Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051664.t1 | XP_024632987.1 | 97 | 668 | 15 | 2 | 1 | 668 | 1 | 663 | 0.00E+00 | 1183.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051664.t1 | Q38914 | 56.0 | 452 | 123 | 15 | 81 | 503 | 62 | 466 | 8.2e-112 | 406.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051664.t1 | A0A072VEY0 | 96.6 | 668 | 15 | 3 | 1 | 668 | 1 | 660 | 0.0e+00 | 1171.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051664.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene051664 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene050901 | MS.gene051664 | 0.814109 | 1.82E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene051664 | 0.836606 | 8.48E-57 | -1.69E-46 |
| MS.gene051279 | MS.gene051664 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene051664 | 0.815726 | 7.98E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene051719 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene051720 | 0.847733 | 9.59E-60 | -1.69E-46 |
| MS.gene051664 | MS.gene053122 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene053226 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene053536 | 0.814472 | 1.51E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene053538 | 0.816912 | 4.33E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene054142 | 0.807801 | 4.23E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene055465 | 0.822888 | 1.86E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene055466 | 0.821766 | 3.39E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene055537 | 0.842319 | 2.78E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene056169 | 0.803104 | 4.09E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene057082 | 0.816987 | 4.16E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene05894 | 0.828839 | 7.19E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene059424 | 0.803777 | 2.97E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene059625 | 0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene060519 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene061335 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene06133 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene061866 | 0.823466 | 1.36E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene061869 | 0.838888 | 2.20E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene061872 | 0.83153 | 1.58E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene061874 | 0.83343 | 5.36E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene06258 | 0.833137 | 6.34E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene062650 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene062732 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene062743 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene063478 | 0.809301 | 2.02E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene064520 | 0.81176 | 5.96E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene064521 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene064522 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene065674 | 0.824179 | 9.28E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene066010 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene066076 | 0.805907 | 1.06E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene066080 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene067101 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene067102 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene067485 | 0.804955 | 1.69E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene069852 | 0.853855 | 1.81E-61 | -1.69E-46 |
| MS.gene051664 | MS.gene069884 | 0.821999 | 3.00E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene070242 | 0.806971 | 6.35E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene070339 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene070885 | 0.804376 | 2.23E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene071247 | 0.805333 | 1.40E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene072493 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene07374 | 0.829577 | 4.76E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene074519 | 0.822577 | 2.20E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene074520 | 0.816743 | 4.73E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene07723 | 0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene09873 | 0.836797 | 7.58E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene20920 | 0.83725 | 5.81E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene21127 | 0.841769 | 3.89E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene21960 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene22309 | 0.80617 | 9.37E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene23112 | 0.813684 | 2.26E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene23837 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene23880 | 0.840192 | 1.01E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene23882 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene24507 | 0.907601 | 4.25E-81 | -1.69E-46 |
| MS.gene051664 | MS.gene24527 | 0.813107 | 3.03E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene24736 | 0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene26380 | 0.822218 | 2.67E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene26465 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene26659 | 0.828195 | 1.03E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene26851 | 0.800122 | 1.67E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene26916 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene27646 | -0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene30198 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene30946 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene31139 | 0.805704 | 1.17E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene31336 | 0.8029 | 4.50E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene31433 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene32854 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene35375 | 0.80724 | 5.57E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene36265 | 0.841387 | 4.90E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene36334 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene37460 | 0.828303 | 9.69E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene39518 | 0.817129 | 3.87E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene40409 | 0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene41651 | 0.842459 | 2.55E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene42310 | 0.801856 | 7.39E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene43171 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene44340 | 0.828588 | 8.27E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene44341 | 0.823157 | 1.61E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene44437 | 0.838038 | 3.65E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene45217 | 0.82217 | 2.73E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene45425 | 0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene45937 | 0.823278 | 1.51E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene49378 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene49423 | 0.800854 | 1.19E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene49426 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene50538 | 0.826096 | 3.27E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene50564 | 0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene51589 | 0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene52996 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene55101 | 0.836351 | 9.85E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene55218 | 0.815273 | 1.01E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene55425 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene56169 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene56606 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene57665 | 0.822293 | 2.56E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene59294 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene59295 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene60174 | 0.832748 | 7.92E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene62491 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene63434 | 0.810808 | 9.59E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene66156 | 0.833595 | 4.87E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene66409 | 0.807501 | 4.90E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene66496 | 0.912351 | 2.15E-83 | -1.69E-46 |
| MS.gene051664 | MS.gene68611 | 0.803168 | 3.97E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene69459 | 0.825351 | 4.92E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene69993 | 0.812381 | 4.36E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene70955 | 0.83166 | 1.47E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene71774 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene71807 | 0.810667 | 1.03E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene72487 | 0.820446 | 6.83E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene73327 | 0.811445 | 6.98E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene73577 | 0.827302 | 1.69E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene74354 | 0.800113 | 1.68E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene75205 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene75670 | 0.820238 | 7.62E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene76227 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene76314 | 0.812287 | 4.57E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene76518 | 0.850918 | 1.24E-60 | -1.69E-46 |
| MS.gene051664 | MS.gene76549 | 0.815252 | 1.02E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene77531 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene051664 | MS.gene78530 | 0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene78578 | 0.822105 | 2.83E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene78652 | 0.81779 | 2.75E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene80724 | 0.824711 | 6.96E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene82546 | 0.83778 | 4.25E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene83227 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene84426 | 0.844756 | 6.21E-59 | -1.69E-46 |
| MS.gene051664 | MS.gene85133 | 0.851132 | 1.08E-60 | -1.69E-46 |
| MS.gene051664 | MS.gene85164 | 0.847845 | 8.94E-60 | -1.69E-46 |
| MS.gene051664 | MS.gene85553 | 0.840827 | 6.88E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene88304 | 0.810855 | 9.37E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene88680 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene90370 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene90674 | 0.845407 | 4.14E-59 | -1.69E-46 |
| MS.gene051664 | MS.gene92982 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene94920 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene96315 | 0.850078 | 2.14E-60 | -1.69E-46 |
| MS.gene051664 | MS.gene97017 | 0.81034 | 1.21E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene99949 | 0.814914 | 1.21E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051664.t1 | MTR_1g017400 | 97.455 | 668 | 9 | 3 | 1 | 668 | 1 | 660 | 0.0 | 1350 |
| MS.gene051664.t1 | MTR_3g103460 | 61.080 | 704 | 190 | 28 | 1 | 667 | 1 | 657 | 0.0 | 723 |
| MS.gene051664.t1 | MTR_4g097520 | 49.435 | 708 | 265 | 22 | 1 | 668 | 1 | 655 | 1.17e-172 | 508 |
| MS.gene051664.t1 | MTR_8g020510 | 43.576 | 576 | 205 | 19 | 18 | 556 | 3 | 495 | 4.88e-127 | 388 |
| MS.gene051664.t1 | MTR_5g015070 | 55.670 | 388 | 108 | 8 | 283 | 668 | 219 | 544 | 5.95e-123 | 376 |
| MS.gene051664.t1 | MTR_4g127930 | 63.333 | 270 | 87 | 2 | 261 | 518 | 91 | 360 | 1.36e-115 | 356 |
| MS.gene051664.t1 | MTR_4g065370 | 65.517 | 261 | 69 | 4 | 258 | 515 | 122 | 364 | 1.04e-112 | 350 |
| MS.gene051664.t1 | MTR_2g098180 | 65.019 | 263 | 64 | 5 | 258 | 515 | 129 | 368 | 9.04e-111 | 344 |
| MS.gene051664.t1 | MTR_7g080460 | 79.208 | 202 | 42 | 0 | 308 | 509 | 250 | 451 | 9.67e-111 | 349 |
| MS.gene051664.t1 | MTR_8g068510 | 63.713 | 237 | 79 | 4 | 280 | 513 | 91 | 323 | 1.06e-98 | 308 |
| MS.gene051664.t1 | MTR_5g031880 | 42.688 | 506 | 189 | 13 | 16 | 516 | 10 | 419 | 2.28e-98 | 311 |
| MS.gene051664.t1 | MTR_4g130270 | 70.414 | 169 | 50 | 0 | 316 | 484 | 46 | 214 | 5.33e-82 | 263 |
| MS.gene051664.t1 | MTR_7g009410 | 63.441 | 186 | 64 | 2 | 299 | 484 | 48 | 229 | 6.53e-76 | 249 |
| MS.gene051664.t1 | MTR_2g460730 | 61.881 | 202 | 64 | 3 | 284 | 484 | 22 | 211 | 9.18e-73 | 239 |
| MS.gene051664.t1 | MTR_8g044070 | 58.373 | 209 | 75 | 4 | 284 | 484 | 15 | 219 | 1.10e-71 | 238 |
| MS.gene051664.t1 | MTR_6g011490 | 55.607 | 214 | 83 | 2 | 280 | 484 | 15 | 225 | 1.28e-70 | 234 |
| MS.gene051664.t1 | MTR_4g007770 | 68.639 | 169 | 50 | 1 | 316 | 484 | 35 | 200 | 3.59e-70 | 231 |
| MS.gene051664.t1 | MTR_8g468920 | 57.009 | 214 | 75 | 3 | 285 | 484 | 23 | 233 | 1.29e-68 | 229 |
| MS.gene051664.t1 | MTR_8g044040 | 55.660 | 212 | 75 | 2 | 316 | 527 | 55 | 247 | 1.80e-67 | 226 |
| MS.gene051664.t1 | MTR_4g094868 | 54.167 | 168 | 66 | 3 | 320 | 487 | 176 | 332 | 1.53e-43 | 164 |
| MS.gene051664.t1 | MTR_4g094868 | 54.167 | 168 | 66 | 3 | 320 | 487 | 176 | 332 | 1.59e-43 | 164 |
| MS.gene051664.t1 | MTR_5g016810 | 54.167 | 168 | 66 | 3 | 320 | 487 | 152 | 308 | 6.09e-43 | 162 |
| MS.gene051664.t1 | MTR_7g100590 | 48.421 | 190 | 87 | 3 | 298 | 487 | 117 | 295 | 3.74e-42 | 159 |
| MS.gene051664.t1 | MTR_2g093060 | 43.966 | 232 | 99 | 7 | 274 | 487 | 72 | 290 | 5.30e-42 | 159 |
| MS.gene051664.t1 | MTR_2g093060 | 43.966 | 232 | 99 | 7 | 274 | 487 | 72 | 290 | 6.31e-42 | 159 |
| MS.gene051664.t1 | MTR_4g061200 | 47.619 | 189 | 88 | 3 | 299 | 487 | 110 | 287 | 1.51e-41 | 156 |
| MS.gene051664.t1 | MTR_5g016810 | 52.874 | 174 | 65 | 4 | 320 | 487 | 152 | 314 | 4.69e-41 | 157 |
| MS.gene051664.t1 | MTR_4g061200 | 47.619 | 189 | 88 | 3 | 299 | 487 | 110 | 287 | 1.02e-40 | 155 |
| MS.gene051664.t1 | MTR_7g091390 | 62.308 | 130 | 41 | 2 | 315 | 444 | 55 | 176 | 1.85e-38 | 147 |
| MS.gene051664.t1 | MTR_4g094868 | 55.474 | 137 | 60 | 1 | 351 | 487 | 41 | 176 | 6.63e-36 | 139 |
| MS.gene051664.t1 | MTR_2g093060 | 41.379 | 232 | 90 | 8 | 274 | 487 | 72 | 275 | 8.86e-34 | 135 |
| MS.gene051664.t1 | MTR_4g061200 | 43.915 | 189 | 80 | 4 | 299 | 487 | 110 | 272 | 2.40e-33 | 132 |
| MS.gene051664.t1 | MTR_4g061200 | 43.915 | 189 | 80 | 4 | 299 | 487 | 110 | 272 | 1.27e-32 | 131 |
| MS.gene051664.t1 | MTR_7g061190 | 50.000 | 136 | 67 | 1 | 352 | 487 | 3 | 137 | 2.64e-30 | 117 |
| MS.gene051664.t1 | MTR_7g091390 | 62.637 | 91 | 29 | 1 | 354 | 444 | 3 | 88 | 2.43e-22 | 99.0 |
| MS.gene051664.t1 | MTR_1g049140 | 41.667 | 144 | 73 | 3 | 296 | 439 | 113 | 245 | 5.09e-21 | 93.6 |
| MS.gene051664.t1 | MTR_1g049140 | 41.667 | 144 | 73 | 3 | 296 | 439 | 113 | 245 | 8.58e-21 | 95.5 |
| MS.gene051664.t1 | MTR_1g049140 | 41.667 | 144 | 73 | 3 | 296 | 439 | 113 | 245 | 2.71e-20 | 93.2 |
| MS.gene051664.t1 | MTR_3g090510 | 44.340 | 106 | 58 | 1 | 358 | 463 | 163 | 267 | 1.51e-16 | 82.8 |
| MS.gene051664.t1 | MTR_7g060560 | 42.453 | 106 | 59 | 2 | 358 | 463 | 156 | 259 | 1.21e-13 | 73.6 |
| MS.gene051664.t1 | MTR_1g028560 | 49.315 | 73 | 36 | 1 | 407 | 479 | 99 | 170 | 3.52e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051664.t1 | AT4G37750 | 53.019 | 530 | 149 | 20 | 12 | 507 | 7 | 470 | 3.44e-149 | 444 |
| MS.gene051664.t1 | AT1G72570 | 70.161 | 248 | 72 | 2 | 261 | 507 | 164 | 410 | 1.28e-120 | 366 |
| MS.gene051664.t1 | AT1G51190 | 67.300 | 263 | 78 | 5 | 258 | 515 | 129 | 388 | 9.75e-115 | 356 |
| MS.gene051664.t1 | AT5G57390 | 65.833 | 240 | 82 | 0 | 300 | 539 | 65 | 304 | 1.08e-113 | 349 |
| MS.gene051664.t1 | AT5G57390 | 65.833 | 240 | 82 | 0 | 300 | 539 | 183 | 422 | 9.74e-113 | 350 |
| MS.gene051664.t1 | AT3G20840 | 64.259 | 263 | 84 | 3 | 258 | 517 | 126 | 381 | 1.16e-111 | 348 |
| MS.gene051664.t1 | AT5G17430 | 66.535 | 254 | 71 | 2 | 308 | 561 | 136 | 375 | 2.62e-111 | 345 |
| MS.gene051664.t1 | AT5G17430 | 66.535 | 254 | 71 | 2 | 308 | 561 | 198 | 437 | 4.64e-111 | 347 |
| MS.gene051664.t1 | AT5G65510 | 48.889 | 360 | 146 | 6 | 183 | 505 | 58 | 416 | 4.22e-96 | 305 |
| MS.gene051664.t1 | AT5G65510 | 48.889 | 360 | 146 | 6 | 183 | 505 | 58 | 416 | 4.22e-96 | 305 |
| MS.gene051664.t1 | AT5G65510 | 49.157 | 356 | 143 | 6 | 187 | 505 | 4 | 358 | 7.58e-96 | 302 |
| MS.gene051664.t1 | AT5G10510 | 68.000 | 225 | 71 | 1 | 293 | 517 | 203 | 426 | 2.69e-93 | 299 |
| MS.gene051664.t1 | AT5G10510 | 68.000 | 225 | 71 | 1 | 293 | 517 | 203 | 426 | 2.69e-93 | 299 |
| MS.gene051664.t1 | AT5G10510 | 68.000 | 225 | 71 | 1 | 293 | 517 | 226 | 449 | 2.94e-93 | 300 |
| MS.gene051664.t1 | AT5G10510 | 68.000 | 225 | 71 | 1 | 293 | 517 | 241 | 464 | 3.68e-93 | 300 |
| MS.gene051664.t1 | AT5G10510 | 68.000 | 225 | 71 | 1 | 293 | 517 | 241 | 464 | 3.68e-93 | 300 |
| MS.gene051664.t1 | AT5G10510 | 66.667 | 225 | 71 | 2 | 293 | 517 | 203 | 423 | 9.20e-89 | 287 |
| MS.gene051664.t1 | AT5G10510 | 61.224 | 245 | 74 | 2 | 293 | 517 | 241 | 484 | 4.84e-86 | 282 |
| MS.gene051664.t1 | AT5G65510 | 72.050 | 161 | 45 | 0 | 293 | 453 | 146 | 306 | 1.08e-81 | 261 |
| MS.gene051664.t1 | AT5G65510 | 44.000 | 75 | 34 | 1 | 421 | 487 | 172 | 246 | 5.05e-11 | 65.1 |
| MS.gene051664.t1 | AT3G54320 | 54.622 | 238 | 97 | 3 | 291 | 518 | 31 | 267 | 1.72e-70 | 236 |
| MS.gene051664.t1 | AT3G54320 | 54.622 | 238 | 97 | 3 | 291 | 518 | 31 | 267 | 2.00e-70 | 236 |
| MS.gene051664.t1 | AT1G79700 | 68.639 | 169 | 53 | 0 | 316 | 484 | 48 | 216 | 2.51e-65 | 218 |
| MS.gene051664.t1 | AT1G16060 | 57.534 | 219 | 76 | 3 | 270 | 484 | 17 | 222 | 1.85e-63 | 214 |
| MS.gene051664.t1 | AT1G79700 | 65.089 | 169 | 49 | 1 | 316 | 484 | 48 | 206 | 5.27e-58 | 198 |
| MS.gene051664.t1 | AT3G54320 | 57.647 | 170 | 66 | 2 | 354 | 518 | 33 | 201 | 8.35e-51 | 181 |
| MS.gene051664.t1 | AT3G54320 | 57.647 | 170 | 66 | 2 | 354 | 518 | 33 | 201 | 8.35e-51 | 181 |
| MS.gene051664.t1 | AT5G67180 | 43.830 | 235 | 111 | 4 | 264 | 498 | 50 | 263 | 2.50e-44 | 161 |
| MS.gene051664.t1 | AT5G67180 | 43.348 | 233 | 111 | 4 | 264 | 496 | 50 | 261 | 7.14e-44 | 159 |
| MS.gene051664.t1 | AT4G36920 | 49.261 | 203 | 91 | 4 | 285 | 487 | 97 | 287 | 7.78e-44 | 163 |
| MS.gene051664.t1 | AT4G36920 | 49.261 | 203 | 91 | 4 | 285 | 487 | 97 | 287 | 7.78e-44 | 163 |
| MS.gene051664.t1 | AT5G67180 | 43.830 | 235 | 111 | 4 | 264 | 498 | 50 | 263 | 1.18e-43 | 160 |
| MS.gene051664.t1 | AT1G79700 | 67.176 | 131 | 43 | 0 | 354 | 484 | 10 | 140 | 2.49e-43 | 156 |
| MS.gene051664.t1 | AT2G41710 | 62.879 | 132 | 44 | 1 | 313 | 444 | 63 | 189 | 2.63e-42 | 159 |
| MS.gene051664.t1 | AT2G41710 | 62.879 | 132 | 44 | 1 | 313 | 444 | 63 | 189 | 5.25e-42 | 159 |
| MS.gene051664.t1 | AT1G79700 | 65.891 | 129 | 44 | 0 | 356 | 484 | 6 | 134 | 1.54e-41 | 151 |
| MS.gene051664.t1 | AT1G16060 | 65.414 | 133 | 46 | 0 | 352 | 484 | 20 | 152 | 2.89e-41 | 152 |
| MS.gene051664.t1 | AT2G28550 | 50.575 | 174 | 75 | 3 | 320 | 493 | 153 | 315 | 7.41e-41 | 155 |
| MS.gene051664.t1 | AT2G41710 | 60.584 | 137 | 44 | 2 | 313 | 444 | 63 | 194 | 6.73e-40 | 152 |
| MS.gene051664.t1 | AT2G41710 | 61.157 | 121 | 42 | 1 | 324 | 444 | 109 | 224 | 7.03e-36 | 141 |
| MS.gene051664.t1 | AT5G67180 | 41.089 | 202 | 98 | 4 | 264 | 465 | 50 | 230 | 5.59e-33 | 127 |
| MS.gene051664.t1 | AT2G28550 | 46.552 | 174 | 67 | 4 | 320 | 493 | 153 | 300 | 9.42e-33 | 132 |
| MS.gene051664.t1 | AT2G28550 | 49.645 | 141 | 60 | 3 | 320 | 460 | 153 | 282 | 1.05e-32 | 129 |
| MS.gene051664.t1 | AT1G16060 | 69.318 | 88 | 27 | 0 | 397 | 484 | 1 | 88 | 3.41e-31 | 121 |
| MS.gene051664.t1 | AT1G16060 | 69.318 | 88 | 27 | 0 | 397 | 484 | 1 | 88 | 3.41e-31 | 121 |
| MS.gene051664.t1 | AT1G16060 | 69.318 | 88 | 27 | 0 | 397 | 484 | 1 | 88 | 3.41e-31 | 121 |
| MS.gene051664.t1 | AT1G16060 | 69.318 | 88 | 27 | 0 | 397 | 484 | 1 | 88 | 3.41e-31 | 121 |
| MS.gene051664.t1 | AT3G54320 | 54.331 | 127 | 52 | 2 | 397 | 518 | 1 | 126 | 3.99e-30 | 120 |
| MS.gene051664.t1 | AT2G28550 | 49.606 | 127 | 53 | 3 | 320 | 446 | 153 | 268 | 2.47e-28 | 115 |
| MS.gene051664.t1 | AT2G28550 | 49.606 | 127 | 53 | 3 | 320 | 446 | 153 | 268 | 2.47e-28 | 115 |
| MS.gene051664.t1 | AT2G39250 | 44.643 | 112 | 52 | 2 | 321 | 432 | 109 | 210 | 2.27e-25 | 105 |
| MS.gene051664.t1 | AT2G39250 | 40.196 | 102 | 55 | 3 | 392 | 489 | 76 | 175 | 1.09e-11 | 65.9 |
| MS.gene051664.t1 | AT2G39250 | 44.643 | 112 | 52 | 2 | 321 | 432 | 109 | 210 | 5.81e-25 | 106 |
| MS.gene051664.t1 | AT2G39250 | 40.196 | 102 | 55 | 3 | 392 | 489 | 76 | 175 | 1.08e-11 | 67.0 |
| MS.gene051664.t1 | AT2G28550 | 44.776 | 134 | 58 | 2 | 354 | 487 | 11 | 128 | 1.34e-22 | 99.0 |
| MS.gene051664.t1 | AT5G60120 | 42.236 | 161 | 67 | 5 | 317 | 477 | 157 | 291 | 1.40e-22 | 102 |
| MS.gene051664.t1 | AT5G60120 | 42.236 | 161 | 67 | 5 | 317 | 477 | 157 | 291 | 1.56e-22 | 102 |
| MS.gene051664.t1 | AT5G60120 | 48.062 | 129 | 56 | 3 | 317 | 445 | 157 | 274 | 1.90e-22 | 100 |
| MS.gene051664.t1 | AT5G60120 | 48.062 | 129 | 56 | 3 | 317 | 445 | 157 | 274 | 1.90e-22 | 100 |
| MS.gene051664.t1 | AT5G60120 | 48.062 | 129 | 56 | 3 | 317 | 445 | 157 | 274 | 1.90e-22 | 100 |
| MS.gene051664.t1 | AT5G60120 | 42.236 | 161 | 67 | 5 | 317 | 477 | 157 | 291 | 2.37e-22 | 101 |
| MS.gene051664.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 320 | 426 | 122 | 218 | 2.69e-21 | 94.4 |
| MS.gene051664.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 320 | 426 | 122 | 218 | 1.09e-20 | 94.7 |
| MS.gene051664.t1 | AT1G16060 | 75.439 | 57 | 14 | 0 | 428 | 484 | 10 | 66 | 1.04e-16 | 79.3 |
Find 129 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTTCTTCTTCCATTAA+TGG | 0.183802 | 1.3:-5170364 | None:intergenic |
| ATTGTACATCACAGTTTATT+TGG | 0.185891 | 1.3:+5171812 | MS.gene051664:intron |
| TTTGACCCTGTTGGAGGTTT+TGG | 0.217540 | 1.3:-5173714 | None:intergenic |
| AACATTGTTGTTACACTCTT+TGG | 0.220426 | 1.3:-5173379 | None:intergenic |
| GTAGATATGAAGCACATTTA+TGG | 0.231221 | 1.3:+5171332 | MS.gene051664:CDS |
| CTTCCTTGGTGGTGCAACTA+TGG | 0.232966 | 1.3:+5170171 | MS.gene051664:CDS |
| CCAAATCAGATTTCAGCTTC+TGG | 0.236049 | 1.3:+5170589 | MS.gene051664:CDS |
| ATCTTGCTGCTCTCAAATAT+TGG | 0.242252 | 1.3:+5171979 | MS.gene051664:CDS |
| TGACCAACAATGAAAATAAT+TGG | 0.248259 | 1.3:+5173442 | MS.gene051664:CDS |
| CCAAGGAAGTCTTCTAGTTT+TGG | 0.258754 | 1.3:-5170157 | None:intergenic |
| TAGGCAGAGTAGCTGGAAAT+AGG | 0.259109 | 1.3:+5172849 | MS.gene051664:CDS |
| CAAAGTTTGTCACTGCATTT+AGG | 0.273782 | 1.3:-5173248 | None:intergenic |
| CCAGAAGCTGAAATCTGATT+TGG | 0.290373 | 1.3:-5170589 | None:intergenic |
| CTCACCCTACCACATGAAAA+TGG | 0.295821 | 1.3:+5169628 | MS.gene051664:CDS |
| GGTTCTGTGGGAACAGTTAA+TGG | 0.296492 | 1.3:+5170499 | MS.gene051664:CDS |
| AACACTTCTTCATTATGTTA+TGG | 0.325148 | 1.3:+5169800 | MS.gene051664:CDS |
| TCTTGCTGCTCTCAAATATT+GGG | 0.326373 | 1.3:+5171980 | MS.gene051664:CDS |
| TCTTCATTATGTTATGGTCT+TGG | 0.331906 | 1.3:+5169806 | MS.gene051664:CDS |
| AGGAAAACTATTAGCACATT+TGG | 0.344575 | 1.3:+5170682 | MS.gene051664:CDS |
| GATAGTAGTGATGATGATTT+TGG | 0.349861 | 1.3:-5169697 | None:intergenic |
| AACAATGGCTTTATTAAGCT+TGG | 0.358555 | 1.3:+5170231 | MS.gene051664:CDS |
| TGTTGTCTATCAGGCATAGA+TGG | 0.363633 | 1.3:+5171305 | MS.gene051664:intron |
| AAGAAGTGTTGTTCATGTTT+AGG | 0.365644 | 1.3:-5169787 | None:intergenic |
| ATGAGTCCTTATCATCTTGT+TGG | 0.365906 | 1.3:-5173601 | None:intergenic |
| TTGTACATCACAGTTTATTT+GGG | 0.368466 | 1.3:+5171813 | MS.gene051664:intron |
| TGATGGATCACTTTGCATAA+TGG | 0.375080 | 1.3:+5169880 | MS.gene051664:CDS |
| AAGAGAAGAATGTTCTCTAT+TGG | 0.375080 | 1.3:-5170290 | None:intergenic |
| ACTACTTGACTATGTATGAT+TGG | 0.378303 | 1.3:-5173411 | None:intergenic |
| CATGTCTAGCAACACCTTGC+TGG | 0.378543 | 1.3:+5173299 | MS.gene051664:CDS |
| GGAAATAGGGACCTTTATCT+TGG | 0.378967 | 1.3:+5172863 | MS.gene051664:CDS |
| AATGTATCAAAATCCATTAA+TGG | 0.381901 | 1.3:+5170351 | MS.gene051664:CDS |
| AAGATATGAATAACATGAAT+AGG | 0.388117 | 1.3:+5172248 | MS.gene051664:CDS |
| TACTAAAGGTGGTTATGATA+TGG | 0.390901 | 1.3:+5171932 | MS.gene051664:intron |
| TAGATATGAAGCACATTTAT+GGG | 0.394942 | 1.3:+5171333 | MS.gene051664:CDS |
| GCTATAAATACTTTCTTCCT+TGG | 0.397257 | 1.3:-5170389 | None:intergenic |
| TTGCTACTAATGCTGGATCT+TGG | 0.403005 | 1.3:+5173751 | MS.gene051664:CDS |
| TCAGATTTAAGTGGCATCAT+AGG | 0.407236 | 1.3:-5169860 | None:intergenic |
| AATAATAGTGTTGGTAGTAT+TGG | 0.414510 | 1.3:+5170469 | MS.gene051664:CDS |
| TACTAAATGTCCCAAGATAA+AGG | 0.415804 | 1.3:-5172874 | None:intergenic |
| ATGATGGAAACAATCATAAC+TGG | 0.417826 | 1.3:+5169591 | MS.gene051664:CDS |
| AGTCCTATTGCTACTAATGC+TGG | 0.421274 | 1.3:+5173744 | MS.gene051664:CDS |
| GGAAACAATCATAACTGGTT+AGG | 0.431973 | 1.3:+5169596 | MS.gene051664:CDS |
| CAATCCCAATGATATCTTGT+AGG | 0.432211 | 1.3:-5173536 | None:intergenic |
| ATGTCCCTACAAGATATCAT+TGG | 0.434292 | 1.3:+5173531 | MS.gene051664:CDS |
| GCAAGGATAGGCAGAGTAGC+TGG | 0.444191 | 1.3:+5172842 | MS.gene051664:CDS |
| TCACTCCAAGCCGCGAAAAC+CGG | 0.445495 | 1.3:-5173810 | None:intergenic |
| GAGAAGTTTATATGCGTTGA+AGG | 0.446560 | 1.3:-5172005 | None:intergenic |
| AGGCAGAGTAGCTGGAAATA+GGG | 0.454888 | 1.3:+5172850 | MS.gene051664:CDS |
| TTCAACGCATATAAACTTCT+CGG | 0.459903 | 1.3:+5172007 | MS.gene051664:CDS |
| ATTCTTCCAACAAGATGATA+AGG | 0.467507 | 1.3:+5173595 | MS.gene051664:CDS |
| GATAGTAACATTAGTGATGA+TGG | 0.467678 | 1.3:+5169575 | MS.gene051664:CDS |
| GGCACCACCAGCATGGTAGA+TGG | 0.470143 | 1.3:+5172816 | MS.gene051664:intron |
| GATCCAGCATTAGTAGCAAT+AGG | 0.477963 | 1.3:-5173747 | None:intergenic |
| GTGGGAACAGTTAATGGTTG+TGG | 0.486228 | 1.3:+5170505 | MS.gene051664:CDS |
| TGTCCCTACAAGATATCATT+GGG | 0.488842 | 1.3:+5173532 | MS.gene051664:CDS |
| AGGAGGATCTAGCCAAGTTA+TGG | 0.491829 | 1.3:+5173566 | MS.gene051664:CDS |
| ATGTATTTGACTCTTGTTGT+GGG | 0.492523 | 1.3:-5173473 | None:intergenic |
| GAAATAGGGACCTTTATCTT+GGG | 0.493412 | 1.3:+5172864 | MS.gene051664:CDS |
| CTAAGCCTTTCTATGAGTCC+TGG | 0.494679 | 1.3:+5170541 | MS.gene051664:CDS |
| GTTGGTAGTATTGGAGATGA+TGG | 0.498430 | 1.3:+5170478 | MS.gene051664:CDS |
| AGGGGTGCTTCAATGTATAG+AGG | 0.507777 | 1.3:+5172695 | MS.gene051664:CDS |
| AATCCCAATGATATCTTGTA+GGG | 0.509915 | 1.3:-5173535 | None:intergenic |
| TATGAATAACATGAATAGGC+AGG | 0.510516 | 1.3:+5172252 | MS.gene051664:CDS |
| TTGCTTGCCATCTACCATGC+TGG | 0.513656 | 1.3:-5172823 | None:intergenic |
| CATGTATTTGACTCTTGTTG+TGG | 0.518880 | 1.3:-5173474 | None:intergenic |
| CAAAGAACTTCTCAGTATAG+AGG | 0.520883 | 1.3:+5170706 | MS.gene051664:CDS |
| AAGAGAGGACATGCTAAGGT+TGG | 0.521241 | 1.3:+5170640 | MS.gene051664:CDS |
| AATGTTACTATCATTCATCA+TGG | 0.522034 | 1.3:-5169564 | None:intergenic |
| GACATCAAGTAAAAGTTTGA+AGG | 0.522129 | 1.3:-5169755 | None:intergenic |
| TTCCTTGGTGGTGCAACTAT+GGG | 0.523268 | 1.3:+5170172 | MS.gene051664:CDS |
| CTCAGTATAGAGGAGTTACA+AGG | 0.524809 | 1.3:+5170716 | MS.gene051664:CDS |
| AAGGAAGGGCAAACAAGGAA+AGG | 0.527415 | 1.3:+5171370 | MS.gene051664:CDS |
| TGACTAGTTTAAGTAGCTCA+AGG | 0.531594 | 1.3:+5173646 | MS.gene051664:CDS |
| ACTCATAATCATGAATATGA+AGG | 0.532843 | 1.3:+5170196 | MS.gene051664:CDS |
| CCAAAACTAGAAGACTTCCT+TGG | 0.533305 | 1.3:+5170157 | MS.gene051664:CDS |
| ATGATGCCACTTAAATCTGA+TGG | 0.537511 | 1.3:+5169863 | MS.gene051664:CDS |
| TATTGGAGATGATGGTTCTG+TGG | 0.544033 | 1.3:+5170486 | MS.gene051664:CDS |
| TCTAGCAACACCTTGCTGGC+TGG | 0.544108 | 1.3:+5173303 | MS.gene051664:CDS |
| TTGTCACTGCATTTAGGCCG+CGG | 0.546313 | 1.3:-5173242 | None:intergenic |
| ACACAGCTTGATTGAGAACC+AGG | 0.546355 | 1.3:-5170559 | None:intergenic |
| GCAAGAAGGAAGGGCAAACA+AGG | 0.547287 | 1.3:+5171365 | MS.gene051664:CDS |
| ATGGGATAACAGTTGCAAGA+AGG | 0.549719 | 1.3:+5171351 | MS.gene051664:CDS |
| ATTGGGATTGATTCAGTAGG+AGG | 0.550416 | 1.3:+5173549 | MS.gene051664:CDS |
| AGTGATCCATCAGATTTAAG+TGG | 0.553050 | 1.3:-5169869 | None:intergenic |
| AAGAATCATCTACCATAACT+TGG | 0.553088 | 1.3:-5173578 | None:intergenic |
| TTGTTCATGTTTAGGTGTGA+AGG | 0.554526 | 1.3:-5169779 | None:intergenic |
| TGTATTTGACTCTTGTTGTG+GGG | 0.559834 | 1.3:-5173472 | None:intergenic |
| GACAGAAGCAACCTGCTCAT+AGG | 0.560917 | 1.3:+5170662 | MS.gene051664:CDS |
| TAAATGTGCTTCATATCTAC+CGG | 0.561083 | 1.3:-5171329 | None:intergenic |
| GAGAACCAGGACTCATAGAA+AGG | 0.563571 | 1.3:-5170546 | None:intergenic |
| GGGGTGCTTCAATGTATAGA+GGG | 0.563963 | 1.3:+5172696 | MS.gene051664:CDS |
| AGTCCTGACAACAAAAGTAC+TGG | 0.570426 | 1.3:+5173675 | MS.gene051664:CDS |
| CATAGGTAAAGAAGAATGAA+AGG | 0.572850 | 1.3:-5169843 | None:intergenic |
| GGTAGATGGCAAGCAAGGAT+AGG | 0.573158 | 1.3:+5172830 | MS.gene051664:CDS |
| TCTATCAGGCATAGATGGAC+CGG | 0.575721 | 1.3:+5171310 | MS.gene051664:intron |
| CATCAAGTGAATAATAGTGT+TGG | 0.579792 | 1.3:+5170460 | MS.gene051664:CDS |
| AGCTTGTTCACCAGCCAGCA+AGG | 0.580973 | 1.3:-5173313 | None:intergenic |
| AAACTAGAAGACTTCCTTGG+TGG | 0.581740 | 1.3:+5170160 | MS.gene051664:CDS |
| CAATGTATAGAGGGGTGACA+AGG | 0.582211 | 1.3:+5172705 | MS.gene051664:CDS |
| GATAACAGTTGCAAGAAGGA+AGG | 0.582613 | 1.3:+5171355 | MS.gene051664:CDS |
| AATATGTTGCTCATTTGAGA+AGG | 0.582799 | 1.3:+5172275 | MS.gene051664:CDS |
| AGCATGGTAGATGGCAAGCA+AGG | 0.586051 | 1.3:+5172825 | MS.gene051664:CDS |
| CTAGGATGATGATGTTGAGA+AGG | 0.590125 | 1.3:-5169668 | None:intergenic |
| GAAGGTTGATTGTCATGATG+AGG | 0.593859 | 1.3:-5169719 | None:intergenic |
| TGCTCTAAAGAATAATCTCT+AGG | 0.594882 | 1.3:-5170430 | None:intergenic |
| GACTAGTTTAAGTAGCTCAA+GGG | 0.598107 | 1.3:+5173647 | MS.gene051664:CDS |
| GTTTGAAGGAACAACAGAAG+AGG | 0.602261 | 1.3:-5169741 | None:intergenic |
| TTGGTTTGCAGAAAGAGTAG+TGG | 0.602923 | 1.3:+5172665 | MS.gene051664:intron |
| CATTGAGATAGCACTAGCTG+AGG | 0.605417 | 1.3:-5173778 | None:intergenic |
| CTCACTAGATCACAATCTCA+AGG | 0.609323 | 1.3:+5169911 | MS.gene051664:CDS |
| AGGACATGAAAGAGAAACAA+TGG | 0.613993 | 1.3:+5170216 | MS.gene051664:CDS |
| ATTAAATTCAGGCACTCAAG+AGG | 0.615702 | 1.3:+5173182 | MS.gene051664:intron |
| CTTGCTGCTCTCAAATATTG+GGG | 0.621666 | 1.3:+5171981 | MS.gene051664:CDS |
| GAAGGAACAACAGAAGAGGA+AGG | 0.622143 | 1.3:-5169737 | None:intergenic |
| ATAACAGTTGCAAGAAGGAA+GGG | 0.625126 | 1.3:+5171356 | MS.gene051664:CDS |
| CTTGCCATCTACCATGCTGG+TGG | 0.630256 | 1.3:-5172820 | None:intergenic |
| ATATGGAAGAGAAAGCTGCA+AGG | 0.633701 | 1.3:+5171949 | MS.gene051664:CDS |
| ATTGGAGATGATGGTTCTGT+GGG | 0.634214 | 1.3:+5170487 | MS.gene051664:CDS |
| TATGGAAGAGAAAGCTGCAA+GGG | 0.638891 | 1.3:+5171950 | MS.gene051664:CDS |
| TAGGCCGCGGAATTTGATTG+CGG | 0.639844 | 1.3:-5173229 | None:intergenic |
| TTCCCATAGTTGCACCACCA+AGG | 0.640866 | 1.3:-5170174 | None:intergenic |
| ATCATTGGGATTGATTCAGT+AGG | 0.645337 | 1.3:+5173546 | MS.gene051664:CDS |
| CAAACAAGGAAAGGAAGACA+AGG | 0.651967 | 1.3:+5171379 | MS.gene051664:CDS |
| GGAAGAAGAAGAACAAACCA+AGG | 0.657484 | 1.3:+5170372 | MS.gene051664:CDS |
| TTATGCAGGCACCACCAGCA+TGG | 0.670111 | 1.3:+5172809 | MS.gene051664:intron |
| ATTGAGATAGCACTAGCTGA+GGG | 0.680349 | 1.3:-5173777 | None:intergenic |
| TAGGATGATGATGTTGAGAA+GGG | 0.683404 | 1.3:-5169667 | None:intergenic |
| GGGTGCTTCAATGTATAGAG+GGG | 0.696881 | 1.3:+5172697 | MS.gene051664:CDS |
| GTAGCCGCAATCAAATTCCG+CGG | 0.723888 | 1.3:+5173225 | MS.gene051664:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTAAATAAT+CGG | - | chr1.3:5172139-5172158 | None:intergenic | 0.0% |
| !!! | GTAAAATATTTAAGAATTTT+TGG | - | chr1.3:5171412-5171431 | None:intergenic | 10.0% |
| !! | AAAAAATAGATCTATGAAAA+AGG | - | chr1.3:5171851-5171870 | None:intergenic | 15.0% |
| !! | ACAACTTAAAACTAAAAAAA+TGG | - | chr1.3:5170002-5170021 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTGAATTAAATTC+AGG | + | chr1.3:5173171-5173190 | MS.gene051664:intron | 15.0% |
| !!! | CAGAATTTCTAATTAATTTT+TGG | - | chr1.3:5173503-5173522 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr1.3:5171643-5171662 | MS.gene051664:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr1.3:5171540-5171559 | MS.gene051664:intron | 15.0% |
| !!! | TTTTATTTATTAACATGTGT+GGG | - | chr1.3:5171064-5171083 | None:intergenic | 15.0% |
| !!! | TTTTTAGCATTCAAATTATA+AGG | + | chr1.3:5172956-5172975 | MS.gene051664:intron | 15.0% |
| !!! | TTTTTATTTATTAACATGTG+TGG | - | chr1.3:5171065-5171084 | None:intergenic | 15.0% |
| !! | AAAGAAAGAAAATAAACATG+TGG | - | chr1.3:5169949-5169968 | None:intergenic | 20.0% |
| !! | AAATGTAATGATTAAGAGAA+TGG | + | chr1.3:5171483-5171502 | MS.gene051664:intron | 20.0% |
| !! | AAATTATCCTTATCAACTAT+TGG | + | chr1.3:5171516-5171535 | MS.gene051664:intron | 20.0% |
| !! | AAGATATGAATAACATGAAT+AGG | + | chr1.3:5172248-5172267 | MS.gene051664:CDS | 20.0% |
| !! | AATGTATCAAAATCCATTAA+TGG | + | chr1.3:5170351-5170370 | MS.gene051664:CDS | 20.0% |
| !! | ACCATATATATCAGATATAA+TGG | - | chr1.3:5171890-5171909 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr1.3:5171603-5171622 | MS.gene051664:intron | 20.0% |
| !! | CCATATATATCAGATATAAT+GGG | - | chr1.3:5171889-5171908 | None:intergenic | 20.0% |
| !! | CTAATTTCCTTTATTATCTT+TGG | + | chr1.3:5172197-5172216 | MS.gene051664:intron | 20.0% |
| !! | CTATAACAATCAATTCAAAA+TGG | - | chr1.3:5170117-5170136 | None:intergenic | 20.0% |
| !! | GATGACAAATAATTGAAATA+AGG | - | chr1.3:5171157-5171176 | None:intergenic | 20.0% |
| !! | TAGAGAAGAAAATATACAAT+AGG | - | chr1.3:5172745-5172764 | None:intergenic | 20.0% |
| !! | TTAATTCAGAAAAAATTGCT+AGG | - | chr1.3:5173167-5173186 | None:intergenic | 20.0% |
| !! | TTAGTCTCTTAGAATAATAA+AGG | + | chr1.3:5172373-5172392 | MS.gene051664:intron | 20.0% |
| !! | TTTATTTATTAACATGTGTG+GGG | - | chr1.3:5171063-5171082 | None:intergenic | 20.0% |
| !!! | AAATAAGCTCTAATTATTAG+TGG | - | chr1.3:5170779-5170798 | None:intergenic | 20.0% |
| !!! | AATAAGCTCTAATTATTAGT+GGG | - | chr1.3:5170778-5170797 | None:intergenic | 20.0% |
| !!! | AATAGTTGATAAGGATAATT+TGG | - | chr1.3:5171517-5171536 | None:intergenic | 20.0% |
| !!! | AATGATTTTGTACTAACTTT+AGG | + | chr1.3:5172778-5172797 | MS.gene051664:intron | 20.0% |
| !!! | ATTCCAATTATTTTCATTGT+TGG | - | chr1.3:5173448-5173467 | None:intergenic | 20.0% |
| !!! | CTTTTTACATCTGAAAATAT+TGG | + | chr1.3:5171721-5171740 | MS.gene051664:intron | 20.0% |
| !!! | GATTTTTTCAACATTGTATT+TGG | - | chr1.3:5173280-5173299 | None:intergenic | 20.0% |
| !!! | GCTTATTTTCATAAACTATT+AGG | - | chr1.3:5170038-5170057 | None:intergenic | 20.0% |
| !!! | GTTTGTTAAAATGTTACTAA+AGG | + | chr1.3:5171918-5171937 | MS.gene051664:intron | 20.0% |
| !!! | TAATATATTGACTTGTTTTG+AGG | + | chr1.3:5171113-5171132 | MS.gene051664:intron | 20.0% |
| !!! | TACATGTAAATGCTATTTAT+TGG | - | chr1.3:5172907-5172926 | None:intergenic | 20.0% |
| ! | AACAAAATAACAAGAGTGAA+TGG | - | chr1.3:5172589-5172608 | None:intergenic | 25.0% |
| ! | AACACTTCTTCATTATGTTA+TGG | + | chr1.3:5169800-5169819 | MS.gene051664:CDS | 25.0% |
| ! | AACCTGAAAAATATGAAGAA+TGG | - | chr1.3:5170318-5170337 | None:intergenic | 25.0% |
| ! | AATGTTACTATCATTCATCA+TGG | - | chr1.3:5169567-5169586 | None:intergenic | 25.0% |
| ! | AATTAAAGACTTAGTTGTCT+CGG | + | chr1.3:5172476-5172495 | MS.gene051664:intron | 25.0% |
| ! | ACTCATAATCATGAATATGA+AGG | + | chr1.3:5170196-5170215 | MS.gene051664:CDS | 25.0% |
| ! | ATAAAGGAAATTAGACTCTA+AGG | - | chr1.3:5172191-5172210 | None:intergenic | 25.0% |
| ! | ATTGTACATCACAGTTTATT+TGG | + | chr1.3:5171812-5171831 | MS.gene051664:intron | 25.0% |
| ! | CAAATTATAAGGTAACAACT+TGG | + | chr1.3:5172967-5172986 | MS.gene051664:intron | 25.0% |
| ! | CCCATTATATCTGATATATA+TGG | + | chr1.3:5171886-5171905 | MS.gene051664:intron | 25.0% |
| ! | CTTAAGAGAATAAATTGTGT+TGG | + | chr1.3:5172537-5172556 | MS.gene051664:intron | 25.0% |
| ! | TAGATATGAAGCACATTTAT+GGG | + | chr1.3:5171333-5171352 | MS.gene051664:CDS | 25.0% |
| ! | TGACCAACAATGAAAATAAT+TGG | + | chr1.3:5173442-5173461 | MS.gene051664:CDS | 25.0% |
| ! | TGATGAGAAAGTTTCAAAAA+TGG | + | chr1.3:5171208-5171227 | MS.gene051664:intron | 25.0% |
| ! | TGGTTTATAGAACAAAATAG+AGG | - | chr1.3:5170823-5170842 | None:intergenic | 25.0% |
| ! | TGTTAAAATGTTACTAAAGG+TGG | + | chr1.3:5171921-5171940 | MS.gene051664:intron | 25.0% |
| ! | TTATAGCTTCAAAAACTTTG+TGG | + | chr1.3:5170405-5170424 | MS.gene051664:CDS | 25.0% |
| ! | TTATTTATTAACATGTGTGG+GGG | - | chr1.3:5171062-5171081 | None:intergenic | 25.0% |
| ! | TTCAACCTTAGTGTTTATAT+CGG | + | chr1.3:5170906-5170925 | MS.gene051664:intron | 25.0% |
| ! | TTGTACATCACAGTTTATTT+GGG | + | chr1.3:5171813-5171832 | MS.gene051664:intron | 25.0% |
| ! | TTGTGATACTCAAGAAAAAA+TGG | - | chr1.3:5172563-5172582 | None:intergenic | 25.0% |
| !! | AAACTAACCAATAGTTGATA+AGG | - | chr1.3:5171526-5171545 | None:intergenic | 25.0% |
| !! | ATATCAGATATAATGGGAAT+AGG | - | chr1.3:5171883-5171902 | None:intergenic | 25.0% |
| !! | ATATGATGATACTAAGCTTT+TGG | + | chr1.3:5172642-5172661 | MS.gene051664:intron | 25.0% |
| !! | ATGTAAATGCTATTTATTGG+AGG | - | chr1.3:5172904-5172923 | None:intergenic | 25.0% |
| !! | TATCAGATATAATGGGAATA+GGG | - | chr1.3:5171882-5171901 | None:intergenic | 25.0% |
| !! | TGTAAATGCTATTTATTGGA+GGG | - | chr1.3:5172903-5172922 | None:intergenic | 25.0% |
| !! | TTTAGGTTTAAATGTTATGC+AGG | + | chr1.3:5172795-5172814 | MS.gene051664:intron | 25.0% |
| !!! | AATAATAGTGTTGGTAGTAT+TGG | + | chr1.3:5170469-5170488 | MS.gene051664:CDS | 25.0% |
| !!! | ACTTGTTAACTTGCTATTAT+TGG | + | chr1.3:5172305-5172324 | MS.gene051664:intron | 25.0% |
| !!! | TCTATAAACCAAAGTTGATA+TGG | + | chr1.3:5170832-5170851 | MS.gene051664:intron | 25.0% |
| !!! | TTTTTTTAAATAATCGGGCA+AGG | - | chr1.3:5172133-5172152 | None:intergenic | 25.0% |
| AACAACTAAAACAATTGCCA+AGG | - | chr1.3:5171249-5171268 | None:intergenic | 30.0% | |
| AAGAATCATCTACCATAACT+TGG | - | chr1.3:5173581-5173600 | None:intergenic | 30.0% | |
| AAGAGAAGAATGTTCTCTAT+TGG | - | chr1.3:5170293-5170312 | None:intergenic | 30.0% | |
| AATATGTTGCTCATTTGAGA+AGG | + | chr1.3:5172275-5172294 | MS.gene051664:CDS | 30.0% | |
| ACTACTTGACTATGTATGAT+TGG | - | chr1.3:5173414-5173433 | None:intergenic | 30.0% | |
| AGAGAGTAATGAAAAAACTG+AGG | + | chr1.3:5173356-5173375 | MS.gene051664:CDS | 30.0% | |
| AGGAAAACTATTAGCACATT+TGG | + | chr1.3:5170682-5170701 | MS.gene051664:CDS | 30.0% | |
| ATTCTTCCAACAAGATGATA+AGG | + | chr1.3:5173595-5173614 | MS.gene051664:CDS | 30.0% | |
| CAATCTGCCAAAGATAATAA+AGG | - | chr1.3:5172207-5172226 | None:intergenic | 30.0% | |
| CATAGGTAAAGAAGAATGAA+AGG | - | chr1.3:5169846-5169865 | None:intergenic | 30.0% | |
| CATCAAGTGAATAATAGTGT+TGG | + | chr1.3:5170460-5170479 | MS.gene051664:CDS | 30.0% | |
| GAATTCGAATGGTTTAACTA+TGG | - | chr1.3:5171188-5171207 | None:intergenic | 30.0% | |
| GACAGTTGCAAAATGATTAT+CGG | + | chr1.3:5172080-5172099 | MS.gene051664:intron | 30.0% | |
| GACATCAAGTAAAAGTTTGA+AGG | - | chr1.3:5169758-5169777 | None:intergenic | 30.0% | |
| GATAGTAACATTAGTGATGA+TGG | + | chr1.3:5169575-5169594 | MS.gene051664:CDS | 30.0% | |
| GCTATAAATACTTTCTTCCT+TGG | - | chr1.3:5170392-5170411 | None:intergenic | 30.0% | |
| GTAGATATGAAGCACATTTA+TGG | + | chr1.3:5171332-5171351 | MS.gene051664:CDS | 30.0% | |
| TAAATGTGCTTCATATCTAC+CGG | - | chr1.3:5171332-5171351 | None:intergenic | 30.0% | |
| TACTAAAGGTGGTTATGATA+TGG | + | chr1.3:5171932-5171951 | MS.gene051664:intron | 30.0% | |
| TACTAAATGTCCCAAGATAA+AGG | - | chr1.3:5172877-5172896 | None:intergenic | 30.0% | |
| TATGAATAACATGAATAGGC+AGG | + | chr1.3:5172252-5172271 | MS.gene051664:CDS | 30.0% | |
| TATTTATTAACATGTGTGGG+GGG | - | chr1.3:5171061-5171080 | None:intergenic | 30.0% | |
| TCAACCTTAGTGTTTATATC+GGG | + | chr1.3:5170907-5170926 | MS.gene051664:intron | 30.0% | |
| TCTTCATTATGTTATGGTCT+TGG | + | chr1.3:5169806-5169825 | MS.gene051664:CDS | 30.0% | |
| TGTTCTTCTTCTTCCATTAA+TGG | - | chr1.3:5170367-5170386 | None:intergenic | 30.0% | |
| TTCAACGCATATAAACTTCT+CGG | + | chr1.3:5172007-5172026 | MS.gene051664:CDS | 30.0% | |
| ! | AAAAAATTGCTAGGCGTTTT+AGG | - | chr1.3:5173158-5173177 | None:intergenic | 30.0% |
| ! | AAATCGAGCGAAATTTTTAC+TGG | + | chr1.3:5172156-5172175 | MS.gene051664:intron | 30.0% |
| ! | AACATTGTTGTTACACTCTT+TGG | - | chr1.3:5173382-5173401 | None:intergenic | 30.0% |
| ! | ATGATGGAAACAATCATAAC+TGG | + | chr1.3:5169591-5169610 | MS.gene051664:CDS | 30.0% |
| ! | ATGTATTTGACTCTTGTTGT+GGG | - | chr1.3:5173476-5173495 | None:intergenic | 30.0% |
| ! | GACCATTCTTCATATTTTTC+AGG | + | chr1.3:5170313-5170332 | MS.gene051664:CDS | 30.0% |
| ! | TATCTCAATGTCTCATTTTC+CGG | + | chr1.3:5173791-5173810 | MS.gene051664:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1.3:5171440-5171459 | None:intergenic | 30.0% |
| !! | AAAGAGTAGTGGTTTTTCAA+GGG | + | chr1.3:5172676-5172695 | MS.gene051664:CDS | 30.0% |
| !! | AACAATGGCTTTATTAAGCT+TGG | + | chr1.3:5170231-5170250 | MS.gene051664:CDS | 30.0% |
| !! | AAGAAGTGTTGTTCATGTTT+AGG | - | chr1.3:5169790-5169809 | None:intergenic | 30.0% |
| !! | GATAGTAGTGATGATGATTT+TGG | - | chr1.3:5169700-5169719 | None:intergenic | 30.0% |
| !! | TGCTCTAAAGAATAATCTCT+AGG | - | chr1.3:5170433-5170452 | None:intergenic | 30.0% |
| !! | TTGTTTGTTTGTTGTCTATC+AGG | + | chr1.3:5171296-5171315 | MS.gene051664:intron | 30.0% |
| !!! | AGATGATGCATTTTTTCTCA+AGG | - | chr1.3:5172350-5172369 | None:intergenic | 30.0% |
| !!! | CAAAGTCTCATCAACTTTTT+TGG | + | chr1.3:5173026-5173045 | MS.gene051664:intron | 30.0% |
| !!! | GGTTTTAATTTTATGAGCCT+TGG | + | chr1.3:5171229-5171248 | MS.gene051664:intron | 30.0% |
| !!! | GTTTTGGAAAAAGCATTGTA+GGG | - | chr1.3:5173701-5173720 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr1.3:5171441-5171460 | MS.gene051664:intron | 30.0% |
| !!! | TTTTCAGGTTTTTCTTGTCA+TGG | + | chr1.3:5170328-5170347 | MS.gene051664:CDS | 30.0% |
| AGATCAAACTAGGGTTGAAA+TGG | + | chr1.3:5170883-5170902 | MS.gene051664:intron | 35.0% | |
| AGGACATGAAAGAGAAACAA+TGG | + | chr1.3:5170216-5170235 | MS.gene051664:CDS | 35.0% | |
| AGTGATCCATCAGATTTAAG+TGG | - | chr1.3:5169872-5169891 | None:intergenic | 35.0% | |
| ATAACAGTTGCAAGAAGGAA+GGG | + | chr1.3:5171356-5171375 | MS.gene051664:CDS | 35.0% | |
| ATCTTGCTGCTCTCAAATAT+TGG | + | chr1.3:5171979-5171998 | MS.gene051664:CDS | 35.0% | |
| ATGAGTCCTTATCATCTTGT+TGG | - | chr1.3:5173604-5173623 | None:intergenic | 35.0% | |
| ATGTCCCTACAAGATATCAT+TGG | + | chr1.3:5173531-5173550 | MS.gene051664:CDS | 35.0% | |
| ATTAAATCTGGACCACACAT+TGG | + | chr1.3:5170979-5170998 | MS.gene051664:intron | 35.0% | |
| ATTAAATTCAGGCACTCAAG+AGG | + | chr1.3:5173182-5173201 | MS.gene051664:intron | 35.0% | |
| ATTTGAATGACCATGTGCTA+AGG | - | chr1.3:5173005-5173024 | None:intergenic | 35.0% | |
| CAAAGAACTTCTCAGTATAG+AGG | + | chr1.3:5170706-5170725 | MS.gene051664:CDS | 35.0% | |
| CAAAGTTTGTCACTGCATTT+AGG | - | chr1.3:5173251-5173270 | None:intergenic | 35.0% | |
| CATGTATTTGACTCTTGTTG+TGG | - | chr1.3:5173477-5173496 | None:intergenic | 35.0% | |
| CTTGTGTGACATTAATGTCA+CGG | + | chr1.3:5170952-5170971 | MS.gene051664:intron | 35.0% | |
| CTTTCTCATCAGAATTCGAA+TGG | - | chr1.3:5171199-5171218 | None:intergenic | 35.0% | |
| GAAATAGGGACCTTTATCTT+GGG | + | chr1.3:5172864-5172883 | MS.gene051664:CDS | 35.0% | |
| GAGAAGTTTATATGCGTTGA+AGG | - | chr1.3:5172008-5172027 | None:intergenic | 35.0% | |
| GGAAACAATCATAACTGGTT+AGG | + | chr1.3:5169596-5169615 | MS.gene051664:CDS | 35.0% | |
| GTTGACACAGTTCAGAATAA+TGG | - | chr1.3:5171748-5171767 | None:intergenic | 35.0% | |
| GTTGTTGAAGCTAAAAAGAG+AGG | + | chr1.3:5170625-5170644 | MS.gene051664:CDS | 35.0% | |
| TAAAAAGAGAGGACATGCTA+AGG | + | chr1.3:5170636-5170655 | MS.gene051664:CDS | 35.0% | |
| TCAGATTTAAGTGGCATCAT+AGG | - | chr1.3:5169863-5169882 | None:intergenic | 35.0% | |
| TCCCAACTTATTTGTCTCTA+GGG | - | chr1.3:5172411-5172430 | None:intergenic | 35.0% | |
| TCCCTAGAGACAAATAAGTT+GGG | + | chr1.3:5172407-5172426 | MS.gene051664:intron | 35.0% | |
| TCTTGCTGCTCTCAAATATT+GGG | + | chr1.3:5171980-5171999 | MS.gene051664:CDS | 35.0% | |
| TGGTTTAACTATGGTCGAAT+CGG | - | chr1.3:5171179-5171198 | None:intergenic | 35.0% | |
| TGTCCCTACAAGATATCATT+GGG | + | chr1.3:5173532-5173551 | MS.gene051664:CDS | 35.0% | |
| TTAAATCTGGACCACACATT+GGG | + | chr1.3:5170980-5170999 | MS.gene051664:intron | 35.0% | |
| TTAAGAAGATCCTTAGCACA+TGG | + | chr1.3:5172992-5173011 | MS.gene051664:intron | 35.0% | |
| TTAGCAACGAGATCAAACTA+GGG | + | chr1.3:5170874-5170893 | MS.gene051664:intron | 35.0% | |
| TTGTTCATGTTTAGGTGTGA+AGG | - | chr1.3:5169782-5169801 | None:intergenic | 35.0% | |
| TTTAGCAACGAGATCAAACT+AGG | + | chr1.3:5170873-5170892 | MS.gene051664:intron | 35.0% | |
| ! | AACTAAGCTCCATTTTCATG+TGG | - | chr1.3:5169640-5169659 | None:intergenic | 35.0% |
| ! | ATGATGCCACTTAAATCTGA+TGG | + | chr1.3:5169863-5169882 | MS.gene051664:CDS | 35.0% |
| ! | CTAATAGTTTTCCTATGAGC+AGG | - | chr1.3:5170676-5170695 | None:intergenic | 35.0% |
| ! | GAAAGAGTAGTGGTTTTTCA+AGG | + | chr1.3:5172675-5172694 | MS.gene051664:intron | 35.0% |
| ! | GATGATACTAAGCTTTTGGT+TGG | + | chr1.3:5172646-5172665 | MS.gene051664:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr1.3:5171565-5171584 | MS.gene051664:intron | 35.0% |
| ! | TAGGATGATGATGTTGAGAA+GGG | - | chr1.3:5169670-5169689 | None:intergenic | 35.0% |
| ! | TGATGGATCACTTTGCATAA+TGG | + | chr1.3:5169880-5169899 | MS.gene051664:CDS | 35.0% |
| ! | TGTATTTGACTCTTGTTGTG+GGG | - | chr1.3:5173475-5173494 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr1.3:5171569-5171588 | MS.gene051664:intron | 35.0% |
| ! | TTTTTCCAAAACCTCCAACA+GGG | + | chr1.3:5173709-5173728 | MS.gene051664:CDS | 35.0% |
| !! | AACTTGCTATTATTGGAGTG+AGG | + | chr1.3:5172312-5172331 | MS.gene051664:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.3:5171633-5171652 | MS.gene051664:intron | 35.0% |
| !! | GACTAGTTTAAGTAGCTCAA+GGG | + | chr1.3:5173647-5173666 | MS.gene051664:CDS | 35.0% |
| !! | GTCTCGGTTTATTTTTCTCA+AGG | + | chr1.3:5172492-5172511 | MS.gene051664:intron | 35.0% |
| !! | TGACTAGTTTAAGTAGCTCA+AGG | + | chr1.3:5173646-5173665 | MS.gene051664:CDS | 35.0% |
| !!! | AAGAGTAGTGGTTTTTCAAG+GGG | + | chr1.3:5172677-5172696 | MS.gene051664:CDS | 35.0% |
| !!! | GGTTTTGGAAAAAGCATTGT+AGG | - | chr1.3:5173702-5173721 | None:intergenic | 35.0% |
| !!! | TCTAGTTTTGGAGATGAAGT+TGG | - | chr1.3:5170148-5170167 | None:intergenic | 35.0% |
| !!! | TGATGATTTTGGTGATGACT+AGG | - | chr1.3:5169689-5169708 | None:intergenic | 35.0% |
| AAACTAGAAGACTTCCTTGG+TGG | + | chr1.3:5170160-5170179 | MS.gene051664:CDS | 40.0% | |
| AAGGCCCGATATAAACACTA+AGG | - | chr1.3:5170914-5170933 | None:intergenic | 40.0% | |
| AGTCCTATTGCTACTAATGC+TGG | + | chr1.3:5173744-5173763 | MS.gene051664:CDS | 40.0% | |
| ATATGGAAGAGAAAGCTGCA+AGG | + | chr1.3:5171949-5171968 | MS.gene051664:CDS | 40.0% | |
| ATCTAATGTCACCCAATGTG+TGG | - | chr1.3:5170994-5171013 | None:intergenic | 40.0% | |
| ATGGCACGGTGACATTAATA+AGG | + | chr1.3:5171035-5171054 | MS.gene051664:intron | 40.0% | |
| ATGGGATAACAGTTGCAAGA+AGG | + | chr1.3:5171351-5171370 | MS.gene051664:CDS | 40.0% | |
| ATTGAGATAGCACTAGCTGA+GGG | - | chr1.3:5173780-5173799 | None:intergenic | 40.0% | |
| CAAACAAGGAAAGGAAGACA+AGG | + | chr1.3:5171379-5171398 | MS.gene051664:CDS | 40.0% | |
| CATGTCACATGTTCACAATG+TGG | + | chr1.3:5171771-5171790 | MS.gene051664:intron | 40.0% | |
| CCAAAACTAGAAGACTTCCT+TGG | + | chr1.3:5170157-5170176 | MS.gene051664:CDS | 40.0% | |
| CCAAATCAGATTTCAGCTTC+TGG | + | chr1.3:5170589-5170608 | MS.gene051664:CDS | 40.0% | |
| CCAGAAGCTGAAATCTGATT+TGG | - | chr1.3:5170592-5170611 | None:intergenic | 40.0% | |
| CTCACTAGATCACAATCTCA+AGG | + | chr1.3:5169911-5169930 | MS.gene051664:CDS | 40.0% | |
| CTCAGTATAGAGGAGTTACA+AGG | + | chr1.3:5170716-5170735 | MS.gene051664:CDS | 40.0% | |
| CTTGCTGCTCTCAAATATTG+GGG | + | chr1.3:5171981-5172000 | MS.gene051664:CDS | 40.0% | |
| GATAACAGTTGCAAGAAGGA+AGG | + | chr1.3:5171355-5171374 | MS.gene051664:CDS | 40.0% | |
| GATCCAGCATTAGTAGCAAT+AGG | - | chr1.3:5173750-5173769 | None:intergenic | 40.0% | |
| GGAAATAGGGACCTTTATCT+TGG | + | chr1.3:5172863-5172882 | MS.gene051664:CDS | 40.0% | |
| GGAAGAAGAAGAACAAACCA+AGG | + | chr1.3:5170372-5170391 | MS.gene051664:CDS | 40.0% | |
| GTCCCAACTTATTTGTCTCT+AGG | - | chr1.3:5172412-5172431 | None:intergenic | 40.0% | |
| GTCCCTAGAGACAAATAAGT+TGG | + | chr1.3:5172406-5172425 | MS.gene051664:intron | 40.0% | |
| GTGACATTAGATGTGTTGTG+TGG | + | chr1.3:5171002-5171021 | MS.gene051664:intron | 40.0% | |
| GTTTGAAGGAACAACAGAAG+AGG | - | chr1.3:5169744-5169763 | None:intergenic | 40.0% | |
| TATGGAAGAGAAAGCTGCAA+GGG | + | chr1.3:5171950-5171969 | MS.gene051664:CDS | 40.0% | |
| TCAGCTAGCCATATCAACTT+TGG | - | chr1.3:5170843-5170862 | None:intergenic | 40.0% | |
| TGTCACGGTGACATTAAATC+TGG | + | chr1.3:5170967-5170986 | MS.gene051664:intron | 40.0% | |
| TGTTGTCTATCAGGCATAGA+TGG | + | chr1.3:5171305-5171324 | MS.gene051664:intron | 40.0% | |
| TTGCTACTAATGCTGGATCT+TGG | + | chr1.3:5173751-5173770 | MS.gene051664:CDS | 40.0% | |
| ! | AAAGTTTTTGACCCTGTTGG+AGG | - | chr1.3:5173723-5173742 | None:intergenic | 40.0% |
| ! | AAGCTCCATTTTCATGTGGT+AGG | - | chr1.3:5169636-5169655 | None:intergenic | 40.0% |
| ! | AGCTCCATTTTCATGTGGTA+GGG | - | chr1.3:5169635-5169654 | None:intergenic | 40.0% |
| ! | AGTCCTGACAACAAAAGTAC+TGG | + | chr1.3:5173675-5173694 | MS.gene051664:CDS | 40.0% |
| ! | AGTTGATATGGCTAGCTGAT+TGG | + | chr1.3:5170844-5170863 | MS.gene051664:intron | 40.0% |
| ! | ATTGGAGATGATGGTTCTGT+GGG | + | chr1.3:5170487-5170506 | MS.gene051664:CDS | 40.0% |
| ! | CTAGGATGATGATGTTGAGA+AGG | - | chr1.3:5169671-5169690 | None:intergenic | 40.0% |
| ! | CTCAAAGTTTTTGACCCTGT+TGG | - | chr1.3:5173726-5173745 | None:intergenic | 40.0% |
| ! | CTTTTTCCAAAACCTCCAAC+AGG | + | chr1.3:5173708-5173727 | MS.gene051664:CDS | 40.0% |
| ! | GAAGGTTGATTGTCATGATG+AGG | - | chr1.3:5169722-5169741 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr1.3:5171568-5171587 | MS.gene051664:intron | 40.0% |
| ! | TATTGGAGATGATGGTTCTG+TGG | + | chr1.3:5170486-5170505 | MS.gene051664:CDS | 40.0% |
| ! | TTTTTCTCAAGGACCACAGT+GGG | - | chr1.3:5172339-5172358 | None:intergenic | 40.0% |
| !! | GTTGGTAGTATTGGAGATGA+TGG | + | chr1.3:5170478-5170497 | MS.gene051664:CDS | 40.0% |
| !! | TTGGTTTGCAGAAAGAGTAG+TGG | + | chr1.3:5172665-5172684 | MS.gene051664:intron | 40.0% |
| !!! | CCAAGGAAGTCTTCTAGTTT+TGG | - | chr1.3:5170160-5170179 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.3:5171673-5171692 | MS.gene051664:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.3:5171692-5171673 | None:intergenic | 40.0% |
| !!! | TTTTTTCTCAAGGACCACAG+TGG | - | chr1.3:5172340-5172359 | None:intergenic | 40.0% |
| AAGAGAGGACATGCTAAGGT+TGG | + | chr1.3:5170640-5170659 | MS.gene051664:CDS | 45.0% | |
| AAGGAAGGGCAAACAAGGAA+AGG | + | chr1.3:5171370-5171389 | MS.gene051664:CDS | 45.0% | |
| ACACAGCTTGATTGAGAACC+AGG | - | chr1.3:5170562-5170581 | None:intergenic | 45.0% | |
| AGGAGGATCTAGCCAAGTTA+TGG | + | chr1.3:5173566-5173585 | MS.gene051664:CDS | 45.0% | |
| AGGCAGAGTAGCTGGAAATA+GGG | + | chr1.3:5172850-5172869 | MS.gene051664:CDS | 45.0% | |
| CAATGTATAGAGGGGTGACA+AGG | + | chr1.3:5172705-5172724 | MS.gene051664:CDS | 45.0% | |
| CATTGAGATAGCACTAGCTG+AGG | - | chr1.3:5173781-5173800 | None:intergenic | 45.0% | |
| CGGTATGTTTCACGACATAG+TGG | + | chr1.3:5172027-5172046 | MS.gene051664:intron | 45.0% | |
| CTAAGCCTTTCTATGAGTCC+TGG | + | chr1.3:5170541-5170560 | MS.gene051664:CDS | 45.0% | |
| CTCACCCTACCACATGAAAA+TGG | + | chr1.3:5169628-5169647 | MS.gene051664:CDS | 45.0% | |
| GAAGGAACAACAGAAGAGGA+AGG | - | chr1.3:5169740-5169759 | None:intergenic | 45.0% | |
| GAGAACCAGGACTCATAGAA+AGG | - | chr1.3:5170549-5170568 | None:intergenic | 45.0% | |
| GGGTGCTTCAATGTATAGAG+GGG | + | chr1.3:5172697-5172716 | MS.gene051664:CDS | 45.0% | |
| GGTTCTGTGGGAACAGTTAA+TGG | + | chr1.3:5170499-5170518 | MS.gene051664:CDS | 45.0% | |
| GTGGGAACAGTTAATGGTTG+TGG | + | chr1.3:5170505-5170524 | MS.gene051664:CDS | 45.0% | |
| TAGGCAGAGTAGCTGGAAAT+AGG | + | chr1.3:5172849-5172868 | MS.gene051664:CDS | 45.0% | |
| TCTATCAGGCATAGATGGAC+CGG | + | chr1.3:5171310-5171329 | MS.gene051664:intron | 45.0% | |
| TGTTTATATCGGGCCTTACC+TGG | + | chr1.3:5170917-5170936 | MS.gene051664:intron | 45.0% | |
| ! | GGGGTGCTTCAATGTATAGA+GGG | + | chr1.3:5172696-5172715 | MS.gene051664:CDS | 45.0% |
| ! | GTCTCATTTTCCGGTTTTCG+CGG | + | chr1.3:5173800-5173819 | MS.gene051664:CDS | 45.0% |
| ! | TTTGACCCTGTTGGAGGTTT+TGG | - | chr1.3:5173717-5173736 | None:intergenic | 45.0% |
| !! | AGGGGTGCTTCAATGTATAG+AGG | + | chr1.3:5172695-5172714 | MS.gene051664:CDS | 45.0% |
| !! | TTCCTTGGTGGTGCAACTAT+GGG | + | chr1.3:5170172-5170191 | MS.gene051664:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.3:5171672-5171691 | MS.gene051664:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.3:5171691-5171672 | None:intergenic | 45.0% |
| !! | ATAATAATAATTAAATGTAT+CGG | - | chr1.3:5173070-5173089 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTAAATAATC+GGG | - | chr1.3:5172138-5172157 | None:intergenic | 5.0% |
| AGCATGGTAGATGGCAAGCA+AGG | + | chr1.3:5172825-5172844 | MS.gene051664:CDS | 50.0% | |
| AGTTCGTGTCTGTCTCGTGT+TGG | + | chr1.3:5173112-5173131 | MS.gene051664:intron | 50.0% | |
| CACAAGTATTTCCCTTCGCC+AGG | - | chr1.3:5170938-5170957 | None:intergenic | 50.0% | |
| CATGTCTAGCAACACCTTGC+TGG | + | chr1.3:5173299-5173318 | MS.gene051664:CDS | 50.0% | |
| GACAGAAGCAACCTGCTCAT+AGG | + | chr1.3:5170662-5170681 | MS.gene051664:CDS | 50.0% | |
| GCAAGAAGGAAGGGCAAACA+AGG | + | chr1.3:5171365-5171384 | MS.gene051664:CDS | 50.0% | |
| GGTAGATGGCAAGCAAGGAT+AGG | + | chr1.3:5172830-5172849 | MS.gene051664:CDS | 50.0% | |
| GTAGCCGCAATCAAATTCCG+CGG | + | chr1.3:5173225-5173244 | MS.gene051664:CDS | 50.0% | |
| GTATTTCCCTTCGCCAGGTA+AGG | - | chr1.3:5170933-5170952 | None:intergenic | 50.0% | |
| TAGGCCGCGGAATTTGATTG+CGG | - | chr1.3:5173232-5173251 | None:intergenic | 50.0% | |
| TTCCCATAGTTGCACCACCA+AGG | - | chr1.3:5170177-5170196 | None:intergenic | 50.0% | |
| TTGCTTGCCATCTACCATGC+TGG | - | chr1.3:5172826-5172845 | None:intergenic | 50.0% | |
| TTGTCACTGCATTTAGGCCG+CGG | - | chr1.3:5173245-5173264 | None:intergenic | 50.0% | |
| ! | ATTTTCCGGTTTTCGCGGCT+TGG | + | chr1.3:5173805-5173824 | MS.gene051664:CDS | 50.0% |
| !! | CTTCCTTGGTGGTGCAACTA+TGG | + | chr1.3:5170171-5170190 | MS.gene051664:CDS | 50.0% |
| !! | GGGCCAGTACTTTTGTTGTC+AGG | - | chr1.3:5173681-5173700 | None:intergenic | 50.0% |
| ATTGGAGTGAGGACCCACTG+TGG | + | chr1.3:5172323-5172342 | MS.gene051664:intron | 55.0% | |
| CTTGCCATCTACCATGCTGG+TGG | - | chr1.3:5172823-5172842 | None:intergenic | 55.0% | |
| GCAAGGATAGGCAGAGTAGC+TGG | + | chr1.3:5172842-5172861 | MS.gene051664:CDS | 55.0% | |
| GTTGTGTGGCCCAGATGCAA+TGG | + | chr1.3:5171016-5171035 | MS.gene051664:intron | 55.0% | |
| TCACTCCAAGCCGCGAAAAC+CGG | - | chr1.3:5173813-5173832 | None:intergenic | 55.0% | |
| TCTAGCAACACCTTGCTGGC+TGG | + | chr1.3:5173303-5173322 | MS.gene051664:CDS | 55.0% | |
| TTATGCAGGCACCACCAGCA+TGG | + | chr1.3:5172809-5172828 | MS.gene051664:intron | 55.0% | |
| ! | AGCTTGTTCACCAGCCAGCA+AGG | - | chr1.3:5173316-5173335 | None:intergenic | 55.0% |
| ! | GTCACCGTGCCATTGCATCT+GGG | - | chr1.3:5171028-5171047 | None:intergenic | 55.0% |
| ! | TGTCACCGTGCCATTGCATC+TGG | - | chr1.3:5171029-5171048 | None:intergenic | 55.0% |
| ATCGGGCCTTACCTGGCGAA+GGG | + | chr1.3:5170924-5170943 | MS.gene051664:intron | 60.0% | |
| GGCACCACCAGCATGGTAGA+TGG | + | chr1.3:5172816-5172835 | MS.gene051664:intron | 60.0% | |
| GTGGCCCAGATGCAATGGCA+CGG | + | chr1.3:5171021-5171040 | MS.gene051664:intron | 60.0% | |
| TATCGGGCCTTACCTGGCGA+AGG | + | chr1.3:5170923-5170942 | MS.gene051664:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5169557 | 5173839 | 5169557 | ID=MS.gene051664 |
| chr1.3 | mRNA | 5169557 | 5173839 | 5169557 | ID=MS.gene051664.t1;Parent=MS.gene051664 |
| chr1.3 | exon | 5169557 | 5169932 | 5169557 | ID=MS.gene051664.t1.exon1;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5169557 | 5169932 | 5169557 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5170137 | 5170737 | 5170137 | ID=MS.gene051664.t1.exon2;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5170137 | 5170737 | 5170137 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5171318 | 5171400 | 5171318 | ID=MS.gene051664.t1.exon3;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5171318 | 5171400 | 5171318 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5171826 | 5171834 | 5171826 | ID=MS.gene051664.t1.exon4;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5171826 | 5171834 | 5171826 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5171940 | 5172028 | 5171940 | ID=MS.gene051664.t1.exon5;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5171940 | 5172028 | 5171940 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5172223 | 5172296 | 5172223 | ID=MS.gene051664.t1.exon6;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5172223 | 5172296 | 5172223 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5172676 | 5172726 | 5172676 | ID=MS.gene051664.t1.exon7;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5172676 | 5172726 | 5172676 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5172817 | 5172893 | 5172817 | ID=MS.gene051664.t1.exon8;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5172817 | 5172893 | 5172817 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| chr1.3 | exon | 5173193 | 5173839 | 5173193 | ID=MS.gene051664.t1.exon9;Parent=MS.gene051664.t1 |
| chr1.3 | CDS | 5173193 | 5173839 | 5173193 | ID=cds.MS.gene051664.t1;Parent=MS.gene051664.t1 |
| Gene Sequence |
| Protein sequence |
