AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054791

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054791.t1 MTR_5g047620 89.806 824 53 3 1 819 1 798 0.0 1433
MS.gene054791.t1 MTR_0020s0100 70.833 720 162 7 87 801 15 691 0.0 996
MS.gene054791.t1 MTR_1g114150 71.217 674 167 9 160 827 407 1059 0.0 962
MS.gene054791.t1 MTR_1g069565 69.913 688 184 8 159 827 207 890 0.0 952
MS.gene054791.t1 MTR_1g114130 68.889 675 187 7 159 827 390 1047 0.0 934
MS.gene054791.t1 MTR_1g069565 62.953 745 196 11 159 827 207 947 0.0 893
MS.gene054791.t1 MTR_5g065200 65.414 665 187 8 164 821 209 837 0.0 842
MS.gene054791.t1 MTR_1g114070 63.299 673 210 8 160 825 289 931 0.0 828
MS.gene054791.t1 MTR_1g114150 67.870 554 151 9 160 707 407 939 0.0 747
MS.gene054791.t1 MTR_2g024270 47.222 648 272 17 177 816 232 817 4.96e-171 515
MS.gene054791.t1 MTR_7g117445 42.582 728 330 20 170 816 204 924 2.23e-167 509
MS.gene054791.t1 MTR_7g117445 42.582 728 330 20 170 816 204 924 2.23e-167 509
MS.gene054791.t1 MTR_7g117445 42.582 728 330 20 170 816 204 924 3.48e-167 509
MS.gene054791.t1 MTR_4g132540 44.627 670 288 18 178 816 247 864 1.53e-166 505
MS.gene054791.t1 MTR_2g024140 44.296 675 285 19 156 816 88 685 1.95e-156 473
MS.gene054791.t1 MTR_7g117445 40.957 669 307 20 170 757 204 865 4.38e-141 439
MS.gene054791.t1 MTR_1g083120 34.940 664 356 17 179 816 278 891 1.73e-110 360
MS.gene054791.t1 MTR_1g083120 34.940 664 356 17 179 816 295 908 2.12e-110 360
MS.gene054791.t1 MTR_2g011630 35.320 671 381 18 178 808 45 702 1.10e-103 336
MS.gene054791.t1 MTR_2g011630 35.320 671 381 18 178 808 77 734 3.14e-103 336
MS.gene054791.t1 MTR_2g011630 35.320 671 381 18 178 808 289 946 1.49e-101 337
MS.gene054791.t1 MTR_2g024240 52.396 313 107 6 473 781 114 388 3.71e-96 306
MS.gene054791.t1 MTR_1g083120 34.432 607 322 17 179 759 278 834 9.87e-94 313
MS.gene054791.t1 MTR_1g083120 34.432 607 322 17 179 759 278 834 1.20e-93 313
MS.gene054791.t1 MTR_1g008060 40.564 461 233 11 166 617 938 1366 1.18e-86 302
MS.gene054791.t1 MTR_1g008060 61.765 170 58 2 641 807 1521 1686 3.70e-57 214
MS.gene054791.t1 MTR_4g091520 35.702 563 285 18 316 815 727 1275 1.28e-86 300
MS.gene054791.t1 MTR_4g091520 42.500 80 45 1 178 257 347 425 1.27e-13 75.5
MS.gene054791.t1 MTR_1g008060 40.564 461 233 11 166 617 929 1357 1.30e-86 302
MS.gene054791.t1 MTR_1g008060 61.765 170 58 2 641 807 1512 1677 3.59e-57 214
MS.gene054791.t1 MTR_8g062940 46.885 305 124 7 159 460 96 365 5.41e-72 241
MS.gene054791.t1 MTR_4g091520 32.359 479 247 18 316 731 692 1156 1.53e-51 196
MS.gene054791.t1 MTR_4g091520 42.500 80 45 1 178 257 347 425 1.34e-13 75.5
MS.gene054791.t1 MTR_4g091520 33.126 483 238 19 316 731 657 1121 1.56e-51 196
MS.gene054791.t1 MTR_4g091520 42.500 80 45 1 178 257 347 425 1.55e-13 75.5
MS.gene054791.t1 MTR_4g091520 32.359 479 247 18 316 731 727 1191 1.58e-51 196
MS.gene054791.t1 MTR_4g091520 42.500 80 45 1 178 257 347 425 1.40e-13 75.5
MS.gene054791.t1 MTR_8g013920 60.234 171 47 3 498 665 40 192 5.52e-49 172
MS.gene054791.t1 MTR_0295s0020 55.689 167 70 2 463 625 11 177 1.38e-48 170
MS.gene054791.t1 MTR_8g465700 53.409 176 73 5 410 581 7 177 1.88e-46 167
MS.gene054791.t1 MTR_8g465720 75.000 88 21 1 672 759 53 139 9.87e-41 147
MS.gene054791.t1 MTR_3g080750 67.188 64 21 0 580 643 85 148 3.03e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054791.t1 AT1G62310 48.183 633 277 15 177 800 288 878 0.0 550
MS.gene054791.t1 AT1G11950 46.368 647 292 15 177 817 272 869 6.03e-179 537
MS.gene054791.t1 AT1G11950 46.368 647 292 15 177 817 272 869 6.03e-179 537
MS.gene054791.t1 AT3G07610 51.908 524 208 10 306 824 415 899 6.23e-163 500
MS.gene054791.t1 AT3G07610 43.284 134 70 2 156 284 209 341 1.63e-24 110
MS.gene054791.t1 AT4G00990 43.140 707 327 19 162 815 144 828 6.71e-163 494
MS.gene054791.t1 AT3G07610 49.540 543 214 11 306 824 415 921 3.48e-154 478
MS.gene054791.t1 AT3G07610 43.284 134 70 2 156 284 209 341 1.88e-24 110
MS.gene054791.t1 AT1G11950 44.041 579 269 15 177 749 272 801 4.13e-142 440
MS.gene054791.t1 AT4G00990 42.009 657 306 19 162 765 144 778 6.11e-140 433
MS.gene054791.t1 AT4G00990 42.373 649 299 19 162 757 144 770 7.08e-139 430
MS.gene054791.t1 AT1G09060 32.165 656 375 20 179 816 287 890 1.17e-84 290
MS.gene054791.t1 AT1G09060 32.165 656 375 20 179 816 287 890 1.17e-84 290
MS.gene054791.t1 AT1G09060 32.165 656 375 20 179 816 301 904 1.95e-84 290
MS.gene054791.t1 AT1G09060 32.165 656 375 20 179 816 301 904 1.95e-84 290
MS.gene054791.t1 AT4G21430 31.390 669 386 21 178 827 309 923 1.03e-73 259
MS.gene054791.t1 AT3G07610 50.523 287 126 7 306 587 415 690 9.91e-73 254
MS.gene054791.t1 AT3G07610 43.284 134 70 2 156 284 209 341 3.74e-24 109

Find 168 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGACTTTACCTGCTTTAA+AGG 0.105810 5.3:+34711593 None:intergenic
TTCAAATATTCCTTCAATTT+AGG 0.182508 5.3:+34711653 None:intergenic
GCAGTAATGCCCACAGTTTC+CGG 0.211142 5.3:+34711926 None:intergenic
AAAGTGCATGATTTCTTTAC+TGG 0.224783 5.3:-34712757 MS.gene054791:CDS
GAATATTTGAAGAAGCATTT+TGG 0.224964 5.3:-34711641 MS.gene054791:CDS
ACCATGATCACCTTCATTAT+TGG 0.236171 5.3:+34713358 None:intergenic
CAGAGAAGAAGGAGGCTTTA+AGG 0.245987 5.3:-34714808 MS.gene054791:CDS
AGATCTAATTGTCTTAAATA+TGG 0.256445 5.3:+34714091 None:intergenic
TCACCTTCATTATTGGCTTT+TGG 0.260652 5.3:+34713365 None:intergenic
AGAACGTTGTTGACAATTAC+AGG 0.270674 5.3:+34713047 None:intergenic
CTTCGTCGTGGGGAGCTTCT+AGG 0.285523 5.3:-34713551 MS.gene054791:CDS
TGCCGCCCAGCCTGAGATTC+TGG 0.288771 5.3:-34713438 MS.gene054791:CDS
ATATTATCTTCCTTCTTAAC+AGG 0.299520 5.3:+34713203 None:intergenic
TCTGTGAAATAGTGATTTAC+TGG 0.328060 5.3:+34710432 None:intergenic
CCTTCAGATTTCTGACTTGA+TGG 0.328947 5.3:+34711190 None:intergenic
CATCAAGAAAATAGTTTAGA+TGG 0.330265 5.3:-34711710 MS.gene054791:CDS
AGGCAATTGATTGCTTAAAT+TGG 0.335529 5.3:-34712926 MS.gene054791:CDS
CTCGATATCTTCGAGATTAA+CGG 0.335966 5.3:+34713259 None:intergenic
AGTGATTTACTGGAAGTTTA+CGG 0.337301 5.3:+34710442 None:intergenic
CTATTTCACAGAGGACAAAT+TGG 0.360430 5.3:-34710421 MS.gene054791:CDS
ACCAACTCAGAAATGCAATT+TGG 0.365415 5.3:+34713308 None:intergenic
TTGATTAACTCAAACTCAAT+TGG 0.365985 5.3:+34713518 None:intergenic
AAGAGGCTTAAGGAGGAGTA+TGG 0.378678 5.3:-34711373 MS.gene054791:intron
CCTTTATTATTATCAGATAC+AGG 0.389998 5.3:+34714416 None:intergenic
TTCAATGGCACTGGAGAAAA+GGG 0.397011 5.3:-34713073 MS.gene054791:CDS
TTTCAATGGCACTGGAGAAA+AGG 0.401004 5.3:-34713074 MS.gene054791:CDS
TTCTTTACTGGGTACACAAA+TGG 0.410350 5.3:-34712745 MS.gene054791:CDS
AAGAAAATCGAGGTAGGAAA+AGG 0.412720 5.3:-34714607 MS.gene054791:CDS
CTAAAGATGAGTGTGCTTAC+TGG 0.415066 5.3:-34713746 MS.gene054791:intron
GTGCTCATCTGAAGCAATTA+CGG 0.419476 5.3:+34711796 None:intergenic
GGAGCTACATGGTGATAATC+AGG 0.421783 5.3:-34711861 MS.gene054791:CDS
ATAGTTTAGATGGTGCTCTC+TGG 0.426008 5.3:-34711700 MS.gene054791:CDS
ATTCGAAAGTGAATTGTCAT+TGG 0.434915 5.3:+34712953 None:intergenic
TATGGATTTCATCAGGAGCT+TGG 0.435966 5.3:-34712517 MS.gene054791:CDS
GCCAATAATGAAGGTGATCA+TGG 0.438610 5.3:-34713359 MS.gene054791:CDS
TAAGAGTAAAGTGGTGGAAA+AGG 0.439117 5.3:-34714642 MS.gene054791:CDS
AGGAGAAGAAGGAACCTAAT+GGG 0.439310 5.3:-34714451 MS.gene054791:CDS
CCTGTATCTGATAATAATAA+AGG 0.439314 5.3:-34714416 MS.gene054791:CDS
AATGAGTAATGCAGAGAAGA+AGG 0.439727 5.3:-34714819 MS.gene054791:CDS
TTTGACCGTTCCAGAATCTC+AGG 0.440046 5.3:+34713428 None:intergenic
GCTGGGAACCGATTGCCATT+TGG 0.440573 5.3:-34713001 MS.gene054791:CDS
ACAATTAGATCTTGAACAAA+TGG 0.443090 5.3:-34714080 MS.gene054791:CDS
ATTTCATCAGGAGCTTGGGC+GGG 0.443441 5.3:-34712512 MS.gene054791:CDS
CAATCATAAGAAGAGGCTTA+AGG 0.445426 5.3:-34711383 MS.gene054791:CDS
TTTGGCTTCTTTCTCCATCT+CGG 0.447987 5.3:+34714057 None:intergenic
GAAACTTGATTGCATGCATA+AGG 0.448780 5.3:-34714363 MS.gene054791:intron
GGGGAGCTTCTAGGTGGTAC+TGG 0.450026 5.3:-34713542 MS.gene054791:CDS
TTTCATCAGGAGCTTGGGCG+GGG 0.450305 5.3:-34712511 MS.gene054791:CDS
TAAAGATAAAAGTAGCATAT+TGG 0.450856 5.3:-34713770 MS.gene054791:CDS
AAGGAGAAGAAGGAACCTAA+TGG 0.451038 5.3:-34714452 MS.gene054791:CDS
ATGGATTTCATCAGGAGCTT+GGG 0.452334 5.3:-34712516 MS.gene054791:CDS
CTTCAGATTTCTGACTTGAT+GGG 0.454247 5.3:+34711191 None:intergenic
GACAAAATCAAGTGCAACCT+TGG 0.456526 5.3:+34710509 None:intergenic
TCATGTTGCTAAAGTGGAAC+CGG 0.459502 5.3:-34711945 MS.gene054791:CDS
ACCGTTCCAGAATCTCAGGC+TGG 0.460836 5.3:+34713432 None:intergenic
GCCAAATTGCATTTCTGAGT+TGG 0.462250 5.3:-34713309 MS.gene054791:CDS
CTGATGAAATGCACGCCAAA+TGG 0.462938 5.3:+34712986 None:intergenic
TAAGATAAAACGTCTGATCA+TGG 0.467077 5.3:+34711410 None:intergenic
TATTGCCTATGGATTTCATC+AGG 0.467912 5.3:-34712524 MS.gene054791:CDS
CAAGTACGTCTCGTTTAAGC+TGG 0.469121 5.3:-34713019 MS.gene054791:CDS
AAGGTATTCCAGCATATACT+TGG 0.480594 5.3:+34714117 None:intergenic
TTTCTCAGATCAGCAGAAGA+AGG 0.482830 5.3:+34714749 None:intergenic
GCTGTAAAAGAGGAGGAAAA+TGG 0.484521 5.3:-34714488 MS.gene054791:CDS
GCTTGATGTGGTAGAAAAGT+TGG 0.489208 5.3:-34709779 MS.gene054791:CDS
GTCGCAAGGATAAGCTTGAT+TGG 0.494914 5.3:-34712723 MS.gene054791:CDS
ACTTGATGGGGACAACCAGC+TGG 0.494968 5.3:+34711204 None:intergenic
GATTTCATCAGGAGCTTGGG+CGG 0.499730 5.3:-34712513 MS.gene054791:CDS
TTGTTTCAAGCCTGTTAAGA+AGG 0.500524 5.3:-34713213 MS.gene054791:CDS
TGATTGCTTAAATTGGTGCC+AGG 0.502959 5.3:-34712919 MS.gene054791:intron
TACGGATTTCCTCTGTCAAA+CGG 0.506035 5.3:+34710460 None:intergenic
TAGTTTAGATGGTGCTCTCT+GGG 0.506234 5.3:-34711699 MS.gene054791:CDS
CTATTGTTCTCCTTTAAAGC+AGG 0.506371 5.3:-34711603 MS.gene054791:intron
AGCTATTGAAATTGAATGAT+CGG 0.510634 5.3:-34712696 MS.gene054791:CDS
GTTGACTCATGTTGCTAAAG+TGG 0.514296 5.3:-34711951 MS.gene054791:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 5.3:+34711879 None:intergenic
TGAAGCTTCCAAGTATATGC+TGG 0.521299 5.3:-34714125 MS.gene054791:CDS
TAGTTCTGAAGCTGTAAAAG+AGG 0.524173 5.3:-34714498 MS.gene054791:CDS
TCTTGAACAAATGGCCGAGA+TGG 0.525971 5.3:-34714071 MS.gene054791:CDS
ATTGTCTTAAATATGGAAGA+AGG 0.525989 5.3:+34714098 None:intergenic
TTATGTAGATCAATAGCCTT+AGG 0.531000 5.3:+34713119 None:intergenic
TTTGTCTCTCCTGAAAATGT+TGG 0.534278 5.3:-34710492 MS.gene054791:CDS
AGAGGATGTACCTAAATTGA+AGG 0.534405 5.3:-34711663 MS.gene054791:CDS
GGTAGTCAAATATCGAGGTC+TGG 0.539728 5.3:+34713627 None:intergenic
GATCTGTAGGAATTGAGCCT+TGG 0.543618 5.3:-34711263 MS.gene054791:intron
ATAAAACGTCTGATCATGGA+TGG 0.544900 5.3:+34711414 None:intergenic
AACTCAGAAATGCAATTTGG+CGG 0.544926 5.3:+34713311 None:intergenic
AGAAGAAAGAAAATCGAGGT+AGG 0.546704 5.3:-34714613 MS.gene054791:CDS
AGAAGAAAGAAAATCGTGGT+AGG 0.547967 5.3:-34714538 MS.gene054791:CDS
GCACAATAGTGTTCGAGTCA+TGG 0.549629 5.3:-34711777 MS.gene054791:CDS
ATGGAGAGACCAATGTTGAC+AGG 0.554177 5.3:-34711838 MS.gene054791:CDS
CGAGTCATGGAAAATGAAAG+TGG 0.554587 5.3:-34711764 MS.gene054791:CDS
TGGATTATGTGATGCGAAGG+TGG 0.558113 5.3:-34711744 MS.gene054791:CDS
AATGCACGCCAAATGGCAAT+CGG 0.561501 5.3:+34712993 None:intergenic
CAATTCACTTTCGAATGTGA+AGG 0.569546 5.3:-34712946 MS.gene054791:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 5.3:-34711882 MS.gene054791:CDS
TTACTAACAATCATAAGAAG+AGG 0.571805 5.3:-34711390 MS.gene054791:CDS
GTAACATTCGTCTCAGCTCA+AGG 0.572483 5.3:+34713333 None:intergenic
GTTGCTATGAGCTTCGTCGT+GGG 0.576036 5.3:-34713562 MS.gene054791:CDS
CCGTTCCAGAATCTCAGGCT+GGG 0.577409 5.3:+34713433 None:intergenic
AAGTGCATGATTTCTTTACT+GGG 0.579389 5.3:-34712756 MS.gene054791:CDS
GATAATATACTGAATAACAC+AGG 0.580018 5.3:-34713188 MS.gene054791:CDS
TTCAGATTTCTGACTTGATG+GGG 0.580580 5.3:+34711192 None:intergenic
AGGTTAAGATCACCTTTGAA+AGG 0.581619 5.3:+34712592 None:intergenic
ATTATCAAGCCTGTCAACAT+TGG 0.582130 5.3:+34711829 None:intergenic
TGTCCAAAAGCCAATAATGA+AGG 0.583778 5.3:-34713368 MS.gene054791:CDS
GAGTGGCATGTAGGCAGTGA+TGG 0.586420 5.3:-34713401 MS.gene054791:CDS
CCGTTCAATTTACAGGTCTG+AGG 0.586479 5.3:-34709075 MS.gene054791:intron
AAATATACAGATCCTTTCAA+AGG 0.587719 5.3:-34712604 MS.gene054791:CDS
AAGAAGAAGAAAGAAAATCG+TGG 0.591308 5.3:-34714542 MS.gene054791:CDS
TTTCACAGAGGACAAATTGG+AGG 0.591359 5.3:-34710418 MS.gene054791:intron
CAAGACAAGAGGGAGCTACA+TGG 0.591607 5.3:-34711872 MS.gene054791:CDS
TCAAAATCTGAGTGGCATGT+AGG 0.592624 5.3:-34713410 MS.gene054791:CDS
CATGCAGATAATCTTGCCCT+CGG 0.592662 5.3:+34713495 None:intergenic
GAGAAAGAAGCCAAAATACA+AGG 0.593761 5.3:-34714049 MS.gene054791:intron
TAAAGTGGAACCGGAAACTG+TGG 0.595509 5.3:-34711936 MS.gene054791:CDS
TTCTGAAGCTGTAAAAGAGG+AGG 0.597856 5.3:-34714495 MS.gene054791:CDS
TAGAAAAGTTGGAGAATGCA+AGG 0.598312 5.3:-34709768 MS.gene054791:intron
TATCAAGCAGCTTCGCAGCA+AGG 0.599785 5.3:+34712572 None:intergenic
CGAGGGCAAGATTATCTGCA+TGG 0.602428 5.3:-34713494 MS.gene054791:CDS
TTGCTATGAGCTTCGTCGTG+GGG 0.607792 5.3:-34713561 MS.gene054791:CDS
GATGGAAACTGAAACAGCGC+AGG 0.608691 5.3:-34714699 MS.gene054791:CDS
TGTTGCTATGAGCTTCGTCG+TGG 0.611387 5.3:-34713563 MS.gene054791:CDS
TCATTCAATTTCAATAGCTG+AGG 0.611928 5.3:+34712700 None:intergenic
AGCTTCTGAACAAAACTCCA+AGG 0.613881 5.3:+34711246 None:intergenic
CCATCAAGTCAGAAATCTGA+AGG 0.618399 5.3:-34711190 MS.gene054791:intron
AGCACCTTGAGCAAGACAAG+AGG 0.618569 5.3:-34711883 MS.gene054791:CDS
AGGATATGAACTCGGTACAA+TGG 0.619500 5.3:+34712641 None:intergenic
AAGCTCCTGATGAAATCCAT+AGG 0.619697 5.3:+34712519 None:intergenic
GAGTAATGCAGAGAAGAAGG+AGG 0.621102 5.3:-34714816 MS.gene054791:CDS
TGTAAATAAGAGTAAAGTGG+TGG 0.623580 5.3:-34714648 MS.gene054791:CDS
GAAGCAATTACGGAAGAAGA+CGG 0.626484 5.3:+34711806 None:intergenic
TAAAACGTCTGATCATGGAT+GGG 0.626621 5.3:+34711415 None:intergenic
GAGTTTGAGTTAATCAACCG+AGG 0.628019 5.3:-34713512 MS.gene054791:CDS
AAGTACGTCTCGTTTAAGCT+GGG 0.631416 5.3:-34713018 MS.gene054791:CDS
TGGGTACACAAATGGTCGCA+AGG 0.631643 5.3:-34712737 MS.gene054791:CDS
TGCTGTAAATAAGAGTAAAG+TGG 0.634537 5.3:-34714651 MS.gene054791:CDS
TCATAAGAAGAGGCTTAAGG+AGG 0.634907 5.3:-34711380 MS.gene054791:CDS
CTACATGGTGATAATCAGGA+TGG 0.636072 5.3:-34711857 MS.gene054791:CDS
CTCTCACAGATTCATTACAA+AGG 0.638566 5.3:+34709041 None:intergenic
TGATCTACATAATCACGAGA+AGG 0.638587 5.3:-34713108 MS.gene054791:CDS
GTGAAGAAGAAAGAAAATCG+AGG 0.644136 5.3:-34714617 MS.gene054791:CDS
GTATCTGATAATAATAAAGG+AGG 0.644368 5.3:-34714413 MS.gene054791:CDS
GATTCATTACAAAGGAACAT+CGG 0.645420 5.3:+34709049 None:intergenic
TATACTGAATAACACAGGGA+AGG 0.649723 5.3:-34713183 MS.gene054791:CDS
AGTTTGAGTTAATCAACCGA+GGG 0.650492 5.3:-34713511 MS.gene054791:CDS
CCCAGCCTGAGATTCTGGAA+CGG 0.653382 5.3:-34713433 MS.gene054791:CDS
TTCCAGAATCTCAGGCTGGG+CGG 0.655812 5.3:+34713436 None:intergenic
CATAGCAACAGCGAAGACAA+AGG 0.659485 5.3:+34713576 None:intergenic
ATGAACTCGGTACAATGGCG+AGG 0.661487 5.3:+34712646 None:intergenic
CGTCGTGGGGAGCTTCTAGG+TGG 0.662823 5.3:-34713548 MS.gene054791:CDS
ACTGAATAACACAGGGAAGG+CGG 0.664052 5.3:-34713180 MS.gene054791:CDS
TGAGTGCTTCCGTTTGACAG+AGG 0.667021 5.3:-34710469 MS.gene054791:CDS
CGTTAATCTCGAAGATATCG+AGG 0.667337 5.3:-34713258 MS.gene054791:CDS
GTAAAAGAGGAGGAAAATGG+TGG 0.672369 5.3:-34714485 MS.gene054791:CDS
AAGTGGATTATGTGATGCGA+AGG 0.674316 5.3:-34711747 MS.gene054791:CDS
TGGCAAGGAGGATATGAACT+CGG 0.679134 5.3:+34712633 None:intergenic
TGTGTTGCAGTCATGCACCA+AGG 0.682853 5.3:-34710526 MS.gene054791:intron
TCAATGGCACTGGAGAAAAG+GGG 0.683003 5.3:-34713072 MS.gene054791:CDS
TATACATGCTATGCTTGATG+TGG 0.693903 5.3:-34709791 MS.gene054791:CDS
AAAGTGGAACCGGAAACTGT+GGG 0.697955 5.3:-34711935 MS.gene054791:CDS
GCTGCTTGATAATGTGCACG+TGG 0.707595 5.3:-34712560 MS.gene054791:CDS
TCTGTGGTAGTCAAATATCG+AGG 0.709923 5.3:+34713622 None:intergenic
ATAATATACTGAATAACACA+GGG 0.733267 5.3:-34713187 MS.gene054791:CDS
TGGAACGGTCAAAATCTGAG+TGG 0.746210 5.3:-34713418 MS.gene054791:CDS
AGTAAATCACTATTTCACAG+AGG 0.750431 5.3:-34710430 MS.gene054791:CDS
GCTGATCTGAGAAAGAAACG+TGG 0.761952 5.3:-34714740 MS.gene054791:CDS
CTGCTTGATAATGTGCACGT+GGG 0.762881 5.3:-34712559 MS.gene054791:CDS
CTACATCAGACATATCACAG+TGG 0.829336 5.3:+34712470 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATTTAGAAATTACA+AGG + chr5.3:34711066-34711085 None:intergenic 10.0%
!!! AAATTTTTCTCAAATAAATA+AGG + chr5.3:34711206-34711225 None:intergenic 10.0%
!!! TATATTTTTTAATTTGCTAT+TGG - chr5.3:34710045-34710064 MS.gene054791:intron 10.0%
!! AAACCTATTAAAATTAAGTA+AGG + chr5.3:34714222-34714241 None:intergenic 15.0%
!! AAGATAAAATTAACAAAATC+TGG - chr5.3:34714442-34714461 MS.gene054791:CDS 15.0%
!! AATTATCAAAGAAAAAAACA+CGG + chr5.3:34711883-34711902 None:intergenic 15.0%
!! ATTTGTAAAAAATTGTATGT+AGG + chr5.3:34713224-34713243 None:intergenic 15.0%
!! CAATAAATAAATTGTCTTTA+CGG - chr5.3:34711777-34711796 MS.gene054791:CDS 15.0%
!! GTAAAGACAATTTATTTATT+GGG + chr5.3:34711778-34711797 None:intergenic 15.0%
!!! AGAAGTAATTTTTTTTTGTA+GGG + chr5.3:34714251-34714270 None:intergenic 15.0%
!!! ATTTGTTTTATCTTTAATGA+AGG - chr5.3:34712727-34712746 MS.gene054791:CDS 15.0%
!!! TAGAAATTCCTAATTTTATA+GGG + chr5.3:34714191-34714210 None:intergenic 15.0%
!!! TAGAAGTAATTTTTTTTTGT+AGG + chr5.3:34714252-34714271 None:intergenic 15.0%
!!! TATTTTATTTTAGTTTCTCT+AGG - chr5.3:34714759-34714778 MS.gene054791:CDS 15.0%
!!! TGTTTTTTTCTTTGATAATT+TGG - chr5.3:34711883-34711902 MS.gene054791:CDS 15.0%
!!! TTAGAAATTCCTAATTTTAT+AGG + chr5.3:34714192-34714211 None:intergenic 15.0%
!!! TTCTTTGAAAAATCATTAAT+TGG - chr5.3:34713936-34713955 MS.gene054791:intron 15.0%
!! AAGTAATGACTAAACTTAAA+AGG - chr5.3:34714648-34714667 MS.gene054791:CDS 20.0%
!! AATAGTTAGTTATATGATGT+TGG + chr5.3:34712813-34712832 None:intergenic 20.0%
!! AATCAAACAAATTTGAATTG+AGG - chr5.3:34714568-34714587 MS.gene054791:CDS 20.0%
!! AGATCTAATTGTCTTAAATA+TGG + chr5.3:34709785-34709804 None:intergenic 20.0%
!! ATAATATACTGAATAACACA+GGG - chr5.3:34710686-34710705 MS.gene054791:intron 20.0%
!! ATGTTGAATTGTTAACAAAA+TGG + chr5.3:34712589-34712608 None:intergenic 20.0%
!! CGTAAAGACAATTTATTTAT+TGG + chr5.3:34711779-34711798 None:intergenic 20.0%
!! GGTAAAATAAGTTTAATTCA+AGG + chr5.3:34713770-34713789 None:intergenic 20.0%
!! TAAAGATAAAAGTAGCATAT+TGG - chr5.3:34710103-34710122 MS.gene054791:intron 20.0%
!! TCAATTACTGAAAATTTGAT+CGG - chr5.3:34713850-34713869 MS.gene054791:intron 20.0%
!! TTACATTACAATTACAAAAG+TGG + chr5.3:34713828-34713847 None:intergenic 20.0%
!! TTCAAATATTCCTTCAATTT+AGG + chr5.3:34712223-34712242 None:intergenic 20.0%
!!! AGTCCTTACTTAATTTTAAT+AGG - chr5.3:34714216-34714235 MS.gene054791:intron 20.0%
!!! GGATCTGTATATTTTTTATA+TGG + chr5.3:34711263-34711282 None:intergenic 20.0%
!!! GTTCTAATATCTTAGTATTT+TGG - chr5.3:34713087-34713106 MS.gene054791:CDS 20.0%
!!! TAATATCTTAGTATTTTGGT+TGG - chr5.3:34713091-34713110 MS.gene054791:CDS 20.0%
!!! TATAATTTTTGTACACTGTT+TGG - chr5.3:34712534-34712553 MS.gene054791:CDS 20.0%
!!! TATAGGGTTAAATATGTTTT+TGG - chr5.3:34714164-34714183 MS.gene054791:CDS 20.0%
!!! TGTATATTTTTTATATGGCA+AGG + chr5.3:34711258-34711277 None:intergenic 20.0%
!!! TTATTTTGTGTAATTTACCT+TGG - chr5.3:34711630-34711649 MS.gene054791:CDS 20.0%
!!! TTCATAGAAATTTTAGAATC+CGG - chr5.3:34713579-34713598 MS.gene054791:CDS 20.0%
!!! TTTTTCTCAAATAAATAAGG+AGG + chr5.3:34711203-34711222 None:intergenic 20.0%
! AAACAAATTTGAATTGAGGA+GGG - chr5.3:34714572-34714591 MS.gene054791:CDS 25.0%
! AAATATACAGATCCTTTCAA+AGG - chr5.3:34711269-34711288 MS.gene054791:intron 25.0%
! ACAATTAGATCTTGAACAAA+TGG - chr5.3:34709793-34709812 MS.gene054791:CDS 25.0%
! AGCTATTGAAATTGAATGAT+CGG - chr5.3:34711177-34711196 MS.gene054791:intron 25.0%
! ATATTATCTTCCTTCTTAAC+AGG + chr5.3:34710673-34710692 None:intergenic 25.0%
! ATTGTCTTAAATATGGAAGA+AGG + chr5.3:34709778-34709797 None:intergenic 25.0%
! CATCAAGAAAATAGTTTAGA+TGG - chr5.3:34712163-34712182 MS.gene054791:intron 25.0%
! CCTGTATCTGATAATAATAA+AGG - chr5.3:34709457-34709476 MS.gene054791:intron 25.0%
! CCTTTATTATTATCAGATAC+AGG + chr5.3:34709460-34709479 None:intergenic 25.0%
! GATAATATACTGAATAACAC+AGG - chr5.3:34710685-34710704 MS.gene054791:intron 25.0%
! GTATCTGATAATAATAAAGG+AGG - chr5.3:34709460-34709479 MS.gene054791:intron 25.0%
! TCACATTTCAAATCAAATAG+TGG + chr5.3:34709665-34709684 None:intergenic 25.0%
! TCATGTCAATAGATTCTTAT+TGG - chr5.3:34713997-34714016 MS.gene054791:intron 25.0%
! TTACTAACAATCATAAGAAG+AGG - chr5.3:34712483-34712502 MS.gene054791:CDS 25.0%
! TTCTCTTTATTAACCATAGA+AGG + chr5.3:34712763-34712782 None:intergenic 25.0%
! TTGATTAACTCAAACTCAAT+TGG + chr5.3:34710358-34710377 None:intergenic 25.0%
!! AAACAAACTTTGTTGTAACA+AGG + chr5.3:34714283-34714302 None:intergenic 25.0%
!! AAACTTTTTATACTGTCCTA+AGG - chr5.3:34710738-34710757 MS.gene054791:intron 25.0%
!! ACAGTATAAAAAGTTTTCAC+TGG + chr5.3:34710734-34710753 None:intergenic 25.0%
!! ACTTATACTTTAGCATGTTT+TGG - chr5.3:34710155-34710174 MS.gene054791:intron 25.0%
!! TCAAGGGTTAAATATGTTTT+CGG + chr5.3:34714690-34714709 None:intergenic 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG - chr5.3:34714663-34714682 MS.gene054791:CDS 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG - chr5.3:34710785-34710804 MS.gene054791:intron 25.0%
!!! ATATTTTTTATATGGCAAGG+AGG + chr5.3:34711255-34711274 None:intergenic 25.0%
!!! CAATTTTTTACAAATTACCC+TGG - chr5.3:34713229-34713248 MS.gene054791:CDS 25.0%
!!! CTTTGATAATTTGGCTTTTT+AGG - chr5.3:34711892-34711911 MS.gene054791:CDS 25.0%
!!! GAATATTTGAAGAAGCATTT+TGG - chr5.3:34712232-34712251 MS.gene054791:intron 25.0%
!!! TCATAGAAATTTTAGAATCC+GGG - chr5.3:34713580-34713599 MS.gene054791:CDS 25.0%
!!! TTTTTGGTCCCTATAAAATT+AGG - chr5.3:34714180-34714199 MS.gene054791:intron 25.0%
AAAGTGCATGATTTCTTTAC+TGG - chr5.3:34711116-34711135 MS.gene054791:intron 30.0%
AACAAAATGGTACAACTGTA+TGG + chr5.3:34712576-34712595 None:intergenic 30.0%
AACCCTATATTCAATAACCT+TGG + chr5.3:34714153-34714172 None:intergenic 30.0%
AAGAAGAAGAAAGAAAATCG+TGG - chr5.3:34709331-34709350 MS.gene054791:intron 30.0%
AAGTGAACATGGTATATTCA+AGG + chr5.3:34714707-34714726 None:intergenic 30.0%
AAGTGCATGATTTCTTTACT+GGG - chr5.3:34711117-34711136 MS.gene054791:intron 30.0%
ACAATTCAACATTGATCTGT+AGG - chr5.3:34712597-34712616 MS.gene054791:CDS 30.0%
ACCCTATATTCAATAACCTT+GGG + chr5.3:34714152-34714171 None:intergenic 30.0%
ACTGAAAATTTGATCGGAAT+GGG - chr5.3:34713856-34713875 MS.gene054791:intron 30.0%
AGGCAATTGATTGCTTAAAT+TGG - chr5.3:34710947-34710966 MS.gene054791:intron 30.0%
AGTAAATCACTATTTCACAG+AGG - chr5.3:34713443-34713462 MS.gene054791:CDS 30.0%
AGTGAACATGGTATATTCAA+GGG + chr5.3:34714706-34714725 None:intergenic 30.0%
AGTGATTTACTGGAAGTTTA+CGG + chr5.3:34713434-34713453 None:intergenic 30.0%
ATACTCAAGGTCATATCATT+TGG - chr5.3:34713006-34713025 MS.gene054791:CDS 30.0%
ATTAAGAAATCGAACTAACC+TGG + chr5.3:34710975-34710994 None:intergenic 30.0%
ATTCGAAAGTGAATTGTCAT+TGG + chr5.3:34710923-34710942 None:intergenic 30.0%
CAAACAAATTTGAATTGAGG+AGG - chr5.3:34714571-34714590 MS.gene054791:CDS 30.0%
CAGAAAGAAAAAAGTGAAGA+TGG - chr5.3:34709156-34709175 MS.gene054791:intron 30.0%
CCAAAAACATATATTGCCTA+TGG - chr5.3:34711338-34711357 MS.gene054791:intron 30.0%
CTATCAAAAATTTCTGCACT+CGG + chr5.3:34714605-34714624 None:intergenic 30.0%
CTATTGGAATGATCATTACA+GGG - chr5.3:34710061-34710080 MS.gene054791:intron 30.0%
GAAGGTAAAACTTATGTACA+TGG - chr5.3:34712701-34712720 MS.gene054791:CDS 30.0%
GAAGTGTAAAACTATTACGA+CGG + chr5.3:34712850-34712869 None:intergenic 30.0%
GAGAAAATGAAGGAAAATGT+TGG + chr5.3:34712334-34712353 None:intergenic 30.0%
GATAAAACTATGACTCTTGA+AGG + chr5.3:34709858-34709877 None:intergenic 30.0%
GGAATGATCAAATGGAAATA+TGG + chr5.3:34712872-34712891 None:intergenic 30.0%
GGTTAGTGATTTCATACTTA+AGG - chr5.3:34714126-34714145 MS.gene054791:CDS 30.0%
TAAGATAAAACGTCTGATCA+TGG + chr5.3:34712466-34712485 None:intergenic 30.0%
TACTGAAAATTTGATCGGAA+TGG - chr5.3:34713855-34713874 MS.gene054791:intron 30.0%
TAGAAATTACAAGGAACAGA+TGG + chr5.3:34711057-34711076 None:intergenic 30.0%
TATCAATTACCAAAACACCA+AGG + chr5.3:34711650-34711669 None:intergenic 30.0%
TATTTGCGTAGCATATTGAA+AGG - chr5.3:34711504-34711523 MS.gene054791:intron 30.0%
TCAAATCCATAAAAGTAGTC+TGG + chr5.3:34713485-34713504 None:intergenic 30.0%
TCATTCAATTTCAATAGCTG+AGG + chr5.3:34711176-34711195 None:intergenic 30.0%
TCTGTGAAATAGTGATTTAC+TGG + chr5.3:34713444-34713463 None:intergenic 30.0%
TGAATAACCTACATTACCAA+TGG + chr5.3:34712437-34712456 None:intergenic 30.0%
TGCTGTAAATAAGAGTAAAG+TGG - chr5.3:34709222-34709241 MS.gene054791:intron 30.0%
TGTAAATAAGAGTAAAGTGG+TGG - chr5.3:34709225-34709244 MS.gene054791:intron 30.0%
TTATGTAGATCAATAGCCTT+AGG + chr5.3:34710757-34710776 None:intergenic 30.0%
TTTCTTCTTCTTCTTCTCTT+TGG + chr5.3:34709323-34709342 None:intergenic 30.0%
! AACACTTCTATTGGTTGAAA+TGG - chr5.3:34713696-34713715 MS.gene054791:intron 30.0%
! ATTGGTAACTCAATGGATAT+AGG - chr5.3:34713060-34713079 MS.gene054791:CDS 30.0%
! CCATAGGCAATATATGTTTT+TGG + chr5.3:34711341-34711360 None:intergenic 30.0%
! GAGTGCAGAAATTTTTGATA+GGG - chr5.3:34714604-34714623 MS.gene054791:CDS 30.0%
! GGAAAAAACACCTTGTATTT+TGG + chr5.3:34709837-34709856 None:intergenic 30.0%
! GTTTTCGGTCCTATAAAATT+GGG + chr5.3:34714675-34714694 None:intergenic 30.0%
! TAATCATTTTCTTCACCTGT+TGG + chr5.3:34714064-34714083 None:intergenic 30.0%
! TGTTTTCGGTCCTATAAAAT+TGG + chr5.3:34714676-34714695 None:intergenic 30.0%
!! CAGTTTTGTGTATTTGAGTA+GGG + chr5.3:34712956-34712975 None:intergenic 30.0%
!! TTGACTGTTGATTTAATGCA+GGG - chr5.3:34711086-34711105 MS.gene054791:intron 30.0%
!! TTTCAACCAATAGAAGTGTT+TGG + chr5.3:34713696-34713715 None:intergenic 30.0%
!! TTTGACTGTTGATTTAATGC+AGG - chr5.3:34711085-34711104 MS.gene054791:intron 30.0%
!!! TGTAATTTACCTTGGTGTTT+TGG - chr5.3:34711638-34711657 MS.gene054791:CDS 30.0%
!!! TTTTCTGATTGCTGCTTTTT+TGG - chr5.3:34714035-34714054 MS.gene054791:intron 30.0%
AACATGACAGTGCCAATAAT+AGG + chr5.3:34713659-34713678 None:intergenic 35.0%
AACTCAGAAATGCAATTTGG+CGG + chr5.3:34710565-34710584 None:intergenic 35.0%
AAGAAAATCGAGGTAGGAAA+AGG - chr5.3:34709266-34709285 MS.gene054791:intron 35.0%
ACATAAAAGTGATGAGCTAG+TGG + chr5.3:34713262-34713281 None:intergenic 35.0%
ACATAATTAGTGAACCTACC+AGG + chr5.3:34712382-34712401 None:intergenic 35.0%
ACCAACTCAGAAATGCAATT+TGG + chr5.3:34710568-34710587 None:intergenic 35.0%
ACCATGATCACCTTCATTAT+TGG + chr5.3:34710518-34710537 None:intergenic 35.0%
ACGATTCCTTCAACTAAGTT+AGG + chr5.3:34713118-34713137 None:intergenic 35.0%
AGAACGTTGTTGACAATTAC+AGG + chr5.3:34710829-34710848 None:intergenic 35.0%
AGAAGAAAGAAAATCGAGGT+AGG - chr5.3:34709260-34709279 MS.gene054791:intron 35.0%
AGAAGAAAGAAAATCGTGGT+AGG - chr5.3:34709335-34709354 MS.gene054791:intron 35.0%
AGAGGATGTACCTAAATTGA+AGG - chr5.3:34712210-34712229 MS.gene054791:intron 35.0%
AGCTAGTGATAACTAAAACC+TGG - chr5.3:34712361-34712380 MS.gene054791:intron 35.0%
AGGTTAAGATCACCTTTGAA+AGG + chr5.3:34711284-34711303 None:intergenic 35.0%
AGTATCCAAAAAGAGTTGAC+AGG + chr5.3:34713161-34713180 None:intergenic 35.0%
AGTGATAACTAAAACCTGGT+AGG - chr5.3:34712365-34712384 MS.gene054791:intron 35.0%
ATAAAACGTCTGATCATGGA+TGG + chr5.3:34712462-34712481 None:intergenic 35.0%
ATATACCATGTTCACTTTGC+TGG - chr5.3:34714710-34714729 MS.gene054791:CDS 35.0%
ATTATCAAGCCTGTCAACAT+TGG + chr5.3:34712047-34712066 None:intergenic 35.0%
CAATCATAAGAAGAGGCTTA+AGG - chr5.3:34712490-34712509 MS.gene054791:CDS 35.0%
CAATTCACTTTCGAATGTGA+AGG - chr5.3:34710927-34710946 MS.gene054791:intron 35.0%
CATCTCATGCATGATCAAAT+AGG - chr5.3:34710000-34710019 MS.gene054791:intron 35.0%
CCAAATCCAAACACTTCTAT+TGG - chr5.3:34713687-34713706 MS.gene054791:intron 35.0%
CTATTTCACAGAGGACAAAT+TGG - chr5.3:34713452-34713471 MS.gene054791:CDS 35.0%
CTCGATATCTTCGAGATTAA+CGG + chr5.3:34710617-34710636 None:intergenic 35.0%
CTTGACCTACCAAAACAATT+GGG - chr5.3:34713603-34713622 MS.gene054791:CDS 35.0%
GAAACTTGATTGCATGCATA+AGG - chr5.3:34709510-34709529 MS.gene054791:intron 35.0%
GAGAAAGAAGCCAAAATACA+AGG - chr5.3:34709824-34709843 MS.gene054791:intron 35.0%
GCCCAAGGTTATTGAATATA+GGG - chr5.3:34714148-34714167 MS.gene054791:CDS 35.0%
GCTATTGGAATGATCATTAC+AGG - chr5.3:34710060-34710079 MS.gene054791:intron 35.0%
GCTGAGAAAAGAGAAAATGA+AGG + chr5.3:34712344-34712363 None:intergenic 35.0%
GGTAAAACTTATGTACATGG+TGG - chr5.3:34712704-34712723 MS.gene054791:CDS 35.0%
GTACACTACACACCTATTAT+TGG - chr5.3:34713644-34713663 MS.gene054791:intron 35.0%
GTGAAGAAGAAAGAAAATCG+AGG - chr5.3:34709256-34709275 MS.gene054791:intron 35.0%
TAAAACGTCTGATCATGGAT+GGG + chr5.3:34712461-34712480 None:intergenic 35.0%
TAGAAAAGTTGGAGAATGCA+AGG - chr5.3:34714105-34714124 MS.gene054791:CDS 35.0%
TATACATGCTATGCTTGATG+TGG - chr5.3:34714082-34714101 MS.gene054791:CDS 35.0%
TATACTGAATAACACAGGGA+AGG - chr5.3:34710690-34710709 MS.gene054791:intron 35.0%
TATTGCCTATGGATTTCATC+AGG - chr5.3:34711349-34711368 MS.gene054791:intron 35.0%
TCTGACTTTACCTGCTTTAA+AGG + chr5.3:34712283-34712302 None:intergenic 35.0%
TGATCTACATAATCACGAGA+AGG - chr5.3:34710765-34710784 MS.gene054791:intron 35.0%
TGTCCAAAAGCCAATAATGA+AGG - chr5.3:34710505-34710524 MS.gene054791:CDS 35.0%
TGTTTCAATTCTGTCTTTCC+TGG - chr5.3:34711428-34711447 MS.gene054791:intron 35.0%
TTCTTTACTGGGTACACAAA+TGG - chr5.3:34711128-34711147 MS.gene054791:intron 35.0%
TTGTTTCAAGCCTGTTAAGA+AGG - chr5.3:34710660-34710679 MS.gene054791:intron 35.0%
TTTGTCTCTCCTGAAAATGT+TGG - chr5.3:34713381-34713400 MS.gene054791:CDS 35.0%
! AAGGTATTCCAGCATATACT+TGG + chr5.3:34709759-34709778 None:intergenic 35.0%
! AGGTGTAAGTTTTCCTTCTA+TGG - chr5.3:34712747-34712766 MS.gene054791:CDS 35.0%
! AGTTTGAGTTAATCAACCGA+GGG - chr5.3:34710362-34710381 MS.gene054791:intron 35.0%
! CATTCTAGAAAATACAGTCC+AGG + chr5.3:34711449-34711468 None:intergenic 35.0%
! CGAGTGCAGAAATTTTTGAT+AGG - chr5.3:34714603-34714622 MS.gene054791:CDS 35.0%
! CTTCAGATTTCTGACTTGAT+GGG + chr5.3:34712685-34712704 None:intergenic 35.0%
! CTTGAGAATTGGTAACTCAA+TGG - chr5.3:34713053-34713072 MS.gene054791:CDS 35.0%
! GGCATTTTTCTTTTCCCATT+AGG + chr5.3:34709439-34709458 None:intergenic 35.0%
! TAAGACATTTTCAATGGCAC+TGG - chr5.3:34710791-34710810 MS.gene054791:intron 35.0%
! TAAGAGTAAAGTGGTGGAAA+AGG - chr5.3:34709231-34709250 MS.gene054791:intron 35.0%
! TTCAGATTTCTGACTTGATG+GGG + chr5.3:34712684-34712703 None:intergenic 35.0%
! TTGAAAGGTGCATAGTTTGA+AGG - chr5.3:34711519-34711538 MS.gene054791:intron 35.0%
! TTTTGTGAAGAAGGAGAAGA+AGG - chr5.3:34709411-34709430 MS.gene054791:intron 35.0%
!! CCAATAGAAGTGTTTGGATT+TGG + chr5.3:34713690-34713709 None:intergenic 35.0%
!! CTATTGTTCTCCTTTAAAGC+AGG - chr5.3:34712270-34712289 MS.gene054791:intron 35.0%
!! GCAGTTTTGTGTATTTGAGT+AGG + chr5.3:34712957-34712976 None:intergenic 35.0%
!! TAGTTCTGAAGCTGTAAAAG+AGG - chr5.3:34709375-34709394 MS.gene054791:intron 35.0%
!! TATGACCTTGAGTATTGATG+TGG + chr5.3:34713001-34713020 None:intergenic 35.0%
!! TTTGTACACTGTTTGGTTTG+TGG - chr5.3:34712541-34712560 MS.gene054791:CDS 35.0%
!!! AAATGGTGGTTTTGTGAAGA+AGG - chr5.3:34709402-34709421 MS.gene054791:intron 35.0%
!!! TCACCTTCATTATTGGCTTT+TGG + chr5.3:34710511-34710530 None:intergenic 35.0%
!!! TTTGCGACAATTTTTTGCAG+AGG - chr5.3:34714480-34714499 MS.gene054791:CDS 35.0%
AAGCTCCTGATGAAATCCAT+AGG + chr5.3:34711357-34711376 None:intergenic 40.0%
AAGGAGAAGAAGGAACCTAA+TGG - chr5.3:34709421-34709440 MS.gene054791:intron 40.0%
AAGTACGTCTCGTTTAAGCT+GGG - chr5.3:34710855-34710874 MS.gene054791:intron 40.0%
AGACCTGTAAATTGAACGGT+AGG + chr5.3:34714797-34714816 None:intergenic 40.0%
AGCTTCTGAACAAAACTCCA+AGG + chr5.3:34712630-34712649 None:intergenic 40.0%
AGGAGAAGAAGGAACCTAAT+GGG - chr5.3:34709422-34709441 MS.gene054791:intron 40.0%
AGGATATGAACTCGGTACAA+TGG + chr5.3:34711235-34711254 None:intergenic 40.0%
ATAGTTTAGATGGTGCTCTC+TGG - chr5.3:34712173-34712192 MS.gene054791:intron 40.0%
ATGGATTTCATCAGGAGCTT+GGG - chr5.3:34711357-34711376 MS.gene054791:intron 40.0%
CCAAAACAATTGGGCTTGAT+TGG - chr5.3:34713612-34713631 MS.gene054791:CDS 40.0%
CCATCAAGTCAGAAATCTGA+AGG - chr5.3:34712683-34712702 MS.gene054791:CDS 40.0%
CCTCAGACCTGTAAATTGAA+CGG + chr5.3:34714801-34714820 None:intergenic 40.0%
CGAGTCATGGAAAATGAAAG+TGG - chr5.3:34712109-34712128 MS.gene054791:intron 40.0%
CGTTAATCTCGAAGATATCG+AGG - chr5.3:34710615-34710634 MS.gene054791:intron 40.0%
CTAAAGATGAGTGTGCTTAC+TGG - chr5.3:34710127-34710146 MS.gene054791:intron 40.0%
CTACATCAGACATATCACAG+TGG + chr5.3:34711406-34711425 None:intergenic 40.0%
CTACATGGTGATAATCAGGA+TGG - chr5.3:34712016-34712035 MS.gene054791:intron 40.0%
CTCACATGGGAATGATCAAA+TGG + chr5.3:34712880-34712899 None:intergenic 40.0%
GAAGCAATTACGGAAGAAGA+CGG + chr5.3:34712070-34712089 None:intergenic 40.0%
GACAAAATCAAGTGCAACCT+TGG + chr5.3:34713367-34713386 None:intergenic 40.0%
GAGTTGAATGACGTATCCAT+TGG - chr5.3:34712418-34712437 MS.gene054791:intron 40.0%
GATTTCATACTTAAGGCCCA+AGG - chr5.3:34714133-34714152 MS.gene054791:CDS 40.0%
GCCAAATTGCATTTCTGAGT+TGG - chr5.3:34710564-34710583 MS.gene054791:intron 40.0%
GCCAATAATGAAGGTGATCA+TGG - chr5.3:34710514-34710533 MS.gene054791:CDS 40.0%
GCTGTAAAAGAGGAGGAAAA+TGG - chr5.3:34709385-34709404 MS.gene054791:intron 40.0%
GCTTGACCTACCAAAACAAT+TGG - chr5.3:34713602-34713621 MS.gene054791:CDS 40.0%
GCTTGATGTGGTAGAAAAGT+TGG - chr5.3:34714094-34714113 MS.gene054791:CDS 40.0%
GGCCCAAGGTTATTGAATAT+AGG - chr5.3:34714147-34714166 MS.gene054791:CDS 40.0%
GTAAAAGAGGAGGAAAATGG+TGG - chr5.3:34709388-34709407 MS.gene054791:intron 40.0%
GTTGGTCCTAACTTAGTTGA+AGG - chr5.3:34713109-34713128 MS.gene054791:CDS 40.0%
TAAGTGCATACGCTATCAAG+TGG - chr5.3:34711843-34711862 MS.gene054791:CDS 40.0%
TACGGATTTCCTCTGTCAAA+CGG + chr5.3:34713416-34713435 None:intergenic 40.0%
TAGTTTAGATGGTGCTCTCT+GGG - chr5.3:34712174-34712193 MS.gene054791:intron 40.0%
TATGGATTTCATCAGGAGCT+TGG - chr5.3:34711356-34711375 MS.gene054791:intron 40.0%
TCAAAATCTGAGTGGCATGT+AGG - chr5.3:34710463-34710482 MS.gene054791:CDS 40.0%
TCATAAGAAGAGGCTTAAGG+AGG - chr5.3:34712493-34712512 MS.gene054791:CDS 40.0%
TCATGTTGCTAAAGTGGAAC+CGG - chr5.3:34711928-34711947 MS.gene054791:CDS 40.0%
TCATTTGGACATCTAGATCG+CGG - chr5.3:34713021-34713040 MS.gene054791:CDS 40.0%
TCTAAATCCTTGACTCTGCA+AGG - chr5.3:34713791-34713810 MS.gene054791:CDS 40.0%
TCTGTGGTAGTCAAATATCG+AGG + chr5.3:34710254-34710273 None:intergenic 40.0%
TGAAGCTTCCAAGTATATGC+TGG - chr5.3:34709748-34709767 MS.gene054791:intron 40.0%
TGCAGAGTCAAGGATTTAGA+TGG + chr5.3:34713791-34713810 None:intergenic 40.0%
TTGATCATTCCCATGTGAGA+CGG - chr5.3:34712881-34712900 MS.gene054791:intron 40.0%
TTGCCTACCGTTCAATTTAC+AGG - chr5.3:34714791-34714810 MS.gene054791:CDS 40.0%
TTTCACAGAGGACAAATTGG+AGG - chr5.3:34713455-34713474 MS.gene054791:CDS 40.0%
TTTCTCAGATCAGCAGAAGA+AGG + chr5.3:34709127-34709146 None:intergenic 40.0%
TTTGACCAGCAAAGTGAACA+TGG + chr5.3:34714718-34714737 None:intergenic 40.0%
! AAGCACTCACCAACATTTTC+AGG + chr5.3:34713393-34713412 None:intergenic 40.0%
! AGCATTTTGCACAACTTCTG+TGG + chr5.3:34710270-34710289 None:intergenic 40.0%
! CCAATCAAGCCCAATTGTTT+TGG + chr5.3:34713615-34713634 None:intergenic 40.0%
! CCTTCAGATTTCTGACTTGA+TGG + chr5.3:34712686-34712705 None:intergenic 40.0%
! GAGTTCCTGTCAACTCTTTT+TGG - chr5.3:34713153-34713172 MS.gene054791:CDS 40.0%
! GAGTTTGAGTTAATCAACCG+AGG - chr5.3:34710361-34710380 MS.gene054791:intron 40.0%
! GTGCTCATCTGAAGCAATTA+CGG + chr5.3:34712080-34712099 None:intergenic 40.0%
! GTTGACTCATGTTGCTAAAG+TGG - chr5.3:34711922-34711941 MS.gene054791:CDS 40.0%
! TGATTGCTTAAATTGGTGCC+AGG - chr5.3:34710954-34710973 MS.gene054791:intron 40.0%
! TTCAATGGCACTGGAGAAAA+GGG - chr5.3:34710800-34710819 MS.gene054791:intron 40.0%
! TTTCAATGGCACTGGAGAAA+AGG - chr5.3:34710799-34710818 MS.gene054791:intron 40.0%
! TTTGGCTTCTTTCTCCATCT+CGG + chr5.3:34709819-34709838 None:intergenic 40.0%
!! AAGTGGATTATGTGATGCGA+AGG - chr5.3:34712126-34712145 MS.gene054791:intron 40.0%
!! GACGTATCCATTGGTAATGT+AGG - chr5.3:34712427-34712446 MS.gene054791:intron 40.0%
!! GGCTTGATTAGCTTGAGAAT+TGG - chr5.3:34713042-34713061 MS.gene054791:CDS 40.0%
!! GGTATGCCAGACTACTTTTA+TGG - chr5.3:34713476-34713495 MS.gene054791:CDS 40.0%
!! TTCTGAAGCTGTAAAAGAGG+AGG - chr5.3:34709378-34709397 MS.gene054791:intron 40.0%
!!! AGAAGCATTTTGGAGAGTTC+AGG - chr5.3:34712242-34712261 MS.gene054791:intron 40.0%
!!! CTGCTTTTTTGGTAACCAAC+AGG - chr5.3:34714046-34714065 MS.gene054791:intron 40.0%
!!! GATGCATGTGCTTTGTTTTG+TGG - chr5.3:34709594-34709613 MS.gene054791:intron 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - chr5.3:34712185-34712204 MS.gene054791:intron 40.0%
!!! TCAAGCCCAATTGTTTTGGT+AGG + chr5.3:34713611-34713630 None:intergenic 40.0%
!!! TGGAGTTTTGTTCAGAAGCT+AGG - chr5.3:34712630-34712649 MS.gene054791:CDS 40.0%
AAAAGGGATTCTCGTGAAGG+CGG - chr5.3:34712909-34712928 MS.gene054791:intron 45.0%
AAAGTGGAACCGGAAACTGT+GGG - chr5.3:34711938-34711957 MS.gene054791:CDS 45.0%
AAGAGGCTTAAGGAGGAGTA+TGG - chr5.3:34712500-34712519 MS.gene054791:CDS 45.0%
AATAGCACCTTGCAGAGTCA+AGG + chr5.3:34713801-34713820 None:intergenic 45.0%
AATGCACGCCAAATGGCAAT+CGG + chr5.3:34710883-34710902 None:intergenic 45.0%
ACTGAATAACACAGGGAAGG+CGG - chr5.3:34710693-34710712 MS.gene054791:intron 45.0%
AGCAGTCATTTGAGTAGCTC+AGG + chr5.3:34710998-34711017 None:intergenic 45.0%
ATGGAGAGACCAATGTTGAC+AGG - chr5.3:34712035-34712054 MS.gene054791:intron 45.0%
ATGTGAGACGGTTGGGAAAA+GGG - chr5.3:34712893-34712912 MS.gene054791:intron 45.0%
CAAGTACGTCTCGTTTAAGC+TGG - chr5.3:34710854-34710873 MS.gene054791:intron 45.0%
CAGAGAAGAAGGAGGCTTTA+AGG - chr5.3:34709065-34709084 MS.gene054791:intron 45.0%
CATAGCAACAGCGAAGACAA+AGG + chr5.3:34710300-34710319 None:intergenic 45.0%
CATGCAGATAATCTTGCCCT+CGG + chr5.3:34710381-34710400 None:intergenic 45.0%
CCGTTCAATTTACAGGTCTG+AGG - chr5.3:34714798-34714817 MS.gene054791:CDS 45.0%
CTGATGAAATGCACGCCAAA+TGG + chr5.3:34710890-34710909 None:intergenic 45.0%
GAGCTAGTGGTAAATAGCCA+GGG + chr5.3:34713249-34713268 None:intergenic 45.0%
GAGTAATGCAGAGAAGAAGG+AGG - chr5.3:34709057-34709076 MS.gene054791:CDS 45.0%
GATCTGTAGGAATTGAGCCT+TGG - chr5.3:34712610-34712629 MS.gene054791:CDS 45.0%
GCACAATAGTGTTCGAGTCA+TGG - chr5.3:34712096-34712115 MS.gene054791:intron 45.0%
GCAGGCATCTCTCACTTATA+AGG + chr5.3:34712979-34712998 None:intergenic 45.0%
GCTGATCTGAGAAAGAAACG+TGG - chr5.3:34709133-34709152 MS.gene054791:intron 45.0%
GGAGCTACATGGTGATAATC+AGG - chr5.3:34712012-34712031 MS.gene054791:intron 45.0%
GGTAGTCAAATATCGAGGTC+TGG + chr5.3:34710249-34710268 None:intergenic 45.0%
GTAACATTCGTCTCAGCTCA+AGG + chr5.3:34710543-34710562 None:intergenic 45.0%
GTCGCAAGGATAAGCTTGAT+TGG - chr5.3:34711150-34711169 MS.gene054791:intron 45.0%
TAAAGTGGAACCGGAAACTG+TGG - chr5.3:34711937-34711956 MS.gene054791:CDS 45.0%
TCTTGAACAAATGGCCGAGA+TGG - chr5.3:34709802-34709821 MS.gene054791:CDS 45.0%
TGAGCTAGTGGTAAATAGCC+AGG + chr5.3:34713250-34713269 None:intergenic 45.0%
TGGAACGGTCAAAATCTGAG+TGG - chr5.3:34710455-34710474 MS.gene054791:CDS 45.0%
TGGATTATGTGATGCGAAGG+TGG - chr5.3:34712129-34712148 MS.gene054791:intron 45.0%
TGGCAAGGAGGATATGAACT+CGG + chr5.3:34711243-34711262 None:intergenic 45.0%
TTTGACCGTTCCAGAATCTC+AGG + chr5.3:34710448-34710467 None:intergenic 45.0%
! TCAATGGCACTGGAGAAAAG+GGG - chr5.3:34710801-34710820 MS.gene054791:intron 45.0%
! TTTTCCCAACCGTCTCACAT+GGG + chr5.3:34712893-34712912 None:intergenic 45.0%
!! ACCTTGAGTATTGATGTGGC+AGG + chr5.3:34712997-34713016 None:intergenic 45.0%
!! CTGCTTGATAATGTGCACGT+GGG - chr5.3:34711314-34711333 MS.gene054791:intron 45.0%
!! CTGGGATATTTTTCGGAGAG+AGG - chr5.3:34712192-34712211 MS.gene054791:intron 45.0%
!! TGACTCTGCAAGGTGCTATT+TGG - chr5.3:34713801-34713820 MS.gene054791:intron 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG - chr5.3:34712654-34712673 MS.gene054791:CDS 45.0%
!!! TTGTTTTGGTAGGTCAAGCC+CGG + chr5.3:34713601-34713620 None:intergenic 45.0%
!!! TAAATATGAATTTTTTATAA+CGG - chr5.3:34714410-34714429 MS.gene054791:CDS 5.0%
AAAGGGATTCTCGTGAAGGC+GGG - chr5.3:34712910-34712929 MS.gene054791:intron 50.0%
AGCACCTTGAGCAAGACAAG+AGG - chr5.3:34711990-34712009 MS.gene054791:intron 50.0%
ATGAACTCGGTACAATGGCG+AGG + chr5.3:34711230-34711249 None:intergenic 50.0%
ATTTCATCAGGAGCTTGGGC+GGG - chr5.3:34711361-34711380 MS.gene054791:intron 50.0%
CAAGACAAGAGGGAGCTACA+TGG - chr5.3:34712001-34712020 MS.gene054791:intron 50.0%
CATGTGAGACGGTTGGGAAA+AGG - chr5.3:34712892-34712911 MS.gene054791:intron 50.0%
CATTCCCATGTGAGACGGTT+GGG - chr5.3:34712886-34712905 MS.gene054791:intron 50.0%
CGAGGGCAAGATTATCTGCA+TGG - chr5.3:34710379-34710398 MS.gene054791:intron 50.0%
GATGAGTGTGCTTACTGGTC+AGG - chr5.3:34710132-34710151 MS.gene054791:intron 50.0%
GATGGAAACTGAAACAGCGC+AGG - chr5.3:34709174-34709193 MS.gene054791:intron 50.0%
GATTTCATCAGGAGCTTGGG+CGG - chr5.3:34711360-34711379 MS.gene054791:intron 50.0%
GCACCTTGAGCAAGACAAGA+GGG - chr5.3:34711991-34712010 MS.gene054791:intron 50.0%
GCAGTAATGCCCACAGTTTC+CGG + chr5.3:34711950-34711969 None:intergenic 50.0%
GCCTGCCACATCAATACTCA+AGG - chr5.3:34712993-34713012 MS.gene054791:CDS 50.0%
GGGAAAAGGGATTCTCGTGA+AGG - chr5.3:34712906-34712925 MS.gene054791:intron 50.0%
GTTGCTATGAGCTTCGTCGT+GGG - chr5.3:34710311-34710330 MS.gene054791:intron 50.0%
TATCAAGCAGCTTCGCAGCA+AGG + chr5.3:34711304-34711323 None:intergenic 50.0%
TCATTCCCATGTGAGACGGT+TGG - chr5.3:34712885-34712904 MS.gene054791:intron 50.0%
TGAGTGCTTCCGTTTGACAG+AGG - chr5.3:34713404-34713423 MS.gene054791:CDS 50.0%
TGGGTACACAAATGGTCGCA+AGG - chr5.3:34711136-34711155 MS.gene054791:intron 50.0%
TGTTGCTATGAGCTTCGTCG+TGG - chr5.3:34710310-34710329 MS.gene054791:intron 50.0%
TTGCTATGAGCTTCGTCGTG+GGG - chr5.3:34710312-34710331 MS.gene054791:intron 50.0%
! CTTTTCCCAACCGTCTCACA+TGG + chr5.3:34712894-34712913 None:intergenic 50.0%
!! GCTGCTTGATAATGTGCACG+TGG - chr5.3:34711313-34711332 MS.gene054791:intron 50.0%
AAGGGATTCTCGTGAAGGCG+GGG - chr5.3:34712911-34712930 MS.gene054791:intron 55.0%
ACCGTTCCAGAATCTCAGGC+TGG + chr5.3:34710444-34710463 None:intergenic 55.0%
ACTTGATGGGGACAACCAGC+TGG + chr5.3:34712672-34712691 None:intergenic 55.0%
CCGTTCCAGAATCTCAGGCT+GGG + chr5.3:34710443-34710462 None:intergenic 55.0%
GAGTGGCATGTAGGCAGTGA+TGG - chr5.3:34710472-34710491 MS.gene054791:CDS 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG + chr5.3:34711997-34712016 None:intergenic 55.0%
GCTGGGAACCGATTGCCATT+TGG - chr5.3:34710872-34710891 MS.gene054791:intron 55.0%
TTCCAGAATCTCAGGCTGGG+CGG + chr5.3:34710440-34710459 None:intergenic 55.0%
TTTCATCAGGAGCTTGGGCG+GGG - chr5.3:34711362-34711381 MS.gene054791:intron 55.0%
! CCCAGCCTGAGATTCTGGAA+CGG - chr5.3:34710440-34710459 MS.gene054791:CDS 55.0%
! GAAGGCGGGGGTGTAGAATT+TGG - chr5.3:34712924-34712943 MS.gene054791:CDS 55.0%
AGGGATTCTCGTGAAGGCGG+GGG - chr5.3:34712912-34712931 MS.gene054791:intron 60.0%
CTTCGTCGTGGGGAGCTTCT+AGG - chr5.3:34710322-34710341 MS.gene054791:intron 60.0%
GGGGAGCTTCTAGGTGGTAC+TGG - chr5.3:34710331-34710350 MS.gene054791:intron 60.0%
CGTCGTGGGGAGCTTCTAGG+TGG - chr5.3:34710325-34710344 MS.gene054791:intron 65.0%
TGCCGCCCAGCCTGAGATTC+TGG - chr5.3:34710435-34710454 MS.gene054791:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 34709055 34714840 34709055 ID=MS.gene054791
chr5.3 mRNA 34709055 34714840 34709055 ID=MS.gene054791.t1;Parent=MS.gene054791
chr5.3 exon 34714364 34714840 34714364 ID=MS.gene054791.t1.exon1;Parent=MS.gene054791.t1
chr5.3 CDS 34714364 34714840 34714364 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34714050 34714188 34714050 ID=MS.gene054791.t1.exon2;Parent=MS.gene054791.t1
chr5.3 CDS 34714050 34714188 34714050 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34713747 34713813 34713747 ID=MS.gene054791.t1.exon3;Parent=MS.gene054791.t1
chr5.3 CDS 34713747 34713813 34713747 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34712920 34713658 34712920 ID=MS.gene054791.t1.exon4;Parent=MS.gene054791.t1
chr5.3 CDS 34712920 34713658 34712920 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34712471 34712788 34712471 ID=MS.gene054791.t1.exon5;Parent=MS.gene054791.t1
chr5.3 CDS 34712471 34712788 34712471 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34711604 34711981 34711604 ID=MS.gene054791.t1.exon6;Parent=MS.gene054791.t1
chr5.3 CDS 34711604 34711981 34711604 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34711374 34711446 34711374 ID=MS.gene054791.t1.exon7;Parent=MS.gene054791.t1
chr5.3 CDS 34711374 34711446 34711374 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34711191 34711276 34711191 ID=MS.gene054791.t1.exon8;Parent=MS.gene054791.t1
chr5.3 CDS 34711191 34711276 34711191 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34710419 34710538 34710419 ID=MS.gene054791.t1.exon9;Parent=MS.gene054791.t1
chr5.3 CDS 34710419 34710538 34710419 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34709769 34709827 34709769 ID=MS.gene054791.t1.exon10;Parent=MS.gene054791.t1
chr5.3 CDS 34709769 34709827 34709769 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
chr5.3 exon 34709055 34709082 34709055 ID=MS.gene054791.t1.exon11;Parent=MS.gene054791.t1
chr5.3 CDS 34709055 34709082 34709055 ID=cds.MS.gene054791.t1;Parent=MS.gene054791.t1
Gene Sequence

>MS.gene054791

ATGAGTAATGCAGAGAAGAAGGAGGCTTTAAGGAGAATGTTAGAGAATGATGAAGAAACTGATAAAGATCCTTCTTCTGCTGATCTGAGAAAGAAACGTGGCAGAAAGAAAAAAGTGAAGATGGAAACTGAAACAGCGCAGGAATGTTCTTCTTTTTTTGTTGCTGTTGCTGTAAATAAGAGTAAAGTGGTGGAAAAGGTTGTGAAGAAGAAAGAAAATCGAGGTAGGAAAAGGAAGACAACAATTTCTGATGAAAATAATGCTGCCAAAGAGAAGAAGAAGAAGAAAGAAAATCGTGGTAGGAAGAGAAAGATAATGTTTAGTTCTGAAGCTGTAAAAGAGGAGGAAAATGGTGGTTTTGTGAAGAAGGAGAAGAAGGAACCTAATGGGAAAAGAAAAATGCCTGTATCTGATAATAATAAAGGAGGTTATGCTTTAAGAAGTGCTGAAAAAATGAAACTTGATTGCATGCATAAGGTAACATCACATTACATGATATCTTTGATCTTTGTAGTTATTGCTATATGCATGTTTTTGTTGATGCATGTGCTTTGTTTTGTGGTAATTGCAATTACAAAGCTAGTTTGCATTCATGTGATCAACTAATCCACTATTTGATTTGAAATGTGATTCATCATTTTATTCACTACAGCAGACTAAGAACAAGAAAGAAAGTAACAATGATCATGACATTGAAGCTTCCAAGTATATGCTGGAATACCTTCTTCCATATTTAAGACAATTAGATCTTGAACAAATGGCCGAGATGGAGAAAGAAGCCAAAATACAAGGTGTTTTTTCCTTCAAGAGTCATAGTTTTATCTTATTAATGTCATTTGCTTTGCACATGATTCATAGCTTTGATACTACTACATAATTTATATTCTGCTATGCACTATTTTTATTGTATGTTCTTTTAGATTATTATGTGTTAAGTTTGTATTTCATCTCATGCATGATCAAATAGGAGATCATTCTTAGTTTCATATATATATTTTTTAATTTGCTATTGGAATGATCATTACAGGGCTCTCATCACTCTCTGAGCTAAAGATAAAAGTAGCATATTGGTCTAAAGATGAGTGTGCTTACTGGTCAGGACTTATACTTTAGCATGTTTTGGTTTAGTTATAATTATAATGCTATATTGTTGTTGTTGCTGACTTAAAAAACTTTTTGTAGTGACAACTGCCAGACCTCGATATTTGACTACCACAGAAGTTGTGCAAAATGCTCTTTTGACCTTTGTCTTCGCTGTTGCTATGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTACTGGTCCAATTGAGTTTGAGTTAATCAACCGAGGGCAAGATTATCTGCATGGTGAGATAATAATCAGAGAAAATGAATCTCATGCTGCCGCCCAGCCTGAGATTCTGGAACGGTCAAAATCTGAGTGGCATGTAGGCAGTGATGGTAACATTTGCTGTCCAAAAGCCAATAATGAAGGTGATCATGGTTTCCTTGAGCTGAGACGAATGTTACCGCCAAATTGCATTTCTGAGTTGGTATGTAAAGCAAAACAATTTAAAGAAGCCGTTAATCTCGAAGATATCGAGGAGACTCTTGATAATGTTTGCTCTTGTTTCAAGCCTGTTAAGAAGGAAGATAATATACTGAATAACACAGGGAAGGCGGCTTTTTGTGAAGATTCCAGTGAAAACTTTTTATACTGTCCTAAGGCTATTGATCTACATAATCACGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAACAACGTTCTTGAATCAAGTACGTCTCGTTTAAGCTGGGAACCGATTGCCATTTGGCGTGCATTTCATCAGATAAGTGATACCAATGACAATTCACTTTCGAATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGTTAGTTCGATTTCTTAATCCTGAGCTACTCAAATGACTGCTTAGTTTAACTAATTTGTTCTACTATACTTGTCATGTCCATCTGTTCCTTGTAATTTCTAAATTTTTATTTGACTGTTGATTTAATGCAGGGAGATATTAAAGTGCATGATTTCTTTACTGGGTACACAAATGGTCGCAAGGATAAGCTTGATTGGCCTCAGCTATTGAAATTGAATGATCGGCCTCCTTATTTATTTGAGAAAAATTTGCCTCGCCATTGTACCGAGTTCATATCCTCCTTGCCATATAAAAAATATACAGATCCTTTCAAAGGTGATCTTAACCTTGCTGCGAAGCTGCTTGATAATGTGCACGTGGGACCAAAAACATATATTGCCTATGGATTTCATCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCACTGTGATATGTCTGATGTAGTATGTTTCAATTCTGTCTTTCCTGGACTGTATTTTCTAGAATGTCTTACGAATGTTTCAATACTTATATTGTTATTTTTATTTGCGTAGCATATTGAAAGGTGCATAGTTTGAAGGATGTATACTGATAGTTATGAAGTTTGACGTACATGTCTTGATAATTTGCTTATTGATGTCTTTGAAAACACTCATTTGATTTTATGTTTTATTTTGTGTAATTTACCTTGGTGTTTTGGTAATTGATAATGATAATTTGAAGAAAAATACTCTTTTATGATAAGTTGTATCATTAGATAGTCTTGAAGTATGAATGATGACTTTCGATTAGAAAGTTGTAATCAATGTAAACTCCCAATAAATAAATTGTCTTTACGGATTAGTTCTTTGTCTGTGCTTTATATTTTTTGCTTTGTGTCTCTAAGTGCATACGCTATCAAGTGGAGAATGAAATGTTGCCGTGTTTTTTTCTTTGATAATTTGGCTTTTTAGGTAAATGTGTTGACTCATGTTGCTAAAGTGGAACCGGAAACTGTGGGCATTACTGCAATTAAGAAATTAACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCAGGATGGAGAGACCAATGTTGACAGGCTTGATAATCCGTCTTCTTCCGTAATTGCTTCAGATGAGCACAATAGTGTTCGAGTCATGGAAAATGAAAGTGGATTATGTGATGCGAAGGTGGTTGATTCAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAAGGAATATTTGAAGAAGCATTTTGGAGAGTTCAGGCATATCTATTGTTCTCCTTTAAAGCAGGTAAAGTCAGATATGCGAATAAGAGATCTCAATTATCTGCCAACATTTTCCTTCATTTTCTCTTTTCTCAGCTAGTGATAACTAAAACCTGGTAGGTTCACTAATTATGTATGCGTGCATTTTCTTGAGTTGAATGACGTATCCATTGGTAATGTAGGTTATTCATCCCATCCATGATCAGACGTTTTATCTTACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGTTAGTAGTGTTTATAATTTTTGTACACTGTTTGGTTTGTGGAGTGTTGATCCATACAGTTGTACCATTTTGTTAACAATTCAACATTGATCTGTAGGAATTGAGCCTTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCATCAAGTCAGAAATCTGAAGGTAAAACTTATGTACATGGTGGATTTGTTTTATCTTTAATGAAGGTGTAAGTTTTCCTTCTATGGTTAATAAAGAGAATTAATATAACTGATCATGACTTGAGAACCAACATCATATAACTAACTATTATGAAAGTTTGAGACCGTCGTAATAGTTTTACACTTCCATATTTCCATTTGATCATTCCCATGTGAGACGGTTGGGAAAAGGGATTCTCGTGAAGGCGGGGGTGTAGAATTTGGATTGATCCCTACTCAAATACACAAAACTGCCTTATAAGTGAGAGATGCCTGCCACATCAATACTCAAGGTCATATCATTTGGACATCTAGATCGCGGCTTGATTAGCTTGAGAATTGGTAACTCAATGGATATAGGATCAGTTCTAATATCTTAGTATTTTGGTTGGTCCTAACTTAGTTGAAGGAATCGTTTAAGTTAATGATTTGAGTTCCTGTCAACTCTTTTTGGATACTGCATTTTTTTTTTTTTACAATAACAGCATGAAGATTTGAACCTACATACAATTTTTTACAAATTACCCTGGCTATTTACCACTAGCTCATCACTTTTATGTCTCGATAGCTATTCTTTCTAGCTAATGCTTGAAAAGTTTGTATGAATGTCAATGATATGCATTGTTGTGTTGCAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTCCGTTTGACAGAGGAAATCCGTAAACTTCCAGTAAATCACTATTTCACAGAGGACAAATTGGAGGTATGCCAGACTACTTTTATGGATTTGATTCTGACGAGTATACTCTTATCAATTAATTTGAGATATTGCATCTTTTATTCTCTACTTTAATGTGATTATAGCTTCATAGAAATTTTAGAATCCGGGCTTGACCTACCAAAACAATTGGGCTTGATTGGAAGCTGTCAGTACACTACACACCTATTATTGGCACTGTCATGTTGCATTTGTCCAAATCCAAACACTTCTATTGGTTGAAATGGTTCAAGCATATTATTCATTGAAAATGTTCAAGCATATTATTCATATTTCCTTGAATTAAACTTATTTTACCATCTAAATCCTTGACTCTGCAAGGTGCTATTTGGTCCACTTTTGTAATTGTAATGTAACGTCAATTACTGAAAATTTGATCGGAATGGGAAAAATTAAAAATGCTTCTGCATATTTAGTAGACAATTTATACTTTTAACTGAATGTTTCTTTGAAAAATCATTAATTGGTTTTATATTTATATTTTTCTATCAAGTGTTCATTCATGTCATGTCAATAGATTCTTATTGGTATTTTGTGTACTGTTTTTCTGATTGCTGCTTTTTTGGTAACCAACAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAAAGTTGGAGAATGCAAGGTTAGTGATTTCATACTTAAGGCCCAAGGTTATTGAATATAGGGTTAAATATGTTTTTGGTCCCTATAAAATTAGGAATTTCTAAGTTTAGTCCTTACTTAATTTTAATAGGTTTTTTAGTCCCTACAAAAAAAAATTACTTCTAATTTTAGTCCTTGTTACAACAAAGTTTGTTTAATTATTCTTAAACTTTTAAATTTTTGTACGATTTTTTTGAGACAAGTTTAGAATACTATAAAAAGTTCATTAACTAAAATTTAGAATTTTTTAACATGAAACGAATTAAATATGAATTTTTTATAACGGCAAAAGTTAAAGATAAAATTAACAAAATCTGGACGTAGAAATCAAATTTTGCGACAATTTTTTGCAGAGGAACTTTTAGTAATGTTCTTAACACGTCTGTAAAAAATTGTTCAAAAACTCAAGATTTTAAGCATAAATCAAACAAATTTGAATTGAGGAGGGACTAATACCGAGTGCAGAAATTTTTGATAGGGACTAAAAAAACTATTAAAATTAAGTAATGACTAAACTTAAAAGGTCCCAATTTTATAGGACCGAAAACATATTTAACCCTTGAATATACCATGTTCACTTTGCTGGTCAAATGCATTGACAATCATATATTGTATTTTATTTTAGTTTCTCTAGGCTCACGATTTTGCCTACCGTTCAATTTACAGGTCTGAGGAAACCGATGTTCCTTTGTAA
Protein sequence

>MS.gene054791.t1

MSNAEKKEALRRMLENDEETDKDPSSADLRKKRGRKKKVKMETETAQECSSFFVAVAVNKSKVVEKVVKKKENRGRKRKTTISDENNAAKEKKKKKENRGRKRKIMFSSEAVKEEENGGFVKKEKKEPNGKRKMPVSDNNKGGYALRSAEKMKLDCMHKQTKNKKESNNDHDIEASKYMLEYLLPYLRQLDLEQMAEMEKEAKIQGLSSLSELKIKVAYWSKDECAYCDNCQTSIFDYHRSCAKCSFDLCLRCCYELRRGELLGGTGPIEFELINRGQDYLHGEIIIRENESHAAAQPEILERSKSEWHVGSDGNICCPKANNEGDHGFLELRRMLPPNCISELVCKAKQFKEAVNLEDIEETLDNVCSCFKPVKKEDNILNNTGKAAFCEDSSENFLYCPKAIDLHNHEKDLRHFQWHWRKGEPVIVNNVLESSTSRLSWEPIAIWRAFHQISDTNDNSLSNVKAIDCLNWCQGDIKVHDFFTGYTNGRKDKLDWPQLLKLNDRPPYLFEKNLPRHCTEFISSLPYKKYTDPFKGDLNLAAKLLDNVHVGPKTYIAYGFHQELGRGDSVTKLHCDMSDVVNVLTHVAKVEPETVGITAIKKLTQKHLEQDKRELHGDNQDGETNVDRLDNPSSSVIASDEHNSVRVMENESGLCDAKVVDSVHQENSLDGALWDIFRREDVPKLKEYLKKHFGEFRHIYCSPLKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEIRKLPVNHYFTEDKLEVKKMIIHAMLDVVEKLENARSEETDVPL