Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067102.t1 | XP_013451319.1 | 91 | 885 | 75 | 1 | 1 | 880 | 1 | 885 | 0.00E+00 | 1547.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067102.t1 | A0A072U6K8 | 91.0 | 885 | 75 | 1 | 1 | 880 | 1 | 885 | 0.0e+00 | 1547.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051199 | MS.gene067102 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene067102 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene067102 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene067102 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene067102 | 0.831558 | 1.56E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene067102 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene067102 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene053296 | MS.gene067102 | 0.810819 | 9.53E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene067102 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene054791 | MS.gene067102 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene067102 | 0.811016 | 8.64E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene067102 | 0.815446 | 9.20E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene067102 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene056169 | MS.gene067102 | 0.824199 | 9.19E-54 | -1.69E-46 |
| MS.gene060519 | MS.gene067102 | 0.800242 | 1.58E-48 | -1.69E-46 |
| MS.gene060701 | MS.gene067102 | 0.801347 | 9.40E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067102.t1 | MTR_6g018770 | 93.785 | 885 | 50 | 1 | 1 | 880 | 1 | 885 | 0.0 | 1589 |
| MS.gene067102.t1 | MTR_7g082220 | 48.361 | 976 | 372 | 31 | 1 | 879 | 1 | 941 | 0.0 | 655 |
| MS.gene067102.t1 | MTR_4g008820 | 46.555 | 479 | 196 | 19 | 13 | 467 | 210 | 652 | 1.29e-81 | 277 |
| MS.gene067102.t1 | MTR_7g112030 | 36.538 | 104 | 64 | 2 | 770 | 873 | 807 | 908 | 1.50e-13 | 75.5 |
| MS.gene067102.t1 | MTR_1g083850 | 29.213 | 178 | 111 | 6 | 703 | 872 | 577 | 747 | 2.22e-13 | 74.7 |
| MS.gene067102.t1 | MTR_2g034810 | 25.000 | 184 | 119 | 7 | 698 | 875 | 753 | 923 | 7.89e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067102.t1 | AT1G67040 | 30.810 | 938 | 471 | 40 | 1 | 872 | 1 | 826 | 4.47e-80 | 276 |
| MS.gene067102.t1 | AT1G67040 | 30.704 | 938 | 470 | 41 | 1 | 872 | 1 | 824 | 2.42e-79 | 274 |
Find 158 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAAAATGAAGATTTCT+TGG | 0.196487 | 6.3:+14841468 | None:intergenic |
| ATGCATGAAGGCTGAGATTT+TGG | 0.209163 | 6.3:-14838890 | MS.gene067102:CDS |
| TTCTGTCACAATGCCGTTAT+TGG | 0.209571 | 6.3:+14841087 | None:intergenic |
| GATTCTTTGAACAAGTTTAA+AGG | 0.217010 | 6.3:-14842013 | MS.gene067102:CDS |
| TGAAGATGTGCTTCAAATTT+TGG | 0.251852 | 6.3:-14838722 | MS.gene067102:CDS |
| TTCATTGCTGAATTGGTTCT+TGG | 0.260531 | 6.3:-14839138 | MS.gene067102:CDS |
| TAGTTCACCTCTAAAGAAAA+AGG | 0.274374 | 6.3:-14840315 | MS.gene067102:CDS |
| ACAAATCATGTTGGATTATT+CGG | 0.275766 | 6.3:-14839555 | MS.gene067102:CDS |
| GATCTTGGAACCTGGTTTGC+AGG | 0.281086 | 6.3:-14841161 | MS.gene067102:CDS |
| ATCAATTCGGTAAACAAGTT+TGG | 0.298864 | 6.3:+14839236 | None:intergenic |
| AATTGCTGCCAAAACTATTA+TGG | 0.298910 | 6.3:-14838952 | MS.gene067102:CDS |
| TTTGGATTGTAGATTGCTAA+TGG | 0.300946 | 6.3:-14841631 | MS.gene067102:intron |
| CCTTCATGTTTCAACCGTTC+AGG | 0.309083 | 6.3:+14839318 | None:intergenic |
| CAAACCGCATGGAGGCTTAA+AGG | 0.309387 | 6.3:-14840729 | MS.gene067102:CDS |
| ACCAAATGGAGTTGGGAATT+AGG | 0.310684 | 6.3:+14841977 | None:intergenic |
| GACATTTGCCATTGAACATT+TGG | 0.315673 | 6.3:+14840069 | None:intergenic |
| TGAGTCACTCATTGGGAAAA+TGG | 0.316669 | 6.3:-14838789 | MS.gene067102:CDS |
| TACTACCTTGTTCATCTTAT+CGG | 0.321674 | 6.3:+14840349 | None:intergenic |
| TGCAAGCACATATATTCTTC+TGG | 0.326935 | 6.3:+14840769 | None:intergenic |
| GCCATTGAACATTTGGTCAT+TGG | 0.337243 | 6.3:+14840076 | None:intergenic |
| TAAACACACCATAATAGTTT+TGG | 0.339049 | 6.3:+14838944 | None:intergenic |
| AGTTATCTTCATTGCTGAAT+TGG | 0.339654 | 6.3:-14839145 | MS.gene067102:CDS |
| TGATGATGGTGAGGAGTCTT+TGG | 0.341754 | 6.3:-14841443 | MS.gene067102:CDS |
| AACAGAAGCTGAAAGAATTA+AGG | 0.344196 | 6.3:-14840205 | MS.gene067102:CDS |
| CATTTGACATTAGAATTGTT+TGG | 0.355599 | 6.3:+14840395 | None:intergenic |
| TTTAATCGAAACCAACTTAA+GGG | 0.357961 | 6.3:-14839012 | MS.gene067102:CDS |
| TCAGGGGTCGATGATGTCTT+TGG | 0.362655 | 6.3:+14840255 | None:intergenic |
| GAAAATGAGGAGTTGGTTAC+TGG | 0.364580 | 6.3:-14840176 | MS.gene067102:CDS |
| GGAAGATGCAAGAAAACATT+TGG | 0.365373 | 6.3:+14841126 | None:intergenic |
| GCCTAATTCCCAACTCCATT+TGG | 0.368909 | 6.3:-14841978 | MS.gene067102:intron |
| TCAGAACCTTGTCTGCTTGA+AGG | 0.375714 | 6.3:+14840458 | None:intergenic |
| TTTGCAATATCTTATCAATT+CGG | 0.382071 | 6.3:+14839223 | None:intergenic |
| TCTGGTATAGACAAGTCATT+AGG | 0.386944 | 6.3:-14841016 | MS.gene067102:CDS |
| TCATTTAACACAGGAAAGAT+AGG | 0.389980 | 6.3:-14839273 | MS.gene067102:CDS |
| GAAGAGTCCGAGAATTTCTT+CGG | 0.392103 | 6.3:-14841230 | MS.gene067102:CDS |
| ATCTCAGCCTTCATGCATAA+AGG | 0.401946 | 6.3:+14838895 | None:intergenic |
| AAGCTAGGTGGTGGTTGTAT+TGG | 0.402353 | 6.3:-14842680 | MS.gene067102:CDS |
| GATTTATCTCTCTTTGAAGA+TGG | 0.402536 | 6.3:+14841490 | None:intergenic |
| AATCAATCATGTTATAATTC+TGG | 0.408879 | 6.3:-14841034 | MS.gene067102:CDS |
| AACTAAACCAAGTAATTGAT+TGG | 0.409723 | 6.3:-14838816 | MS.gene067102:CDS |
| TTGGGAGATGAGTCACTCAT+TGG | 0.418329 | 6.3:-14838797 | MS.gene067102:CDS |
| CTCTTTCCCGAAGAAATTCT+CGG | 0.418867 | 6.3:+14841223 | None:intergenic |
| TTGGATTGTAGATTGCTAAT+GGG | 0.423160 | 6.3:-14841630 | MS.gene067102:intron |
| CTGGTATAGACAAGTCATTA+GGG | 0.423338 | 6.3:-14841015 | MS.gene067102:CDS |
| CACTTAAAACATCTTCTCTC+AGG | 0.424535 | 6.3:+14840237 | None:intergenic |
| TCATCTCCCAATCAATTACT+TGG | 0.431669 | 6.3:+14838809 | None:intergenic |
| CACATATATTCTTCTGGAAG+TGG | 0.436122 | 6.3:+14840775 | None:intergenic |
| GCCTCAGAAGCTTCGGAAAA+CGG | 0.442167 | 6.3:-14841386 | MS.gene067102:CDS |
| TTTGAGGCGGGTGTTGATAT+TGG | 0.445664 | 6.3:-14838745 | MS.gene067102:CDS |
| CAAACAGAAATCCCTTAAGT+TGG | 0.447740 | 6.3:+14839001 | None:intergenic |
| GTGAAAACATTTGAAACAAT+AGG | 0.449483 | 6.3:+14840941 | None:intergenic |
| TAAGAACAATTTATAGAGCC+AGG | 0.449521 | 6.3:+14839348 | None:intergenic |
| AAGAGTCCGAGAATTTCTTC+GGG | 0.450925 | 6.3:-14841229 | MS.gene067102:CDS |
| AGAAGAGCAGTAACTAGGTT+TGG | 0.451888 | 6.3:-14841352 | MS.gene067102:CDS |
| GAGTCTTGTAGCTAGGTTGA+TGG | 0.454113 | 6.3:-14841527 | MS.gene067102:CDS |
| ATTAAGGTCTAGAGAAAATG+AGG | 0.458749 | 6.3:-14840189 | MS.gene067102:CDS |
| TTTGGTCATTGGAACATGTT+TGG | 0.464261 | 6.3:+14840087 | None:intergenic |
| GTCTAGAGAAAATGAGGAGT+TGG | 0.467713 | 6.3:-14840183 | MS.gene067102:CDS |
| CTGTTTGTAGCCTGCAAACC+AGG | 0.470209 | 6.3:+14841151 | None:intergenic |
| TGTTCTTACCAAATGGAGTT+GGG | 0.472016 | 6.3:+14841970 | None:intergenic |
| GATGCAAATTTGATCTAGAA+AGG | 0.476115 | 6.3:-14840484 | MS.gene067102:CDS |
| GAAGCTTCCAAGACTGATCC+AGG | 0.477697 | 6.3:+14839504 | None:intergenic |
| GATTAAGAAGTGGGAATGTA+TGG | 0.479978 | 6.3:-14838848 | MS.gene067102:CDS |
| CACCGACTTCTCTTCAGCAT+CGG | 0.480466 | 6.3:-14840921 | MS.gene067102:CDS |
| ATCGAGACTACTGGAAGAAA+AGG | 0.481977 | 6.3:+14839482 | None:intergenic |
| TGAGCCTTCATCGAGACTAC+TGG | 0.485738 | 6.3:+14839473 | None:intergenic |
| TAAGAGTGAGATTAAGAAGT+GGG | 0.487969 | 6.3:-14838857 | MS.gene067102:CDS |
| AGTGGAAATAAAGACTTTGT+CGG | 0.490289 | 6.3:-14840563 | MS.gene067102:CDS |
| AGAAGCGGCTACTAAGATCT+TGG | 0.491388 | 6.3:-14841176 | MS.gene067102:CDS |
| AGTCAAGGCCTCAGAAGCTT+CGG | 0.491390 | 6.3:-14841393 | MS.gene067102:CDS |
| AGAGGTGAACTAAAGGTAGA+TGG | 0.495533 | 6.3:+14840326 | None:intergenic |
| TCTCAGTCCTGGATCAGTCT+TGG | 0.495904 | 6.3:-14839511 | MS.gene067102:CDS |
| ACTAAACCAAGTAATTGATT+GGG | 0.497729 | 6.3:-14838815 | MS.gene067102:CDS |
| TAACGGCATTGTGACAGAAA+TGG | 0.498435 | 6.3:-14841083 | MS.gene067102:CDS |
| TTTCTTTAGAGGTGAACTAA+AGG | 0.500467 | 6.3:+14840319 | None:intergenic |
| CATAAAACTCAAACACAAGA+AGG | 0.500478 | 6.3:-14840677 | MS.gene067102:CDS |
| TCAAAGTGTCCTACCAATAA+CGG | 0.502704 | 6.3:-14841100 | MS.gene067102:CDS |
| AAGATCATAGCTCATGTTGA+TGG | 0.503734 | 6.3:-14840833 | MS.gene067102:CDS |
| GAAATTCTCGGACTCTTCAA+AGG | 0.504286 | 6.3:+14841235 | None:intergenic |
| ATGTTCTTACCAAATGGAGT+TGG | 0.504634 | 6.3:+14841969 | None:intergenic |
| TCTAATGTCAAATGTAAAAG+AGG | 0.505745 | 6.3:-14840386 | MS.gene067102:CDS |
| ATTGGTAGGACACTTTGAAA+TGG | 0.506348 | 6.3:+14841105 | None:intergenic |
| ACGAGAGAAGAGCAGTAACT+AGG | 0.521472 | 6.3:-14841357 | MS.gene067102:CDS |
| TGGGAGATGAGTCACTCATT+GGG | 0.526532 | 6.3:-14838796 | MS.gene067102:CDS |
| TCCAATGACCAAATGTTCAA+TGG | 0.528320 | 6.3:-14840077 | MS.gene067102:CDS |
| AAGAAGAATAATCAAAAGCT+AGG | 0.529032 | 6.3:-14842695 | MS.gene067102:CDS |
| AGTGATGATGCTAGTGTGAA+TGG | 0.540323 | 6.3:-14842743 | MS.gene067102:CDS |
| AGTAGTCTCGATGAAGGCTC+AGG | 0.544009 | 6.3:-14839471 | MS.gene067102:intron |
| CATGGAGGCTTAAAGGATGA+TGG | 0.544031 | 6.3:-14840722 | MS.gene067102:CDS |
| TCTTCCAGTAGTCTCGATGA+AGG | 0.544529 | 6.3:-14839477 | MS.gene067102:CDS |
| TTAAGAGTGAGATTAAGAAG+TGG | 0.550047 | 6.3:-14838858 | MS.gene067102:CDS |
| AAGAAGTGGGAATGTATGGT+TGG | 0.555304 | 6.3:-14838844 | MS.gene067102:CDS |
| AAAATTCCTCTGCGTAGCAT+CGG | 0.555522 | 6.3:+14839032 | None:intergenic |
| CATGTTTCAACCGTTCAGGT+TGG | 0.559219 | 6.3:+14839322 | None:intergenic |
| TGTTTAAGTCATGGTGTGCA+TGG | 0.560555 | 6.3:-14838927 | MS.gene067102:CDS |
| ACTTAAAACATCTTCTCTCA+GGG | 0.561542 | 6.3:+14840238 | None:intergenic |
| CATGAGCTATGATCTTCTCC+TGG | 0.566492 | 6.3:+14840840 | None:intergenic |
| AGGTCAAAGCTGCGAATGCA+AGG | 0.569077 | 6.3:-14841420 | MS.gene067102:CDS |
| TGTAGTTCTTCTCAGAAGCC+AGG | 0.569110 | 6.3:-14840858 | MS.gene067102:CDS |
| AAACAAGTTTATTAGCGTGA+TGG | 0.570139 | 6.3:+14841260 | None:intergenic |
| CAGTGTGAGACAAATCATGT+TGG | 0.571406 | 6.3:-14839564 | MS.gene067102:CDS |
| ATTGCTAATGGGAACAGTCA+AGG | 0.571532 | 6.3:-14841619 | MS.gene067102:CDS |
| AAGATTGACAGAAAGCAAGC+TGG | 0.574839 | 6.3:-14839181 | MS.gene067102:CDS |
| TGACAGAAATGGCTGGAACT+CGG | 0.575576 | 6.3:-14841072 | MS.gene067102:CDS |
| AATAATCAAAAGCTAGGTGG+TGG | 0.577202 | 6.3:-14842689 | MS.gene067102:CDS |
| AATGGTAATCATCTCAGTCC+TGG | 0.577258 | 6.3:-14839522 | MS.gene067102:CDS |
| CGCCGATGCTGAAGAGAAGT+CGG | 0.577797 | 6.3:+14840919 | None:intergenic |
| CGAATGCAAGGCATGAGTCA+AGG | 0.578523 | 6.3:-14841408 | MS.gene067102:CDS |
| AGTCTTGTAGCTAGGTTGAT+GGG | 0.578858 | 6.3:-14841526 | MS.gene067102:CDS |
| AATTCTTGAAGAATCAATGC+AGG | 0.584695 | 6.3:+14840134 | None:intergenic |
| TTGCATCTATCTGCCTTCGT+AGG | 0.585296 | 6.3:+14840500 | None:intergenic |
| GCAACTTCAAGCACTGTGAG+TGG | 0.585693 | 6.3:-14840581 | MS.gene067102:CDS |
| GGCATTGTGACAGAAATGGC+TGG | 0.587128 | 6.3:-14841079 | MS.gene067102:CDS |
| AAGCACCGAGTCTTGTAGCT+AGG | 0.588985 | 6.3:-14841534 | MS.gene067102:CDS |
| GCTACTAAGATCTTGGAACC+TGG | 0.592217 | 6.3:-14841169 | MS.gene067102:CDS |
| AAGCTCAAGGTTGATAGAAG+CGG | 0.592843 | 6.3:-14841191 | MS.gene067102:CDS |
| TTATTCGGAACCTCTTGCAA+TGG | 0.593405 | 6.3:-14839540 | MS.gene067102:CDS |
| GAGATGATTACCATTGCAAG+AGG | 0.593654 | 6.3:+14839530 | None:intergenic |
| AGATGAGACTAACCAGGAGG+AGG | 0.594237 | 6.3:+14842587 | None:intergenic |
| GTGGGAATGTATGGTTGGCA+TGG | 0.594355 | 6.3:-14838839 | MS.gene067102:CDS |
| AATGTCACTAGGAGCAATGA+GGG | 0.595121 | 6.3:-14839114 | MS.gene067102:CDS |
| AAAGGCTCCTTTATGCATGA+AGG | 0.595904 | 6.3:-14838902 | MS.gene067102:CDS |
| TGGTTCTTGGAAATGTCACT+AGG | 0.598922 | 6.3:-14839125 | MS.gene067102:CDS |
| CCTGAACGGTTGAAACATGA+AGG | 0.602964 | 6.3:-14839318 | MS.gene067102:CDS |
| AAAGCCTAAGTGGTCGAACT+CGG | 0.604253 | 6.3:-14840532 | MS.gene067102:CDS |
| TCCTGTGTTAAATGATGCTG+CGG | 0.608805 | 6.3:+14839281 | None:intergenic |
| ATAAAACTCAAACACAAGAA+GGG | 0.612050 | 6.3:-14840676 | MS.gene067102:CDS |
| ATCAACCTAGCTACAAGACT+CGG | 0.612572 | 6.3:+14841529 | None:intergenic |
| AGGAAACCTTCAAGCAGACA+AGG | 0.614022 | 6.3:-14840464 | MS.gene067102:CDS |
| TTATCCGAGTTCGACCACTT+AGG | 0.615870 | 6.3:+14840528 | None:intergenic |
| ATGCAAGAAATGAGAAGCTG+TGG | 0.616016 | 6.3:+14839081 | None:intergenic |
| AAGAACAATTTATAGAGCCA+GGG | 0.617947 | 6.3:+14839349 | None:intergenic |
| AATGTCAAATGTAAAAGAGG+AGG | 0.620342 | 6.3:-14840383 | MS.gene067102:CDS |
| GTTCTTACGACCAACCTGAA+CGG | 0.622153 | 6.3:-14839332 | MS.gene067102:CDS |
| GTCACAATGCCGTTATTGGT+AGG | 0.622935 | 6.3:+14841091 | None:intergenic |
| TGATGGTGAGGAGTCTTTGG+AGG | 0.623700 | 6.3:-14841440 | MS.gene067102:CDS |
| GATTGATTGTGTATATCTTG+TGG | 0.628394 | 6.3:+14841049 | None:intergenic |
| TTCTGATAGTGATGATGGTG+AGG | 0.629680 | 6.3:-14841452 | MS.gene067102:CDS |
| TCCGCAGCATCATTTAACAC+AGG | 0.629948 | 6.3:-14839282 | MS.gene067102:CDS |
| GTCATGGTGTGCATGGACAA+AGG | 0.631811 | 6.3:-14838920 | MS.gene067102:CDS |
| TCGGATAAGATCTCCTACGA+AGG | 0.632427 | 6.3:-14840513 | MS.gene067102:CDS |
| ATTATGGTGTGTTTAAGTCA+TGG | 0.635508 | 6.3:-14838936 | MS.gene067102:CDS |
| ATTGATATCTGTTCTGAATG+CGG | 0.636306 | 6.3:-14840114 | MS.gene067102:CDS |
| AGAGTACATCTCGAAGCTCA+AGG | 0.642881 | 6.3:-14841204 | MS.gene067102:CDS |
| GTTCAATGGCAAATGTCCCA+AGG | 0.650827 | 6.3:-14840063 | MS.gene067102:intron |
| AAATGTCACTAGGAGCAATG+AGG | 0.653408 | 6.3:-14839115 | MS.gene067102:CDS |
| AAGAATAATCAAAAGCTAGG+TGG | 0.660457 | 6.3:-14842692 | MS.gene067102:CDS |
| GTCACTAGGAGCAATGAGGG+AGG | 0.676197 | 6.3:-14839111 | MS.gene067102:CDS |
| GGTTTGAATCAAAGCCTAAG+TGG | 0.679677 | 6.3:-14840542 | MS.gene067102:CDS |
| TGGTATAGACAAGTCATTAG+GGG | 0.687079 | 6.3:-14841014 | MS.gene067102:CDS |
| AAATACCGATAAGATGAACA+AGG | 0.690927 | 6.3:-14840354 | MS.gene067102:CDS |
| TCATCCTTTAAGCCTCCATG+CGG | 0.694997 | 6.3:+14840725 | None:intergenic |
| TCAGAAGCTTCGGAAAACGG+AGG | 0.698643 | 6.3:-14841383 | MS.gene067102:CDS |
| AGACAAGGTTCTGATGCACA+AGG | 0.700943 | 6.3:-14840449 | MS.gene067102:CDS |
| GATTCATCAAGCAAACCGCA+TGG | 0.702267 | 6.3:-14840740 | MS.gene067102:CDS |
| CTTAAAACATCTTCTCTCAG+GGG | 0.725373 | 6.3:+14840239 | None:intergenic |
| TCATCAAGCAAACCGCATGG+AGG | 0.732965 | 6.3:-14840737 | MS.gene067102:CDS |
| TTGCAACCGATGCTACGCAG+AGG | 0.744918 | 6.3:-14839038 | MS.gene067102:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATAATTTATATTTATT+TGG | - | chr6.3:14839769-14839788 | MS.gene067102:intron | 0.0% |
| !! | ATTTAAGAAAATAATAGAAA+TGG | + | chr6.3:14839156-14839175 | None:intergenic | 10.0% |
| !! | TTTCTTAAATAGATGAATAA+AGG | - | chr6.3:14839166-14839185 | MS.gene067102:CDS | 15.0% |
| !!! | CATTGATTATAATGAAAATA+AGG | + | chr6.3:14841492-14841511 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | - | chr6.3:14841639-14841658 | MS.gene067102:intron | 15.0% |
| !! | AATCAATCATGTTATAATTC+TGG | - | chr6.3:14840384-14840403 | MS.gene067102:CDS | 20.0% |
| !! | ATATGTTGGATATTAGTTAT+GGG | - | chr6.3:14841547-14841566 | MS.gene067102:CDS | 20.0% |
| !! | GAATATAATCAATGTATTGA+TGG | + | chr6.3:14841611-14841630 | None:intergenic | 20.0% |
| !! | TTTGCAATATCTTATCAATT+CGG | + | chr6.3:14842198-14842217 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTTTTCTTATACT+CGG | - | chr6.3:14841725-14841744 | MS.gene067102:intron | 20.0% |
| !!! | CAAATTTCAATCATTCTTTT+AGG | - | chr6.3:14839727-14839746 | MS.gene067102:intron | 20.0% |
| !!! | TGCAAAGTTTAAATTCTTTT+TGG | - | chr6.3:14842212-14842231 | MS.gene067102:intron | 20.0% |
| !!! | TTGTCTAATTGTTATTTCTT+TGG | - | chr6.3:14841409-14841428 | MS.gene067102:CDS | 20.0% |
| !!! | TTTTAATTGACATCGTTTTT+TGG | - | chr6.3:14841513-14841532 | MS.gene067102:CDS | 20.0% |
| ! | AAAAGCTTTCTTATAGATTG+CGG | - | chr6.3:14839521-14839540 | MS.gene067102:CDS | 25.0% |
| ! | AACAGTCTAAATTTCAAACT+CGG | + | chr6.3:14839654-14839673 | None:intergenic | 25.0% |
| ! | AACTAAACCAAGTAATTGAT+TGG | - | chr6.3:14842602-14842621 | MS.gene067102:CDS | 25.0% |
| ! | AAGAAGAATAATCAAAAGCT+AGG | - | chr6.3:14838723-14838742 | MS.gene067102:CDS | 25.0% |
| ! | ACAAATCATGTTGGATTATT+CGG | - | chr6.3:14841863-14841882 | MS.gene067102:intron | 25.0% |
| ! | ACTAAACCAAGTAATTGATT+GGG | - | chr6.3:14842603-14842622 | MS.gene067102:CDS | 25.0% |
| ! | ATAAAACTCAAACACAAGAA+GGG | - | chr6.3:14840742-14840761 | MS.gene067102:CDS | 25.0% |
| ! | ATCACCTACATTTACTAATA+AGG | + | chr6.3:14841461-14841480 | None:intergenic | 25.0% |
| ! | ATCAGAAAATGAAGATTTCT+TGG | + | chr6.3:14839953-14839972 | None:intergenic | 25.0% |
| ! | CATATGTTGGATATTAGTTA+TGG | - | chr6.3:14841546-14841565 | MS.gene067102:CDS | 25.0% |
| ! | CATTTGACATTAGAATTGTT+TGG | + | chr6.3:14841026-14841045 | None:intergenic | 25.0% |
| ! | GAGTATAAGAAAAAACTCTT+TGG | + | chr6.3:14841726-14841745 | None:intergenic | 25.0% |
| ! | GATTCTTTGAACAAGTTTAA+AGG | - | chr6.3:14839405-14839424 | MS.gene067102:intron | 25.0% |
| ! | TATATATCACCTATGAAACA+CGG | - | chr6.3:14838891-14838910 | MS.gene067102:CDS | 25.0% |
| ! | TATCATATGTTCTTACCAAA+TGG | + | chr6.3:14839458-14839477 | None:intergenic | 25.0% |
| ! | TATCCCTTATTAGTAAATGT+AGG | - | chr6.3:14841454-14841473 | MS.gene067102:CDS | 25.0% |
| ! | TATGTTGGATATTAGTTATG+GGG | - | chr6.3:14841548-14841567 | MS.gene067102:CDS | 25.0% |
| ! | TCACCTACATTTACTAATAA+GGG | + | chr6.3:14841460-14841479 | None:intergenic | 25.0% |
| ! | TCTAATGTCAAATGTAAAAG+AGG | - | chr6.3:14841032-14841051 | MS.gene067102:CDS | 25.0% |
| ! | TTTAATCGAAACCAACTTAA+GGG | - | chr6.3:14842406-14842425 | MS.gene067102:intron | 25.0% |
| ! | TTTCAAATGCGAAAAAAAGT+GGG | - | chr6.3:14839824-14839843 | MS.gene067102:intron | 25.0% |
| !! | ATATCCAACATATGATTTGT+AGG | + | chr6.3:14841540-14841559 | None:intergenic | 25.0% |
| !! | CAAAAAGTGATAATGAGATT+AGG | - | chr6.3:14841132-14841151 | MS.gene067102:CDS | 25.0% |
| !! | GTGAAAACATTTGAAACAAT+AGG | + | chr6.3:14840480-14840499 | None:intergenic | 25.0% |
| !! | TAAACACACCATAATAGTTT+TGG | + | chr6.3:14842477-14842496 | None:intergenic | 25.0% |
| !! | TTCAGTGTAATTTTATGTGT+TGG | - | chr6.3:14838969-14838988 | MS.gene067102:CDS | 25.0% |
| !! | TTGAAGATCTTGTAGATTTT+AGG | - | chr6.3:14842731-14842750 | MS.gene067102:CDS | 25.0% |
| !! | TTTTAATCGAAACCAACTTA+AGG | - | chr6.3:14842405-14842424 | MS.gene067102:intron | 25.0% |
| !! | TTTTCAAATGCGAAAAAAAG+TGG | - | chr6.3:14839823-14839842 | MS.gene067102:intron | 25.0% |
| !!! | AATATCGCCGTTTTTAAAAA+TGG | - | chr6.3:14839296-14839315 | MS.gene067102:CDS | 25.0% |
| !!! | ACAATGGCCATTTTTAAAAA+CGG | + | chr6.3:14839306-14839325 | None:intergenic | 25.0% |
| !!! | TGTTTGAGTTTTATGTTTGA+AGG | + | chr6.3:14840736-14840755 | None:intergenic | 25.0% |
| !!! | TTTTATTTAAGCTTGTGCTT+TGG | - | chr6.3:14841779-14841798 | MS.gene067102:intron | 25.0% |
| AAACAAGTTTATTAGCGTGA+TGG | + | chr6.3:14840161-14840180 | None:intergenic | 30.0% | |
| AAATACCGATAAGATGAACA+AGG | - | chr6.3:14841064-14841083 | MS.gene067102:CDS | 30.0% | |
| AACAGAAGCTGAAAGAATTA+AGG | - | chr6.3:14841213-14841232 | MS.gene067102:CDS | 30.0% | |
| AACTAAAAGTAGATGCAGAA+GGG | + | chr6.3:14841435-14841454 | None:intergenic | 30.0% | |
| AAGAACAATTTATAGAGCCA+GGG | + | chr6.3:14842072-14842091 | None:intergenic | 30.0% | |
| AAGAATAATCAAAAGCTAGG+TGG | - | chr6.3:14838726-14838745 | MS.gene067102:CDS | 30.0% | |
| AATGTCAAATGTAAAAGAGG+AGG | - | chr6.3:14841035-14841054 | MS.gene067102:CDS | 30.0% | |
| AATTACCATTGGATTGTGAT+CGG | - | chr6.3:14839582-14839601 | MS.gene067102:intron | 30.0% | |
| AATTCTTGAAGAATCAATGC+AGG | + | chr6.3:14841287-14841306 | None:intergenic | 30.0% | |
| AATTGCTGCCAAAACTATTA+TGG | - | chr6.3:14842466-14842485 | MS.gene067102:intron | 30.0% | |
| ACTTAAAACATCTTCTCTCA+GGG | + | chr6.3:14841183-14841202 | None:intergenic | 30.0% | |
| AGTGGAAATAAAGACTTTGT+CGG | - | chr6.3:14840855-14840874 | MS.gene067102:CDS | 30.0% | |
| AGTTATCTTCATTGCTGAAT+TGG | - | chr6.3:14842273-14842292 | MS.gene067102:intron | 30.0% | |
| ATAGAAAGAGAAAATGCACA+TGG | + | chr6.3:14841388-14841407 | None:intergenic | 30.0% | |
| ATCAAAGACATTAAAACGAG+AGG | + | chr6.3:14842019-14842038 | None:intergenic | 30.0% | |
| ATCAATTCGGTAAACAAGTT+TGG | + | chr6.3:14842185-14842204 | None:intergenic | 30.0% | |
| ATTAAGGTCTAGAGAAAATG+AGG | - | chr6.3:14841229-14841248 | MS.gene067102:CDS | 30.0% | |
| ATTATGGTGTGTTTAAGTCA+TGG | - | chr6.3:14842482-14842501 | MS.gene067102:intron | 30.0% | |
| CATAAAACTCAAACACAAGA+AGG | - | chr6.3:14840741-14840760 | MS.gene067102:CDS | 30.0% | |
| GATGCAAATTTGATCTAGAA+AGG | - | chr6.3:14840934-14840953 | MS.gene067102:CDS | 30.0% | |
| GATTGATTGTGTATATCTTG+TGG | + | chr6.3:14840372-14840391 | None:intergenic | 30.0% | |
| TAACTAAAAGTAGATGCAGA+AGG | + | chr6.3:14841436-14841455 | None:intergenic | 30.0% | |
| TAAGAACAATTTATAGAGCC+AGG | + | chr6.3:14842073-14842092 | None:intergenic | 30.0% | |
| TAAGAGTGAGATTAAGAAGT+GGG | - | chr6.3:14842561-14842580 | MS.gene067102:intron | 30.0% | |
| TACTACCTTGTTCATCTTAT+CGG | + | chr6.3:14841072-14841091 | None:intergenic | 30.0% | |
| TCATTTAACACAGGAAAGAT+AGG | - | chr6.3:14842145-14842164 | MS.gene067102:intron | 30.0% | |
| TGATCTTCAATTTGATTCCA+GGG | - | chr6.3:14842035-14842054 | MS.gene067102:intron | 30.0% | |
| TTAAGAGTGAGATTAAGAAG+TGG | - | chr6.3:14842560-14842579 | MS.gene067102:intron | 30.0% | |
| TTGATCTTCAATTTGATTCC+AGG | - | chr6.3:14842034-14842053 | MS.gene067102:intron | 30.0% | |
| TTGGATTGTAGATTGCTAAT+GGG | - | chr6.3:14839788-14839807 | MS.gene067102:intron | 30.0% | |
| TTTGGATTGTAGATTGCTAA+TGG | - | chr6.3:14839787-14839806 | MS.gene067102:intron | 30.0% | |
| ! | AACTACATCATTTTCATGAG+AGG | + | chr6.3:14840547-14840566 | None:intergenic | 30.0% |
| ! | ACTACATCATTTTCATGAGA+GGG | + | chr6.3:14840546-14840565 | None:intergenic | 30.0% |
| ! | ATTGATATCTGTTCTGAATG+CGG | - | chr6.3:14841304-14841323 | MS.gene067102:CDS | 30.0% |
| ! | GAACATATGATAGTTTGTGT+TGG | - | chr6.3:14839466-14839485 | MS.gene067102:intron | 30.0% |
| ! | GATTTATCTCTCTTTGAAGA+TGG | + | chr6.3:14839931-14839950 | None:intergenic | 30.0% |
| ! | TAGTTCACCTCTAAAGAAAA+AGG | - | chr6.3:14841103-14841122 | MS.gene067102:CDS | 30.0% |
| ! | TGAAGATGTGCTTCAAATTT+TGG | - | chr6.3:14842696-14842715 | MS.gene067102:CDS | 30.0% |
| ! | TGATTTTCTCAGATTATCAG+TGG | + | chr6.3:14838944-14838963 | None:intergenic | 30.0% |
| ! | TTTCTTTAGAGGTGAACTAA+AGG | + | chr6.3:14841102-14841121 | None:intergenic | 30.0% |
| ! | TTTTCTCTCAGCTATTTGAT+TGG | - | chr6.3:14838763-14838782 | MS.gene067102:CDS | 30.0% |
| !! | TCATTTTCTGATAGTGATGA+TGG | - | chr6.3:14839961-14839980 | MS.gene067102:intron | 30.0% |
| !! | TCTTTAGCATTGATACATCT+TGG | + | chr6.3:14839218-14839237 | None:intergenic | 30.0% |
| AAGATCATAGCTCATGTTGA+TGG | - | chr6.3:14840585-14840604 | MS.gene067102:CDS | 35.0% | |
| AATAATCAAAAGCTAGGTGG+TGG | - | chr6.3:14838729-14838748 | MS.gene067102:CDS | 35.0% | |
| ACAAATTCCACGTATTCACA+CGG | - | chr6.3:14839549-14839568 | MS.gene067102:CDS | 35.0% | |
| ATGTTCTTACCAAATGGAGT+TGG | + | chr6.3:14839452-14839471 | None:intergenic | 35.0% | |
| ATTTAAGCTTGTGCTTTGGT+TGG | - | chr6.3:14841783-14841802 | MS.gene067102:intron | 35.0% | |
| CAAACAGAAATCCCTTAAGT+TGG | + | chr6.3:14842420-14842439 | None:intergenic | 35.0% | |
| CACAAGAAGAATCAGAACAA+TGG | + | chr6.3:14839322-14839341 | None:intergenic | 35.0% | |
| CACTTAAAACATCTTCTCTC+AGG | + | chr6.3:14841184-14841203 | None:intergenic | 35.0% | |
| CATTGTTCTGATTCTTCTTG+TGG | - | chr6.3:14839320-14839339 | MS.gene067102:CDS | 35.0% | |
| CGATTGAGAGAGTTGTAAAA+TGG | - | chr6.3:14839268-14839287 | MS.gene067102:CDS | 35.0% | |
| CTGGTATAGACAAGTCATTA+GGG | - | chr6.3:14840403-14840422 | MS.gene067102:CDS | 35.0% | |
| CTTAAAACATCTTCTCTCAG+GGG | + | chr6.3:14841182-14841201 | None:intergenic | 35.0% | |
| GACATTTGCCATTGAACATT+TGG | + | chr6.3:14841352-14841371 | None:intergenic | 35.0% | |
| GATTAAGAAGTGGGAATGTA+TGG | - | chr6.3:14842570-14842589 | MS.gene067102:intron | 35.0% | |
| GGAAGATGCAAGAAAACATT+TGG | + | chr6.3:14840295-14840314 | None:intergenic | 35.0% | |
| GTCACCTCAATATCTAATGA+GGG | + | chr6.3:14839108-14839127 | None:intergenic | 35.0% | |
| GTCAGTATTAATGACGTGAT+TGG | - | chr6.3:14841671-14841690 | MS.gene067102:intron | 35.0% | |
| TCATCTCCCAATCAATTACT+TGG | + | chr6.3:14842612-14842631 | None:intergenic | 35.0% | |
| TCCAATGACCAAATGTTCAA+TGG | - | chr6.3:14841341-14841360 | MS.gene067102:CDS | 35.0% | |
| TCTGGTATAGACAAGTCATT+AGG | - | chr6.3:14840402-14840421 | MS.gene067102:CDS | 35.0% | |
| TGCAAGCACATATATTCTTC+TGG | + | chr6.3:14840652-14840671 | None:intergenic | 35.0% | |
| TGGTATAGACAAGTCATTAG+GGG | - | chr6.3:14840404-14840423 | MS.gene067102:CDS | 35.0% | |
| TGGTCCTACAAATCATATGT+TGG | - | chr6.3:14841533-14841552 | MS.gene067102:CDS | 35.0% | |
| TGTATTAGATGAGACTAACC+AGG | + | chr6.3:14838840-14838859 | None:intergenic | 35.0% | |
| TGTCACCTCAATATCTAATG+AGG | + | chr6.3:14839109-14839128 | None:intergenic | 35.0% | |
| TGTTCTTACCAAATGGAGTT+GGG | + | chr6.3:14839451-14839470 | None:intergenic | 35.0% | |
| TTCATAGTATCACACACTTG+AGG | - | chr6.3:14839064-14839083 | MS.gene067102:CDS | 35.0% | |
| TTTGGAAACTGATGAGTGTT+TGG | - | chr6.3:14839345-14839364 | MS.gene067102:CDS | 35.0% | |
| TTTGGTCATTGGAACATGTT+TGG | + | chr6.3:14841334-14841353 | None:intergenic | 35.0% | |
| ! | ATCAATGCAGGTGATCTTTT+AGG | + | chr6.3:14841275-14841294 | None:intergenic | 35.0% |
| ! | ATTGGTAGGACACTTTGAAA+TGG | + | chr6.3:14840316-14840335 | None:intergenic | 35.0% |
| ! | CACATATATTCTTCTGGAAG+TGG | + | chr6.3:14840646-14840665 | None:intergenic | 35.0% |
| ! | CTGATTCTTCTTGTGGATTT+TGG | - | chr6.3:14839327-14839346 | MS.gene067102:CDS | 35.0% |
| ! | GATCTTGTAGATTTTAGGCA+TGG | - | chr6.3:14842736-14842755 | MS.gene067102:CDS | 35.0% |
| ! | GGTCTGAATCAAGTTTTCTT+TGG | - | chr6.3:14839487-14839506 | MS.gene067102:CDS | 35.0% |
| ! | GTCTCTTCCTTTTTCTTTAG+AGG | + | chr6.3:14841113-14841132 | None:intergenic | 35.0% |
| ! | TCAAAGTGTCCTACCAATAA+CGG | - | chr6.3:14840318-14840337 | MS.gene067102:CDS | 35.0% |
| ! | TCAATGTATTGATGGCATGT+CGG | + | chr6.3:14841603-14841622 | None:intergenic | 35.0% |
| ! | TTCATTGCTGAATTGGTTCT+TGG | - | chr6.3:14842280-14842299 | MS.gene067102:intron | 35.0% |
| AAAAAACTTCTTCCTCCTCC+TGG | - | chr6.3:14838819-14838838 | MS.gene067102:CDS | 40.0% | |
| AAAATTCCTCTGCGTAGCAT+CGG | + | chr6.3:14842389-14842408 | None:intergenic | 40.0% | |
| AAAGGCTCCTTTATGCATGA+AGG | - | chr6.3:14842516-14842535 | MS.gene067102:intron | 40.0% | |
| AAATGTCACTAGGAGCAATG+AGG | - | chr6.3:14842303-14842322 | MS.gene067102:intron | 40.0% | |
| AAGAAGTGGGAATGTATGGT+TGG | - | chr6.3:14842574-14842593 | MS.gene067102:intron | 40.0% | |
| AAGAGTCCGAGAATTTCTTC+GGG | - | chr6.3:14840189-14840208 | MS.gene067102:CDS | 40.0% | |
| AAGATTGACAGAAAGCAAGC+TGG | - | chr6.3:14842237-14842256 | MS.gene067102:intron | 40.0% | |
| AATGGTAATCATCTCAGTCC+TGG | - | chr6.3:14841896-14841915 | MS.gene067102:intron | 40.0% | |
| AATGTCACTAGGAGCAATGA+GGG | - | chr6.3:14842304-14842323 | MS.gene067102:intron | 40.0% | |
| ACCAAATGGAGTTGGGAATT+AGG | + | chr6.3:14839444-14839463 | None:intergenic | 40.0% | |
| AGAAGAGCAGTAACTAGGTT+TGG | - | chr6.3:14840066-14840085 | MS.gene067102:CDS | 40.0% | |
| AGAGGTGAACTAAAGGTAGA+TGG | + | chr6.3:14841095-14841114 | None:intergenic | 40.0% | |
| AGCTTTCTTATAGATTGCGG+CGG | - | chr6.3:14839524-14839543 | MS.gene067102:CDS | 40.0% | |
| ATCAACCTAGCTACAAGACT+CGG | + | chr6.3:14839892-14839911 | None:intergenic | 40.0% | |
| ATCGAGACTACTGGAAGAAA+AGG | + | chr6.3:14841939-14841958 | None:intergenic | 40.0% | |
| ATCTCAGCCTTCATGCATAA+AGG | + | chr6.3:14842526-14842545 | None:intergenic | 40.0% | |
| ATGAAACACGGATACGGATA+TGG | - | chr6.3:14838903-14838922 | MS.gene067102:CDS | 40.0% | |
| ATGCAAGAAATGAGAAGCTG+TGG | + | chr6.3:14842340-14842359 | None:intergenic | 40.0% | |
| ATTAGATGAGACTAACCAGG+AGG | + | chr6.3:14838837-14838856 | None:intergenic | 40.0% | |
| ATTGCTAATGGGAACAGTCA+AGG | - | chr6.3:14839799-14839818 | MS.gene067102:intron | 40.0% | |
| CACTGATATGCGTAGAAACA+AGG | + | chr6.3:14841839-14841858 | None:intergenic | 40.0% | |
| CAGTGTGAGACAAATCATGT+TGG | - | chr6.3:14841854-14841873 | MS.gene067102:intron | 40.0% | |
| CCAGACATGCTTTCAATCTA+AGG | + | chr6.3:14841577-14841596 | None:intergenic | 40.0% | |
| CTCTTTCCCGAAGAAATTCT+CGG | + | chr6.3:14840198-14840217 | None:intergenic | 40.0% | |
| CTGATGCACAAGGAGAAAAA+AGG | - | chr6.3:14840979-14840998 | MS.gene067102:CDS | 40.0% | |
| GAAATTCTCGGACTCTTCAA+AGG | + | chr6.3:14840186-14840205 | None:intergenic | 40.0% | |
| GAAGAGTCCGAGAATTTCTT+CGG | - | chr6.3:14840188-14840207 | MS.gene067102:CDS | 40.0% | |
| GACTGTTTGAACTTGACCTA+TGG | - | chr6.3:14839667-14839686 | MS.gene067102:intron | 40.0% | |
| GAGATGATTACCATTGCAAG+AGG | + | chr6.3:14841891-14841910 | None:intergenic | 40.0% | |
| GAGCATACATGCAAAAACTG+CGG | - | chr6.3:14840426-14840445 | MS.gene067102:CDS | 40.0% | |
| GATGCCCTCATTAGATATTG+AGG | - | chr6.3:14839101-14839120 | MS.gene067102:CDS | 40.0% | |
| GCCATTGAACATTTGGTCAT+TGG | + | chr6.3:14841345-14841364 | None:intergenic | 40.0% | |
| GGTTTGAATCAAAGCCTAAG+TGG | - | chr6.3:14840876-14840895 | MS.gene067102:CDS | 40.0% | |
| GTCAGCACTTCAATTACCAT+TGG | - | chr6.3:14839571-14839590 | MS.gene067102:intron | 40.0% | |
| GTCTAGAGAAAATGAGGAGT+TGG | - | chr6.3:14841235-14841254 | MS.gene067102:CDS | 40.0% | |
| TAACGGCATTGTGACAGAAA+TGG | - | chr6.3:14840335-14840354 | MS.gene067102:CDS | 40.0% | |
| TAGTATCACACACTTGAGGT+TGG | - | chr6.3:14839068-14839087 | MS.gene067102:CDS | 40.0% | |
| TATCCGTATCCGTGTTTCAT+AGG | + | chr6.3:14838903-14838922 | None:intergenic | 40.0% | |
| TCACCTATGAAACACGGATA+CGG | - | chr6.3:14838897-14838916 | MS.gene067102:CDS | 40.0% | |
| TCCTGTGTTAAATGATGCTG+CGG | + | chr6.3:14842140-14842159 | None:intergenic | 40.0% | |
| TGAGTCACTCATTGGGAAAA+TGG | - | chr6.3:14842629-14842648 | MS.gene067102:CDS | 40.0% | |
| TGGTTCTTGGAAATGTCACT+AGG | - | chr6.3:14842293-14842312 | MS.gene067102:intron | 40.0% | |
| TGTTTAAGTCATGGTGTGCA+TGG | - | chr6.3:14842491-14842510 | MS.gene067102:intron | 40.0% | |
| TTATTCGGAACCTCTTGCAA+TGG | - | chr6.3:14841878-14841897 | MS.gene067102:intron | 40.0% | |
| TTCTGTCACAATGCCGTTAT+TGG | + | chr6.3:14840334-14840353 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCTAGTGTGAA+TGG | - | chr6.3:14838675-14838694 | MS.gene067102:CDS | 40.0% |
| ! | ATGCATGAAGGCTGAGATTT+TGG | - | chr6.3:14842528-14842547 | MS.gene067102:intron | 40.0% |
| ! | CCTTAGATTGAAAGCATGTC+TGG | - | chr6.3:14841574-14841593 | MS.gene067102:CDS | 40.0% |
| ! | GAAAATGAGGAGTTGGTTAC+TGG | - | chr6.3:14841242-14841261 | MS.gene067102:CDS | 40.0% |
| ! | GTGTTTTGTCACAAGTGAGA+AGG | - | chr6.3:14840112-14840131 | MS.gene067102:CDS | 40.0% |
| !! | AAGCTCAAGGTTGATAGAAG+CGG | - | chr6.3:14840227-14840246 | MS.gene067102:CDS | 40.0% |
| !! | ACTTGAGGTTGGTAGTGTAA+AGG | - | chr6.3:14839079-14839098 | MS.gene067102:CDS | 40.0% |
| !! | AGTCTTGTAGCTAGGTTGAT+GGG | - | chr6.3:14839892-14839911 | MS.gene067102:intron | 40.0% |
| !! | TTCTGATAGTGATGATGGTG+AGG | - | chr6.3:14839966-14839985 | MS.gene067102:intron | 40.0% |
| !!! | AGGAGGAGGAAGAAGTTTTT+TGG | + | chr6.3:14838820-14838839 | None:intergenic | 40.0% |
| AAAGCCTAAGTGGTCGAACT+CGG | - | chr6.3:14840886-14840905 | MS.gene067102:CDS | 45.0% | |
| AATGGCAAATGTCCCAAGGT+TGG | - | chr6.3:14841359-14841378 | MS.gene067102:CDS | 45.0% | |
| ACGAGAGAAGAGCAGTAACT+AGG | - | chr6.3:14840061-14840080 | MS.gene067102:intron | 45.0% | |
| ACTGTCCGATCACAATCCAA+TGG | + | chr6.3:14839590-14839609 | None:intergenic | 45.0% | |
| AGAAGCGGCTACTAAGATCT+TGG | - | chr6.3:14840242-14840261 | MS.gene067102:CDS | 45.0% | |
| AGAGTACATCTCGAAGCTCA+AGG | - | chr6.3:14840214-14840233 | MS.gene067102:CDS | 45.0% | |
| AGGAAACCTTCAAGCAGACA+AGG | - | chr6.3:14840954-14840973 | MS.gene067102:CDS | 45.0% | |
| ATGCACATGGAAACCAACCT+TGG | + | chr6.3:14841375-14841394 | None:intergenic | 45.0% | |
| CATGAGCTATGATCTTCTCC+TGG | + | chr6.3:14840581-14840600 | None:intergenic | 45.0% | |
| CATGGAGGCTTAAAGGATGA+TGG | - | chr6.3:14840696-14840715 | MS.gene067102:CDS | 45.0% | |
| CATGTTTCAACCGTTCAGGT+TGG | + | chr6.3:14842099-14842118 | None:intergenic | 45.0% | |
| CCTCAGATTTGACGTGTTCT+GGG | + | chr6.3:14839033-14839052 | None:intergenic | 45.0% | |
| CCTGAACGGTTGAAACATGA+AGG | - | chr6.3:14842100-14842119 | MS.gene067102:intron | 45.0% | |
| CCTTCATGTTTCAACCGTTC+AGG | + | chr6.3:14842103-14842122 | None:intergenic | 45.0% | |
| CTCAGATTTGACGTGTTCTG+GGG | + | chr6.3:14839032-14839051 | None:intergenic | 45.0% | |
| GATTCATCAAGCAAACCGCA+TGG | - | chr6.3:14840678-14840697 | MS.gene067102:CDS | 45.0% | |
| GCCTAATTCCCAACTCCATT+TGG | - | chr6.3:14839440-14839459 | MS.gene067102:intron | 45.0% | |
| GCTACTAAGATCTTGGAACC+TGG | - | chr6.3:14840249-14840268 | MS.gene067102:CDS | 45.0% | |
| GTCACAATGCCGTTATTGGT+AGG | + | chr6.3:14840330-14840349 | None:intergenic | 45.0% | |
| GTTCAATGGCAAATGTCCCA+AGG | - | chr6.3:14841355-14841374 | MS.gene067102:CDS | 45.0% | |
| GTTCTTACGACCAACCTGAA+CGG | - | chr6.3:14842086-14842105 | MS.gene067102:intron | 45.0% | |
| TCAGAACCTTGTCTGCTTGA+AGG | + | chr6.3:14840963-14840982 | None:intergenic | 45.0% | |
| TCATCCTTTAAGCCTCCATG+CGG | + | chr6.3:14840696-14840715 | None:intergenic | 45.0% | |
| TCCGCAGCATCATTTAACAC+AGG | - | chr6.3:14842136-14842155 | MS.gene067102:intron | 45.0% | |
| TCCTCAGATTTGACGTGTTC+TGG | + | chr6.3:14839034-14839053 | None:intergenic | 45.0% | |
| TCGGATAAGATCTCCTACGA+AGG | - | chr6.3:14840905-14840924 | MS.gene067102:CDS | 45.0% | |
| TCTTCCAGTAGTCTCGATGA+AGG | - | chr6.3:14841941-14841960 | MS.gene067102:intron | 45.0% | |
| TGACAGAAATGGCTGGAACT+CGG | - | chr6.3:14840346-14840365 | MS.gene067102:CDS | 45.0% | |
| TGCACATGGAAACCAACCTT+GGG | + | chr6.3:14841374-14841393 | None:intergenic | 45.0% | |
| TGGGAGATGAGTCACTCATT+GGG | - | chr6.3:14842622-14842641 | MS.gene067102:CDS | 45.0% | |
| TGTAGTTCTTCTCAGAAGCC+AGG | - | chr6.3:14840560-14840579 | MS.gene067102:CDS | 45.0% | |
| TTATCCGAGTTCGACCACTT+AGG | + | chr6.3:14840893-14840912 | None:intergenic | 45.0% | |
| TTGCATCTATCTGCCTTCGT+AGG | + | chr6.3:14840921-14840940 | None:intergenic | 45.0% | |
| TTGGGAGATGAGTCACTCAT+TGG | - | chr6.3:14842621-14842640 | MS.gene067102:CDS | 45.0% | |
| ! | AAGCTAGGTGGTGGTTGTAT+TGG | - | chr6.3:14838738-14838757 | MS.gene067102:CDS | 45.0% |
| ! | AGACAAGGTTCTGATGCACA+AGG | - | chr6.3:14840969-14840988 | MS.gene067102:CDS | 45.0% |
| ! | GAGTCTTGTAGCTAGGTTGA+TGG | - | chr6.3:14839891-14839910 | MS.gene067102:intron | 45.0% |
| !! | CAGCATCGGCGAAAAACAAA+AGG | - | chr6.3:14840511-14840530 | MS.gene067102:CDS | 45.0% |
| !! | TAAGCTATGAAGCACCGACA+CGG | + | chr6.3:14841700-14841719 | None:intergenic | 45.0% |
| !! | TGATGATGGTGAGGAGTCTT+TGG | - | chr6.3:14839975-14839994 | MS.gene067102:intron | 45.0% |
| !! | TTTGAGGCGGGTGTTGATAT+TGG | - | chr6.3:14842673-14842692 | MS.gene067102:CDS | 45.0% |
| !!! | GGCTGAGATTTTGGTTCAAG+AGG | - | chr6.3:14842537-14842556 | MS.gene067102:intron | 45.0% |
| AGATGAGACTAACCAGGAGG+AGG | + | chr6.3:14838834-14838853 | None:intergenic | 50.0% | |
| AGGTCAAAGCTGCGAATGCA+AGG | - | chr6.3:14839998-14840017 | MS.gene067102:intron | 50.0% | |
| AGTAGTCTCGATGAAGGCTC+AGG | - | chr6.3:14841947-14841966 | MS.gene067102:intron | 50.0% | |
| AGTCAAGGCCTCAGAAGCTT+CGG | - | chr6.3:14840025-14840044 | MS.gene067102:intron | 50.0% | |
| CAAACCGCATGGAGGCTTAA+AGG | - | chr6.3:14840689-14840708 | MS.gene067102:CDS | 50.0% | |
| CCCAGAACACGTCAAATCTG+AGG | - | chr6.3:14839030-14839049 | MS.gene067102:CDS | 50.0% | |
| CGAATGCAAGGCATGAGTCA+AGG | - | chr6.3:14840010-14840029 | MS.gene067102:intron | 50.0% | |
| CTGTTTGTAGCCTGCAAACC+AGG | + | chr6.3:14840270-14840289 | None:intergenic | 50.0% | |
| GAAGCTTCCAAGACTGATCC+AGG | + | chr6.3:14841917-14841936 | None:intergenic | 50.0% | |
| GCCTCAGAAGCTTCGGAAAA+CGG | - | chr6.3:14840032-14840051 | MS.gene067102:intron | 50.0% | |
| GGCATTGTGACAGAAATGGC+TGG | - | chr6.3:14840339-14840358 | MS.gene067102:CDS | 50.0% | |
| GTCAGCACATCAGAAGCCAT+AGG | + | chr6.3:14839686-14839705 | None:intergenic | 50.0% | |
| GTCATGGTGTGCATGGACAA+AGG | - | chr6.3:14842498-14842517 | MS.gene067102:intron | 50.0% | |
| GTGGGAATGTATGGTTGGCA+TGG | - | chr6.3:14842579-14842598 | MS.gene067102:intron | 50.0% | |
| TCAGAAGCTTCGGAAAACGG+AGG | - | chr6.3:14840035-14840054 | MS.gene067102:intron | 50.0% | |
| TCAGGGGTCGATGATGTCTT+TGG | + | chr6.3:14841166-14841185 | None:intergenic | 50.0% | |
| TCATCAAGCAAACCGCATGG+AGG | - | chr6.3:14840681-14840700 | MS.gene067102:CDS | 50.0% | |
| TCTCAGTCCTGGATCAGTCT+TGG | - | chr6.3:14841907-14841926 | MS.gene067102:intron | 50.0% | |
| TGAGCCTTCATCGAGACTAC+TGG | + | chr6.3:14841948-14841967 | None:intergenic | 50.0% | |
| ! | GATCTTGGAACCTGGTTTGC+AGG | - | chr6.3:14840257-14840276 | MS.gene067102:CDS | 50.0% |
| ! | GCAACTTCAAGCACTGTGAG+TGG | - | chr6.3:14840837-14840856 | MS.gene067102:CDS | 50.0% |
| ! | TCCGTTTTCCGAAGCTTCTG+AGG | + | chr6.3:14840036-14840055 | None:intergenic | 50.0% |
| ! | TGATGGTGAGGAGTCTTTGG+AGG | - | chr6.3:14839978-14839997 | MS.gene067102:intron | 50.0% |
| !! | AAGCACCGAGTCTTGTAGCT+AGG | - | chr6.3:14839884-14839903 | MS.gene067102:intron | 50.0% |
| !! | CACCGACTTCTCTTCAGCAT+CGG | - | chr6.3:14840497-14840516 | MS.gene067102:CDS | 50.0% |
| CCAGGGTGAAAACAAAGCCC+TGG | + | chr6.3:14842055-14842074 | None:intergenic | 55.0% | |
| CGCCGATGCTGAAGAGAAGT+CGG | + | chr6.3:14840502-14840521 | None:intergenic | 55.0% | |
| GTCACTAGGAGCAATGAGGG+AGG | - | chr6.3:14842307-14842326 | MS.gene067102:intron | 55.0% | |
| TTGCAACCGATGCTACGCAG+AGG | - | chr6.3:14842380-14842399 | MS.gene067102:intron | 55.0% | |
| ! | GACGTGATTGGTGTCCGTGT+CGG | - | chr6.3:14841683-14841702 | MS.gene067102:intron | 55.0% |
| ! | GTGCTGACCGTGTGAATACG+TGG | + | chr6.3:14839559-14839578 | None:intergenic | 55.0% |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | - | chr6.3:14838985-14839004 | MS.gene067102:CDS | 55.0% |
| !!! | CCAGGGCTTTGTTTTCACCC+TGG | - | chr6.3:14842052-14842071 | MS.gene067102:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 14838672 | 14842768 | 14838672 | ID=MS.gene067102 |
| chr6.3 | mRNA | 14838672 | 14842768 | 14838672 | ID=MS.gene067102.t1;Parent=MS.gene067102 |
| chr6.3 | exon | 14842600 | 14842768 | 14842600 | ID=MS.gene067102.t1.exon1;Parent=MS.gene067102.t1 |
| chr6.3 | CDS | 14842600 | 14842768 | 14842600 | ID=cds.MS.gene067102.t1;Parent=MS.gene067102.t1 |
| chr6.3 | exon | 14841979 | 14842049 | 14841979 | ID=MS.gene067102.t1.exon2;Parent=MS.gene067102.t1 |
| chr6.3 | CDS | 14841979 | 14842049 | 14841979 | ID=cds.MS.gene067102.t1;Parent=MS.gene067102.t1 |
| chr6.3 | exon | 14840064 | 14841641 | 14840064 | ID=MS.gene067102.t1.exon3;Parent=MS.gene067102.t1 |
| chr6.3 | CDS | 14840064 | 14841641 | 14840064 | ID=cds.MS.gene067102.t1;Parent=MS.gene067102.t1 |
| chr6.3 | exon | 14839472 | 14839583 | 14839472 | ID=MS.gene067102.t1.exon4;Parent=MS.gene067102.t1 |
| chr6.3 | CDS | 14839472 | 14839583 | 14839472 | ID=cds.MS.gene067102.t1;Parent=MS.gene067102.t1 |
| chr6.3 | exon | 14838672 | 14839384 | 14838672 | ID=MS.gene067102.t1.exon5;Parent=MS.gene067102.t1 |
| chr6.3 | CDS | 14838672 | 14839384 | 14838672 | ID=cds.MS.gene067102.t1;Parent=MS.gene067102.t1 |
| Gene Sequence |
| Protein sequence |
