Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066834.t1 | RHN69244.1 | 97.6 | 548 | 13 | 0 | 1 | 548 | 56 | 603 | 1.90E-270 | 941.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066834.t1 | Q9C7G0 | 57.4 | 517 | 213 | 4 | 1 | 515 | 48 | 559 | 3.9e-152 | 539.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066834.t1 | G7JC01 | 97.6 | 548 | 13 | 0 | 1 | 548 | 48 | 595 | 1.3e-270 | 941.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050221 | MS.gene066834 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene066834 | 0.812252 | 4.66E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene066834 | 0.813428 | 2.57E-51 | -1.69E-46 |
| MS.gene055103 | MS.gene066834 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene066834 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene058722 | MS.gene066834 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene066834 | 0.80422 | 2.40E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene066834 | 0.816217 | 6.20E-52 | -1.69E-46 |
| MS.gene059634 | MS.gene066834 | 0.801676 | 8.05E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94838 | MS.gene066834 | PPI |
| MS.gene88400 | MS.gene066834 | PPI |
| MS.gene066834 | MS.gene63824 | PPI |
| MS.gene87213 | MS.gene066834 | PPI |
| MS.gene016508 | MS.gene066834 | PPI |
| MS.gene81433 | MS.gene066834 | PPI |
| MS.gene063836 | MS.gene066834 | PPI |
| MS.gene63822 | MS.gene066834 | PPI |
| MS.gene64957 | MS.gene066834 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066834.t1 | MTR_3g085440 | 97.628 | 548 | 13 | 0 | 1 | 548 | 48 | 595 | 0.0 | 1101 |
| MS.gene066834.t1 | MTR_3g085440 | 96.883 | 385 | 12 | 0 | 1 | 385 | 48 | 432 | 0.0 | 761 |
| MS.gene066834.t1 | MTR_5g093860 | 45.324 | 556 | 279 | 8 | 1 | 548 | 44 | 582 | 6.24e-151 | 445 |
| MS.gene066834.t1 | MTR_6g061690 | 44.491 | 481 | 254 | 8 | 1 | 477 | 45 | 516 | 1.04e-124 | 382 |
| MS.gene066834.t1 | MTR_1g038840 | 41.833 | 502 | 276 | 8 | 1 | 489 | 5 | 503 | 3.13e-120 | 366 |
| MS.gene066834.t1 | MTR_1g038840 | 41.833 | 502 | 276 | 8 | 1 | 489 | 45 | 543 | 9.36e-120 | 366 |
| MS.gene066834.t1 | MTR_1g076700 | 39.744 | 546 | 305 | 8 | 1 | 541 | 44 | 570 | 5.73e-116 | 360 |
| MS.gene066834.t1 | MTR_8g041400 | 39.504 | 524 | 291 | 8 | 1 | 518 | 43 | 546 | 3.57e-112 | 345 |
| MS.gene066834.t1 | MTR_7g075220 | 38.495 | 465 | 278 | 4 | 1 | 465 | 354 | 810 | 7.76e-95 | 310 |
| MS.gene066834.t1 | MTR_8g023220 | 36.831 | 486 | 266 | 10 | 1 | 473 | 45 | 502 | 1.23e-79 | 259 |
| MS.gene066834.t1 | MTR_8g032090 | 44.211 | 95 | 49 | 1 | 202 | 296 | 202 | 292 | 2.17e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066834.t1 | AT1G27920 | 61.122 | 517 | 194 | 4 | 1 | 515 | 48 | 559 | 0.0 | 629 |
| MS.gene066834.t1 | AT1G27920 | 66.944 | 360 | 116 | 2 | 1 | 358 | 48 | 406 | 1.51e-171 | 491 |
| MS.gene066834.t1 | AT5G55230 | 47.817 | 504 | 249 | 6 | 1 | 497 | 44 | 540 | 6.21e-146 | 432 |
| MS.gene066834.t1 | AT5G55230 | 47.817 | 504 | 249 | 6 | 1 | 497 | 44 | 540 | 6.21e-146 | 432 |
| MS.gene066834.t1 | AT4G26760 | 45.714 | 525 | 266 | 6 | 1 | 512 | 44 | 562 | 7.79e-146 | 432 |
| MS.gene066834.t1 | AT5G55230 | 45.216 | 533 | 249 | 7 | 1 | 497 | 44 | 569 | 1.98e-139 | 417 |
| MS.gene066834.t1 | AT2G01910 | 41.202 | 466 | 265 | 4 | 1 | 459 | 5 | 468 | 1.88e-123 | 374 |
| MS.gene066834.t1 | AT2G01910 | 41.202 | 466 | 265 | 4 | 1 | 459 | 46 | 509 | 4.85e-123 | 374 |
| MS.gene066834.t1 | AT2G38720 | 42.348 | 477 | 265 | 5 | 1 | 475 | 37 | 505 | 2.51e-120 | 365 |
| MS.gene066834.t1 | AT1G14690 | 39.315 | 496 | 288 | 5 | 1 | 485 | 46 | 539 | 3.28e-118 | 362 |
| MS.gene066834.t1 | AT1G14690 | 39.315 | 496 | 288 | 5 | 1 | 485 | 46 | 539 | 3.28e-118 | 362 |
| MS.gene066834.t1 | AT5G51600 | 41.718 | 489 | 271 | 5 | 8 | 491 | 51 | 530 | 3.15e-114 | 355 |
| MS.gene066834.t1 | AT3G60840 | 36.842 | 494 | 296 | 7 | 1 | 491 | 44 | 524 | 9.47e-97 | 308 |
| MS.gene066834.t1 | AT5G62250 | 36.907 | 485 | 293 | 7 | 8 | 483 | 45 | 525 | 3.03e-90 | 288 |
| MS.gene066834.t1 | AT5G62250 | 36.907 | 485 | 293 | 7 | 8 | 483 | 45 | 525 | 3.03e-90 | 288 |
Find 115 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTCCTCCTGCTTCTTT+TGG | 0.184387 | 3.4:+79842787 | None:intergenic |
| CTTCCATTTAAGCTTCTATT+TGG | 0.209135 | 3.4:+79840971 | None:intergenic |
| ATCAAATCTTTGGAATCTTA+TGG | 0.243314 | 3.4:-79843050 | MS.gene066834:CDS |
| GCATTCTACTGACCATTATA+CGG | 0.261311 | 3.4:+79842286 | None:intergenic |
| GCAAAACACTATCAAATCTT+TGG | 0.266126 | 3.4:-79843060 | MS.gene066834:CDS |
| TCCTCCAGTATTTCCATTAG+AGG | 0.271034 | 3.4:+79841294 | None:intergenic |
| CTTCCAAATAGAAGCTTAAA+TGG | 0.280847 | 3.4:-79840974 | MS.gene066834:CDS |
| TCTATCATGTCCACACATTC+TGG | 0.292323 | 3.4:-79840770 | MS.gene066834:CDS |
| AAAGAAATTTAAGGAGAAAA+TGG | 0.296087 | 3.4:+79840746 | None:intergenic |
| AAGAGTGCCTTGAGGTTTAC+AGG | 0.300573 | 3.4:-79844509 | MS.gene066834:CDS |
| ATCTCTAGAGTTAGACTTCC+TGG | 0.307135 | 3.4:+79842950 | None:intergenic |
| GATTTGCAGCTTCACCATTT+AGG | 0.323978 | 3.4:-79843082 | MS.gene066834:intron |
| CTTTCCTCAAGCGCATTTCC+CGG | 0.325728 | 3.4:+79843934 | None:intergenic |
| TCAAGGTATATCCTTCATTA+AGG | 0.332212 | 3.4:-79840867 | MS.gene066834:CDS |
| TCCCTTGCACAGCTCTGAAT+TGG | 0.337961 | 3.4:+79843898 | None:intergenic |
| CCCAATGGGTATCCAACAAC+TGG | 0.354408 | 3.4:-79840915 | MS.gene066834:CDS |
| ATCTATGTAGGTTCCTCTAA+TGG | 0.370668 | 3.4:-79841307 | MS.gene066834:intron |
| ACACAGCTTGTCCACAATCT+TGG | 0.385265 | 3.4:-79843613 | MS.gene066834:CDS |
| AGCTGAACGTGCCCGTATAA+TGG | 0.385407 | 3.4:-79842298 | MS.gene066834:CDS |
| CTTGGCGAACGATCTCTTCC+TGG | 0.402388 | 3.4:-79844396 | MS.gene066834:CDS |
| CTCATTTACTGTAACGATTG+AGG | 0.405166 | 3.4:+79843827 | None:intergenic |
| CCAAAAGAAGCAGGAGGAAC+TGG | 0.410765 | 3.4:-79842787 | MS.gene066834:CDS |
| GGTTCCTCTAATGGAAATAC+TGG | 0.415098 | 3.4:-79841298 | MS.gene066834:CDS |
| AGAATTTCTGCAGAAATTGC+AGG | 0.416093 | 3.4:-79843867 | MS.gene066834:CDS |
| CACAGCTTGTCCACAATCTT+GGG | 0.424296 | 3.4:-79843612 | MS.gene066834:CDS |
| TGTTGTTTGATCCCAGTTGT+TGG | 0.428436 | 3.4:+79840903 | None:intergenic |
| TTCGAGCAGGAAGGCTATAA+TGG | 0.429177 | 3.4:-79842524 | MS.gene066834:CDS |
| GGATCAAACAACATAAATTC+AGG | 0.435219 | 3.4:-79840893 | MS.gene066834:CDS |
| AAGCGCATTTCCCGGAGTGC+TGG | 0.442192 | 3.4:+79843942 | None:intergenic |
| TCAAGCTGGGGTGGAGTTGA+AGG | 0.444352 | 3.4:+79843568 | None:intergenic |
| TAAATTCACCTGCGTTTATG+AGG | 0.449706 | 3.4:+79842700 | None:intergenic |
| ATTTGGAAGGCGTCTACTGC+TGG | 0.453067 | 3.4:+79840988 | None:intergenic |
| TCATTTACTGTAACGATTGA+GGG | 0.455769 | 3.4:+79843828 | None:intergenic |
| AACATAAATTCAGGAAATCA+AGG | 0.473671 | 3.4:-79840884 | MS.gene066834:CDS |
| TTCAATCACTCCAGCACTCC+GGG | 0.473685 | 3.4:-79843952 | MS.gene066834:CDS |
| ATCCATGCTCATGAGGAGAT+TGG | 0.476554 | 3.4:+79842576 | None:intergenic |
| CCAGTTGTTGGATACCCATT+GGG | 0.477027 | 3.4:+79840915 | None:intergenic |
| AAGTGAAAGGGTACCCGTCC+AGG | 0.477643 | 3.4:+79844378 | None:intergenic |
| CTTCCTTCCATCCTTAATGA+AGG | 0.477715 | 3.4:+79840856 | None:intergenic |
| CCCAGTTGTTGGATACCCAT+TGG | 0.479704 | 3.4:+79840914 | None:intergenic |
| TCCGCACAAATCATTCAAGC+TGG | 0.482056 | 3.4:+79843554 | None:intergenic |
| CATTTAAGCTTCTATTTGGA+AGG | 0.482390 | 3.4:+79840975 | None:intergenic |
| TAACATACTAAGGCAAGAAA+AGG | 0.486755 | 3.4:-79841268 | MS.gene066834:CDS |
| ATTCTCCACACATGAACAAA+AGG | 0.488062 | 3.4:-79840940 | MS.gene066834:CDS |
| AACTCTAGAGATTGTCCAGC+AGG | 0.488428 | 3.4:-79842939 | MS.gene066834:intron |
| TGGAGGAATATAACATACTA+AGG | 0.491206 | 3.4:-79841278 | MS.gene066834:CDS |
| AGCTAGTCTGCATCAGAAGT+TGG | 0.492163 | 3.4:-79844457 | MS.gene066834:CDS |
| CCATGTTATCAATTTGCTGT+CGG | 0.492212 | 3.4:-79842996 | MS.gene066834:CDS |
| GAGATCGTTCGCCAAGGGAC+AGG | 0.492757 | 3.4:+79844403 | None:intergenic |
| CCGTGATATTGAGTTTATGT+AGG | 0.502204 | 3.4:+79843505 | None:intergenic |
| TGCAGAAATTGCAGGAAACT+CGG | 0.505191 | 3.4:-79843859 | MS.gene066834:CDS |
| TCAGCAGAGGTATCAGATCC+AGG | 0.511058 | 3.4:-79842968 | MS.gene066834:CDS |
| CCGACAGCAAATTGATAACA+TGG | 0.522933 | 3.4:+79842996 | None:intergenic |
| ACTCACCTACTCCTGTCCCT+TGG | 0.525401 | 3.4:-79844414 | MS.gene066834:CDS |
| AGGCGTCTACTGCTGGTGCT+TGG | 0.527547 | 3.4:+79840995 | None:intergenic |
| GGTATATCCTTCATTAAGGA+TGG | 0.530437 | 3.4:-79840863 | MS.gene066834:CDS |
| GGAATCCTTTCCCAAGATTG+TGG | 0.535210 | 3.4:+79843602 | None:intergenic |
| TCAGAAGTTGGCTGAAGCAG+AGG | 0.538192 | 3.4:-79844445 | MS.gene066834:CDS |
| CCGCACAAATCATTCAAGCT+GGG | 0.539404 | 3.4:+79843555 | None:intergenic |
| CACTCCGGGAAATGCGCTTG+AGG | 0.548570 | 3.4:-79843938 | MS.gene066834:CDS |
| CAAAAGAAGAGGCTTCGAGC+AGG | 0.554081 | 3.4:-79842537 | MS.gene066834:CDS |
| CGAACGATCTCTTCCTGGAC+GGG | 0.556832 | 3.4:-79844391 | MS.gene066834:intron |
| ATTCAATCACTCCAGCACTC+CGG | 0.557459 | 3.4:-79843953 | MS.gene066834:CDS |
| TTCCAATCTCCTCATGAGCA+TGG | 0.558030 | 3.4:-79842578 | MS.gene066834:CDS |
| TTGTTCATTTCTGTCCGTGA+AGG | 0.559381 | 3.4:+79842732 | None:intergenic |
| GGAGCTATTCCAAAAGAAGC+AGG | 0.561788 | 3.4:-79842796 | MS.gene066834:CDS |
| CTTGTCCACAATCTTGGGAA+AGG | 0.564387 | 3.4:-79843607 | MS.gene066834:CDS |
| GTCTTGCATATGAAAAGTAA+AGG | 0.564831 | 3.4:+79840802 | None:intergenic |
| GAATGAAAGACTACAGCAAG+TGG | 0.564847 | 3.4:-79843655 | MS.gene066834:CDS |
| AAAGATTGTCTATCACGGTA+AGG | 0.567215 | 3.4:+79843022 | None:intergenic |
| ATGAACAAAAGGCTCCCAAT+GGG | 0.571218 | 3.4:-79840929 | MS.gene066834:CDS |
| CATGAACAAAAGGCTCCCAA+TGG | 0.571401 | 3.4:-79840930 | MS.gene066834:CDS |
| ATCTGATACCTCTGCTGATG+AGG | 0.572829 | 3.4:+79842973 | None:intergenic |
| CATTCTACTGACCATTATAC+GGG | 0.573420 | 3.4:+79842287 | None:intergenic |
| ATTATCAGAATGAGTTGCAA+AGG | 0.573617 | 3.4:-79843776 | MS.gene066834:CDS |
| GGAGGATAAGAAAAGACAGC+AGG | 0.576273 | 3.4:-79841244 | MS.gene066834:intron |
| GCAGTCATGGGAAAAGAAGA+AGG | 0.577231 | 3.4:-79841065 | MS.gene066834:intron |
| CACACGTGGAGATTCCTTCA+CGG | 0.578207 | 3.4:-79842746 | MS.gene066834:CDS |
| GTTCGCCAAGGGACAGGAGT+AGG | 0.579437 | 3.4:+79844409 | None:intergenic |
| AGGATGGAAGGAAGATACAA+AGG | 0.580566 | 3.4:-79840847 | MS.gene066834:CDS |
| CATACTAAGGCAAGAAAAGG+AGG | 0.580847 | 3.4:-79841265 | MS.gene066834:CDS |
| TATCCTTCATTAAGGATGGA+AGG | 0.581539 | 3.4:-79840859 | MS.gene066834:CDS |
| ATAATGGTCAGTAGAATGCC+AGG | 0.582209 | 3.4:-79842282 | MS.gene066834:intron |
| AACCAATTCAGAGCTGTGCA+AGG | 0.584214 | 3.4:-79843900 | MS.gene066834:CDS |
| GCGAACGATCTCTTCCTGGA+CGG | 0.585459 | 3.4:-79844392 | MS.gene066834:CDS |
| AAAACAAAATCGGCTGGACA+AGG | 0.586347 | 3.4:-79843463 | MS.gene066834:intron |
| TGCATATGAAAAGTAAAGGT+AGG | 0.587797 | 3.4:+79840806 | None:intergenic |
| TCCTCTAATGGAAATACTGG+AGG | 0.594082 | 3.4:-79841295 | MS.gene066834:CDS |
| CAGGAAGAGATCGTTCGCCA+AGG | 0.594511 | 3.4:+79844397 | None:intergenic |
| GATATCAAGAGCAAAAGAAG+AGG | 0.598084 | 3.4:-79842548 | MS.gene066834:CDS |
| AGAAAATGGTCCAGAATGTG+TGG | 0.598316 | 3.4:+79840760 | None:intergenic |
| TAGCACGCGATGAGGAGCGC+TGG | 0.599164 | 3.4:-79842480 | MS.gene066834:CDS |
| ACCAATTCAGAGCTGTGCAA+GGG | 0.606025 | 3.4:-79843899 | MS.gene066834:CDS |
| AGAAGAGGCTTCGAGCAGGA+AGG | 0.616810 | 3.4:-79842533 | MS.gene066834:CDS |
| AGGAAGAGATCGTTCGCCAA+GGG | 0.618807 | 3.4:+79844398 | None:intergenic |
| GCAAAGGCTGTACAATGAGA+AGG | 0.620234 | 3.4:-79843760 | MS.gene066834:intron |
| CGACAGCAAATTGATAACAT+GGG | 0.621693 | 3.4:+79842997 | None:intergenic |
| CCAATGGGTATCCAACAACT+GGG | 0.627456 | 3.4:-79840914 | MS.gene066834:CDS |
| CGCACAAATCATTCAAGCTG+GGG | 0.628853 | 3.4:+79843556 | None:intergenic |
| ACTAAGGCAAGAAAAGGAGG+AGG | 0.629609 | 3.4:-79841262 | MS.gene066834:CDS |
| ACAAATCATTCAAGCTGGGG+TGG | 0.629680 | 3.4:+79843559 | None:intergenic |
| TGCTCATGAGGAGATTGGAA+TGG | 0.629793 | 3.4:+79842581 | None:intergenic |
| AATCGATACTCAGTCAGTAG+AGG | 0.634619 | 3.4:-79842342 | MS.gene066834:CDS |
| CCTACATAAACTCAATATCA+CGG | 0.648283 | 3.4:-79843505 | MS.gene066834:CDS |
| CCCAGCTTGAATGATTTGTG+CGG | 0.650581 | 3.4:-79843555 | MS.gene066834:CDS |
| ATAATTAGCCTCATAAACGC+AGG | 0.650670 | 3.4:-79842708 | MS.gene066834:intron |
| GAGTTGAAGGATGATTGAAG+AGG | 0.652754 | 3.4:+79843581 | None:intergenic |
| TCTGTTCATCCATGCTCATG+AGG | 0.663751 | 3.4:+79842569 | None:intergenic |
| GCTGTCGGCCTCATCAGCAG+AGG | 0.684776 | 3.4:-79842981 | MS.gene066834:CDS |
| GCTATTCCAAAAGAAGCAGG+AGG | 0.686349 | 3.4:-79842793 | MS.gene066834:CDS |
| GTGGATGTTAGCACGCGATG+AGG | 0.690361 | 3.4:-79842488 | MS.gene066834:CDS |
| CTGGCTAGAAGAATACAGCA+TGG | 0.700880 | 3.4:-79842461 | MS.gene066834:intron |
| TATGGAGCAAGAGTGCCTTG+AGG | 0.711477 | 3.4:-79844517 | MS.gene066834:CDS |
| GATATGCAAGAAATCACACG+TGG | 0.775049 | 3.4:-79842760 | MS.gene066834:CDS |
| ACATAAACTCAATATCACGG+TGG | 0.787284 | 3.4:-79843502 | MS.gene066834:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATGTATAAATATATAG+GGG | + | chr3.4:79843312-79843331 | None:intergenic | 10.0% |
| !! | CAATATATGTATAAATATAT+AGG | + | chr3.4:79843314-79843333 | None:intergenic | 10.0% |
| !! | TTATACATATATTGTTATAA+AGG | - | chr3.4:79843320-79843339 | MS.gene066834:intron | 10.0% |
| !!! | ATACATATTCATTTTTAAAA+TGG | + | chr3.4:79842611-79842630 | None:intergenic | 10.0% |
| !!! | TAATTATTAGTACTTTTATT+TGG | - | chr3.4:79841021-79841040 | MS.gene066834:CDS | 10.0% |
| !!! | TTAAATTTTTTTGTTATCTT+GGG | + | chr3.4:79843773-79843792 | None:intergenic | 10.0% |
| !! | TGATGTAAAAATATTGAAAA+CGG | + | chr3.4:79843823-79843842 | None:intergenic | 15.0% |
| !! | TTTATGAAGAAAAACAAAAT+CGG | - | chr3.4:79841797-79841816 | MS.gene066834:intron | 15.0% |
| !!! | AATTGACTTACATATATAAA+AGG | - | chr3.4:79842657-79842676 | MS.gene066834:intron | 15.0% |
| !!! | ATATATGTAAGTCAATTTTT+AGG | + | chr3.4:79842654-79842673 | None:intergenic | 15.0% |
| !!! | ATTGACTTACATATATAAAA+GGG | - | chr3.4:79842658-79842677 | MS.gene066834:intron | 15.0% |
| !!! | CTTAAATTTTTTTGTTATCT+TGG | + | chr3.4:79843774-79843793 | None:intergenic | 15.0% |
| !!! | TTCAATATTTTTACATCAAA+TGG | - | chr3.4:79843825-79843844 | MS.gene066834:CDS | 15.0% |
| !! | AAGATCAAAACATTATACTT+TGG | - | chr3.4:79843021-79843040 | MS.gene066834:CDS | 20.0% |
| !! | AGTCTATATAATTCTTCAAA+GGG | - | chr3.4:79843256-79843275 | MS.gene066834:intron | 20.0% |
| !! | CTAGAAAATATGTACTTAAA+AGG | - | chr3.4:79843221-79843240 | MS.gene066834:intron | 20.0% |
| !! | TAAGAATAAAGATACCATTA+AGG | + | chr3.4:79844164-79844183 | None:intergenic | 20.0% |
| !! | TTGACTTACATATATAAAAG+GGG | - | chr3.4:79842659-79842678 | MS.gene066834:intron | 20.0% |
| !!! | ATACTTTGAAAAATAAGACA+TGG | + | chr3.4:79841060-79841079 | None:intergenic | 20.0% |
| !!! | CAGTTTTAAAATATCCTTAA+TGG | - | chr3.4:79844147-79844166 | MS.gene066834:intron | 20.0% |
| !!! | TTATTGACTTAATAAAAGCA+TGG | + | chr3.4:79843926-79843945 | None:intergenic | 20.0% |
| !!! | TTTTCATCAAAATAACATTC+TGG | - | chr3.4:79841992-79842011 | MS.gene066834:intron | 20.0% |
| ! | AACATAAATTCAGGAAATCA+AGG | - | chr3.4:79844386-79844405 | MS.gene066834:intron | 25.0% |
| ! | AGTAAAAATGACTAGTAGTT+GGG | - | chr3.4:79843114-79843133 | MS.gene066834:intron | 25.0% |
| ! | CAGTCTATATAATTCTTCAA+AGG | - | chr3.4:79843255-79843274 | MS.gene066834:intron | 25.0% |
| ! | GAAAAACATCAATTTCTGTT+AGG | + | chr3.4:79841538-79841557 | None:intergenic | 25.0% |
| ! | GTAACAAAAAATATAAGCGA+CGG | - | chr3.4:79841739-79841758 | MS.gene066834:intron | 25.0% |
| ! | TAAAAGAAGACAAAACTTGA+AGG | - | chr3.4:79843447-79843466 | MS.gene066834:intron | 25.0% |
| ! | TAGTAAAAATGACTAGTAGT+TGG | - | chr3.4:79843113-79843132 | MS.gene066834:intron | 25.0% |
| ! | TATAAATTTCACTACACGAA+AGG | - | chr3.4:79842024-79842043 | MS.gene066834:intron | 25.0% |
| ! | TTGATCTTATCATATATACC+TGG | + | chr3.4:79843009-79843028 | None:intergenic | 25.0% |
| !! | CATTAGTGTTTTGTATACTA+CGG | + | chr3.4:79843378-79843397 | None:intergenic | 25.0% |
| !! | GTATTCCTTTAAAAACCATA+CGG | + | chr3.4:79843724-79843743 | None:intergenic | 25.0% |
| !! | GTTTTGTCTTCTTTTATATG+CGG | + | chr3.4:79843443-79843462 | None:intergenic | 25.0% |
| !! | TAAAGTTTTCTTGTATGATC+AGG | - | chr3.4:79843150-79843169 | MS.gene066834:intron | 25.0% |
| !! | TATTCCTTTAAAAACCATAC+GGG | + | chr3.4:79843723-79843742 | None:intergenic | 25.0% |
| !!! | ATCAAATCTTTGGAATCTTA+TGG | - | chr3.4:79842220-79842239 | MS.gene066834:intron | 25.0% |
| !!! | TAACATTACTTGTTTTACAG+AGG | + | chr3.4:79843691-79843710 | None:intergenic | 25.0% |
| ACTAGATTACTCCTTATGAA+GGG | + | chr3.4:79841912-79841931 | None:intergenic | 30.0% | |
| AGTATAAAACAGATAAGTCG+AGG | - | chr3.4:79841125-79841144 | MS.gene066834:intron | 30.0% | |
| ATGCAAAATGTTTCTTACAG+TGG | + | chr3.4:79843608-79843627 | None:intergenic | 30.0% | |
| ATTATCAGAATGAGTTGCAA+AGG | - | chr3.4:79841494-79841513 | MS.gene066834:intron | 30.0% | |
| CATTTAAGCTTCTATTTGGA+AGG | + | chr3.4:79844298-79844317 | None:intergenic | 30.0% | |
| CCTACATAAACTCAATATCA+CGG | - | chr3.4:79841765-79841784 | MS.gene066834:intron | 30.0% | |
| CGTAGTATACAAAACACTAA+TGG | - | chr3.4:79843376-79843395 | MS.gene066834:intron | 30.0% | |
| CTTCCAAATAGAAGCTTAAA+TGG | - | chr3.4:79844296-79844315 | MS.gene066834:intron | 30.0% | |
| CTTCCATTTAAGCTTCTATT+TGG | + | chr3.4:79844302-79844321 | None:intergenic | 30.0% | |
| GCAAAACACTATCAAATCTT+TGG | - | chr3.4:79842210-79842229 | MS.gene066834:intron | 30.0% | |
| GGATCAAACAACATAAATTC+AGG | - | chr3.4:79844377-79844396 | MS.gene066834:intron | 30.0% | |
| GTATCATAAGATATGCTTCT+GGG | + | chr3.4:79843801-79843820 | None:intergenic | 30.0% | |
| GTCTTGCATATGAAAAGTAA+AGG | + | chr3.4:79844471-79844490 | None:intergenic | 30.0% | |
| TAACATACTAAGGCAAGAAA+AGG | - | chr3.4:79844002-79844021 | MS.gene066834:intron | 30.0% | |
| TAATGGAAAAAGTTGAGAAG+TGG | - | chr3.4:79842763-79842782 | MS.gene066834:CDS | 30.0% | |
| TACTAGATTACTCCTTATGA+AGG | + | chr3.4:79841913-79841932 | None:intergenic | 30.0% | |
| TCAAGGTATATCCTTCATTA+AGG | - | chr3.4:79844403-79844422 | MS.gene066834:CDS | 30.0% | |
| TCATTTACTGTAACGATTGA+GGG | + | chr3.4:79841445-79841464 | None:intergenic | 30.0% | |
| TCTTACTTCCTCTTTATGTT+TGG | - | chr3.4:79844179-79844198 | MS.gene066834:intron | 30.0% | |
| TGCATATGAAAAGTAAAGGT+AGG | + | chr3.4:79844467-79844486 | None:intergenic | 30.0% | |
| TGGAGGAATATAACATACTA+AGG | - | chr3.4:79843992-79844011 | MS.gene066834:CDS | 30.0% | |
| TGTATCACTGTCATAAGAAT+TGG | + | chr3.4:79841966-79841985 | None:intergenic | 30.0% | |
| ! | ACTAATGGACCAAAAATTCA+CGG | - | chr3.4:79843391-79843410 | MS.gene066834:intron | 30.0% |
| ! | TTCAGTCTTGTAAAAAGTTG+AGG | + | chr3.4:79842410-79842429 | None:intergenic | 30.0% |
| !! | AACCTACATAGATGTCATTT+TGG | + | chr3.4:79843956-79843975 | None:intergenic | 30.0% |
| !! | ATGTAAGTCAATTTTTAGGC+TGG | + | chr3.4:79842650-79842669 | None:intergenic | 30.0% |
| !! | CTATTGCTTGTTATTATTCC+TGG | + | chr3.4:79840957-79840976 | None:intergenic | 30.0% |
| !!! | CAGATGTTTTTAAGTTCCTT+TGG | + | chr3.4:79841937-79841956 | None:intergenic | 30.0% |
| !!! | TTGATAGTGTTTTGCCTAAA+TGG | + | chr3.4:79842205-79842224 | None:intergenic | 30.0% |
| AAAGATTGTCTATCACGGTA+AGG | + | chr3.4:79842251-79842270 | None:intergenic | 35.0% | |
| ACACAGTACTTGAAGCTTAA+AGG | + | chr3.4:79842116-79842135 | None:intergenic | 35.0% | |
| ACATAAACTCAATATCACGG+TGG | - | chr3.4:79841768-79841787 | MS.gene066834:intron | 35.0% | |
| ACATTATACTTTGGACCAAC+TGG | - | chr3.4:79843030-79843049 | MS.gene066834:CDS | 35.0% | |
| ACTGCAAACCAAACATAAAG+AGG | + | chr3.4:79844190-79844209 | None:intergenic | 35.0% | |
| AGAATTTCTGCAGAAATTGC+AGG | - | chr3.4:79841403-79841422 | MS.gene066834:intron | 35.0% | |
| AGCATGGCATCTACTATAAA+AGG | + | chr3.4:79843910-79843929 | None:intergenic | 35.0% | |
| AGCCAAAATGACATCTATGT+AGG | - | chr3.4:79843951-79843970 | MS.gene066834:CDS | 35.0% | |
| ATCACGAGACTAAATAAGCA+GGG | - | chr3.4:79842090-79842109 | MS.gene066834:intron | 35.0% | |
| ATCACTGTCATAAGAATTGG+AGG | + | chr3.4:79841963-79841982 | None:intergenic | 35.0% | |
| ATCTATGTAGGTTCCTCTAA+TGG | - | chr3.4:79843963-79843982 | MS.gene066834:CDS | 35.0% | |
| ATTCTCCACACATGAACAAA+AGG | - | chr3.4:79844330-79844349 | MS.gene066834:intron | 35.0% | |
| CATTCTACTGACCATTATAC+GGG | + | chr3.4:79842986-79843005 | None:intergenic | 35.0% | |
| CCGTGATATTGAGTTTATGT+AGG | + | chr3.4:79841768-79841787 | None:intergenic | 35.0% | |
| CTAGATTACTCCTTATGAAG+GGG | + | chr3.4:79841911-79841930 | None:intergenic | 35.0% | |
| CTCATTTACTGTAACGATTG+AGG | + | chr3.4:79841446-79841465 | None:intergenic | 35.0% | |
| CTGTTCAATGTTGAATGAGA+AGG | + | chr3.4:79843507-79843526 | None:intergenic | 35.0% | |
| GAAGAATACTAACCCCTTAA+TGG | + | chr3.4:79841567-79841586 | None:intergenic | 35.0% | |
| GATATCAAGAGCAAAAGAAG+AGG | - | chr3.4:79842722-79842741 | MS.gene066834:CDS | 35.0% | |
| GCATTCTACTGACCATTATA+CGG | + | chr3.4:79842987-79843006 | None:intergenic | 35.0% | |
| GGGAAAAAGATTGTCTATCA+CGG | + | chr3.4:79842256-79842275 | None:intergenic | 35.0% | |
| GGTATATCCTTCATTAAGGA+TGG | - | chr3.4:79844407-79844426 | MS.gene066834:CDS | 35.0% | |
| GGTATCATAAGATATGCTTC+TGG | + | chr3.4:79843802-79843821 | None:intergenic | 35.0% | |
| GTTTACTATCGAGTACTAAC+TGG | + | chr3.4:79840926-79840945 | None:intergenic | 35.0% | |
| TAAATTCACCTGCGTTTATG+AGG | + | chr3.4:79842573-79842592 | None:intergenic | 35.0% | |
| TAACTGTACAGCCAGAAAAA+AGG | - | chr3.4:79841269-79841288 | MS.gene066834:CDS | 35.0% | |
| TAATGTGTTAGCTGTGAGAA+AGG | - | chr3.4:79841101-79841120 | MS.gene066834:intron | 35.0% | |
| TATCACGAGACTAAATAAGC+AGG | - | chr3.4:79842089-79842108 | MS.gene066834:intron | 35.0% | |
| TATCCTTCATTAAGGATGGA+AGG | - | chr3.4:79844411-79844430 | MS.gene066834:CDS | 35.0% | |
| TATCGAGTACTAACTGGATA+TGG | + | chr3.4:79840920-79840939 | None:intergenic | 35.0% | |
| TATCTCGCTCAAAAACTACT+TGG | + | chr3.4:79844238-79844257 | None:intergenic | 35.0% | |
| TCTGTCACTAAAAAAACTCG+AGG | - | chr3.4:79841471-79841490 | MS.gene066834:intron | 35.0% | |
| TGAAGAAAAACAAAATCGGC+TGG | - | chr3.4:79841801-79841820 | MS.gene066834:intron | 35.0% | |
| TGCTTATTTAGTCTCGTGAT+AGG | + | chr3.4:79842090-79842109 | None:intergenic | 35.0% | |
| TGTTATAAACTACTCCCGTA+TGG | - | chr3.4:79843706-79843725 | MS.gene066834:intron | 35.0% | |
| TTCTTACAGTGGCTTACAAT+AGG | + | chr3.4:79843597-79843616 | None:intergenic | 35.0% | |
| ! | ATAATTAGCCTCATAAACGC+AGG | - | chr3.4:79842562-79842581 | MS.gene066834:CDS | 35.0% |
| ! | ATGGTCTGATGTGTATTTTC+TGG | - | chr3.4:79843879-79843898 | MS.gene066834:CDS | 35.0% |
| ! | CGACAGCAAATTGATAACAT+GGG | + | chr3.4:79842276-79842295 | None:intergenic | 35.0% |
| ! | TACTCCCGTATGGTTTTTAA+AGG | - | chr3.4:79843716-79843735 | MS.gene066834:intron | 35.0% |
| ! | TACTTTTCATATGCAAGACG+AGG | - | chr3.4:79844472-79844491 | MS.gene066834:CDS | 35.0% |
| !! | CCATGTTATCAATTTGCTGT+CGG | - | chr3.4:79842274-79842293 | MS.gene066834:intron | 35.0% |
| !! | CTTGACAATTTGCTACACAA+TGG | - | chr3.4:79843551-79843570 | MS.gene066834:CDS | 35.0% |
| !! | TATGTTTGGTTTGCAGTCAT+GGG | - | chr3.4:79844193-79844212 | MS.gene066834:intron | 35.0% |
| !! | TTATGTTTGGTTTGCAGTCA+TGG | - | chr3.4:79844192-79844211 | MS.gene066834:intron | 35.0% |
| !!! | CTTTTTTCCTGTAAACCTCA+AGG | + | chr3.4:79840771-79840790 | None:intergenic | 35.0% |
| AAAACAAAATCGGCTGGACA+AGG | - | chr3.4:79841807-79841826 | MS.gene066834:intron | 40.0% | |
| AATCGATACTCAGTCAGTAG+AGG | - | chr3.4:79842928-79842947 | MS.gene066834:intron | 40.0% | |
| ACAAAAAGCGAGCAAGATGA+AGG | - | chr3.4:79842453-79842472 | MS.gene066834:intron | 40.0% | |
| ACTGGATATGGCTAAGTGAA+AGG | + | chr3.4:79840908-79840927 | None:intergenic | 40.0% | |
| AGAAAATGGTCCAGAATGTG+TGG | + | chr3.4:79844513-79844532 | None:intergenic | 40.0% | |
| AGGAGTAATCTAGTAGCCAA+AGG | - | chr3.4:79841918-79841937 | MS.gene066834:intron | 40.0% | |
| AGGATGGAAGGAAGATACAA+AGG | - | chr3.4:79844423-79844442 | MS.gene066834:CDS | 40.0% | |
| ATAATGGTCAGTAGAATGCC+AGG | - | chr3.4:79842988-79843007 | MS.gene066834:CDS | 40.0% | |
| ATACTAACCCCTTAATGGTG+CGG | + | chr3.4:79841562-79841581 | None:intergenic | 40.0% | |
| ATGAACAAAAGGCTCCCAAT+GGG | - | chr3.4:79844341-79844360 | MS.gene066834:intron | 40.0% | |
| ATGTGTCTGGTGACATTAGT+GGG | + | chr3.4:79843354-79843373 | None:intergenic | 40.0% | |
| CATAATCCAAGTGTGCTATC+AGG | - | chr3.4:79842900-79842919 | MS.gene066834:intron | 40.0% | |
| CATACTAAGGCAAGAAAAGG+AGG | - | chr3.4:79844005-79844024 | MS.gene066834:intron | 40.0% | |
| CATACTTACTCCCCTTCATA+AGG | - | chr3.4:79841898-79841917 | MS.gene066834:intron | 40.0% | |
| CTGGATATGGCTAAGTGAAA+GGG | + | chr3.4:79840907-79840926 | None:intergenic | 40.0% | |
| CTTCCTTCCATCCTTAATGA+AGG | + | chr3.4:79844417-79844436 | None:intergenic | 40.0% | |
| GAAGACAAAACTTGAAGGTG+TGG | - | chr3.4:79843452-79843471 | MS.gene066834:intron | 40.0% | |
| GAATGAAAGACTACAGCAAG+TGG | - | chr3.4:79841615-79841634 | MS.gene066834:intron | 40.0% | |
| GAGTTGAAGGATGATTGAAG+AGG | + | chr3.4:79841692-79841711 | None:intergenic | 40.0% | |
| GATAGTAAACAATCAGCACC+AGG | - | chr3.4:79840936-79840955 | MS.gene066834:CDS | 40.0% | |
| GATATGCAAGAAATCACACG+TGG | - | chr3.4:79842510-79842529 | MS.gene066834:CDS | 40.0% | |
| GATTTGCAGCTTCACCATTT+AGG | - | chr3.4:79842188-79842207 | MS.gene066834:intron | 40.0% | |
| GGTTCCTCTAATGGAAATAC+TGG | - | chr3.4:79843972-79843991 | MS.gene066834:CDS | 40.0% | |
| TAAGTTAGATACGTACCTGC+TGG | + | chr3.4:79842349-79842368 | None:intergenic | 40.0% | |
| TACACTCGCAGTTTCTTTCA+TGG | - | chr3.4:79843860-79843879 | MS.gene066834:CDS | 40.0% | |
| TCCTCCAGTATTTCCATTAG+AGG | + | chr3.4:79843979-79843998 | None:intergenic | 40.0% | |
| TCCTCTAATGGAAATACTGG+AGG | - | chr3.4:79843975-79843994 | MS.gene066834:CDS | 40.0% | |
| TCTATCATGTCCACACATTC+TGG | - | chr3.4:79844500-79844519 | MS.gene066834:CDS | 40.0% | |
| TGCAGAAATTGCAGGAAACT+CGG | - | chr3.4:79841411-79841430 | MS.gene066834:intron | 40.0% | |
| TGTACAGCCAGAAAAAAGGA+CGG | - | chr3.4:79841273-79841292 | MS.gene066834:CDS | 40.0% | |
| TTGTTCATTTCTGTCCGTGA+AGG | + | chr3.4:79842541-79842560 | None:intergenic | 40.0% | |
| ! | CCGACAGCAAATTGATAACA+TGG | + | chr3.4:79842277-79842296 | None:intergenic | 40.0% |
| ! | GTTTTTCACCGCACCATTAA+GGG | - | chr3.4:79841551-79841570 | MS.gene066834:intron | 40.0% |
| ! | TGTTGTTTGATCCCAGTTGT+TGG | + | chr3.4:79844370-79844389 | None:intergenic | 40.0% |
| ! | TGTTTTTCACCGCACCATTA+AGG | - | chr3.4:79841550-79841569 | MS.gene066834:intron | 40.0% |
| ! | TTTTTCACCGCACCATTAAG+GGG | - | chr3.4:79841552-79841571 | MS.gene066834:intron | 40.0% |
| !! | ATCTCTAGAGTTAGACTTCC+TGG | + | chr3.4:79842323-79842342 | None:intergenic | 40.0% |
| !!! | TTGCTGCTATTTTTCAGCTC+TGG | - | chr3.4:79843081-79843100 | MS.gene066834:intron | 40.0% |
| AACCAATTCAGAGCTGTGCA+AGG | - | chr3.4:79841370-79841389 | MS.gene066834:intron | 45.0% | |
| ACAAATCATTCAAGCTGGGG+TGG | + | chr3.4:79841714-79841733 | None:intergenic | 45.0% | |
| ACACAGCTTGTCCACAATCT+TGG | - | chr3.4:79841657-79841676 | MS.gene066834:intron | 45.0% | |
| ACCAATTCAGAGCTGTGCAA+GGG | - | chr3.4:79841371-79841390 | MS.gene066834:intron | 45.0% | |
| ACTAAGGCAAGAAAAGGAGG+AGG | - | chr3.4:79844008-79844027 | MS.gene066834:intron | 45.0% | |
| ATCCATGCTCATGAGGAGAT+TGG | + | chr3.4:79842697-79842716 | None:intergenic | 45.0% | |
| ATCTGATACCTCTGCTGATG+AGG | + | chr3.4:79842300-79842319 | None:intergenic | 45.0% | |
| ATTCAATCACTCCAGCACTC+CGG | - | chr3.4:79841317-79841336 | MS.gene066834:intron | 45.0% | |
| CACAGCTTGTCCACAATCTT+GGG | - | chr3.4:79841658-79841677 | MS.gene066834:intron | 45.0% | |
| CATGAACAAAAGGCTCCCAA+TGG | - | chr3.4:79844340-79844359 | MS.gene066834:intron | 45.0% | |
| CATGTGTCTGGTGACATTAG+TGG | + | chr3.4:79843355-79843374 | None:intergenic | 45.0% | |
| CCAATGGGTATCCAACAACT+GGG | - | chr3.4:79844356-79844375 | MS.gene066834:intron | 45.0% | |
| CCAGTTGTTGGATACCCATT+GGG | + | chr3.4:79844358-79844377 | None:intergenic | 45.0% | |
| CCGCACAAATCATTCAAGCT+GGG | + | chr3.4:79841718-79841737 | None:intergenic | 45.0% | |
| CGCACAAATCATTCAAGCTG+GGG | + | chr3.4:79841717-79841736 | None:intergenic | 45.0% | |
| CTGGCTAGAAGAATACAGCA+TGG | - | chr3.4:79842809-79842828 | MS.gene066834:CDS | 45.0% | |
| CTTGTCCACAATCTTGGGAA+AGG | - | chr3.4:79841663-79841682 | MS.gene066834:intron | 45.0% | |
| GCAAAGGCTGTACAATGAGA+AGG | - | chr3.4:79841510-79841529 | MS.gene066834:intron | 45.0% | |
| GCAGTCATGGGAAAAGAAGA+AGG | - | chr3.4:79844205-79844224 | MS.gene066834:intron | 45.0% | |
| GCTATTCCAAAAGAAGCAGG+AGG | - | chr3.4:79842477-79842496 | MS.gene066834:CDS | 45.0% | |
| GCTCAAAAACTACTTGGCTC+TGG | + | chr3.4:79844232-79844251 | None:intergenic | 45.0% | |
| GGAATCCTTTCCCAAGATTG+TGG | + | chr3.4:79841671-79841690 | None:intergenic | 45.0% | |
| GGAGCTATTCCAAAAGAAGC+AGG | - | chr3.4:79842474-79842493 | MS.gene066834:CDS | 45.0% | |
| GGAGGATAAGAAAAGACAGC+AGG | - | chr3.4:79844026-79844045 | MS.gene066834:intron | 45.0% | |
| GTACAGCCAGAAAAAAGGAC+GGG | - | chr3.4:79841274-79841293 | MS.gene066834:CDS | 45.0% | |
| TCCGCACAAATCATTCAAGC+TGG | + | chr3.4:79841719-79841738 | None:intergenic | 45.0% | |
| TCTCATCCTGATAGCACACT+TGG | + | chr3.4:79842909-79842928 | None:intergenic | 45.0% | |
| TCTGTTCATCCATGCTCATG+AGG | + | chr3.4:79842704-79842723 | None:intergenic | 45.0% | |
| TGCTCATGAGGAGATTGGAA+TGG | + | chr3.4:79842692-79842711 | None:intergenic | 45.0% | |
| TGTATACTACGGCATGTGTC+TGG | + | chr3.4:79843367-79843386 | None:intergenic | 45.0% | |
| TGTGTCTGGTGACATTAGTG+GGG | + | chr3.4:79843353-79843372 | None:intergenic | 45.0% | |
| TTCCAATCTCCTCATGAGCA+TGG | - | chr3.4:79842692-79842711 | MS.gene066834:intron | 45.0% | |
| TTCGAGCAGGAAGGCTATAA+TGG | - | chr3.4:79842746-79842765 | MS.gene066834:CDS | 45.0% | |
| ! | AACTCTAGAGATTGTCCAGC+AGG | - | chr3.4:79842331-79842350 | MS.gene066834:CDS | 45.0% |
| ! | AGCTAGTCTGCATCAGAAGT+TGG | - | chr3.4:79840813-79840832 | MS.gene066834:CDS | 45.0% |
| ! | CCCAGCTTGAATGATTTGTG+CGG | - | chr3.4:79841715-79841734 | MS.gene066834:intron | 45.0% |
| !! | AAGAGTGCCTTGAGGTTTAC+AGG | - | chr3.4:79840761-79840780 | MS.gene066834:CDS | 45.0% |
| !! | GAGCTTGCTCCGTGAATTTT+TGG | + | chr3.4:79843403-79843422 | None:intergenic | 45.0% |
| !! | TGTTATCTTGGGAAGTGCTG+AGG | + | chr3.4:79843762-79843781 | None:intergenic | 45.0% |
| !! | AATATATGTATAAATATATA+GGG | + | chr3.4:79843313-79843332 | None:intergenic | 5.0% |
| AGCTGAACGTGCCCGTATAA+TGG | - | chr3.4:79842972-79842991 | MS.gene066834:CDS | 50.0% | |
| AGGAAGAGATCGTTCGCCAA+GGG | + | chr3.4:79840875-79840894 | None:intergenic | 50.0% | |
| CAAAAGAAGAGGCTTCGAGC+AGG | - | chr3.4:79842733-79842752 | MS.gene066834:CDS | 50.0% | |
| CACACGTGGAGATTCCTTCA+CGG | - | chr3.4:79842524-79842543 | MS.gene066834:CDS | 50.0% | |
| CCAAAAGAAGCAGGAGGAAC+TGG | - | chr3.4:79842483-79842502 | MS.gene066834:CDS | 50.0% | |
| CCCAATGGGTATCCAACAAC+TGG | - | chr3.4:79844355-79844374 | MS.gene066834:intron | 50.0% | |
| CCCAGTTGTTGGATACCCAT+TGG | + | chr3.4:79844359-79844378 | None:intergenic | 50.0% | |
| CTGTGTGATTGCTCTCCAGT+TGG | + | chr3.4:79843048-79843067 | None:intergenic | 50.0% | |
| CTTTCCTCAAGCGCATTTCC+CGG | + | chr3.4:79841339-79841358 | None:intergenic | 50.0% | |
| GTGTCTGGTGACATTAGTGG+GGG | + | chr3.4:79843352-79843371 | None:intergenic | 50.0% | |
| TCAGAAGTTGGCTGAAGCAG+AGG | - | chr3.4:79840825-79840844 | MS.gene066834:CDS | 50.0% | |
| TTCAATCACTCCAGCACTCC+GGG | - | chr3.4:79841318-79841337 | MS.gene066834:intron | 50.0% | |
| ! | CCAGTTCCTCCTGCTTCTTT+TGG | + | chr3.4:79842486-79842505 | None:intergenic | 50.0% |
| ! | GGGAGCCTTTTGTTCATGTG+TGG | + | chr3.4:79844338-79844357 | None:intergenic | 50.0% |
| !! | ATTTGGAAGGCGTCTACTGC+TGG | + | chr3.4:79844285-79844304 | None:intergenic | 50.0% |
| !! | TCAGCAGAGGTATCAGATCC+AGG | - | chr3.4:79842302-79842321 | MS.gene066834:CDS | 50.0% |
| !! | TCCCTTGCACAGCTCTGAAT+TGG | + | chr3.4:79841375-79841394 | None:intergenic | 50.0% |
| !!! | AGCGTACCCGTCCTTTTTTC+TGG | + | chr3.4:79841283-79841302 | None:intergenic | 50.0% |
| ACTCACCTACTCCTGTCCCT+TGG | - | chr3.4:79840856-79840875 | MS.gene066834:CDS | 55.0% | |
| AGAAGAGGCTTCGAGCAGGA+AGG | - | chr3.4:79842737-79842756 | MS.gene066834:CDS | 55.0% | |
| CAGGAAGAGATCGTTCGCCA+AGG | + | chr3.4:79840876-79840895 | None:intergenic | 55.0% | |
| CGAACGATCTCTTCCTGGAC+GGG | - | chr3.4:79840879-79840898 | MS.gene066834:CDS | 55.0% | |
| CTTGGCGAACGATCTCTTCC+TGG | - | chr3.4:79840874-79840893 | MS.gene066834:CDS | 55.0% | |
| GCGAACGATCTCTTCCTGGA+CGG | - | chr3.4:79840878-79840897 | MS.gene066834:CDS | 55.0% | |
| GTGGATGTTAGCACGCGATG+AGG | - | chr3.4:79842782-79842801 | MS.gene066834:CDS | 55.0% | |
| TCAAGCTGGGGTGGAGTTGA+AGG | + | chr3.4:79841705-79841724 | None:intergenic | 55.0% | |
| TGGTGACATTAGTGGGGGCT+AGG | + | chr3.4:79843347-79843366 | None:intergenic | 55.0% | |
| !! | AAGTGAAAGGGTACCCGTCC+AGG | + | chr3.4:79840895-79840914 | None:intergenic | 55.0% |
| AAGCGCATTTCCCGGAGTGC+TGG | + | chr3.4:79841331-79841350 | None:intergenic | 60.0% | |
| AGGCGTCTACTGCTGGTGCT+TGG | + | chr3.4:79844278-79844297 | None:intergenic | 60.0% | |
| CACTCCGGGAAATGCGCTTG+AGG | - | chr3.4:79841332-79841351 | MS.gene066834:intron | 60.0% | |
| GAGATCGTTCGCCAAGGGAC+AGG | + | chr3.4:79840870-79840889 | None:intergenic | 60.0% | |
| GTTCGCCAAGGGACAGGAGT+AGG | + | chr3.4:79840864-79840883 | None:intergenic | 60.0% | |
| GCTGTCGGCCTCATCAGCAG+AGG | - | chr3.4:79842289-79842308 | MS.gene066834:CDS | 65.0% | |
| ! | TAGCACGCGATGAGGAGCGC+TGG | - | chr3.4:79842790-79842809 | MS.gene066834:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79840754 | 79844538 | 79840754 | ID=MS.gene066834 |
| chr3.4 | mRNA | 79840754 | 79844538 | 79840754 | ID=MS.gene066834.t1;Parent=MS.gene066834 |
| chr3.4 | exon | 79844392 | 79844538 | 79844392 | ID=MS.gene066834.t1.exon1;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79844392 | 79844538 | 79844392 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79843761 | 79844012 | 79843761 | ID=MS.gene066834.t1.exon2;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79843761 | 79844012 | 79843761 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79843464 | 79843676 | 79843464 | ID=MS.gene066834.t1.exon3;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79843464 | 79843676 | 79843464 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79842940 | 79843095 | 79842940 | ID=MS.gene066834.t1.exon4;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79842940 | 79843095 | 79842940 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79842709 | 79842868 | 79842709 | ID=MS.gene066834.t1.exon5;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79842709 | 79842868 | 79842709 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79842462 | 79842613 | 79842462 | ID=MS.gene066834.t1.exon6;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79842462 | 79842613 | 79842462 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79842283 | 79842370 | 79842283 | ID=MS.gene066834.t1.exon7;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79842283 | 79842370 | 79842283 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79842121 | 79842194 | 79842121 | ID=MS.gene066834.t1.exon8;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79842121 | 79842194 | 79842121 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79841245 | 79841319 | 79841245 | ID=MS.gene066834.t1.exon9;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79841245 | 79841319 | 79841245 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| chr3.4 | exon | 79840754 | 79841083 | 79840754 | ID=MS.gene066834.t1.exon10;Parent=MS.gene066834.t1 |
| chr3.4 | CDS | 79840754 | 79841083 | 79840754 | ID=cds.MS.gene066834.t1;Parent=MS.gene066834.t1 |
| Gene Sequence |
| Protein sequence |
