Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051478.t1 | AFK38628.1 | 86.3 | 183 | 25 | 0 | 5 | 187 | 2 | 184 | 9.30E-81 | 309.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051478.t1 | Q9SK27 | 49.2 | 181 | 82 | 4 | 4 | 184 | 8 | 178 | 6.8e-40 | 165.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051478.t1 | I3SED6 | 86.3 | 183 | 25 | 0 | 5 | 187 | 2 | 184 | 6.7e-81 | 309.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene051478 | 0.852524 | 4.36E-61 | -1.69E-46 |
| MS.gene049989 | MS.gene051478 | 0.812864 | 3.42E-51 | -1.69E-46 |
| MS.gene050297 | MS.gene051478 | 0.831889 | 1.29E-55 | -1.69E-46 |
| MS.gene050310 | MS.gene051478 | 0.840965 | 6.33E-58 | -1.69E-46 |
| MS.gene05092 | MS.gene051478 | 0.806326 | 8.69E-50 | -1.69E-46 |
| MS.gene051067 | MS.gene051478 | 0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene051263 | MS.gene051478 | 0.858502 | 7.88E-63 | -1.69E-46 |
| MS.gene051478 | MS.gene051648 | 0.803977 | 2.69E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene053144 | 0.818905 | 1.54E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene053536 | 0.824203 | 9.17E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene053538 | 0.822778 | 1.97E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene054584 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene054643 | 0.815697 | 8.10E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene055537 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene055957 | 0.818416 | 1.98E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene056169 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene056228 | 0.819981 | 8.73E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene058197 | 0.820082 | 8.28E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene058198 | 0.818892 | 1.55E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene05894 | 0.826201 | 3.09E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene059164 | 0.811229 | 7.77E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene059300 | 0.840021 | 1.12E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene059424 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene06057 | 0.851842 | 6.82E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene061773 | 0.817265 | 3.61E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene061805 | 0.85418 | 1.46E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene061961 | 0.827576 | 1.45E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene06258 | 0.821162 | 4.67E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene062855 | 0.802665 | 5.04E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene064080 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene064081 | 0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene064082 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene064517 | 0.815659 | 8.26E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene06550 | 0.843879 | 1.07E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene065643 | 0.859504 | 3.95E-63 | -1.69E-46 |
| MS.gene051478 | MS.gene065674 | 0.818174 | 2.25E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene065948 | 0.80191 | 7.20E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene066010 | 0.825504 | 4.52E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene066031 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene067039 | 0.833698 | 4.59E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene067143 | 0.816412 | 5.61E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene06793 | 0.872285 | 3.58E-67 | -1.69E-46 |
| MS.gene051478 | MS.gene068190 | 0.816103 | 6.57E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene068607 | 0.826239 | 3.03E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene069140 | 0.811835 | 5.74E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene070885 | 0.872137 | 4.01E-67 | -1.69E-46 |
| MS.gene051478 | MS.gene071128 | 0.844282 | 8.33E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene071182 | 0.817841 | 2.67E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene071315 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene071316 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene071428 | 0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene071652 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene072080 | 0.80099 | 1.11E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene072402 | 0.837856 | 4.06E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene07246 | 0.825071 | 5.72E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene072718 | 0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene072719 | 0.834242 | 3.36E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene073262 | 0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene073606 | 0.837079 | 6.42E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene073834 | 0.821418 | 4.08E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene08581 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene08815 | 0.834118 | 3.61E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene08860 | 0.800376 | 1.48E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene08971 | 0.832926 | 7.15E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene09234 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene09275 | 0.864582 | 1.10E-64 | -1.69E-46 |
| MS.gene051478 | MS.gene09947 | 0.837117 | 6.28E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene20276 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene20903 | 0.80295 | 4.40E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene21014 | 0.848165 | 7.29E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene21029 | 0.837382 | 5.37E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene21144 | 0.845435 | 4.07E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene21425 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene21620 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene22297 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene22464 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene22470 | 0.829384 | 5.30E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene23003 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene23323 | 0.810185 | 1.31E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene23792 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene23880 | 0.820751 | 5.81E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene23980 | 0.848648 | 5.36E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene24224 | 0.832887 | 7.31E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene24527 | 0.814017 | 1.91E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene24682 | 0.841665 | 4.14E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene24699 | 0.843656 | 1.23E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene24735 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene24822 | 0.825381 | 4.84E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene24982 | 0.843637 | 1.24E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene25945 | 0.809746 | 1.62E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene25966 | 0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene26224 | 0.843549 | 1.31E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene26380 | 0.805772 | 1.14E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene26381 | 0.824661 | 7.15E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene26387 | 0.821959 | 3.06E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene26464 | 0.806936 | 6.46E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene26465 | 0.81611 | 6.55E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene26665 | 0.867669 | 1.15E-65 | -1.69E-46 |
| MS.gene051478 | MS.gene26801 | 0.801811 | 7.55E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene26855 | 0.838158 | 3.40E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene27011 | 0.828859 | 7.11E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene27222 | 0.828296 | 9.73E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene27274 | 0.820845 | 5.53E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene27546 | 0.825037 | 5.83E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene28050 | 0.849596 | 2.92E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene29731 | 0.802481 | 5.50E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene30854 | 0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene32024 | 0.847448 | 1.15E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene32703 | 0.863995 | 1.67E-64 | -1.69E-46 |
| MS.gene051478 | MS.gene32920 | 0.839855 | 1.23E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene33123 | 0.930365 | 1.82E-93 | -1.69E-46 |
| MS.gene051478 | MS.gene33688 | 0.817879 | 2.62E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene34286 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene35715 | 0.855451 | 6.26E-62 | -1.69E-46 |
| MS.gene051478 | MS.gene36265 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene37573 | 0.829786 | 4.24E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene38303 | 0.808723 | 2.69E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene38688 | 0.840772 | 7.11E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene38714 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene38829 | 0.839836 | 1.25E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene39297 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene40409 | 0.803164 | 3.97E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene40782 | 0.85241 | 4.70E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene41164 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene41651 | 0.814654 | 1.38E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene41859 | 0.8383 | 3.12E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene42510 | 0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene42665 | 0.865451 | 5.85E-65 | -1.69E-46 |
| MS.gene051478 | MS.gene43171 | 0.812101 | 5.02E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene43740 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene44375 | 0.845123 | 4.94E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene44844 | 0.800762 | 1.24E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene45937 | 0.8195 | 1.12E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene47280 | 0.818578 | 1.82E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene47366 | 0.800324 | 1.52E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene48507 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene50479 | 0.858241 | 9.43E-63 | -1.69E-46 |
| MS.gene051478 | MS.gene51091 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene51353 | 0.848024 | 7.98E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene51426 | 0.805099 | 1.57E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene51589 | 0.947625 | 4.67E-106 | -1.69E-46 |
| MS.gene051478 | MS.gene52607 | 0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene52703 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene52975 | 0.817704 | 2.87E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene52996 | 0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene53003 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene53481 | 0.846976 | 1.55E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene55101 | 0.827255 | 1.73E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene55687 | 0.817621 | 3.00E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene55782 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene56025 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene56169 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene56596 | 0.814585 | 1.43E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene57320 | 0.848283 | 6.76E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene57428 | 0.814378 | 1.59E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene58836 | 0.84777 | 9.37E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene58950 | 0.814488 | 1.50E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene60118 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene60235 | 0.858038 | 1.08E-62 | -1.69E-46 |
| MS.gene051478 | MS.gene60472 | 0.814183 | 1.75E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene60598 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene60879 | 0.802356 | 5.83E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene63853 | 0.831846 | 1.32E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene64763 | 0.821421 | 4.07E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene64859 | 0.803959 | 2.72E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene65139 | 0.839516 | 1.51E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene65327 | 0.825654 | 4.17E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene65451 | 0.829794 | 4.22E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene66156 | 0.820484 | 6.70E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene66159 | 0.808341 | 3.25E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene66287 | 0.81131 | 7.46E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene66971 | 0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene68611 | 0.818012 | 2.45E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene68852 | 0.807212 | 5.65E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene68949 | 0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene70838 | 0.840736 | 7.26E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene70898 | 0.800138 | 1.66E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene71459 | 0.855656 | 5.45E-62 | -1.69E-46 |
| MS.gene051478 | MS.gene71460 | 0.855451 | 6.25E-62 | -1.69E-46 |
| MS.gene051478 | MS.gene71698 | 0.815804 | 7.66E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene72127 | 0.829299 | 5.56E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene72129 | 0.823815 | 1.13E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene72135 | 0.826809 | 2.21E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene72136 | 0.822322 | 2.52E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene72487 | 0.846551 | 2.02E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene72543 | 0.805955 | 1.04E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene73305 | 0.818554 | 1.84E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene75205 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene75220 | 0.805676 | 1.19E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene75387 | 0.848164 | 7.30E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene75567 | 0.834779 | 2.46E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene75911 | 0.802038 | 6.78E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene76156 | 0.804238 | 2.38E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene77475 | 0.802881 | 4.55E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene77734 | 0.823093 | 1.67E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene78065 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene79126 | 0.851879 | 6.66E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene79784 | 0.812832 | 3.48E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene79951 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene80180 | 0.86708 | 1.78E-65 | -1.69E-46 |
| MS.gene051478 | MS.gene80183 | 0.877536 | 5.81E-69 | -1.69E-46 |
| MS.gene051478 | MS.gene80266 | 0.859513 | 3.93E-63 | -1.69E-46 |
| MS.gene051478 | MS.gene81409 | 0.820496 | 6.65E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene84006 | 0.810009 | 1.43E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene84657 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene84730 | 0.836567 | 8.68E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene84863 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene84973 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene85066 | 0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene86550 | 0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene89081 | 0.835403 | 1.71E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene89565 | 0.852804 | 3.63E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene90732 | 0.830267 | 3.23E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene90876 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene90984 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene92541 | 0.809095 | 2.24E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene92982 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene92988 | 0.81772 | 2.85E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene93102 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene93201 | 0.818633 | 1.77E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene94168 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene95990 | 0.805152 | 1.53E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene97306 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene97762 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene98695 | 0.800671 | 1.29E-48 | -1.69E-46 |
| MS.gene051478 | MS.gene98871 | 0.824777 | 6.72E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene99093 | 0.874524 | 6.32E-68 | -1.69E-46 |
| MS.gene051478 | MS.gene99224 | 0.845869 | 3.10E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene99432 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene99878 | 0.856219 | 3.73E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006553 | MS.gene051478 | PPI |
| MS.gene032997 | MS.gene051478 | PPI |
| MS.gene051478 | MS.gene031754 | PPI |
| MS.gene051478 | MS.gene038783 | PPI |
| MS.gene051478 | MS.gene065888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051478.t1 | MTR_1g014120 | 94.652 | 187 | 7 | 1 | 1 | 187 | 1 | 184 | 1.63e-108 | 308 |
| MS.gene051478.t1 | MTR_3g105930 | 64.474 | 152 | 47 | 3 | 25 | 176 | 24 | 168 | 7.20e-64 | 195 |
| MS.gene051478.t1 | MTR_7g090170 | 56.757 | 148 | 40 | 4 | 25 | 172 | 24 | 147 | 1.19e-49 | 157 |
| MS.gene051478.t1 | MTR_8g463180 | 46.281 | 121 | 62 | 2 | 12 | 132 | 8 | 125 | 1.52e-35 | 126 |
| MS.gene051478.t1 | MTR_2g079030 | 42.763 | 152 | 83 | 3 | 10 | 161 | 8 | 155 | 1.19e-34 | 128 |
| MS.gene051478.t1 | MTR_4g081100 | 49.541 | 109 | 54 | 1 | 24 | 132 | 28 | 135 | 3.67e-34 | 120 |
| MS.gene051478.t1 | MTR_6g022170 | 48.182 | 110 | 54 | 2 | 21 | 129 | 26 | 133 | 1.64e-31 | 112 |
| MS.gene051478.t1 | MTR_2g090580 | 38.286 | 175 | 88 | 4 | 30 | 187 | 29 | 200 | 1.94e-29 | 108 |
| MS.gene051478.t1 | MTR_4g078410 | 44.615 | 130 | 68 | 3 | 25 | 153 | 22 | 148 | 2.52e-29 | 107 |
| MS.gene051478.t1 | MTR_2g090575 | 41.818 | 165 | 77 | 7 | 11 | 163 | 11 | 168 | 2.76e-29 | 111 |
| MS.gene051478.t1 | MTR_2g101300 | 39.726 | 146 | 75 | 6 | 19 | 162 | 18 | 152 | 3.98e-28 | 104 |
| MS.gene051478.t1 | MTR_4g111640 | 41.176 | 119 | 61 | 4 | 16 | 132 | 24 | 135 | 8.36e-27 | 100 |
| MS.gene051478.t1 | MTR_4g124280 | 45.455 | 99 | 54 | 0 | 32 | 130 | 28 | 126 | 9.10e-27 | 102 |
| MS.gene051478.t1 | MTR_4g077787 | 36.913 | 149 | 81 | 5 | 1 | 143 | 1 | 142 | 1.29e-26 | 100 |
| MS.gene051478.t1 | MTR_2g083250 | 41.818 | 110 | 61 | 3 | 25 | 132 | 23 | 131 | 6.78e-26 | 100 |
| MS.gene051478.t1 | MTR_8g086360 | 36.813 | 182 | 102 | 5 | 7 | 178 | 3 | 181 | 1.14e-25 | 98.2 |
| MS.gene051478.t1 | MTR_4g130780 | 38.095 | 126 | 76 | 1 | 5 | 128 | 4 | 129 | 1.66e-24 | 94.7 |
| MS.gene051478.t1 | MTR_8g094990 | 36.686 | 169 | 91 | 4 | 12 | 167 | 8 | 173 | 3.35e-24 | 96.3 |
| MS.gene051478.t1 | MTR_4g112310 | 44.706 | 85 | 45 | 1 | 48 | 132 | 3 | 85 | 3.33e-23 | 90.1 |
| MS.gene051478.t1 | MTR_2g088990 | 37.342 | 158 | 89 | 5 | 12 | 168 | 8 | 156 | 6.45e-23 | 91.7 |
| MS.gene051478.t1 | MTR_4g130800 | 38.281 | 128 | 73 | 3 | 7 | 129 | 4 | 130 | 8.25e-23 | 92.4 |
| MS.gene051478.t1 | MTR_8g095013 | 42.373 | 118 | 63 | 3 | 11 | 128 | 11 | 123 | 1.04e-22 | 92.8 |
| MS.gene051478.t1 | MTR_1g077790 | 39.796 | 98 | 58 | 1 | 32 | 128 | 32 | 129 | 3.42e-22 | 89.0 |
| MS.gene051478.t1 | MTR_4g130800 | 42.202 | 109 | 61 | 2 | 22 | 129 | 22 | 129 | 3.73e-22 | 90.5 |
| MS.gene051478.t1 | MTR_5g006040 | 26.705 | 176 | 121 | 3 | 12 | 187 | 11 | 178 | 8.67e-22 | 87.8 |
| MS.gene051478.t1 | MTR_8g095020 | 40.625 | 128 | 63 | 5 | 30 | 148 | 27 | 150 | 2.63e-21 | 89.0 |
| MS.gene051478.t1 | MTR_3g092170 | 35.220 | 159 | 85 | 3 | 12 | 163 | 8 | 155 | 3.25e-21 | 88.2 |
| MS.gene051478.t1 | MTR_4g114870 | 32.738 | 168 | 92 | 2 | 32 | 178 | 194 | 361 | 4.40e-20 | 86.7 |
| MS.gene051478.t1 | MTR_4g114870 | 31.852 | 135 | 89 | 2 | 12 | 146 | 13 | 144 | 1.40e-17 | 79.3 |
| MS.gene051478.t1 | MTR_1g104800 | 35.833 | 120 | 75 | 1 | 49 | 166 | 43 | 162 | 1.69e-18 | 79.3 |
| MS.gene051478.t1 | MTR_6g083240 | 33.083 | 133 | 81 | 4 | 37 | 165 | 35 | 163 | 6.13e-17 | 74.7 |
| MS.gene051478.t1 | MTR_6g080660 | 33.333 | 114 | 69 | 3 | 17 | 130 | 18 | 124 | 1.96e-16 | 74.3 |
| MS.gene051478.t1 | MTR_0334s0010 | 37.500 | 120 | 64 | 4 | 17 | 128 | 9 | 125 | 1.99e-16 | 73.9 |
| MS.gene051478.t1 | MTR_4g114830 | 34.375 | 96 | 61 | 2 | 25 | 118 | 25 | 120 | 3.03e-16 | 72.8 |
| MS.gene051478.t1 | MTR_8g007020 | 36.719 | 128 | 72 | 4 | 5 | 130 | 2 | 122 | 4.88e-16 | 72.8 |
| MS.gene051478.t1 | MTR_1g090190 | 31.613 | 155 | 93 | 6 | 32 | 184 | 26 | 169 | 6.62e-16 | 72.0 |
| MS.gene051478.t1 | MTR_8g099220 | 32.500 | 120 | 76 | 2 | 13 | 128 | 9 | 127 | 1.06e-15 | 70.5 |
| MS.gene051478.t1 | MTR_8g007035 | 35.938 | 128 | 73 | 4 | 5 | 130 | 2 | 122 | 2.75e-15 | 70.9 |
| MS.gene051478.t1 | MTR_4g067200 | 27.869 | 122 | 77 | 3 | 17 | 128 | 9 | 129 | 2.53e-14 | 67.8 |
| MS.gene051478.t1 | MTR_4g066110 | 27.869 | 122 | 77 | 3 | 17 | 128 | 9 | 129 | 2.53e-14 | 67.8 |
| MS.gene051478.t1 | MTR_7g086100 | 33.333 | 126 | 75 | 3 | 13 | 134 | 7 | 127 | 7.94e-14 | 67.8 |
| MS.gene051478.t1 | MTR_2g025580 | 34.426 | 122 | 65 | 3 | 44 | 164 | 39 | 146 | 7.98e-14 | 66.6 |
| MS.gene051478.t1 | MTR_6g023760 | 36.735 | 98 | 56 | 4 | 32 | 128 | 29 | 121 | 5.79e-13 | 64.3 |
| MS.gene051478.t1 | MTR_3g099540 | 39.506 | 81 | 48 | 1 | 48 | 128 | 42 | 121 | 8.33e-13 | 62.8 |
| MS.gene051478.t1 | MTR_8g089110 | 32.759 | 116 | 74 | 2 | 11 | 126 | 7 | 118 | 1.26e-12 | 62.0 |
| MS.gene051478.t1 | MTR_3g099580 | 40.741 | 81 | 47 | 1 | 48 | 128 | 41 | 120 | 1.41e-12 | 63.5 |
| MS.gene051478.t1 | MTR_7g086090 | 33.058 | 121 | 72 | 3 | 12 | 128 | 6 | 121 | 1.78e-12 | 63.9 |
| MS.gene051478.t1 | MTR_7g086280 | 30.952 | 126 | 78 | 3 | 13 | 134 | 7 | 127 | 2.96e-12 | 62.4 |
| MS.gene051478.t1 | MTR_6g013420 | 31.343 | 134 | 77 | 5 | 7 | 131 | 10 | 137 | 3.05e-12 | 62.4 |
| MS.gene051478.t1 | MTR_3g099570 | 39.506 | 81 | 48 | 1 | 48 | 128 | 41 | 120 | 3.59e-12 | 62.4 |
| MS.gene051478.t1 | MTR_1g112700 | 22.995 | 187 | 121 | 5 | 1 | 182 | 1 | 169 | 3.66e-12 | 62.4 |
| MS.gene051478.t1 | MTR_1g090420 | 27.152 | 151 | 104 | 3 | 15 | 161 | 15 | 163 | 5.55e-12 | 62.4 |
| MS.gene051478.t1 | MTR_7g086230 | 30.159 | 126 | 79 | 3 | 13 | 134 | 7 | 127 | 7.70e-12 | 61.2 |
| MS.gene051478.t1 | MTR_3g099980 | 37.634 | 93 | 53 | 2 | 37 | 128 | 34 | 122 | 2.49e-11 | 60.5 |
| MS.gene051478.t1 | MTR_3g099680 | 37.634 | 93 | 53 | 2 | 37 | 128 | 34 | 122 | 7.79e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051478.t1 | AT4G31840 | 50.000 | 176 | 77 | 3 | 12 | 187 | 11 | 175 | 2.77e-57 | 178 |
| MS.gene051478.t1 | AT2G25060 | 50.286 | 175 | 75 | 5 | 11 | 184 | 15 | 178 | 6.49e-55 | 172 |
| MS.gene051478.t1 | AT5G25090 | 53.279 | 122 | 57 | 0 | 11 | 132 | 9 | 130 | 3.88e-47 | 152 |
| MS.gene051478.t1 | AT4G30590 | 53.600 | 125 | 54 | 1 | 12 | 132 | 8 | 132 | 1.96e-45 | 148 |
| MS.gene051478.t1 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 53 | 201 | 1.06e-43 | 145 |
| MS.gene051478.t1 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 21 | 169 | 1.10e-43 | 144 |
| MS.gene051478.t1 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 20 | 168 | 1.20e-43 | 144 |
| MS.gene051478.t1 | AT2G23990 | 51.773 | 141 | 55 | 3 | 14 | 150 | 10 | 141 | 6.31e-42 | 140 |
| MS.gene051478.t1 | AT2G23990 | 45.625 | 160 | 55 | 4 | 14 | 150 | 10 | 160 | 3.14e-37 | 129 |
| MS.gene051478.t1 | AT3G20570 | 41.104 | 163 | 82 | 5 | 12 | 164 | 15 | 173 | 2.01e-35 | 123 |
| MS.gene051478.t1 | AT5G14345 | 57.143 | 91 | 37 | 1 | 40 | 130 | 28 | 116 | 2.62e-31 | 111 |
| MS.gene051478.t1 | AT5G53870 | 40.252 | 159 | 84 | 5 | 10 | 161 | 9 | 163 | 1.81e-29 | 111 |
| MS.gene051478.t1 | AT5G53870 | 40.252 | 159 | 84 | 5 | 10 | 161 | 9 | 163 | 2.38e-29 | 111 |
| MS.gene051478.t1 | AT4G28365 | 39.506 | 162 | 89 | 6 | 13 | 168 | 11 | 169 | 1.10e-28 | 106 |
| MS.gene051478.t1 | AT3G18590 | 45.833 | 120 | 59 | 4 | 12 | 129 | 12 | 127 | 1.61e-28 | 105 |
| MS.gene051478.t1 | AT4G27520 | 44.628 | 121 | 63 | 3 | 12 | 132 | 16 | 132 | 2.95e-28 | 108 |
| MS.gene051478.t1 | AT4G32490 | 34.857 | 175 | 85 | 5 | 13 | 166 | 11 | 177 | 2.86e-25 | 97.8 |
| MS.gene051478.t1 | AT1G48940 | 38.889 | 126 | 69 | 3 | 13 | 132 | 6 | 129 | 2.90e-25 | 96.7 |
| MS.gene051478.t1 | AT1G79800 | 34.459 | 148 | 85 | 4 | 8 | 147 | 8 | 151 | 6.02e-22 | 88.6 |
| MS.gene051478.t1 | AT2G31050 | 36.296 | 135 | 80 | 3 | 11 | 145 | 12 | 140 | 1.62e-21 | 87.4 |
| MS.gene051478.t1 | AT1G64640 | 35.897 | 117 | 74 | 1 | 32 | 148 | 36 | 151 | 1.95e-21 | 87.0 |
| MS.gene051478.t1 | AT2G26720 | 33.094 | 139 | 85 | 3 | 11 | 149 | 12 | 142 | 9.64e-20 | 82.8 |
| MS.gene051478.t1 | AT2G32300 | 35.714 | 140 | 74 | 5 | 25 | 160 | 23 | 150 | 5.36e-19 | 82.0 |
| MS.gene051478.t1 | AT2G32300 | 35.714 | 140 | 74 | 5 | 25 | 160 | 53 | 180 | 1.72e-18 | 81.3 |
| MS.gene051478.t1 | AT5G20230 | 34.426 | 122 | 76 | 3 | 26 | 145 | 23 | 142 | 5.31e-17 | 75.5 |
| MS.gene051478.t1 | AT5G26330 | 37.500 | 80 | 50 | 0 | 50 | 129 | 43 | 122 | 2.67e-16 | 73.6 |
| MS.gene051478.t1 | AT5G07475 | 28.571 | 182 | 117 | 6 | 12 | 187 | 10 | 184 | 1.61e-15 | 71.6 |
| MS.gene051478.t1 | AT3G60270 | 36.364 | 99 | 58 | 2 | 32 | 130 | 29 | 122 | 2.41e-14 | 68.2 |
| MS.gene051478.t1 | AT1G72230 | 31.967 | 122 | 72 | 2 | 48 | 159 | 38 | 158 | 3.45e-13 | 65.1 |
| MS.gene051478.t1 | AT1G45063 | 31.933 | 119 | 75 | 3 | 12 | 129 | 14 | 127 | 2.07e-12 | 64.3 |
| MS.gene051478.t1 | AT1G45063 | 31.933 | 119 | 75 | 3 | 12 | 129 | 14 | 127 | 2.88e-12 | 64.3 |
| MS.gene051478.t1 | AT3G27200 | 29.839 | 124 | 76 | 3 | 11 | 129 | 5 | 122 | 2.96e-12 | 62.4 |
Find 44 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCATCTTGTTCTCTTT+TGG | 0.177913 | 1.3:+8181478 | MS.gene051478:CDS |
| CTGTGGTTGTCATGAGTCTA+AGG | 0.276529 | 1.3:+8182212 | MS.gene051478:CDS |
| CCCATCATTGTAGTGTTTGA+TGG | 0.297797 | 1.3:-8182104 | None:intergenic |
| TCTCCACTGATGTAGTAGTA+TGG | 0.331847 | 1.3:-8182157 | None:intergenic |
| AAAGTGAGATTTGATCATTC+TGG | 0.347650 | 1.3:+8182133 | MS.gene051478:CDS |
| AATCTGATTCTCTCAACAAA+TGG | 0.402045 | 1.3:+8181588 | MS.gene051478:CDS |
| GGAGCAACAGCTGAGCCAGC+TGG | 0.404423 | 1.3:-8182295 | None:intergenic |
| CTACTACATCAGTGGAGAAA+AGG | 0.404851 | 1.3:+8182162 | MS.gene051478:CDS |
| CCCATCAAACACTACAATGA+TGG | 0.417208 | 1.3:+8182103 | MS.gene051478:CDS |
| CCATCATTGTAGTGTTTGAT+GGG | 0.419117 | 1.3:-8182103 | None:intergenic |
| TGCATGGAAGGTTCCTTCTT+CGG | 0.420616 | 1.3:+8181565 | MS.gene051478:CDS |
| CCTTCACCAGCTGAAGTTGA+TGG | 0.422615 | 1.3:+8182271 | MS.gene051478:CDS |
| GCAAGGTGGTGGTGTATTTG+TGG | 0.435276 | 1.3:+8182345 | MS.gene051478:CDS |
| AAAAGTGAAAATTACTTAGA+TGG | 0.435763 | 1.3:-8181640 | None:intergenic |
| ACAAATGGGCTTCAAGTGTT+CGG | 0.440098 | 1.3:+8181603 | MS.gene051478:CDS |
| AAAACAGTTGCACCACTTGT+TGG | 0.440200 | 1.3:-8182322 | None:intergenic |
| GCAGCTAAGGATATCTTGCT+TGG | 0.450579 | 1.3:+8181530 | MS.gene051478:CDS |
| TACTACATCAGTGGAGAAAA+GGG | 0.477152 | 1.3:+8182163 | MS.gene051478:CDS |
| ATCTGATTCTCTCAACAAAT+GGG | 0.481996 | 1.3:+8181589 | MS.gene051478:CDS |
| TGTGGTTGTCATGAGTCTAA+GGG | 0.500303 | 1.3:+8182213 | MS.gene051478:CDS |
| GTTGCACCACTTGTTGGAGC+TGG | 0.502974 | 1.3:-8182316 | None:intergenic |
| AGAGAATCAGATTCCGAAGA+AGG | 0.516269 | 1.3:-8181578 | None:intergenic |
| ACTTCAGCTGGTGAAGGTGC+TGG | 0.517037 | 1.3:-8182265 | None:intergenic |
| CCATCAAACACTACAATGAT+GGG | 0.517725 | 1.3:+8182104 | MS.gene051478:CDS |
| GCTGAAGTTGATGGTCCAGC+TGG | 0.527675 | 1.3:+8182280 | MS.gene051478:CDS |
| GCTGGACCATCAACTTCAGC+TGG | 0.530028 | 1.3:-8182277 | None:intergenic |
| TCAAGTGTTCGGTTTCAAGT+TGG | 0.534785 | 1.3:+8181614 | MS.gene051478:CDS |
| TCAGTTTGGAAATATGAAGC+TGG | 0.536642 | 1.3:+8182022 | MS.gene051478:intron |
| GAAAAGGGTCACTGTGAGAA+GGG | 0.555253 | 1.3:+8182178 | MS.gene051478:CDS |
| GTGGTTGTCATGAGTCTAAG+GGG | 0.573266 | 1.3:+8182214 | MS.gene051478:CDS |
| AGAAAAGGGTCACTGTGAGA+AGG | 0.575414 | 1.3:+8182177 | MS.gene051478:CDS |
| CCATCAACTTCAGCTGGTGA+AGG | 0.581807 | 1.3:-8182271 | None:intergenic |
| GGTGGTGTATTTGTGGCTGT+AGG | 0.582095 | 1.3:+8182352 | MS.gene051478:CDS |
| GTTGCTCCAGCTCCAACAAG+TGG | 0.607631 | 1.3:+8182310 | MS.gene051478:CDS |
| GCTAAGGATATCTTGCTTGG+TGG | 0.617121 | 1.3:+8181533 | MS.gene051478:CDS |
| GGTCCATACTACTACATCAG+TGG | 0.620422 | 1.3:+8182154 | MS.gene051478:CDS |
| TGGCAAAACTGATGCATGGA+AGG | 0.623442 | 1.3:+8181553 | MS.gene051478:CDS |
| TGGTTGTCATGAGTCTAAGG+GGG | 0.630347 | 1.3:+8182215 | MS.gene051478:CDS |
| TAGGAGTGTTTGTTGCCATG+TGG | 0.640277 | 1.3:+8182371 | MS.gene051478:CDS |
| TTGGTGGCAAAACTGATGCA+TGG | 0.676457 | 1.3:+8181549 | MS.gene051478:CDS |
| TTCAAATCAGAAAAGCCACA+TGG | 0.691376 | 1.3:-8182386 | None:intergenic |
| GGTTGTCATGAGTCTAAGGG+GGG | 0.691450 | 1.3:+8182216 | MS.gene051478:CDS |
| GTTGTCATGAGTCTAAGGGG+GGG | 0.700416 | 1.3:+8182217 | MS.gene051478:CDS |
| GAAGGGTCAGAAGCTTACTG+TGG | 0.745278 | 1.3:+8182195 | MS.gene051478:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCACATAAAAATAAAAAT+TGG | - | chr1.3:8181956-8181975 | None:intergenic | 15.0% |
| !!! | AATATAAAAAAATTGGGTTT+TGG | - | chr1.3:8181876-8181895 | None:intergenic | 15.0% |
| !!! | ACAATAAAGAAACAATTTTA+AGG | - | chr1.3:8181785-8181804 | None:intergenic | 15.0% |
| !!! | TGAATTTTTACTGATAATTA+AGG | - | chr1.3:8181721-8181740 | None:intergenic | 15.0% |
| !!! | TGAATTTTTAGTGATAAAAA+AGG | - | chr1.3:8181679-8181698 | None:intergenic | 15.0% |
| !! | AAAAGTGAAAATTACTTAGA+TGG | - | chr1.3:8181643-8181662 | None:intergenic | 20.0% |
| !! | GGTGGAAATATAAAAAAATT+GGG | - | chr1.3:8181882-8181901 | None:intergenic | 20.0% |
| !! | TGGTGGAAATATAAAAAAAT+TGG | - | chr1.3:8181883-8181902 | None:intergenic | 20.0% |
| !!! | TTTTTACATTTTCATCATCT+TGG | + | chr1.3:8181839-8181858 | MS.gene051478:intron | 20.0% |
| ! | ATGAACAATAAAGTAGTTAG+TGG | - | chr1.3:8181992-8182011 | None:intergenic | 25.0% |
| ! | TTGAAAACAAAATACCAAGA+TGG | - | chr1.3:8181903-8181922 | None:intergenic | 25.0% |
| !! | TTTTTATATTTCCACCATCT+TGG | + | chr1.3:8181886-8181905 | MS.gene051478:intron | 25.0% |
| !!! | TCATATTTTTGTTCTCAGTT+TGG | + | chr1.3:8182008-8182027 | MS.gene051478:intron | 25.0% |
| AAAACAAAATACCAAGATGG+TGG | - | chr1.3:8181900-8181919 | None:intergenic | 30.0% | |
| AAAGTGAGATTTGATCATTC+TGG | + | chr1.3:8182133-8182152 | MS.gene051478:CDS | 30.0% | |
| AATCTGATTCTCTCAACAAA+TGG | + | chr1.3:8181588-8181607 | MS.gene051478:CDS | 30.0% | |
| ATCTGATTCTCTCAACAAAT+GGG | + | chr1.3:8181589-8181608 | MS.gene051478:CDS | 30.0% | |
| ! | TTCATCATCTTGTTCTCTTT+TGG | + | chr1.3:8181478-8181497 | MS.gene051478:CDS | 30.0% |
| !! | TTGGTTCTTTTTGTTCTCTT+TGG | + | chr1.3:8181497-8181516 | MS.gene051478:CDS | 30.0% |
| CCATCAAACACTACAATGAT+GGG | + | chr1.3:8182104-8182123 | MS.gene051478:CDS | 35.0% | |
| CCATCATTGTAGTGTTTGAT+GGG | - | chr1.3:8182106-8182125 | None:intergenic | 35.0% | |
| TACTACATCAGTGGAGAAAA+GGG | + | chr1.3:8182163-8182182 | MS.gene051478:CDS | 35.0% | |
| TCAGTTTGGAAATATGAAGC+TGG | + | chr1.3:8182022-8182041 | MS.gene051478:intron | 35.0% | |
| ! | TTCTGTTTTGCAAGTGAGTA+AGG | + | chr1.3:8182051-8182070 | MS.gene051478:CDS | 35.0% |
| AAAACAGTTGCACCACTTGT+TGG | - | chr1.3:8182325-8182344 | None:intergenic | 40.0% | |
| AGAGAATCAGATTCCGAAGA+AGG | - | chr1.3:8181581-8181600 | None:intergenic | 40.0% | |
| CCCATCAAACACTACAATGA+TGG | + | chr1.3:8182103-8182122 | MS.gene051478:CDS | 40.0% | |
| CCCATCATTGTAGTGTTTGA+TGG | - | chr1.3:8182107-8182126 | None:intergenic | 40.0% | |
| CTACTACATCAGTGGAGAAA+AGG | + | chr1.3:8182162-8182181 | MS.gene051478:CDS | 40.0% | |
| GCTGGTGAAAAAGCAACAAT+GGG | - | chr1.3:8182250-8182269 | None:intergenic | 40.0% | |
| TCTCCACTGATGTAGTAGTA+TGG | - | chr1.3:8182160-8182179 | None:intergenic | 40.0% | |
| TGCTGGTGAAAAAGCAACAA+TGG | - | chr1.3:8182251-8182270 | None:intergenic | 40.0% | |
| TGTGGTTGTCATGAGTCTAA+GGG | + | chr1.3:8182213-8182232 | MS.gene051478:CDS | 40.0% | |
| ! | ACAAATGGGCTTCAAGTGTT+CGG | + | chr1.3:8181603-8181622 | MS.gene051478:CDS | 40.0% |
| ! | TCAAGTGTTCGGTTTCAAGT+TGG | + | chr1.3:8181614-8181633 | MS.gene051478:CDS | 40.0% |
| !!! | GTAGTGTTTGATGGGTTTTG+AGG | - | chr1.3:8182098-8182117 | None:intergenic | 40.0% |
| AGAAAAGGGTCACTGTGAGA+AGG | + | chr1.3:8182177-8182196 | MS.gene051478:CDS | 45.0% | |
| CTGTGGTTGTCATGAGTCTA+AGG | + | chr1.3:8182212-8182231 | MS.gene051478:CDS | 45.0% | |
| GAAAAGGGTCACTGTGAGAA+GGG | + | chr1.3:8182178-8182197 | MS.gene051478:CDS | 45.0% | |
| GCAGCTAAGGATATCTTGCT+TGG | + | chr1.3:8181530-8181549 | MS.gene051478:CDS | 45.0% | |
| GCTAAGGATATCTTGCTTGG+TGG | + | chr1.3:8181533-8181552 | MS.gene051478:CDS | 45.0% | |
| GGTCCATACTACTACATCAG+TGG | + | chr1.3:8182154-8182173 | MS.gene051478:CDS | 45.0% | |
| GTGGTTGTCATGAGTCTAAG+GGG | + | chr1.3:8182214-8182233 | MS.gene051478:CDS | 45.0% | |
| TGCATGGAAGGTTCCTTCTT+CGG | + | chr1.3:8181565-8181584 | MS.gene051478:CDS | 45.0% | |
| TGGCAAAACTGATGCATGGA+AGG | + | chr1.3:8181553-8181572 | MS.gene051478:CDS | 45.0% | |
| TGGTTGTCATGAGTCTAAGG+GGG | + | chr1.3:8182215-8182234 | MS.gene051478:CDS | 45.0% | |
| ! | AGTGGTGCAACTGTTTTGCA+AGG | + | chr1.3:8182328-8182347 | MS.gene051478:CDS | 45.0% |
| ! | TGGTTGTGCTTTTGCAGCTA+AGG | + | chr1.3:8181517-8181536 | MS.gene051478:CDS | 45.0% |
| ! | TTGGTGGCAAAACTGATGCA+TGG | + | chr1.3:8181549-8181568 | MS.gene051478:CDS | 45.0% |
| !! | TAGGAGTGTTTGTTGCCATG+TGG | + | chr1.3:8182371-8182390 | MS.gene051478:CDS | 45.0% |
| CCATCAACTTCAGCTGGTGA+AGG | - | chr1.3:8182274-8182293 | None:intergenic | 50.0% | |
| CCTTCACCAGCTGAAGTTGA+TGG | + | chr1.3:8182271-8182290 | MS.gene051478:CDS | 50.0% | |
| GAAGGGTCAGAAGCTTACTG+TGG | + | chr1.3:8182195-8182214 | MS.gene051478:CDS | 50.0% | |
| GGTGGTGTATTTGTGGCTGT+AGG | + | chr1.3:8182352-8182371 | MS.gene051478:CDS | 50.0% | |
| GGTTGTCATGAGTCTAAGGG+GGG | + | chr1.3:8182216-8182235 | MS.gene051478:CDS | 50.0% | |
| GTTGTCATGAGTCTAAGGGG+GGG | + | chr1.3:8182217-8182236 | MS.gene051478:CDS | 50.0% | |
| ! | GCAACTGTTTTGCAAGGTGG+TGG | + | chr1.3:8182334-8182353 | MS.gene051478:CDS | 50.0% |
| ! | GCAAGGTGGTGGTGTATTTG+TGG | + | chr1.3:8182345-8182364 | MS.gene051478:CDS | 50.0% |
| ! | GGTGCAACTGTTTTGCAAGG+TGG | + | chr1.3:8182331-8182350 | MS.gene051478:CDS | 50.0% |
| GCTGGACCATCAACTTCAGC+TGG | - | chr1.3:8182280-8182299 | None:intergenic | 55.0% | |
| GTTGCTCCAGCTCCAACAAG+TGG | + | chr1.3:8182310-8182329 | MS.gene051478:CDS | 55.0% | |
| TGAGTCTAAGGGGGGGAAGT+AGG | + | chr1.3:8182224-8182243 | MS.gene051478:CDS | 55.0% | |
| ! | ACTTCAGCTGGTGAAGGTGC+TGG | - | chr1.3:8182268-8182287 | None:intergenic | 55.0% |
| ! | GTTGCACCACTTGTTGGAGC+TGG | - | chr1.3:8182319-8182338 | None:intergenic | 55.0% |
| !! | GCTGAAGTTGATGGTCCAGC+TGG | + | chr1.3:8182280-8182299 | MS.gene051478:CDS | 55.0% |
| GGAGCAACAGCTGAGCCAGC+TGG | - | chr1.3:8182298-8182317 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 8181461 | 8182402 | 8181461 | ID=MS.gene051478 |
| chr1.3 | mRNA | 8181461 | 8182402 | 8181461 | ID=MS.gene051478.t1;Parent=MS.gene051478 |
| chr1.3 | exon | 8181461 | 8181647 | 8181461 | ID=MS.gene051478.t1.exon1;Parent=MS.gene051478.t1 |
| chr1.3 | CDS | 8181461 | 8181647 | 8181461 | ID=cds.MS.gene051478.t1;Parent=MS.gene051478.t1 |
| chr1.3 | exon | 8182026 | 8182402 | 8182026 | ID=MS.gene051478.t1.exon2;Parent=MS.gene051478.t1 |
| chr1.3 | CDS | 8182026 | 8182402 | 8182026 | ID=cds.MS.gene051478.t1;Parent=MS.gene051478.t1 |
| Gene Sequence |
| Protein sequence |
