGG | + | chr4.2:31424415-31424434 | MS.gene065948:intron | 40.0% | |
GTAGACACAATTATGCCACA+TGG | - | chr4.2:31423369-31423388 | None:intergenic | 40.0% | |
GTTGTTGTCAAGTGACTGAA+AGG | + | chr4.2:31421345-31421364 | MS.gene065948:intron | 40.0% | |
TACAAAAACCAGCTTTCCCT+TGG | + | chr4.2:31421992-31422011 | MS.gene065948:CDS | 40.0% | |
TACACTTTCAGGGACCAAAA+TGG | - | chr4.2:31423019-31423038 | None:intergenic | 40.0% | |
TACCGTTTAAAGGGTAGTCT+GGG | - | chr4.2:31424342-31424361 | None:intergenic | 40.0% | |
TCACTCACTTCTCATGGATT+TGG | - | chr4.2:31419392-31419411 | None:intergenic | 40.0% | |
TCCAGATCACACGGTATTTA+AGG | + | chr4.2:31424059-31424078 | MS.gene065948:CDS | 40.0% | |
TGACTCACCTGAAATTTCCA+CGG | - | chr4.2:31424135-31424154 | None:intergenic | 40.0% | |
TGATGAAGTTGTGGCACTAA+AGG | + | chr4.2:31421882-31421901 | MS.gene065948:CDS | 40.0% | |
TGATGATAGGAAGTTGTTGC+AGG | + | chr4.2:31424627-31424646 | MS.gene065948:CDS | 40.0% | |
TGCAGAGCCAATTAAATGGT+TGG | + | chr4.2:31420284-31420303 | MS.gene065948:CDS | 40.0% | |
TTAACTGGAACTTTCGTCCA+AGG | - | chr4.2:31421743-31421762 | None:intergenic | 40.0% | |
TTCCCAGACTACCCTTTAAA+CGG | + | chr4.2:31424337-31424356 | MS.gene065948:CDS | 40.0% | |
TTGGGTTTATAGCCCAGTTT+CGG | - | chr4.2:31423060-31423079 | None:intergenic | 40.0% | |
TTTAGTGCCACAACTTCATC+AGG | - | chr4.2:31421883-31421902 | None:intergenic | 40.0% | |
! | AAGGATCTTGTTGATGGGAT+AGG | - | chr4.2:31419726-31419745 | None:intergenic | 40.0% |
! | AGATTCGAGTATTGCTGTAC+AGG | + | chr4.2:31422869-31422888 | MS.gene065948:intron | 40.0% |
! | ATTCGAGTATTGCTGTACAG+GGG | + | chr4.2:31422871-31422890 | MS.gene065948:intron | 40.0% |
! | CCACTTTGAAGAATGCATCA+AGG | + | chr4.2:31420789-31420808 | MS.gene065948:CDS | 40.0% |
! | GATTCGAGTATTGCTGTACA+GGG | + | chr4.2:31422870-31422889 | MS.gene065948:intron | 40.0% |
! | GCTTAGATGATTGCCATTTG+TGG | + | chr4.2:31423825-31423844 | MS.gene065948:intron | 40.0% |
! | GTGACCGAATTTTTACTAGG+AGG | - | chr4.2:31424422-31424441 | None:intergenic | 40.0% |
! | GTGTTGTTAAATAGTGGCCA+TGG | - | chr4.2:31421233-31421252 | None:intergenic | 40.0% |
! | TCAACGTAAGAAGTTGGTTG+TGG | - | chr4.2:31423282-31423301 | None:intergenic | 40.0% |
! | TCCGGCATATATGCTATTTG+TGG | - | chr4.2:31423398-31423417 | None:intergenic | 40.0% |
! | TGTCACTTATGTCCGAAACT+GGG | + | chr4.2:31423045-31423064 | MS.gene065948:intron | 40.0% |
! | TTTTCGATGCATTGAGATGC+AGG | + | chr4.2:31424101-31424120 | MS.gene065948:CDS | 40.0% |
!! | CATGATGTTGGCTTGATTCA+TGG | + | chr4.2:31422465-31422484 | MS.gene065948:CDS | 40.0% |
!! | CTTCAAAAGCATCTACTGAG+AGG | - | chr4.2:31423577-31423596 | None:intergenic | 40.0% |
!!! | ACAAAGGCTCCATTTTTTCG+TGG | + | chr4.2:31420166-31420185 | MS.gene065948:intron | 40.0% |
!!! | GCTGCACTAGTTTTGTAAGA+GGG | - | chr4.2:31423472-31423491 | None:intergenic | 40.0% |
!!! | TGCTGCACTAGTTTTGTAAG+AGG | - | chr4.2:31423473-31423492 | None:intergenic | 40.0% |
AACAGGGTTGAGGAAACAAG+TGG | - | chr4.2:31420460-31420479 | None:intergenic | 45.0% | |
AACTTCCTATCATCATGGCC+AGG | - | chr4.2:31424622-31424641 | None:intergenic | 45.0% | |
AAGGGAGATTGTAGGACTTC+TGG | + | chr4.2:31424078-31424097 | MS.gene065948:CDS | 45.0% | |
ACTTCCTATCATCATGGCCA+GGG | - | chr4.2:31424621-31424640 | None:intergenic | 45.0% | |
ACTTTCAGGGACCAAAATGG+TGG | - | chr4.2:31423016-31423035 | None:intergenic | 45.0% | |
AGAGCTGATATAGTCCTGGA+AGG | - | chr4.2:31424665-31424684 | None:intergenic | 45.0% | |
AGAGGGCAAAAAATCTGCCA+TGG | + | chr4.2:31421213-31421232 | MS.gene065948:intron | 45.0% | |
AGTTGTGGCACTAAAGGTGA+TGG | + | chr4.2:31421888-31421907 | MS.gene065948:intron | 45.0% | |
ATCGGTAGAGGGAGACTAAA+AGG | - | chr4.2:31424444-31424463 | None:intergenic | 45.0% | |
ATGGGCAAGGATCTTGTTGA+TGG | - | chr4.2:31419732-31419751 | None:intergenic | 45.0% | |
CAAAATGGTGGTTTACCCAC+TGG | - | chr4.2:31423004-31423023 | None:intergenic | 45.0% | |
CAGTGATCCTGATGAAGTTG+TGG | + | chr4.2:31421873-31421892 | MS.gene065948:CDS | 45.0% | |
CCCTTAAATACCGTGTGATC+TGG | - | chr4.2:31424063-31424082 | None:intergenic | 45.0% | |
CTAAGAACCCATCTTCTGTG+AGG | - | chr4.2:31423887-31423906 | None:intergenic | 45.0% | |
GACAGCATCGTACACTTTCA+GGG | - | chr4.2:31423029-31423048 | None:intergenic | 45.0% | |
GATCAGAGCTGATATAGTCC+TGG | - | chr4.2:31424669-31424688 | None:intergenic | 45.0% | |
GCATTTCCAGGTTAGTGCTT+TGG | + | chr4.2:31419062-31419081 | MS.gene065948:intron | 45.0% | |
GCCAAGGTTACGAGACATTA+AGG | - | chr4.2:31421313-31421332 | None:intergenic | 45.0% | |
GCTGACACCATCTATAAGCT+CGG | + | chr4.2:31419040-31419059 | MS.gene065948:CDS | 45.0% | |
GGAAATGCCGAGCTTATAGA+TGG | - | chr4.2:31419050-31419069 | None:intergenic | 45.0% | |
GGAATTGAAGAAGTCCTTCC+AGG | + | chr4.2:31424648-31424667 | MS.gene065948:CDS | 45.0% | |
GTCAAGTGACTGAAAGGTCA+CGG | + | chr4.2:31421351-31421370 | MS.gene065948:intron | 45.0% | |
TAAAACTCCCAAGGGAAAGC+TGG | - | chr4.2:31422003-31422022 | None:intergenic | 45.0% | |
TCAAGTGACTGAAAGGTCAC+GGG | + | chr4.2:31421352-31421371 | MS.gene065948:intron | 45.0% | |
TCGTATGAACAACACCGCAA+AGG | - | chr4.2:31424254-31424273 | None:intergenic | 45.0% | |
TCTATAAGCTCGGCATTTCC+AGG | + | chr4.2:31419050-31419069 | MS.gene065948:CDS | 45.0% | |
TGACAGCACACTACAGTTTC+AGG | + | chr4.2:31423224-31423243 | MS.gene065948:intron | 45.0% | |
TGACAGCATCGTACACTTTC+AGG | - | chr4.2:31423030-31423049 | None:intergenic | 45.0% | |
TGGGCAAGGATCTTGTTGAT+GGG | - | chr4.2:31419731-31419750 | None:intergenic | 45.0% | |
TGGGTGATACACATCTTGGA+TGG | + | chr4.2:31419498-31419517 | MS.gene065948:intron | 45.0% | |
TGTCAACAGGCAGATGCATA+TGG | + | chr4.2:31424228-31424247 | MS.gene065948:intron | 45.0% | |
TGTGTGTTTCCCATGAGTCA+AGG | - | chr4.2:31419215-31419234 | None:intergenic | 45.0% | |
TGTTGGATGATCAGTTCAGC+TGG | - | chr4.2:31419881-31419900 | None:intergenic | 45.0% | |
TTAGAGGGTTTACGTAGACG+TGG | + | chr4.2:31420133-31420152 | MS.gene065948:intron | 45.0% | |
! | ACTGGTTCAATTGATGGGCA+AGG | - | chr4.2:31419745-31419764 | None:intergenic | 45.0% |
! | ACTGGTTTCATGAAACACCG+AGG | + | chr4.2:31419362-31419381 | MS.gene065948:intron | 45.0% |
! | ACTGTAGTGTGCTGTCACTT+TGG | - | chr4.2:31423221-31423240 | None:intergenic | 45.0% |
! | CAACTTTATCGATTGCGCCA+AGG | - | chr4.2:31421329-31421348 | None:intergenic | 45.0% |
! | CAGTGGGTAAACCACCATTT+TGG | + | chr4.2:31423002-31423021 | MS.gene065948:intron | 45.0% |
! | CTCATGGATTTGGAATGCCT+CGG | - | chr4.2:31419382-31419401 | None:intergenic | 45.0% |
! | CTGTCACTTATGTCCGAAAC+TGG | + | chr4.2:31423044-31423063 | MS.gene065948:intron | 45.0% |
! | GCTCTTGTTTGTCCTTGTCA+TGG | + | chr4.2:31421769-31421788 | MS.gene065948:intron | 45.0% |
! | TGTTACCCAAAGCACTAACC+TGG | - | chr4.2:31419071-31419090 | None:intergenic | 45.0% |
! | TTAGTCTCCCTCTACCGATT+TGG | + | chr4.2:31424445-31424464 | MS.gene065948:intron | 45.0% |
! | TTCGAGTATTGCTGTACAGG+GGG | + | chr4.2:31422872-31422891 | MS.gene065948:intron | 45.0% |
! | TTTAGCTCATGGGACACTAC+AGG | + | chr4.2:31422266-31422285 | MS.gene065948:CDS | 45.0% |
AAGCGGTTGTTGGCATGATC+AGG | + | chr4.2:31423911-31423930 | MS.gene065948:CDS | 50.0% | |
ACAAAAGGAAGGGTCTGCTG+TGG | - | chr4.2:31424496-31424515 | None:intergenic | 50.0% | |
ACTAAAGCTCCCGCATACGT+AGG | - | chr4.2:31421460-31421479 | None:intergenic | 50.0% | |
ACTACCCTGGCCATGATGAT+AGG | + | chr4.2:31424614-31424633 | MS.gene065948:CDS | 50.0% | |
AGGAGTTACTCGCGAAGCAA+AGG | + | chr4.2:31424710-31424729 | MS.gene065948:CDS | 50.0% | |
AGGGGTAACCTCACAGAAGA+TGG | + | chr4.2:31423876-31423895 | MS.gene065948:intron | 50.0% | |
ATGGAGCCTTTGTCACCTTC+AGG | - | chr4.2:31420159-31420178 | None:intergenic | 50.0% | |
CAAGGTTGCTTCAAGCCAGA+AGG | + | chr4.2:31420350-31420369 | MS.gene065948:CDS | 50.0% | |
CACCTTTGGATGCCATGACA+AGG | - | chr4.2:31421784-31421803 | None:intergenic | 50.0% | |
CTAAAGCTCCCGCATACGTA+GGG | - | chr4.2:31421459-31421478 | None:intergenic | 50.0% | |
CTTGTCATGGCATCCAAAGG+TGG | + | chr4.2:31421782-31421801 | MS.gene065948:intron | 50.0% | |
GATCATGCCAACAACCGCTT+CGG | - | chr4.2:31423911-31423930 | None:intergenic | 50.0% | |
GCAGATGCATATGGCCTTTG+CGG | + | chr4.2:31424237-31424256 | MS.gene065948:CDS | 50.0% | |
GCATTGAGATGCAGGAGGAT+AGG | + | chr4.2:31424109-31424128 | MS.gene065948:CDS | 50.0% | |
GGAGTTACTCGCGAAGCAAA+GGG | + | chr4.2:31424711-31424730 | MS.gene065948:CDS | 50.0% | |
GGATAGGCCGTGGAAATTTC+AGG | + | chr4.2:31424125-31424144 | MS.gene065948:CDS | 50.0% | |
GGGGTAACCTCACAGAAGAT+GGG | + | chr4.2:31423877-31423896 | MS.gene065948:intron | 50.0% | |
GTACATATCAAGGGCTGTGC+TGG | + | chr4.2:31421811-31421830 | MS.gene065948:intron | 50.0% | |
GTCCTTGTCATGGCATCCAA+AGG | + | chr4.2:31421779-31421798 | MS.gene065948:intron | 50.0% | |
GTTACTGGAACGTCGAGCTA+TGG | + | chr4.2:31424563-31424582 | MS.gene065948:intron | 50.0% | |
TCGATGCATTGAGATGCAGG+AGG | + | chr4.2:31424104-31424123 | MS.gene065948:CDS | 50.0% | |
TCGTCCAAGGAAGCAGCTTA+TGG | - | chr4.2:31421730-31421749 | None:intergenic | 50.0% | |
TCTTAGACCGAAGCGGTTGT+TGG | + | chr4.2:31423901-31423920 | MS.gene065948:CDS | 50.0% | |
TTTACGTAGACGTGGCCTGA+AGG | + | chr4.2:31420141-31420160 | MS.gene065948:intron | 50.0% | |
! | AGGGTCTCTGTCTTGTTGAC+TGG | + | chr4.2:31424010-31424029 | MS.gene065948:intron | 50.0% |
! | GATGGGTTCTTAGACCGAAG+CGG | + | chr4.2:31423894-31423913 | MS.gene065948:CDS | 50.0% |
! | GGGTCTCTGTCTTGTTGACT+GGG | + | chr4.2:31424011-31424030 | MS.gene065948:intron | 50.0% |
! | GGTCTCTGTCTTGTTGACTG+GGG | + | chr4.2:31424012-31424031 | MS.gene065948:CDS | 50.0% |
! | GTCTTGTTGACTGGGGAAGA+GGG | + | chr4.2:31424019-31424038 | MS.gene065948:CDS | 50.0% |
! | TGTCTTGTTGACTGGGGAAG+AGG | + | chr4.2:31424018-31424037 | MS.gene065948:CDS | 50.0% |
! | TGTGGCACTAAAGGTGATGG+CGG | + | chr4.2:31421891-31421910 | MS.gene065948:intron | 50.0% |
!! | TTCAGAGTAGAGGCATCCCA+TGG | - | chr4.2:31420591-31420610 | None:intergenic | 50.0% |
ACGTGGCCTGAAGGTGACAA+AGG | + | chr4.2:31420150-31420169 | MS.gene065948:intron | 55.0% | |
ATCAAGGGCTGTGCTGGACA+GGG | + | chr4.2:31421817-31421836 | MS.gene065948:CDS | 55.0% | |
CCCTGTACGTTGCACAGGTT+CGG | - | chr4.2:31419565-31419584 | None:intergenic | 55.0% | |
CCGAACCTGTGCAACGTACA+GGG | + | chr4.2:31419562-31419581 | MS.gene065948:intron | 55.0% | |
CTTCTCCCTGTACGTTGCAC+AGG | - | chr4.2:31419570-31419589 | None:intergenic | 55.0% | |
TATCAAGGGCTGTGCTGGAC+AGG | + | chr4.2:31421816-31421835 | MS.gene065948:CDS | 55.0% | |
TCCGAACCTGTGCAACGTAC+AGG | + | chr4.2:31419561-31419580 | MS.gene065948:intron | 55.0% | |
! | AAAATGGTGGGACCCCTTCC+CGG | + | chr4.2:31421432-31421451 | MS.gene065948:intron | 55.0% |
! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr4.2:31421464-31421483 | MS.gene065948:intron | 55.0% |
! | GGAAGGGGTCCCACCATTTT+TGG | - | chr4.2:31421432-31421451 | None:intergenic | 55.0% |
AGATGCAGGAGGATAGGCCG+TGG | + | chr4.2:31424115-31424134 | MS.gene065948:CDS | 60.0% | |
CATACGTAGGGTCCGGGAAG+GGG | - | chr4.2:31421447-31421466 | None:intergenic | 60.0% | |
CTTCCCGGACCCTACGTATG+CGG | + | chr4.2:31421447-31421466 | MS.gene065948:intron | 60.0% | |
GCATACGTAGGGTCCGGGAA+GGG | - | chr4.2:31421448-31421467 | None:intergenic | 60.0% | |
TTCCCGGACCCTACGTATGC+GGG | + | chr4.2:31421448-31421467 | MS.gene065948:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr4.2:31421465-31421484 | MS.gene065948:intron | 60.0% |
AAGGGCTGTGCTGGACAGGG+AGG | + | chr4.2:31421820-31421839 | MS.gene065948:CDS | 65.0% | |
CGCATACGTAGGGTCCGGGA+AGG | - | chr4.2:31421449-31421468 | None:intergenic | 65.0% | |
CTCCCGCATACGTAGGGTCC+GGG | - | chr4.2:31421453-31421472 | None:intergenic | 65.0% | |
GCTCCCGCATACGTAGGGTC+CGG | - | chr4.2:31421454-31421473 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 31418913 | 31424753 | 31418913 | ID=MS.gene065948 |
chr4.2 | mRNA | 31418913 | 31424753 | 31418913 | ID=MS.gene065948.t1;Parent=MS.gene065948 |
chr4.2 | exon | 31418913 | 31419071 | 31418913 | ID=MS.gene065948.t1.exon1;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31418913 | 31419071 | 31418913 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31420281 | 31420371 | 31420281 | ID=MS.gene065948.t1.exon2;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31420281 | 31420371 | 31420281 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31420543 | 31420653 | 31420543 | ID=MS.gene065948.t1.exon3;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31420543 | 31420653 | 31420543 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31420743 | 31420830 | 31420743 | ID=MS.gene065948.t1.exon4;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31420743 | 31420830 | 31420743 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31421812 | 31421903 | 31421812 | ID=MS.gene065948.t1.exon5;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31421812 | 31421903 | 31421812 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31421991 | 31422062 | 31421991 | ID=MS.gene065948.t1.exon6;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31421991 | 31422062 | 31421991 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31422198 | 31422287 | 31422198 | ID=MS.gene065948.t1.exon7;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31422198 | 31422287 | 31422198 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31422369 | 31422526 | 31422369 | ID=MS.gene065948.t1.exon8;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31422369 | 31422526 | 31422369 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31423878 | 31423932 | 31423878 | ID=MS.gene065948.t1.exon9;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31423878 | 31423932 | 31423878 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31424012 | 31424146 | 31424012 | ID=MS.gene065948.t1.exon10;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31424012 | 31424146 | 31424012 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31424237 | 31424358 | 31424237 | ID=MS.gene065948.t1.exon11;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31424237 | 31424358 | 31424237 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
chr4.2 | exon | 31424564 | 31424753 | 31424564 | ID=MS.gene065948.t1.exon12;Parent=MS.gene065948.t1 |
chr4.2 | CDS | 31424564 | 31424753 | 31424564 | ID=cds.MS.gene065948.t1;Parent=MS.gene065948.t1 |
Gene Sequence |
Protein sequence |