AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055103

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055103.t1 MTR_7g066340 77.521 476 92 2 1 461 1 476 0.0 736
MS.gene055103.t1 MTR_7g066310 65.525 467 83 4 9 461 4 406 0.0 582
MS.gene055103.t1 MTR_7g066350 66.667 456 135 7 1 449 1 446 0.0 578
MS.gene055103.t1 MTR_1g041315 63.758 447 141 6 7 436 9 451 0.0 552
MS.gene055103.t1 MTR_7g066280 66.667 435 59 3 91 461 1 413 0.0 545
MS.gene055103.t1 MTR_7g066260 60.086 466 159 7 6 454 9 464 0.0 529
MS.gene055103.t1 MTR_7g066400 58.155 466 146 7 1 449 1 434 4.47e-177 503
MS.gene055103.t1 MTR_7g066570 56.122 490 169 8 3 456 5 484 1.42e-169 489
MS.gene055103.t1 MTR_7g066360 56.522 460 175 8 6 455 8 452 1.96e-158 457
MS.gene055103.t1 MTR_7g012680 53.797 474 178 8 3 461 5 452 1.99e-154 446
MS.gene055103.t1 MTR_7g066290 55.702 456 164 9 6 453 9 434 1.69e-151 438
MS.gene055103.t1 MTR_7g058710 48.485 495 194 11 1 452 1 477 6.42e-140 410
MS.gene055103.t1 MTR_7g066580 47.541 488 156 14 18 452 1 441 8.25e-128 378
MS.gene055103.t1 MTR_7g058700 47.545 448 159 10 24 452 531 921 1.62e-115 361
MS.gene055103.t1 MTR_7g066430 41.650 497 232 12 12 460 4 490 1.88e-114 346
MS.gene055103.t1 MTR_7g066430 27.049 244 139 8 9 231 254 479 1.18e-12 70.1
MS.gene055103.t1 MTR_2g029400 43.524 471 157 10 6 441 8 404 3.41e-113 339
MS.gene055103.t1 MTR_7g066410 40.936 513 219 13 13 452 11 512 1.45e-111 339
MS.gene055103.t1 MTR_7g066490 41.372 452 208 13 12 459 16 414 7.90e-96 295
MS.gene055103.t1 MTR_7g066490 28.972 214 114 7 260 446 14 216 4.09e-11 65.1
MS.gene055103.t1 MTR_7g066480 39.254 456 228 10 11 459 15 428 6.90e-95 293
MS.gene055103.t1 MTR_7g062300 37.552 482 254 13 1 448 1 469 1.89e-92 288
MS.gene055103.t1 MTR_7g062280 36.768 495 254 13 5 452 3 485 5.47e-91 285
MS.gene055103.t1 MTR_7g063820 38.980 490 244 14 5 452 2 478 1.48e-89 281
MS.gene055103.t1 MTR_7g063660 35.876 485 255 12 7 452 4 471 4.01e-88 277
MS.gene055103.t1 MTR_7g063880 37.423 489 253 15 5 461 4 471 8.76e-88 276
MS.gene055103.t1 MTR_7g063900 38.980 490 247 11 5 452 3 482 1.76e-87 276
MS.gene055103.t1 MTR_7g063830 37.660 470 243 12 1 452 1 438 1.01e-85 270
MS.gene055103.t1 MTR_7g063890 38.259 494 240 13 11 456 26 502 4.25e-84 268
MS.gene055103.t1 MTR_4g019310 34.698 513 260 16 6 460 2 497 1.01e-82 264
MS.gene055103.t1 MTR_7g063920 36.134 476 234 9 1 452 1 430 4.43e-82 260
MS.gene055103.t1 MTR_7g063920 32.719 217 109 11 259 460 7 201 4.91e-15 77.4
MS.gene055103.t1 MTR_7g063840 36.066 488 247 16 1 448 1 463 8.46e-81 258
MS.gene055103.t1 MTR_4g017440 34.236 517 262 14 6 460 8 508 4.39e-79 254
MS.gene055103.t1 MTR_4g019340 34.576 483 248 14 10 440 35 501 4.45e-74 241
MS.gene055103.t1 MTR_3g007740 35.792 461 251 12 11 452 8 442 1.72e-73 238
MS.gene055103.t1 MTR_3g065200 35.699 465 207 15 10 439 1 408 3.26e-73 238
MS.gene055103.t1 MTR_4g017830 32.948 519 261 16 1 451 1 500 1.39e-72 238
MS.gene055103.t1 MTR_7g066680 46.154 299 98 6 214 449 37 335 4.59e-70 226
MS.gene055103.t1 MTR_4g017410 33.268 508 264 18 6 458 3 490 4.93e-70 231
MS.gene055103.t1 MTR_4g017610 33.126 483 253 14 15 449 16 476 3.53e-69 228
MS.gene055103.t1 MTR_7g063670 34.498 458 260 11 13 452 16 451 1.73e-66 220
MS.gene055103.t1 MTR_1g014060 53.456 217 91 5 21 233 9 219 5.00e-65 214
MS.gene055103.t1 MTR_1g014060 47.568 185 79 4 292 461 210 391 7.65e-39 145
MS.gene055103.t1 MTR_4g017470 30.039 516 259 10 1 456 1 474 1.35e-60 206
MS.gene055103.t1 MTR_7g066390 58.553 152 35 2 303 454 1 124 3.41e-48 163
MS.gene055103.t1 MTR_4g017550 30.533 488 225 20 41 450 20 471 4.56e-48 172
MS.gene055103.t1 MTR_7g063720 39.720 214 116 3 252 452 13 226 1.08e-39 143
MS.gene055103.t1 MTR_7g063720 28.205 234 133 9 3 231 17 220 9.73e-19 85.9
MS.gene055103.t1 MTR_7g062270 38.857 175 104 3 13 186 11 183 2.26e-33 130
MS.gene055103.t1 MTR_2g067310 45.087 173 55 4 23 195 58 190 6.72e-32 122
MS.gene055103.t1 MTR_7g100420 32.440 336 168 11 155 452 83 397 1.74e-28 116
MS.gene055103.t1 MTR_8g023240 23.732 493 305 14 1 453 29 490 4.08e-27 114
MS.gene055103.t1 MTR_1g115440 33.200 250 143 8 1 237 1 239 1.63e-26 107
MS.gene055103.t1 MTR_7g063850 31.878 229 120 5 262 459 66 289 5.14e-25 104
MS.gene055103.t1 MTR_7g063850 25.764 229 137 9 15 231 69 276 6.08e-12 66.6
MS.gene055103.t1 MTR_8g445860 30.769 247 145 7 4 237 5 238 3.05e-24 101
MS.gene055103.t1 MTR_8g445860 27.650 217 120 4 265 445 16 231 1.87e-19 87.8
MS.gene055103.t1 MTR_0150s0010 30.800 250 148 6 1 237 1 238 9.78e-20 88.6
MS.gene055103.t1 MTR_0150s0010 28.000 225 122 4 260 445 8 231 3.21e-18 84.3
MS.gene055103.t1 MTR_4g019330 32.275 189 92 5 276 460 32 188 1.37e-19 86.7
MS.gene055103.t1 MTR_7g063690 28.826 281 125 9 13 289 13 222 4.28e-19 86.7
MS.gene055103.t1 MTR_1g115455 28.685 251 140 8 6 237 3 233 2.63e-18 84.3
MS.gene055103.t1 MTR_4g019240 36.842 114 60 4 3 108 4 113 8.57e-15 72.8
MS.gene055103.t1 MTR_1g115450 40.000 90 49 1 7 96 2 86 4.21e-14 69.7
MS.gene055103.t1 MTR_7g063760 48.485 66 33 1 388 452 2 67 6.04e-14 67.0
MS.gene055103.t1 MTR_1g115470 40.000 105 55 3 12 114 6 104 3.12e-13 71.6
MS.gene055103.t1 MTR_0150s0030 36.264 91 52 2 6 95 2 87 2.48e-11 63.5
MS.gene055103.t1 MTR_8g044880 36.082 97 56 2 6 101 2 93 6.32e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055103.t1 AT3G09140 31.969 513 283 16 1 460 1 500 6.29e-61 207
MS.gene055103.t1 AT5G01120 30.271 479 284 11 15 448 12 485 1.39e-60 206
MS.gene055103.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene055103.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene055103.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene055103.t1 AT3G09140 30.241 539 286 16 1 460 1 528 6.35e-57 197
MS.gene055103.t1 AT5G01150 29.388 490 280 12 12 453 9 480 1.30e-55 192
MS.gene055103.t1 AT5G01140 29.193 483 275 12 12 460 9 458 3.45e-54 188
MS.gene055103.t1 AT3G09110 32.615 325 199 8 12 327 9 322 2.36e-51 177
MS.gene055103.t1 AT5G01130 28.992 476 282 14 1 452 1 444 5.90e-50 176
MS.gene055103.t1 AT5G37320 27.634 503 286 19 3 452 2 479 3.98e-41 153
MS.gene055103.t1 AT3G09120 30.818 318 199 8 11 316 5 313 1.47e-39 145
MS.gene055103.t1 AT3G09120 29.412 221 112 9 267 446 12 229 4.98e-12 67.4
MS.gene055103.t1 AT5G43240 28.779 344 193 9 165 460 28 367 1.25e-27 114

Find 82 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTATGTTGATATTA+AGG 0.164334 7.4:-38566610 None:intergenic
TAGAGCACCATTAACGTTTA+TGG 0.174129 7.4:+38569842 MS.gene055103:CDS
CCTCCAGAAATAGGGGATTT+TGG 0.181844 7.4:-38569813 None:intergenic
CAATGTTCAGTTTCATATTC+TGG 0.191679 7.4:-38566304 None:intergenic
GATCCAAAATCCCCTATTTC+TGG 0.204437 7.4:+38569810 MS.gene055103:CDS
CCGACCTCCGATCTGTTTCT+TGG 0.207965 7.4:-38569429 None:intergenic
CCATTTCCTCCACATCATTA+AGG 0.209295 7.4:-38569938 None:intergenic
CTAGCATATCCTCCAGAAAT+AGG 0.222209 7.4:-38569822 None:intergenic
TGAGCACCTGCTGTGTTTCT+TGG 0.223634 7.4:-38566278 None:intergenic
GTCAGACTTCATATTTAAAA+AGG 0.246204 7.4:+38569383 MS.gene055103:CDS
AGATTTGCGAAATTGAAAAT+AGG 0.270663 7.4:+38566369 MS.gene055103:CDS
CAAAGTTATCATTAGAGTTT+TGG 0.270973 7.4:+38566028 MS.gene055103:CDS
TCTTCCTTATAATTGTTATA+AGG 0.277945 7.4:-38569765 None:intergenic
TAAATTATCAATGCAGCTTA+TGG 0.282491 7.4:-38569622 None:intergenic
TAATCTTCTCAAATTGTCTT+TGG 0.289830 7.4:+38569344 MS.gene055103:CDS
GGGACTGTTCAAGTTTCTTC+AGG 0.312481 7.4:+38566390 MS.gene055103:CDS
TGTCATTGACTCCATGCTTC+TGG 0.316064 7.4:-38566565 None:intergenic
CGATTTCTTTACTCAAAATC+AGG 0.337067 7.4:-38566457 None:intergenic
AAACTTGCCGTAACAACATT+TGG 0.344783 7.4:-38566533 None:intergenic
GATACCTTATAACAATTATA+AGG 0.355482 7.4:+38569761 MS.gene055103:CDS
TAGCATATCCTCCAGAAATA+GGG 0.363628 7.4:-38569821 None:intergenic
GAGGAAATGGTCATTAATAT+TGG 0.367390 7.4:+38569951 MS.gene055103:CDS
TATAAGGTATCGGTAATATC+TGG 0.373860 7.4:-38569749 None:intergenic
TATTCCCTATTACCTCCTTC+TGG 0.379109 7.4:-38569974 None:intergenic
AAATGCTTGGATTAGTTAGT+AGG 0.380859 7.4:-38569704 None:intergenic
GCTTCTTAACATTGCGCTTA+GGG 0.394593 7.4:+38566117 MS.gene055103:CDS
CATTTCCTCCACATCATTAA+GGG 0.397517 7.4:-38569937 None:intergenic
GATTTGCGAAATTGAAAATA+GGG 0.405308 7.4:+38566370 MS.gene055103:CDS
TCTGTCACCATAAACGTTAA+TGG 0.410819 7.4:-38569849 None:intergenic
TTTATATGGTTGCAGGGTCT+CGG 0.412461 7.4:+38570078 MS.gene055103:intron
CGACCTCCGATCTGTTTCTT+GGG 0.414289 7.4:-38569428 None:intergenic
AGCTTCTTAACATTGCGCTT+AGG 0.417921 7.4:+38566116 MS.gene055103:CDS
AATATTGAAGCACTGAGCTT+TGG 0.420564 7.4:+38566170 MS.gene055103:CDS
CCTTAATGATGTGGAGGAAA+TGG 0.422441 7.4:+38569938 MS.gene055103:CDS
TATGTATAAAATACCATCAA+TGG 0.430351 7.4:-38569898 None:intergenic
TGTTATGCCAAATGTTGTTA+CGG 0.444432 7.4:+38566526 MS.gene055103:CDS
AAAGGAACAATGTGATGAAA+TGG 0.461572 7.4:+38569464 MS.gene055103:CDS
GGTCGGGATCGGTGAAGAAA+AGG 0.473742 7.4:+38569446 MS.gene055103:CDS
TTAAATATGAAGTCTGACAT+AGG 0.484007 7.4:-38569378 None:intergenic
CAAGAAACAGATCGGAGGTC+GGG 0.485070 7.4:+38569430 MS.gene055103:CDS
TTATAATTGTTATAAGGTAT+CGG 0.485993 7.4:-38569759 None:intergenic
AACAGATCGGAGGTCGGGAT+CGG 0.492134 7.4:+38569435 MS.gene055103:CDS
ACTCCAATGTCATCCATTGA+TGG 0.495461 7.4:+38569885 MS.gene055103:CDS
TCAGACTGCATGGAAATGCT+TGG 0.498154 7.4:-38569717 None:intergenic
TATCAACATAAGCAAGAAAG+AGG 0.508368 7.4:+38566616 MS.gene055103:CDS
GATCTTGTTTATTGAAGCAG+AGG 0.517035 7.4:+38569521 MS.gene055103:CDS
TTTCTCACCTTTCCCTTGGG+AGG 0.518315 7.4:+38569570 MS.gene055103:CDS
TTTATACATAGAAAGAATGA+AGG 0.527055 7.4:+38569911 MS.gene055103:CDS
TCTATTTGCTGAGGCAGAGA+AGG 0.537242 7.4:+38566073 MS.gene055103:CDS
TATGTACTGGTTGAGGCCGT+TGG 0.555448 7.4:-38570139 None:intergenic
TTAAATCTCCTCCAGAAGCA+TGG 0.561651 7.4:+38566554 MS.gene055103:CDS
GTTCCTGAGTTCAGACTGCA+TGG 0.563810 7.4:-38569727 None:intergenic
CAACACTCCTCCCAAGGGAA+AGG 0.566939 7.4:-38569577 None:intergenic
AGCATATCCTCCAGAAATAG+GGG 0.573043 7.4:-38569820 None:intergenic
TCAACATCTGCTTTGACCAA+CGG 0.573453 7.4:+38570123 MS.gene055103:CDS
GGTCATTAATATTGGCCAGA+AGG 0.578280 7.4:+38569959 MS.gene055103:CDS
CATATGCAACACTCCTCCCA+AGG 0.586923 7.4:-38569583 None:intergenic
ATCAATCCAAGAAACACAGC+AGG 0.592546 7.4:+38566272 MS.gene055103:CDS
CTCGTTCTCACAGAGGTAGT+AGG 0.593294 7.4:-38566348 None:intergenic
ATTTCCTCCACATCATTAAG+GGG 0.596639 7.4:-38569936 None:intergenic
ATACCATCAATGGATGACAT+TGG 0.597021 7.4:-38569888 None:intergenic
ACTAACCTATGTACTGGTTG+AGG 0.600521 7.4:-38570146 None:intergenic
AAATAAAGTTCTATTTGCTG+AGG 0.602370 7.4:+38566064 MS.gene055103:CDS
AGGGACCATTGCAAAACTTG+TGG 0.604088 7.4:+38566136 MS.gene055103:CDS
TTTAGACCCAAGAAACAGAT+CGG 0.608075 7.4:+38569422 MS.gene055103:CDS
TAGTGAACTAACCTATGTAC+TGG 0.608380 7.4:-38570152 None:intergenic
GTTTATGGTGACAGATGACT+TGG 0.612440 7.4:+38569857 MS.gene055103:CDS
TTTCCATGCAGTCTGAACTC+AGG 0.615979 7.4:+38569724 MS.gene055103:CDS
CATTGACTCCATGCTTCTGG+AGG 0.619328 7.4:-38566562 None:intergenic
CCAAGAAACAGATCGGAGGT+CGG 0.621418 7.4:+38569429 MS.gene055103:CDS
CGCAAATCTCGTTCTCACAG+AGG 0.626293 7.4:-38566355 None:intergenic
CCAAAATCCCCTATTTCTGG+AGG 0.627577 7.4:+38569813 MS.gene055103:CDS
CATTAATATTGGCCAGAAGG+AGG 0.629501 7.4:+38569962 MS.gene055103:CDS
AACGGCCTCAACCAGTACAT+AGG 0.634113 7.4:+38570141 MS.gene055103:CDS
GGCAGGAAGTGAGAAGCCAA+AGG 0.636977 7.4:+38570616 MS.gene055103:intron
GGAGTGTTGCATATGCTCGA+AGG 0.640903 7.4:+38569591 MS.gene055103:CDS
ACAGAGGTAGTAGGACTGCA+AGG 0.646553 7.4:-38566339 None:intergenic
ATATGCAACACTCCTCCCAA+GGG 0.663884 7.4:-38569582 None:intergenic
GTTGGTCAAAGCAGATGTTG+AGG 0.676855 7.4:-38570121 None:intergenic
TTTCCTCCACATCATTAAGG+GGG 0.685271 7.4:-38569935 None:intergenic
TCTATGGTCACAGACATGCA+AGG 0.694458 7.4:+38566241 MS.gene055103:CDS
AGACCCAAGAAACAGATCGG+AGG 0.726967 7.4:+38569425 MS.gene055103:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG - chr7.4:38569272-38569291 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG - chr7.4:38569273-38569292 None:intergenic 0.0%
!! ATAAATTAACATATATGTAA+CGG + chr7.4:38568647-38568666 MS.gene055103:intron 10.0%
!! TAAAAGAATTAGTTATAAAT+TGG + chr7.4:38570342-38570361 MS.gene055103:intron 10.0%
!!! ACAAAATTAACTTTAAAATA+GGG + chr7.4:38569138-38569157 MS.gene055103:intron 10.0%
!!! TAATGATTGAAAATTTTATA+GGG - chr7.4:38568854-38568873 None:intergenic 10.0%
!!! TACAAAATTAACTTTAAAAT+AGG + chr7.4:38569137-38569156 MS.gene055103:intron 10.0%
!! AAAACAATTATTTAGAAAAC+CGG - chr7.4:38566789-38566808 None:intergenic 15.0%
!! ACAATATTTGATTGTTTATA+TGG + chr7.4:38570064-38570083 MS.gene055103:intron 15.0%
!! TTATAATTGTTATAAGGTAT+CGG - chr7.4:38569762-38569781 None:intergenic 15.0%
!!! AAATTTTCAATCATTACTTT+TGG + chr7.4:38568858-38568877 MS.gene055103:intron 15.0%
!!! ATATGAGTTTACTTTAAAAT+AGG - chr7.4:38568886-38568905 None:intergenic 15.0%
!!! GTAATGATTGAAAATTTTAT+AGG - chr7.4:38568855-38568874 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr7.4:38569169-38569188 MS.gene055103:intron 15.0%
!!! TATGAGTTTACTTTAAAATA+GGG - chr7.4:38568885-38568904 None:intergenic 15.0%
!!! TCTTTTGATCTTTTAATATA+TGG - chr7.4:38567635-38567654 None:intergenic 15.0%
!!! TTTGTTATCTTTTAAATGTT+TGG - chr7.4:38567384-38567403 None:intergenic 15.0%
!!! TTTTAATTACTCAATTTGAA+TGG - chr7.4:38570433-38570452 None:intergenic 15.0%
!! AAGAATTAGTTATAAATTGG+AGG + chr7.4:38570345-38570364 MS.gene055103:intron 20.0%
!! AGAAATGATTGTGATAATAT+TGG - chr7.4:38567299-38567318 None:intergenic 20.0%
!! AGGTAAAACTTCTATTTAAA+TGG + chr7.4:38567903-38567922 MS.gene055103:intron 20.0%
!! ATCTTGATGAAAAATATCTA+TGG + chr7.4:38566225-38566244 MS.gene055103:CDS 20.0%
!! ATGACATATTTGCATAATAT+TGG + chr7.4:38568392-38568411 MS.gene055103:intron 20.0%
!! ATGTAAAAATCTAACATCAA+CGG - chr7.4:38567027-38567046 None:intergenic 20.0%
!! GATACCTTATAACAATTATA+AGG + chr7.4:38569761-38569780 MS.gene055103:CDS 20.0%
!! GGTAAAACTTCTATTTAAAT+GGG + chr7.4:38567904-38567923 MS.gene055103:intron 20.0%
!! TAATAATAATCTATGAAGCA+CGG - chr7.4:38568751-38568770 None:intergenic 20.0%
!! TAGAAAAAGAAGAGAATTAA+AGG + chr7.4:38570460-38570479 MS.gene055103:intron 20.0%
!! TATGTATAAAATACCATCAA+TGG - chr7.4:38569901-38569920 None:intergenic 20.0%
!! TCTTCCTTATAATTGTTATA+AGG - chr7.4:38569768-38569787 None:intergenic 20.0%
!! TGCTTCATAGATTATTATTA+GGG + chr7.4:38568751-38568770 MS.gene055103:intron 20.0%
!! TTTATACATAGAAAGAATGA+AGG + chr7.4:38569911-38569930 MS.gene055103:CDS 20.0%
!!! AAATATGTCATTTATGCTTT+TGG - chr7.4:38568383-38568402 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr7.4:38569165-38569184 None:intergenic 20.0%
!!! AATATGTCATTTATGCTTTT+GGG - chr7.4:38568382-38568401 None:intergenic 20.0%
!!! AGTTTTTAAAGTTTAAACTC+TGG - chr7.4:38570372-38570391 None:intergenic 20.0%
!!! ATGTATCATGAAGTTTTTTT+TGG - chr7.4:38570183-38570202 None:intergenic 20.0%
!!! ATTTGTTTTAGATATTTGTC+TGG - chr7.4:38566885-38566904 None:intergenic 20.0%
!!! GAAAAGTTGGTATATTTATA+AGG - chr7.4:38568794-38568813 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr7.4:38569168-38569187 MS.gene055103:intron 20.0%
!!! TATATTTCATGTGTTAGTTT+AGG - chr7.4:38568459-38568478 None:intergenic 20.0%
!!! TTTGTTTTAGATATTTGTCT+GGG - chr7.4:38566884-38566903 None:intergenic 20.0%
! AAAAATTAACAAACGTGTCA+AGG + chr7.4:38567485-38567504 MS.gene055103:intron 25.0%
! AAAATTAACAAACGTGTCAA+GGG + chr7.4:38567486-38567505 MS.gene055103:intron 25.0%
! AACCGTAGATGAATTAATAA+AGG + chr7.4:38568498-38568517 MS.gene055103:intron 25.0%
! AATGCTTTCGAACATTTAAT+CGG - chr7.4:38567440-38567459 None:intergenic 25.0%
! AGATTTGCGAAATTGAAAAT+AGG + chr7.4:38566369-38566388 MS.gene055103:CDS 25.0%
! AGCAAACTTTACTAATTTAG+TGG - chr7.4:38570402-38570421 None:intergenic 25.0%
! AGGAATCAAAAATGTATTTG+TGG + chr7.4:38566410-38566429 MS.gene055103:CDS 25.0%
! ATATGTAACTCTTGTATCTA+TGG - chr7.4:38566933-38566952 None:intergenic 25.0%
! GACCTTTATTAATTCATCTA+CGG - chr7.4:38568503-38568522 None:intergenic 25.0%
! GATTTGCGAAATTGAAAATA+GGG + chr7.4:38566370-38566389 MS.gene055103:CDS 25.0%
! GTCAGACTTCATATTTAAAA+AGG + chr7.4:38569383-38569402 MS.gene055103:CDS 25.0%
! GTGCTTCATAGATTATTATT+AGG + chr7.4:38568750-38568769 MS.gene055103:intron 25.0%
! TAAAAGATAACAAAGTCGAT+CGG + chr7.4:38567390-38567409 MS.gene055103:intron 25.0%
! TAAATTATCAATGCAGCTTA+TGG - chr7.4:38569625-38569644 None:intergenic 25.0%
! TAATCTTCTCAAATTGTCTT+TGG + chr7.4:38569344-38569363 MS.gene055103:CDS 25.0%
! TAGAAATAACGATATCACTT+TGG - chr7.4:38567338-38567357 None:intergenic 25.0%
! TCTTGCTTATGTTGATATTA+AGG - chr7.4:38566613-38566632 None:intergenic 25.0%
! TGATTATTATCTATGAAGCA+CGG + chr7.4:38566679-38566698 MS.gene055103:intron 25.0%
! TGTACATGCACATATAATAA+AGG - chr7.4:38570595-38570614 None:intergenic 25.0%
! TTAAATATGAAGTCTGACAT+AGG - chr7.4:38569381-38569400 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+TGG + chr7.4:38570595-38570614 MS.gene055103:intron 25.0%
! TTCACAATAGTTCACATTAA+GGG + chr7.4:38567119-38567138 MS.gene055103:intron 25.0%
! TTTACACGTGAGTATAATAT+AGG + chr7.4:38567059-38567078 MS.gene055103:intron 25.0%
! TTTCACAATAGTTCACATTA+AGG + chr7.4:38567118-38567137 MS.gene055103:intron 25.0%
!! AAATAAAGTTCTATTTGCTG+AGG + chr7.4:38566064-38566083 MS.gene055103:CDS 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr7.4:38569197-38569216 MS.gene055103:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr7.4:38569198-38569217 MS.gene055103:intron 25.0%
!! CAAAGTTATCATTAGAGTTT+TGG + chr7.4:38566028-38566047 MS.gene055103:CDS 25.0%
!! CTTAAATCTCTGATTTGAAT+AGG + chr7.4:38569317-38569336 MS.gene055103:intron 25.0%
!! TCAAAATCAGGAATTTTTCT+CGG - chr7.4:38566448-38566467 None:intergenic 25.0%
!!! CTGATTTTGAGTAAAGAAAT+CGG + chr7.4:38566458-38566477 MS.gene055103:CDS 25.0%
!!! TCCTATGTTTTTTACATTAG+CGG + chr7.4:38568678-38568697 MS.gene055103:intron 25.0%
!!! TTGTTTTGCAAGATTATCTA+TGG - chr7.4:38568424-38568443 None:intergenic 25.0%
AAACACAAAACAAGTGGTTT+AGG - chr7.4:38567806-38567825 None:intergenic 30.0%
AAAGGAACAATGTGATGAAA+TGG + chr7.4:38569464-38569483 MS.gene055103:CDS 30.0%
AACTTGAAGAATTTCGCTAT+TGG - chr7.4:38568208-38568227 None:intergenic 30.0%
AATAGTTCACATTAAGGGTT+TGG + chr7.4:38567124-38567143 MS.gene055103:intron 30.0%
ACCGCTAATGTAAAAAACAT+AGG - chr7.4:38568682-38568701 None:intergenic 30.0%
AGGAAAAATGAATGATCGAA+AGG + chr7.4:38570480-38570499 MS.gene055103:intron 30.0%
ATAGTTCACATTAAGGGTTT+GGG + chr7.4:38567125-38567144 MS.gene055103:intron 30.0%
ATGTCTATGTAAACTATGCA+AGG + chr7.4:38567711-38567730 MS.gene055103:intron 30.0%
CAAAGAGATTCAAGATGATT+TGG - chr7.4:38567563-38567582 None:intergenic 30.0%
CAATGTTCAGTTTCATATTC+TGG - chr7.4:38566307-38566326 None:intergenic 30.0%
CGATTTCTTTACTCAAAATC+AGG - chr7.4:38566460-38566479 None:intergenic 30.0%
GAGGAAATGGTCATTAATAT+TGG + chr7.4:38569951-38569970 MS.gene055103:CDS 30.0%
TAACATATATGTAACGGTGT+CGG + chr7.4:38568653-38568672 MS.gene055103:intron 30.0%
TATCAACATAAGCAAGAAAG+AGG + chr7.4:38566616-38566635 MS.gene055103:CDS 30.0%
TATTTCGCTATTAGCGAAAT+TGG - chr7.4:38567940-38567959 None:intergenic 30.0%
TGATTGTTTATATGGTTGCA+GGG + chr7.4:38570072-38570091 MS.gene055103:intron 30.0%
TGTCTATGTAAACTATGCAA+GGG + chr7.4:38567712-38567731 MS.gene055103:intron 30.0%
TGTTATGCCAAATGTTGTTA+CGG + chr7.4:38566526-38566545 MS.gene055103:CDS 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr7.4:38569184-38569203 MS.gene055103:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr7.4:38569203-38569184 None:intergenic 30.0%
TTGATGTCTCAATGAATCTA+GGG + chr7.4:38567769-38567788 MS.gene055103:intron 30.0%
TTGATTGTTTATATGGTTGC+AGG + chr7.4:38570071-38570090 MS.gene055103:intron 30.0%
TTTAGAGGGACTAAAACAAA+AGG + chr7.4:38569212-38569231 MS.gene055103:intron 30.0%
TTTCGAACATTTAATCGGTT+GGG - chr7.4:38567435-38567454 None:intergenic 30.0%
! AAGTTGAAGGAAAATTTTCG+AGG - chr7.4:38568826-38568845 None:intergenic 30.0%
! AGTTGAAGGAAAATTTTCGA+GGG - chr7.4:38568825-38568844 None:intergenic 30.0%
! TCAAATACTTTTCTCCAAGT+AGG + chr7.4:38570302-38570321 MS.gene055103:intron 30.0%
! TGTATTTTCCTGCACAAAAA+GGG + chr7.4:38568346-38568365 MS.gene055103:intron 30.0%
! TTGTATTTTCCTGCACAAAA+AGG + chr7.4:38568345-38568364 MS.gene055103:intron 30.0%
!! AAATGCTTGGATTAGTTAGT+AGG - chr7.4:38569707-38569726 None:intergenic 30.0%
!! AGTTATCATTAGAGTTTTGG+TGG + chr7.4:38566031-38566050 MS.gene055103:CDS 30.0%
!! CATGATACCAAGATTTTGAT+TGG + chr7.4:38570257-38570276 MS.gene055103:intron 30.0%
!! TATAAGGTATCGGTAATATC+TGG - chr7.4:38569752-38569771 None:intergenic 30.0%
!!! TTTTTTGCATACTTAGAGAG+AGG - chr7.4:38567851-38567870 None:intergenic 30.0%
AAACTTGCCGTAACAACATT+TGG - chr7.4:38566536-38566555 None:intergenic 35.0%
AATATAGGATCGTTTGCACA+GGG + chr7.4:38567074-38567093 MS.gene055103:intron 35.0%
AGAGAGAAACACAAAACAAG+TGG - chr7.4:38567812-38567831 None:intergenic 35.0%
AGATAGAACTATTTCGCTTG+CGG + chr7.4:38567207-38567226 MS.gene055103:intron 35.0%
AGCACAACCAATCAAAATCT+TGG - chr7.4:38570267-38570286 None:intergenic 35.0%
ATACCATCAATGGATGACAT+TGG - chr7.4:38569891-38569910 None:intergenic 35.0%
ATTTCCTCCACATCATTAAG+GGG - chr7.4:38569939-38569958 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG - chr7.4:38567681-38567700 None:intergenic 35.0%
CATTTCCTCCACATCATTAA+GGG - chr7.4:38569940-38569959 None:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG - chr7.4:38567770-38567789 None:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG + chr7.4:38567768-38567787 MS.gene055103:intron 35.0%
CTTTCGAACATTTAATCGGT+TGG - chr7.4:38567436-38567455 None:intergenic 35.0%
GAGGGACTAAAATGAAAAGT+TGG - chr7.4:38568807-38568826 None:intergenic 35.0%
TAATATAGGATCGTTTGCAC+AGG + chr7.4:38567073-38567092 MS.gene055103:intron 35.0%
TAGCATATCCTCCAGAAATA+GGG - chr7.4:38569824-38569843 None:intergenic 35.0%
TAGTGAACTAACCTATGTAC+TGG - chr7.4:38570155-38570174 None:intergenic 35.0%
TCTGTCACCATAAACGTTAA+TGG - chr7.4:38569852-38569871 None:intergenic 35.0%
TGAGCTCAGAAAAATGCTTA+AGG + chr7.4:38569664-38569683 MS.gene055103:CDS 35.0%
TGCACAAAAAGGGTAGAATA+AGG + chr7.4:38568356-38568375 MS.gene055103:intron 35.0%
TTTAGACCCAAGAAACAGAT+CGG + chr7.4:38569422-38569441 MS.gene055103:CDS 35.0%
! AAATTCTTCAAGTTTGCTCC+TGG + chr7.4:38568214-38568233 MS.gene055103:intron 35.0%
! ACTACGCTATTAGCGTATTT+TGG - chr7.4:38568053-38568072 None:intergenic 35.0%
! ATTAGCCACAAGTTTTGCAA+TGG - chr7.4:38566144-38566163 None:intergenic 35.0%
! CTACGCTATTAGCGTATTTT+GGG - chr7.4:38568052-38568071 None:intergenic 35.0%
! GATCTTGTTTATTGAAGCAG+AGG + chr7.4:38569521-38569540 MS.gene055103:CDS 35.0%
! TAGAAGTTTTACCTCTCTCT+TGG - chr7.4:38567897-38567916 None:intergenic 35.0%
! TAGAGCACCATTAACGTTTA+TGG + chr7.4:38569842-38569861 MS.gene055103:CDS 35.0%
! TTATTCTACCCTTTTTGTGC+AGG - chr7.4:38568357-38568376 None:intergenic 35.0%
!! AAGAGAAAAGAGTGTCACAA+AGG + chr7.4:38570507-38570526 MS.gene055103:intron 35.0%
!! AATATTGAAGCACTGAGCTT+TGG + chr7.4:38566170-38566189 MS.gene055103:CDS 35.0%
!! AGAGAAAAGAGTGTCACAAA+GGG + chr7.4:38570508-38570527 MS.gene055103:intron 35.0%
!!! TTTGTCTACTTGTTTTGCTG+AGG - chr7.4:38566012-38566031 None:intergenic 35.0%
AATAGCGTAGAATTCGCTGA+TGG + chr7.4:38568092-38568111 MS.gene055103:intron 40.0%
ACTCCAATGTCATCCATTGA+TGG + chr7.4:38569885-38569904 MS.gene055103:CDS 40.0%
ACTCTTGTATCTATGGTGTG+CGG - chr7.4:38566926-38566945 None:intergenic 40.0%
AGACATCAAGGATCTTGACA+TGG - chr7.4:38567758-38567777 None:intergenic 40.0%
AGCATATCCTCCAGAAATAG+GGG - chr7.4:38569823-38569842 None:intergenic 40.0%
AGCTTCTTAACATTGCGCTT+AGG + chr7.4:38566116-38566135 MS.gene055103:CDS 40.0%
AGTTATGCTATCAGCGTAAC+TGG - chr7.4:38568247-38568266 None:intergenic 40.0%
ATCAATCCAAGAAACACAGC+AGG + chr7.4:38566272-38566291 MS.gene055103:CDS 40.0%
CATTAACCAGACTACCTACT+TGG - chr7.4:38570319-38570338 None:intergenic 40.0%
CATTAATATTGGCCAGAAGG+AGG + chr7.4:38569962-38569981 MS.gene055103:CDS 40.0%
CCATTTCCTCCACATCATTA+AGG - chr7.4:38569941-38569960 None:intergenic 40.0%
CCTTAATGATGTGGAGGAAA+TGG + chr7.4:38569938-38569957 MS.gene055103:CDS 40.0%
CTAGCATATCCTCCAGAAAT+AGG - chr7.4:38569825-38569844 None:intergenic 40.0%
CTATTAGCGTAAAAGCTCCA+GGG - chr7.4:38568077-38568096 None:intergenic 40.0%
GATCCAAAATCCCCTATTTC+TGG + chr7.4:38569810-38569829 MS.gene055103:CDS 40.0%
GCGAAAACTCATGAAGAACA+TGG - chr7.4:38568030-38568049 None:intergenic 40.0%
GCTTCTTAACATTGCGCTTA+GGG + chr7.4:38566117-38566136 MS.gene055103:CDS 40.0%
GGTCATTAATATTGGCCAGA+AGG + chr7.4:38569959-38569978 MS.gene055103:CDS 40.0%
GTAAACTATGCAAGGGATGA+AGG + chr7.4:38567719-38567738 MS.gene055103:intron 40.0%
GTTATGCTATCAGCGTAACT+GGG - chr7.4:38568246-38568265 None:intergenic 40.0%
GTTTATGGTGACAGATGACT+TGG + chr7.4:38569857-38569876 MS.gene055103:CDS 40.0%
TATATGTGCATGTACATGGC+AGG + chr7.4:38570599-38570618 MS.gene055103:intron 40.0%
TATGAGTGTTACACAGGTGT+CGG - chr7.4:38566844-38566863 None:intergenic 40.0%
TATTAGCGTAAAAGCTCCAG+GGG - chr7.4:38568076-38568095 None:intergenic 40.0%
TCAACATCTGCTTTGACCAA+CGG + chr7.4:38570123-38570142 MS.gene055103:CDS 40.0%
TGTGCAGGAAAATACAAGCA+AGG - chr7.4:38568342-38568361 None:intergenic 40.0%
TTAAATCTCCTCCAGAAGCA+TGG + chr7.4:38566554-38566573 MS.gene055103:CDS 40.0%
TTATGCTATCAGCGTAACTG+GGG - chr7.4:38568245-38568264 None:intergenic 40.0%
TTTATATGGTTGCAGGGTCT+CGG + chr7.4:38570078-38570097 MS.gene055103:intron 40.0%
TTTCCTCCACATCATTAAGG+GGG - chr7.4:38569938-38569957 None:intergenic 40.0%
! AGTTTTCTCACCTTTCCCTT+GGG + chr7.4:38569567-38569586 MS.gene055103:CDS 40.0%
! TAGTTTTCTCACCTTTCCCT+TGG + chr7.4:38569566-38569585 MS.gene055103:CDS 40.0%
! TCACAAAGGGTGTGAAATCA+TGG + chr7.4:38570521-38570540 MS.gene055103:intron 40.0%
! TTTTCTCCAAGTAGGTAGTC+TGG + chr7.4:38570310-38570329 MS.gene055103:intron 40.0%
!! ACTAACCTATGTACTGGTTG+AGG - chr7.4:38570149-38570168 None:intergenic 40.0%
!! TTTTTACATTAGCGGTGTCG+CGG + chr7.4:38568686-38568705 MS.gene055103:intron 40.0%
ACGCTGATAGCATAACTCTC+TGG + chr7.4:38568250-38568269 MS.gene055103:intron 45.0%
AGCTCGTATGAGTGTTACAC+AGG - chr7.4:38566850-38566869 None:intergenic 45.0%
AGGGACCATTGCAAAACTTG+TGG + chr7.4:38566136-38566155 MS.gene055103:CDS 45.0%
ATATGCAACACTCCTCCCAA+GGG - chr7.4:38569585-38569604 None:intergenic 45.0%
ATGAAGCACGGATTCTGACA+CGG - chr7.4:38568739-38568758 None:intergenic 45.0%
ATTGGCCAGAAGGAGGTAAT+AGG + chr7.4:38569969-38569988 MS.gene055103:intron 45.0%
CAGTGAATAGTCCAAGAGAG+AGG + chr7.4:38567883-38567902 MS.gene055103:intron 45.0%
CGATATCACTTTGGACACGA+AGG - chr7.4:38567329-38567348 None:intergenic 45.0%
CTCATGAAGAACATGGCACA+AGG - chr7.4:38568023-38568042 None:intergenic 45.0%
GCTATTAGCGTAAAAGCTCC+AGG - chr7.4:38568078-38568097 None:intergenic 45.0%
GTTGGTCAAAGCAGATGTTG+AGG - chr7.4:38570124-38570143 None:intergenic 45.0%
TCAGACTGCATGGAAATGCT+TGG - chr7.4:38569720-38569739 None:intergenic 45.0%
TCGCTATTAGCGAAGCATGT+CGG + chr7.4:38567961-38567980 MS.gene055103:intron 45.0%
TCTATGGTCACAGACATGCA+AGG + chr7.4:38566241-38566260 MS.gene055103:CDS 45.0%
TTGGCCAGAAGGAGGTAATA+GGG + chr7.4:38569970-38569989 MS.gene055103:intron 45.0%
TTTCCATGCAGTCTGAACTC+AGG + chr7.4:38569724-38569743 MS.gene055103:CDS 45.0%
! CCTCCAGAAATAGGGGATTT+TGG - chr7.4:38569816-38569835 None:intergenic 45.0%
! GGGACTGTTCAAGTTTCTTC+AGG + chr7.4:38566390-38566409 MS.gene055103:CDS 45.0%
! TCTATTTGCTGAGGCAGAGA+AGG + chr7.4:38566073-38566092 MS.gene055103:CDS 45.0%
!! CCAAAATCCCCTATTTCTGG+AGG + chr7.4:38569813-38569832 MS.gene055103:CDS 45.0%
!! TGTCATTGACTCCATGCTTC+TGG - chr7.4:38566568-38566587 None:intergenic 45.0%
!!! AAAAAATTCTAAATTTTTTT+GGG - chr7.4:38568970-38568989 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+TGG + chr7.4:38569064-38569083 MS.gene055103:intron 5.0%
!!! AAAATTCTAATTTTTTTTTT+GGG + chr7.4:38569065-38569084 MS.gene055103:intron 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG + chr7.4:38569009-38569028 MS.gene055103:intron 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG - chr7.4:38568971-38568990 None:intergenic 5.0%
AACGGCCTCAACCAGTACAT+AGG + chr7.4:38570141-38570160 MS.gene055103:CDS 50.0%
ACAGAGGTAGTAGGACTGCA+AGG - chr7.4:38566342-38566361 None:intergenic 50.0%
AGACCCAAGAAACAGATCGG+AGG + chr7.4:38569425-38569444 MS.gene055103:CDS 50.0%
CAAGAAACAGATCGGAGGTC+GGG + chr7.4:38569430-38569449 MS.gene055103:CDS 50.0%
CATATGCAACACTCCTCCCA+AGG - chr7.4:38569586-38569605 None:intergenic 50.0%
CCAAGAAACAGATCGGAGGT+CGG + chr7.4:38569429-38569448 MS.gene055103:CDS 50.0%
CGCAAATCTCGTTCTCACAG+AGG - chr7.4:38566358-38566377 None:intergenic 50.0%
CTCGTTCTCACAGAGGTAGT+AGG - chr7.4:38566351-38566370 None:intergenic 50.0%
GAAGGTCCCCCTTAATGATG+TGG + chr7.4:38569929-38569948 MS.gene055103:CDS 50.0%
GAGATTGCTGCTGTTACGCT+TGG - chr7.4:38567246-38567265 None:intergenic 50.0%
GATGGCGACTTTCTTCAAGG+CGG + chr7.4:38568110-38568129 MS.gene055103:intron 50.0%
GTTACGCCATCAGCGAAATC+TGG - chr7.4:38568150-38568169 None:intergenic 50.0%
GTTCCTGAGTTCAGACTGCA+TGG - chr7.4:38569730-38569749 None:intergenic 50.0%
TATGAAGCACGGACACCTCT+AGG + chr7.4:38566690-38566709 MS.gene055103:intron 50.0%
TGAGCACCTGCTGTGTTTCT+TGG - chr7.4:38566281-38566300 None:intergenic 50.0%
TTCGCTCCAGATTTCGCTGA+TGG + chr7.4:38568141-38568160 MS.gene055103:intron 50.0%
TTTCTCACCTTTCCCTTGGG+AGG + chr7.4:38569570-38569589 MS.gene055103:CDS 50.0%
! ATGTGTCGTACGGGTGTCAT+AGG - chr7.4:38566760-38566779 None:intergenic 50.0%
! CGACCTCCGATCTGTTTCTT+GGG - chr7.4:38569431-38569450 None:intergenic 50.0%
! GCTGATGGCGACTTTCTTCA+AGG + chr7.4:38568107-38568126 MS.gene055103:intron 50.0%
!! AAGCATGTCGGCTTAAGTGG+TGG + chr7.4:38567973-38567992 MS.gene055103:intron 50.0%
!! CATTGACTCCATGCTTCTGG+AGG - chr7.4:38566565-38566584 None:intergenic 50.0%
!! GGAGTGTTGCATATGCTCGA+AGG + chr7.4:38569591-38569610 MS.gene055103:CDS 50.0%
!! TATGTACTGGTTGAGGCCGT+TGG - chr7.4:38570142-38570161 None:intergenic 50.0%
AACAGATCGGAGGTCGGGAT+CGG + chr7.4:38569435-38569454 MS.gene055103:CDS 55.0%
ACATGGCACAAGGACCAACG+TGG - chr7.4:38568013-38568032 None:intergenic 55.0%
ACGCTAATAGCGTAGTCCCC+TGG + chr7.4:38568057-38568076 MS.gene055103:intron 55.0%
CAACACTCCTCCCAAGGGAA+AGG - chr7.4:38569580-38569599 None:intergenic 55.0%
CCAACGTGGCATAACCCCAT+TGG - chr7.4:38567999-38568018 None:intergenic 55.0%
CCAATGGGGTTATGCCACGT+TGG + chr7.4:38567996-38568015 MS.gene055103:intron 55.0%
CCGTACGACACATGTCGAAC+CGG + chr7.4:38566767-38566786 MS.gene055103:intron 55.0%
CGGCTTAAGTGGTGGCCAAT+GGG + chr7.4:38567981-38568000 MS.gene055103:intron 55.0%
CGGTTCGACATGTGTCGTAC+GGG - chr7.4:38566769-38566788 None:intergenic 55.0%
GGCAGGAAGTGAGAAGCCAA+AGG + chr7.4:38570616-38570635 MS.gene055103:intron 55.0%
GGCTTAAGTGGTGGCCAATG+GGG + chr7.4:38567982-38568001 MS.gene055103:intron 55.0%
GGTCCCCCTTAATGATGTGG+AGG + chr7.4:38569932-38569951 MS.gene055103:CDS 55.0%
GGTCGGGATCGGTGAAGAAA+AGG + chr7.4:38569446-38569465 MS.gene055103:CDS 55.0%
GTCCATATCGTGTCGTGTCG+CGG + chr7.4:38568710-38568729 MS.gene055103:intron 55.0%
TCGGCTTAAGTGGTGGCCAA+TGG + chr7.4:38567980-38567999 MS.gene055103:intron 55.0%
! CCGACCTCCGATCTGTTTCT+TGG - chr7.4:38569432-38569451 None:intergenic 55.0%
! CCGGTTCGACATGTGTCGTA+CGG - chr7.4:38566770-38566789 None:intergenic 55.0%
! TCGCTGATGGCGTAACTGTC+TGG + chr7.4:38568154-38568173 MS.gene055103:intron 55.0%
!! AGGTGTCGGACATCGATCGT+AGG - chr7.4:38566830-38566849 None:intergenic 55.0%
!! GCGAAGCATGTCGGCTTAAG+TGG + chr7.4:38567970-38567989 MS.gene055103:intron 55.0%
AGCGACACGCCTAGTCCTAG+AGG - chr7.4:38566708-38566727 None:intergenic 60.0%
CACCGCGACACGACACGATA+TGG - chr7.4:38568715-38568734 None:intergenic 60.0%
CTATCAGCGTAACTGGGGCG+AGG - chr7.4:38568240-38568259 None:intergenic 60.0%
TGTCAGACACCGACGCGTGT+CGG - chr7.4:38566735-38566754 None:intergenic 60.0%
!! GCACGGACACCTCTAGGACT+AGG + chr7.4:38566696-38566715 MS.gene055103:intron 60.0%
TCGCTGTGTCCGACACGCGT+CGG + chr7.4:38566723-38566742 MS.gene055103:intron 65.0%
AGCGTAACTGGGGCGAGGCC+AGG - chr7.4:38568235-38568254 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 38565996 38570649 38565996 ID=MS.gene055103
chr7.4 mRNA 38565996 38570649 38565996 ID=MS.gene055103.t1;Parent=MS.gene055103
chr7.4 exon 38565996 38566637 38565996 ID=MS.gene055103.t1.exon1;Parent=MS.gene055103.t1
chr7.4 CDS 38565996 38566637 38565996 ID=cds.MS.gene055103.t1;Parent=MS.gene055103.t1
chr7.4 exon 38569339 38569983 38569339 ID=MS.gene055103.t1.exon2;Parent=MS.gene055103.t1
chr7.4 CDS 38569339 38569983 38569339 ID=cds.MS.gene055103.t1;Parent=MS.gene055103.t1
chr7.4 exon 38570093 38570162 38570093 ID=MS.gene055103.t1.exon3;Parent=MS.gene055103.t1
chr7.4 CDS 38570093 38570162 38570093 ID=cds.MS.gene055103.t1;Parent=MS.gene055103.t1
chr7.4 exon 38570621 38570649 38570621 ID=MS.gene055103.t1.exon4;Parent=MS.gene055103.t1
chr7.4 CDS 38570621 38570649 38570621 ID=cds.MS.gene055103.t1;Parent=MS.gene055103.t1
Gene Sequence

>MS.gene055103

ATGGCTGAAAATACCTCAGCAAAACAAGTAGACAAAGTTATCATTAGAGTTTTGGTGGACAAGAAGAAAAATAAAGTTCTATTTGCTGAGGCAGAGAAGGATTTTGTTGATGTTCTTTTGAGCTTCTTAACATTGCGCTTAGGGACCATTGCAAAACTTGTGGCTAATGACTCAAATATTGAAGCACTGAGCTTTGGCAGTATTAGTTCACTGTATCAAAGTGTGTCAGATCTTGATGAAAAATATCTATGGTCACAGACATGCAAGGAAATGCTTATCAATCCAAGAAACACAGCAGGTGCTCATTGCCAGAATATGAAACTGAACATTGACAATACTGATACCTTGCAGTCCTACTACCTCTGTGAGAACGAGATTTGCGAAATTGAAAATAGGGACTGTTCAAGTTTCTTCAGGAATCAAAAATGTATTTGTGGAAAGCTGTTGAACCGAGAAAAATTCCTGATTTTGAGTAAAGAAATCGGTTTTGTTAATGAAACGTCGACGTTTATTGTATCTGATGATCTTTATGTTATGCCAAATGTTGTTACGGCAAGTTTAAATCTCCTCCAGAAGCATGGAGTCAATGACATTGATGCTATTGATAAACAAATCCTTAATATCAACATAAGCAAGAAAGAGGTATGTTTTCTTATTCTAAGTTTGTATGACATATTTTTTGTTGATTATTATCTATGAAGCACGGACACCTCTAGGACTAGGCGTGTCGCTGTGTCCGACACGCGTCGGTGTCTGACACTCCTATGACACCCGTACGACACATGTCGAACCGGTTTTCTAAATAATTGTTTTTTTCTTTACTTCGACACTCCTACGATCGATGTCCGACACCTGTGTAACACTCATACGAGCTGTGTCAGACAACCCAGACAAATATCTAAAACAAATTTTTTTTCTCTCTTGCTTCCGCACACCATAGATACAAGAGTTACATATCTTTTAAGAAATGTTGATCAGTTATGAATTATAGACATTATAGTTGATTATATCATTTTTAGCTTTTTTGACCGTTGATGTTAGATTTTTACATGTCTAAAAACTATTTACACGTGAGTATAATATAGGATCGTTTGCACAGGGAGTTGCTTCAATCATAAGCGTTTTCACAATAGTTCACATTAAGGGTTTGGGTATAAGTTGTTTGTTTGTAAAACTATTTTTCTATTCGACAATAAAAATAAAACGAGAAGAGATAGAACTATTTCGCTTGCGGTTAGAGAAATCAACCAAGCGTAACAGCAGCAATCTCTCGATCAATTAACAGATTCTAGCTTTATAACCAATATTATCACAATCATTTCTACAATATCCTTCGTGTCCAAAGTGATATCGTTATTTCTAAAGTATCGTTTAAACATTCGTGTCCAAACATTTAAAAGATAACAAAGTCGATCGGATAACTTAATCGACGATTTCCCAACCGATTAAATGTTCGAAAGCATTAAGTTCTTGATTAAAAGCGATTATCAAAAATTAACAAACGTGTCAAGGGTGATAACATAAGATAGATTGTTATTCTAGTTCTAGATTCAAGAGTTCGTGTCCAAATCATCTTGAATCTCTTTGAAAGCATTAAAAGCAAGAATAACAACAATATTGAATCATTAAGCTAGAACCATATATTAAAAGATCAAAAGATTACATAATAGCTTGTTTGATTACCTCAATACTACAAGAGTAGATGATAGCTACACATGTCTATGTAAACTATGCAAGGGATGAAGGAAAGATGAAGATTCCATGTCAAGATCCTTGATGTCTCAATGAATCTAGGGTTGAATCTACTCCTAAACCACTTGTTTTGTGTTTCTCTCTCAAGAAATAGCTCTAACCTCTCTCTAAGTATGCAAAAAATATCTTATAAAACAGTGAATAGTCCAAGAGAGAGGTAAAACTTCTATTTAAATGGGCTGAGTTCAGCCAATTTCGCTAATAGCGAAATATTCGCTATTAGCGAAGCATGTCGGCTTAAGTGGTGGCCAATGGGGTTATGCCACGTTGGTCCTTGTGCCATGTTCTTCATGAGTTTTCGCCCAAAATACGCTAATAGCGTAGTCCCCTGGAGCTTTTACGCTAATAGCGTAGAATTCGCTGATGGCGACTTTCTTCAAGGCGGTTTAAGACTTCGCTCCAGATTTCGCTGATGGCGTAACTGTCTGGACTAATTTCGCTATTAGCGAAATATTCGCCAATAGCGAAATTCTTCAAGTTTGCTCCTGGCCTCGCCCCAGTTACGCTGATAGCATAACTCTCTGGAGAAATTTCGCTATCAGCGAAAAACTCGCTAATAACGAAATATTGTGAACTTTGACAATTCTTGCTCCTTGCTTGTATTTTCCTGCACAAAAAGGGTAGAATAAGGCCCAAAAGCATAAATGACATATTTGCATAATATTGGAGTTTTCCATAGATAATCTTGCAAAACAAGTCACTAAAATGCCTAAACTAACACATGAAATATATCACTTTTGAGCACTTATCAACCGTAGATGAATTAATAAAGGTCAAATACTATGATATCTTATTGTAGAACTTTTTCTAGTGACATAAATTGCTCAAGTTAGATGTGTATATATATATATATATATATATATATATGTATTTTAGTTTTCATTTTAGATCGTCTTTAAATAAATTAACATATATGTAACGGTGTCGGTGTCCTATGTTTTTTACATTAGCGGTGTCGCGGTGTCCATATCGTGTCGTGTCGCGGTGTCCGTGTCAGAATCCGTGCTTCATAGATTATTATTAGGGTTAAATATGTTTTTGATCCTTATAAATATACCAACTTTTCATTTTAGTCCCTCGAAAATTTTCCTTCAACTTTTAGTCCCTATAAAATTTTCAATCATTACTTTTGGTCCCTATTTTAAAGTAAACTCATATGTAGAATTTATATTTTTGAATCGAATTTTGCAGAAAAATTCATAATATTATAAGAATCTCTCCCAAAAAAATTTAGAATTTTTTAACAAAACATGAATTTAATATGAATTTTTATATTTTTTATGGTTAAATATTCATATTAAATTTATGTTTTGTTAAAAAATTCTAATTTTTTTTTTGGGAAAGATTTTTACAATATTCTACACATTTCTGCACAATTTCATTAAAAAATACAAAATTAACTTTAAAATAGGGACCAAAAGTAGTGATTGAAAATTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACAAAAGGTTGATATATTTATAGAGAACAAAAACATATTTAACCCTTATTATTATTATTATTATTATTATTATTATTTCTCTCACTAATTCTTAAATCTCTGATTTGAATAGGTAGTTAATCTTCTCAAATTGTCTTTGGTATCAAAAACTCCTATGTCAGACTTCATATTTAAAAAGGAACAATTTGTTAGTAATTTAGACCCAAGAAACAGATCGGAGGTCGGGATCGGTGAAGAAAAGGAACAATGTGATGAAATGGTTGTAAAAGTAGTGAGAAGAAAATCAAATAAGCAGATCTTGTTTATTGAAGCAGAGGAAGATTTTGCTGATTTTGTTTTTAGTTTTCTCACCTTTCCCTTGGGAGGAGTGTTGCATATGCTCGAAGGATTCTCTTCCATAAGCTGCATTGATAATTTATATAAGAGTGTGACTGAATTGAGCTCAGAAAAATGCTTAAGGTCACAGTATTTCAAAAACCTACTAACTAATCCAAGCATTTCCATGCAGTCTGAACTCAGGAACCAGATATTACCGATACCTTATAACAATTATAAGGAAGAAAATATATCATATAAATTTGTTGATCCAAAATCCCCTATTTCTGGAGGATATGCTAGAGCACCATTAACGTTTATGGTGACAGATGACTTGGTTGTCACTCCAATGTCATCCATTGATGGTATTTTATACATAGAAAGAATGAAGGTCCCCCTTAATGATGTGGAGGAAATGGTCATTAATATTGGCCAGAAGGAGGTAATAGGGAATATGTTCATCTTCATATCACACAGTCTTTCATTTTAATATTTCTTGTATCATCATATTTGTAACAACTAACAATATTTGATTGTTTATATGGTTGCAGGGTCTCGGCATACTTAAAGCTTCACTGACCTCAACATCTGCTTTGACCAACGGCCTCAACCAGTACATAGGTTAGTTCACTATTCAACCAAAAAAAACTTCATGATACATTATCATTTGTAATTATCATAAAAACGATACTAAAGCTCATATAGAAATTGTTTACATGATACCAAGATTTTGATTGGTTGTGCTTGTATACACTTCAAATCAAATACTTTTCTCCAAGTAGGTAGTCTGGTTAATGAGTTAAAAGAATTAGTTATAAATTGGAGGTCCAGAGTTTAAACTTTAAAAACTAACATAACCACTAAATTAGTAAAGTTTGCTTAGAAAAACCATTCAAATTGAGTAATTAAAAATGAGCATAGAAAAAGAAGAGAATTAAAGGAAAAATGAATGATCGAAAGGTGAGAAGAGAAAAGAGTGTCACAAAGGGTGTGAAATCATGGTCACTTGCTTGTTATCATGTTAATAATTTTGAATATGTGCTAATTACTCCTTTATTATATGTGCATGTACATGGCAGGAAGTGAGAAGCCAAAGGTAGAAAAATGA
Protein sequence

>MS.gene055103.t1

MAENTSAKQVDKVIIRVLVDKKKNKVLFAEAEKDFVDVLLSFLTLRLGTIAKLVANDSNIEALSFGSISSLYQSVSDLDEKYLWSQTCKEMLINPRNTAGAHCQNMKLNIDNTDTLQSYYLCENEICEIENRDCSSFFRNQKCICGKLLNREKFLILSKEIGFVNETSTFIVSDDLYVMPNVVTASLNLLQKHGVNDIDAIDKQILNINISKKEVVNLLKLSLVSKTPMSDFIFKKEQFVSNLDPRNRSEVGIGEEKEQCDEMVVKVVRRKSNKQILFIEAEEDFADFVFSFLTFPLGGVLHMLEGFSSISCIDNLYKSVTELSSEKCLRSQYFKNLLTNPSISMQSELRNQILPIPYNNYKEENISYKFVDPKSPISGGYARAPLTFMVTDDLVVTPMSSIDGILYIERMKVPLNDVEEMVINIGQKEGLGILKASLTSTSALTNGLNQYIGSEKPKVEK