Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067430.t1 | XP_024633021.1 | 98.2 | 487 | 9 | 0 | 1 | 487 | 1 | 487 | 4.70E-225 | 790.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067430.t1 | Q9M8L9 | 68.1 | 489 | 147 | 3 | 6 | 487 | 2 | 488 | 9.4e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067430.t1 | G7IIA0 | 98.2 | 487 | 9 | 0 | 1 | 487 | 1 | 487 | 3.4e-225 | 790.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060563 | MS.gene067430 | 0.807503 | 4.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018235 | MS.gene067430 | PPI |
| MS.gene62008 | MS.gene067430 | PPI |
| MS.gene067430 | MS.gene37165 | PPI |
| MS.gene067430 | MS.gene37173 | PPI |
| MS.gene067430 | MS.gene018234 | PPI |
| MS.gene067430 | MS.gene44762 | PPI |
| MS.gene067430 | MS.gene37166 | PPI |
| MS.gene75991 | MS.gene067430 | PPI |
| MS.gene067430 | MS.gene018243 | PPI |
| MS.gene022024 | MS.gene067430 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067430.t1 | MTR_2g104180 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 966 |
| MS.gene067430.t1 | MTR_7g017630 | 45.433 | 416 | 218 | 4 | 73 | 483 | 47 | 458 | 6.25e-118 | 354 |
| MS.gene067430.t1 | MTR_6g016245 | 44.762 | 420 | 224 | 4 | 73 | 487 | 38 | 454 | 1.41e-112 | 340 |
| MS.gene067430.t1 | MTR_6g016295 | 43.961 | 414 | 224 | 4 | 79 | 487 | 46 | 456 | 8.75e-107 | 325 |
| MS.gene067430.t1 | MTR_6g016275 | 44.313 | 422 | 224 | 6 | 73 | 487 | 43 | 460 | 1.11e-106 | 325 |
| MS.gene067430.t1 | MTR_5g083770 | 40.749 | 427 | 245 | 5 | 62 | 483 | 5 | 428 | 6.88e-106 | 322 |
| MS.gene067430.t1 | MTR_3g072110 | 39.070 | 430 | 253 | 5 | 64 | 487 | 12 | 438 | 6.84e-103 | 315 |
| MS.gene067430.t1 | MTR_6g016270 | 43.095 | 420 | 231 | 4 | 73 | 487 | 45 | 461 | 1.02e-102 | 315 |
| MS.gene067430.t1 | MTR_5g083760 | 38.679 | 424 | 247 | 7 | 69 | 485 | 28 | 445 | 1.95e-95 | 296 |
| MS.gene067430.t1 | MTR_1396s0010 | 41.509 | 265 | 131 | 3 | 222 | 486 | 1 | 241 | 2.21e-59 | 196 |
| MS.gene067430.t1 | MTR_1396s0010 | 45.320 | 203 | 109 | 1 | 202 | 404 | 1 | 201 | 1.29e-51 | 174 |
| MS.gene067430.t1 | MTR_6g016245 | 45.000 | 200 | 106 | 3 | 289 | 487 | 190 | 386 | 1.08e-42 | 156 |
| MS.gene067430.t1 | MTR_6g016245 | 46.053 | 152 | 78 | 1 | 73 | 220 | 38 | 189 | 5.80e-36 | 137 |
| MS.gene067430.t1 | MTR_8g065630 | 40.212 | 189 | 109 | 1 | 47 | 231 | 23 | 211 | 5.91e-38 | 138 |
| MS.gene067430.t1 | MTR_6g024240 | 35.424 | 271 | 116 | 5 | 219 | 487 | 39 | 252 | 1.06e-36 | 136 |
| MS.gene067430.t1 | MTR_8g065650 | 49.020 | 153 | 74 | 1 | 79 | 227 | 55 | 207 | 2.02e-36 | 142 |
| MS.gene067430.t1 | MTR_0658s0030 | 43.636 | 110 | 61 | 1 | 367 | 476 | 1 | 109 | 4.80e-21 | 89.0 |
| MS.gene067430.t1 | MTR_3g072105 | 40.217 | 92 | 54 | 1 | 71 | 162 | 19 | 109 | 6.37e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067430.t1 | AT1G80510 | 71.779 | 489 | 129 | 3 | 6 | 487 | 2 | 488 | 0.0 | 677 |
| MS.gene067430.t1 | AT3G30390 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.34e-123 | 367 |
| MS.gene067430.t1 | AT3G30390 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.34e-123 | 367 |
| MS.gene067430.t1 | AT3G30390 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.34e-123 | 367 |
| MS.gene067430.t1 | AT5G38820 | 45.238 | 420 | 221 | 4 | 73 | 486 | 33 | 449 | 5.06e-121 | 362 |
| MS.gene067430.t1 | AT5G38820 | 45.238 | 420 | 221 | 4 | 73 | 486 | 33 | 449 | 5.06e-121 | 362 |
| MS.gene067430.t1 | AT5G38820 | 45.238 | 420 | 221 | 4 | 73 | 486 | 38 | 454 | 5.68e-121 | 362 |
| MS.gene067430.t1 | AT3G56200 | 39.618 | 419 | 246 | 3 | 72 | 486 | 20 | 435 | 4.30e-100 | 308 |
| MS.gene067430.t1 | AT2G40420 | 38.186 | 419 | 250 | 5 | 72 | 485 | 22 | 436 | 5.93e-89 | 279 |
Find 104 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGTTCGGTTCATCATTT+AGG | 0.170468 | 2.4:-1423708 | MS.gene067430:CDS |
| AATTGTTTATTTGATTATAA+TGG | 0.179616 | 2.4:-1423742 | MS.gene067430:CDS |
| ATTTGACTACTACTATTATT+GGG | 0.217290 | 2.4:-1423992 | MS.gene067430:CDS |
| AATTTGACTACTACTATTAT+TGG | 0.222548 | 2.4:-1423993 | MS.gene067430:CDS |
| AGTTGATGGGGAATGGGGTT+TGG | 0.254515 | 2.4:-1423674 | MS.gene067430:CDS |
| TATTATTGGGGCAGGAATTA+TGG | 0.256792 | 2.4:-1423979 | MS.gene067430:CDS |
| CCGGTTCGGTTCATCATTTA+GGG | 0.262632 | 2.4:-1423707 | MS.gene067430:CDS |
| ATTGTTTATTTGATTATAAT+GGG | 0.268720 | 2.4:-1423741 | MS.gene067430:CDS |
| CCTGCTACCATGAAAGTTCT+TGG | 0.277184 | 2.4:-1423951 | MS.gene067430:CDS |
| CTCTTCCTACTTTCTGATAA+AGG | 0.295674 | 2.4:+1423069 | None:intergenic |
| GCTTGTGATTCTTGTTGTTA+TGG | 0.306594 | 2.4:-1423640 | MS.gene067430:CDS |
| GTTGATGGGGAATGGGGTTT+GGG | 0.307539 | 2.4:-1423673 | MS.gene067430:CDS |
| GATAATTATCCTCTTGTTGT+TGG | 0.311646 | 2.4:-1424059 | MS.gene067430:CDS |
| CTGTCCGGTTACCTATTATT+CGG | 0.316049 | 2.4:-1423270 | MS.gene067430:CDS |
| TTGATCAGTTGATGGGGAAT+GGG | 0.317412 | 2.4:-1423680 | MS.gene067430:CDS |
| TTAAAAGCTGTCCAGATGTT+TGG | 0.318283 | 2.4:+1422988 | None:intergenic |
| CGTAGTGAGAAATGAATAAC+AGG | 0.324473 | 2.4:+1423129 | None:intergenic |
| TGTCCGGTTACCTATTATTC+GGG | 0.327444 | 2.4:-1423269 | MS.gene067430:CDS |
| CAGTATCATCCCCGAATAAT+AGG | 0.328662 | 2.4:+1423259 | None:intergenic |
| ACATATGCATTTGTCATGAT+TGG | 0.339398 | 2.4:+1423411 | None:intergenic |
| TTTGATCAGTTGATGGGGAA+TGG | 0.352760 | 2.4:-1423681 | MS.gene067430:CDS |
| GCTGTGACTGTTAGCATTGT+AGG | 0.358697 | 2.4:-1422838 | MS.gene067430:CDS |
| TGCAATAAGATTAAGTCATC+AGG | 0.366366 | 2.4:-1422911 | MS.gene067430:CDS |
| CTGTTGGTTCTCATATATAT+CGG | 0.366555 | 2.4:-1423024 | MS.gene067430:CDS |
| GTCATGGTTAATGTTGGTAT+TGG | 0.367428 | 2.4:-1422860 | MS.gene067430:CDS |
| GGTACACCAGACCCGTGATT+TGG | 0.370920 | 2.4:+1424029 | None:intergenic |
| AACAACACCAAGAACTTTCA+TGG | 0.378312 | 2.4:+1423944 | None:intergenic |
| ATGTGTAAAGCGTCATCTTA+TGG | 0.399986 | 2.4:-1423846 | MS.gene067430:CDS |
| CCGATATACAACGAGCTTGA+AGG | 0.427017 | 2.4:-1423369 | MS.gene067430:CDS |
| TCTTGGAATCCGGTTTAGTT+CGG | 0.429060 | 2.4:-1423205 | MS.gene067430:CDS |
| GTGGATACTTTGGTATTTGA+GGG | 0.430206 | 2.4:-1423099 | MS.gene067430:CDS |
| TGTCCAGATGTTTGGAATCA+TGG | 0.438941 | 2.4:+1422996 | None:intergenic |
| AGTGGATACTTTGGTATTTG+AGG | 0.440264 | 2.4:-1423100 | MS.gene067430:CDS |
| TGATCAGTTGATGGGGAATG+GGG | 0.440283 | 2.4:-1423679 | MS.gene067430:CDS |
| CCTTCAAGCTCGTTGTATAT+CGG | 0.440630 | 2.4:+1423369 | None:intergenic |
| AAATATGATGAAGAACTAAC+AGG | 0.441010 | 2.4:+1424203 | None:intergenic |
| GGAATGGGGTTTGGGATCAG+AGG | 0.442360 | 2.4:-1423665 | MS.gene067430:CDS |
| AGTTCAAGGCCGAACTAAAC+CGG | 0.446759 | 2.4:+1423196 | None:intergenic |
| GTACCATGATTCCAAACATC+TGG | 0.451690 | 2.4:-1422999 | MS.gene067430:CDS |
| CCAGACCCGTGATTTGGAAT+AGG | 0.454182 | 2.4:+1424035 | None:intergenic |
| GCAACAACGGCTGTTTCGTT+AGG | 0.456316 | 2.4:-1422955 | MS.gene067430:CDS |
| CTAAAATCAGGAACCATCCT+AGG | 0.459986 | 2.4:+1423471 | None:intergenic |
| CAGGGAAAACAAGTATCAAA+TGG | 0.460714 | 2.4:+1423148 | None:intergenic |
| GTTAGCATTGTAGGAGTTGT+CGG | 0.463076 | 2.4:-1422829 | MS.gene067430:CDS |
| TTGATAAGGATCTTGGAATC+CGG | 0.468353 | 2.4:-1423215 | MS.gene067430:CDS |
| ATGCTATGGGTAGGCCTGCT+AGG | 0.468880 | 2.4:-1423809 | MS.gene067430:CDS |
| CCCTAAATGATGAACCGAAC+CGG | 0.471664 | 2.4:+1423707 | None:intergenic |
| GGAAATTAGTGTCGAATTGT+TGG | 0.479421 | 2.4:-1423883 | MS.gene067430:CDS |
| ATACCAAAGTATCCACTGTT+TGG | 0.479637 | 2.4:+1423106 | None:intergenic |
| GAGCTTGACTTCAGCTGCAT+CGG | 0.488598 | 2.4:-1423571 | MS.gene067430:CDS |
| TATGCTGCAACGGCACTGTC+CGG | 0.495004 | 2.4:-1423285 | MS.gene067430:CDS |
| ATCCCCGAATAATAGGTAAC+CGG | 0.498976 | 2.4:+1423266 | None:intergenic |
| GAAAGTAGGAAGAGATCGCT+AGG | 0.504058 | 2.4:-1423060 | MS.gene067430:CDS |
| TGTTTATTTGATTATAATGG+GGG | 0.506452 | 2.4:-1423739 | MS.gene067430:CDS |
| GTTGGTCCTATTCCAAATCA+CGG | 0.506802 | 2.4:-1424041 | MS.gene067430:CDS |
| CCTATTCCAAATCACGGGTC+TGG | 0.511638 | 2.4:-1424035 | MS.gene067430:CDS |
| GACTCGAACGATATAGTTCA+AGG | 0.512418 | 2.4:+1423182 | None:intergenic |
| GAGATTTGAGCCGCGTAGAA+CGG | 0.523045 | 2.4:-1422888 | MS.gene067430:CDS |
| CCAAGAACTTTCATGGTAGC+AGG | 0.523622 | 2.4:+1423951 | None:intergenic |
| AGGGCTGACTGCAATTCTGT+TGG | 0.526397 | 2.4:-1423040 | MS.gene067430:CDS |
| CTTGACTTCAGCTGCATCGG+TGG | 0.528392 | 2.4:-1423568 | MS.gene067430:CDS |
| ACGCCAAACAGTGGATACTT+TGG | 0.531176 | 2.4:-1423109 | MS.gene067430:CDS |
| ATCTCAGATAAAATCCTAGC+AGG | 0.533652 | 2.4:+1423795 | None:intergenic |
| AATCACGGGTCTGGTGTACC+TGG | 0.537363 | 2.4:-1424026 | MS.gene067430:CDS |
| TTGTTTATTTGATTATAATG+GGG | 0.537532 | 2.4:-1423740 | MS.gene067430:CDS |
| ATCTAAGGTTGATGATGATG+AGG | 0.540722 | 2.4:-1424105 | MS.gene067430:CDS |
| AATCTTATTGCAACAAGAGG+TGG | 0.543383 | 2.4:+1422922 | None:intergenic |
| ACTACTACTATTATTGGGGC+AGG | 0.544363 | 2.4:-1423987 | MS.gene067430:CDS |
| TGAGGTTGTTCAACATGCTA+TGG | 0.553920 | 2.4:-1423823 | MS.gene067430:CDS |
| AGATGACGCTTTACACATAA+CGG | 0.555189 | 2.4:+1423851 | None:intergenic |
| TTGGTCCTATTCCAAATCAC+GGG | 0.557232 | 2.4:-1424040 | MS.gene067430:CDS |
| TGTGATTCTTGTTGTTATGG+TGG | 0.559947 | 2.4:-1423637 | MS.gene067430:CDS |
| TTGTAGTGACCCTTCCTACT+CGG | 0.560230 | 2.4:+1423325 | None:intergenic |
| AAGGAAAGATTGATGCTCCT+AGG | 0.564135 | 2.4:-1423488 | MS.gene067430:CDS |
| CACCTCCTTTATCAGAAAGT+AGG | 0.564200 | 2.4:-1423074 | MS.gene067430:CDS |
| CATCATGGTTTATGCTGCAA+CGG | 0.568976 | 2.4:-1423295 | MS.gene067430:CDS |
| AGAAGATGAACCGAGTAGGA+AGG | 0.574177 | 2.4:-1423335 | MS.gene067430:CDS |
| CAAATAAACAATTAAAACAC+CGG | 0.582905 | 2.4:+1423752 | None:intergenic |
| TTTGACTACTACTATTATTG+GGG | 0.583048 | 2.4:-1423991 | MS.gene067430:CDS |
| CTTAATCTTATTGCAACAAG+AGG | 0.584381 | 2.4:+1422919 | None:intergenic |
| AAAGATTGATGCTCCTAGGA+TGG | 0.587388 | 2.4:-1423484 | MS.gene067430:CDS |
| GAGGTTGTTCAACATGCTAT+GGG | 0.595730 | 2.4:-1423822 | MS.gene067430:CDS |
| GAAGATGAACCGAGTAGGAA+GGG | 0.598449 | 2.4:-1423334 | MS.gene067430:CDS |
| GCAATAAGATTAAGTCATCA+GGG | 0.602082 | 2.4:-1422910 | MS.gene067430:CDS |
| GGAATAGGACCAACAACAAG+AGG | 0.604623 | 2.4:+1424050 | None:intergenic |
| TGTCGGCAATGTCTATAGCA+TGG | 0.606367 | 2.4:-1422812 | MS.gene067430:CDS |
| TTGTTCAACATGCTATGGGT+AGG | 0.614131 | 2.4:-1423818 | MS.gene067430:CDS |
| TAAGGTTGATGATGATGAGG+AGG | 0.622414 | 2.4:-1424102 | MS.gene067430:CDS |
| GTCAAATTAAACACAGCACC+AGG | 0.622692 | 2.4:+1424008 | None:intergenic |
| TTTCTCACTACGCCAAACAG+TGG | 0.625897 | 2.4:-1423118 | MS.gene067430:CDS |
| CCTACTCGGTTCATCTTCTG+CGG | 0.628118 | 2.4:+1423339 | None:intergenic |
| TAAGTTCACAGGTGCAACAA+CGG | 0.628689 | 2.4:-1422968 | MS.gene067430:CDS |
| TTCCTACTTTCTGATAAAGG+AGG | 0.633147 | 2.4:+1423072 | None:intergenic |
| TTAGTGTCGAATTGTTGGTG+AGG | 0.634170 | 2.4:-1423878 | MS.gene067430:CDS |
| AAAGTAGGAAGAGATCGCTA+GGG | 0.636934 | 2.4:-1423059 | MS.gene067430:CDS |
| GTCCGGTTACCTATTATTCG+GGG | 0.637678 | 2.4:-1423268 | MS.gene067430:CDS |
| CGGTTCGGTTCATCATTTAG+GGG | 0.639831 | 2.4:-1423706 | MS.gene067430:CDS |
| CCGCAGAAGATGAACCGAGT+AGG | 0.645116 | 2.4:-1423339 | MS.gene067430:CDS |
| ATCTTATCAAGCGAACAAAG+TGG | 0.658267 | 2.4:+1423603 | None:intergenic |
| TATACAACGAGCTTGAAGGT+AGG | 0.669040 | 2.4:-1423365 | MS.gene067430:CDS |
| TTGAACTATATCGTTCGAGT+CGG | 0.681194 | 2.4:-1423180 | MS.gene067430:CDS |
| TAAAGCGTCATCTTATGGTG+AGG | 0.735180 | 2.4:-1423841 | MS.gene067430:CDS |
| ATGACAAAATCCGTTCTACG+CGG | 0.759656 | 2.4:+1422878 | None:intergenic |
| GTAGTGAGAAATGAATAACA+GGG | 0.781956 | 2.4:+1423130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTTTATTTGATTATAA+TGG | - | chr2.4:1423295-1423314 | MS.gene067430:CDS | 10.0% |
| !! | ATTGTTTATTTGATTATAAT+GGG | - | chr2.4:1423296-1423315 | MS.gene067430:CDS | 10.0% |
| !! | TTGTTTATTTGATTATAATG+GGG | - | chr2.4:1423297-1423316 | MS.gene067430:CDS | 15.0% |
| !! | AATTTGACTACTACTATTAT+TGG | - | chr2.4:1423044-1423063 | MS.gene067430:CDS | 20.0% |
| !! | ATTTGACTACTACTATTATT+GGG | - | chr2.4:1423045-1423064 | MS.gene067430:CDS | 20.0% |
| !! | CAAATAAACAATTAAAACAC+CGG | + | chr2.4:1423288-1423307 | None:intergenic | 20.0% |
| !! | TGTTTATTTGATTATAATGG+GGG | - | chr2.4:1423298-1423317 | MS.gene067430:CDS | 20.0% |
| !!! | ATTGTCTTGATTATTTTGAT+GGG | - | chr2.4:1423122-1423141 | MS.gene067430:CDS | 20.0% |
| !!! | TGTTTTGACTAATTTTGATA+AGG | - | chr2.4:1423808-1423827 | MS.gene067430:CDS | 20.0% |
| ! | AAATATGATGAAGAACTAAC+AGG | + | chr2.4:1422837-1422856 | None:intergenic | 25.0% |
| ! | TTTGACTACTACTATTATTG+GGG | - | chr2.4:1423046-1423065 | MS.gene067430:CDS | 25.0% |
| !! | CAAAGATTATCTTTTGATGA+GGG | - | chr2.4:1422894-1422913 | MS.gene067430:CDS | 25.0% |
| !! | TCAAAGATTATCTTTTGATG+AGG | - | chr2.4:1422893-1422912 | MS.gene067430:CDS | 25.0% |
| !!! | ACTAATTTTGATAAGGATCT+TGG | - | chr2.4:1423815-1423834 | MS.gene067430:CDS | 25.0% |
| !!! | GATTGTCTTGATTATTTTGA+TGG | - | chr2.4:1423121-1423140 | MS.gene067430:CDS | 25.0% |
| !!! | TGTATTATTTTGAACAATGC+CGG | - | chr2.4:1423266-1423285 | MS.gene067430:CDS | 25.0% |
| !!! | TTGTCTTGATTATTTTGATG+GGG | - | chr2.4:1423123-1423142 | MS.gene067430:CDS | 25.0% |
| ACATATGCATTTGTCATGAT+TGG | + | chr2.4:1423629-1423648 | None:intergenic | 30.0% | |
| CTTAATCTTATTGCAACAAG+AGG | + | chr2.4:1424121-1424140 | None:intergenic | 30.0% | |
| GCAATAAGATTAAGTCATCA+GGG | - | chr2.4:1424127-1424146 | MS.gene067430:CDS | 30.0% | |
| GTAGTGAGAAATGAATAACA+GGG | + | chr2.4:1423910-1423929 | None:intergenic | 30.0% | |
| TGCAATAAGATTAAGTCATC+AGG | - | chr2.4:1424126-1424145 | MS.gene067430:CDS | 30.0% | |
| ! | GATAATTATCCTCTTGTTGT+TGG | - | chr2.4:1422978-1422997 | MS.gene067430:CDS | 30.0% |
| ! | GATTTTGTCATGGTTAATGT+TGG | - | chr2.4:1424171-1424190 | MS.gene067430:CDS | 30.0% |
| !! | CTGTTGGTTCTCATATATAT+CGG | - | chr2.4:1424013-1424032 | MS.gene067430:CDS | 30.0% |
| !! | GATTTTGATGAATCATTCTG+TGG | + | chr2.4:1422870-1422889 | None:intergenic | 30.0% |
| !!! | AAAGTTCTTGGTGTTGTTTT+AGG | - | chr2.4:1423098-1423117 | MS.gene067430:CDS | 30.0% |
| !!! | AAGTTCTTGGTGTTGTTTTA+GGG | - | chr2.4:1423099-1423118 | MS.gene067430:CDS | 30.0% |
| !!! | GCTTTTATTAAGCTTGTTGA+AGG | - | chr2.4:1423530-1423549 | MS.gene067430:CDS | 30.0% |
| !!! | TATTTTGATGGGGATTTTGT+CGG | - | chr2.4:1423133-1423152 | MS.gene067430:CDS | 30.0% |
| AACAACACCAAGAACTTTCA+TGG | + | chr2.4:1423096-1423115 | None:intergenic | 35.0% | |
| AATCTTATTGCAACAAGAGG+TGG | + | chr2.4:1424118-1424137 | None:intergenic | 35.0% | |
| AGATGACGCTTTACACATAA+CGG | + | chr2.4:1423189-1423208 | None:intergenic | 35.0% | |
| AGTGGATACTTTGGTATTTG+AGG | - | chr2.4:1423937-1423956 | MS.gene067430:CDS | 35.0% | |
| ATCTCAGATAAAATCCTAGC+AGG | + | chr2.4:1423245-1423264 | None:intergenic | 35.0% | |
| ATCTTATCAAGCGAACAAAG+TGG | + | chr2.4:1423437-1423456 | None:intergenic | 35.0% | |
| CAGGGAAAACAAGTATCAAA+TGG | + | chr2.4:1423892-1423911 | None:intergenic | 35.0% | |
| CGTAGTGAGAAATGAATAAC+AGG | + | chr2.4:1423911-1423930 | None:intergenic | 35.0% | |
| CTCTTCCTACTTTCTGATAA+AGG | + | chr2.4:1423971-1423990 | None:intergenic | 35.0% | |
| GTCATGGTTAATGTTGGTAT+TGG | - | chr2.4:1424177-1424196 | MS.gene067430:CDS | 35.0% | |
| GTGGATACTTTGGTATTTGA+GGG | - | chr2.4:1423938-1423957 | MS.gene067430:CDS | 35.0% | |
| TATTATTGGGGCAGGAATTA+TGG | - | chr2.4:1423058-1423077 | MS.gene067430:CDS | 35.0% | |
| TTAAAAGCTGTCCAGATGTT+TGG | + | chr2.4:1424052-1424071 | None:intergenic | 35.0% | |
| TTCCTACTTTCTGATAAAGG+AGG | + | chr2.4:1423968-1423987 | None:intergenic | 35.0% | |
| TTGAACTATATCGTTCGAGT+CGG | - | chr2.4:1423857-1423876 | MS.gene067430:CDS | 35.0% | |
| TTGATAAGGATCTTGGAATC+CGG | - | chr2.4:1423822-1423841 | MS.gene067430:CDS | 35.0% | |
| ! | AGATTATCTTTTGATGAGGG+TGG | - | chr2.4:1422897-1422916 | MS.gene067430:CDS | 35.0% |
| ! | ATACCAAAGTATCCACTGTT+TGG | + | chr2.4:1423934-1423953 | None:intergenic | 35.0% |
| ! | ATGTGTAAAGCGTCATCTTA+TGG | - | chr2.4:1423191-1423210 | MS.gene067430:CDS | 35.0% |
| ! | CACTACAATTTTGTGCATCA+TGG | - | chr2.4:1423727-1423746 | MS.gene067430:CDS | 35.0% |
| ! | GGAAATTAGTGTCGAATTGT+TGG | - | chr2.4:1423154-1423173 | MS.gene067430:CDS | 35.0% |
| !! | ATCTAAGGTTGATGATGATG+AGG | - | chr2.4:1422932-1422951 | MS.gene067430:CDS | 35.0% |
| !! | GCTTGTGATTCTTGTTGTTA+TGG | - | chr2.4:1423397-1423416 | MS.gene067430:CDS | 35.0% |
| !! | TGTGATTCTTGTTGTTATGG+TGG | - | chr2.4:1423400-1423419 | MS.gene067430:CDS | 35.0% |
| !!! | TCCTGATTTTAGCTCGAAAA+AGG | - | chr2.4:1423577-1423596 | MS.gene067430:CDS | 35.0% |
| AAAGATTGATGCTCCTAGGA+TGG | - | chr2.4:1423553-1423572 | MS.gene067430:CDS | 40.0% | |
| AAAGTAGGAAGAGATCGCTA+GGG | - | chr2.4:1423978-1423997 | MS.gene067430:CDS | 40.0% | |
| AAGGAAAGATTGATGCTCCT+AGG | - | chr2.4:1423549-1423568 | MS.gene067430:CDS | 40.0% | |
| ACTACTACTATTATTGGGGC+AGG | - | chr2.4:1423050-1423069 | MS.gene067430:CDS | 40.0% | |
| ATCCCCGAATAATAGGTAAC+CGG | + | chr2.4:1423774-1423793 | None:intergenic | 40.0% | |
| ATGACAAAATCCGTTCTACG+CGG | + | chr2.4:1424162-1424181 | None:intergenic | 40.0% | |
| CACCTCCTTTATCAGAAAGT+AGG | - | chr2.4:1423963-1423982 | MS.gene067430:CDS | 40.0% | |
| CAGTATCATCCCCGAATAAT+AGG | + | chr2.4:1423781-1423800 | None:intergenic | 40.0% | |
| CATCATGGTTTATGCTGCAA+CGG | - | chr2.4:1423742-1423761 | MS.gene067430:CDS | 40.0% | |
| CCTTCAAGCTCGTTGTATAT+CGG | + | chr2.4:1423671-1423690 | None:intergenic | 40.0% | |
| CTAAAATCAGGAACCATCCT+AGG | + | chr2.4:1423569-1423588 | None:intergenic | 40.0% | |
| CTGTCCGGTTACCTATTATT+CGG | - | chr2.4:1423767-1423786 | MS.gene067430:CDS | 40.0% | |
| GACTCGAACGATATAGTTCA+AGG | + | chr2.4:1423858-1423877 | None:intergenic | 40.0% | |
| GAGGTTGTTCAACATGCTAT+GGG | - | chr2.4:1423215-1423234 | MS.gene067430:CDS | 40.0% | |
| GTACCATGATTCCAAACATC+TGG | - | chr2.4:1424038-1424057 | MS.gene067430:CDS | 40.0% | |
| GTCAAATTAAACACAGCACC+AGG | + | chr2.4:1423032-1423051 | None:intergenic | 40.0% | |
| GTTAGCATTGTAGGAGTTGT+CGG | - | chr2.4:1424208-1424227 | MS.gene067430:CDS | 40.0% | |
| GTTGGTCCTATTCCAAATCA+CGG | - | chr2.4:1422996-1423015 | MS.gene067430:CDS | 40.0% | |
| TAAGTTCACAGGTGCAACAA+CGG | - | chr2.4:1424069-1424088 | MS.gene067430:CDS | 40.0% | |
| TAGCTCGAAAAAGGCTATCT+TGG | - | chr2.4:1423586-1423605 | MS.gene067430:CDS | 40.0% | |
| TATACAACGAGCTTGAAGGT+AGG | - | chr2.4:1423672-1423691 | MS.gene067430:CDS | 40.0% | |
| TCTTGGAATCCGGTTTAGTT+CGG | - | chr2.4:1423832-1423851 | MS.gene067430:CDS | 40.0% | |
| TGAGGTTGTTCAACATGCTA+TGG | - | chr2.4:1423214-1423233 | MS.gene067430:CDS | 40.0% | |
| TGTCCGGTTACCTATTATTC+GGG | - | chr2.4:1423768-1423787 | MS.gene067430:CDS | 40.0% | |
| TTGGTCCTATTCCAAATCAC+GGG | - | chr2.4:1422997-1423016 | MS.gene067430:CDS | 40.0% | |
| TTGTTCAACATGCTATGGGT+AGG | - | chr2.4:1423219-1423238 | MS.gene067430:CDS | 40.0% | |
| ! | AGGGGTTTTTGATCAGTTGA+TGG | - | chr2.4:1423349-1423368 | MS.gene067430:CDS | 40.0% |
| ! | ATAATGGGGGATGTTATGTC+CGG | - | chr2.4:1423311-1423330 | MS.gene067430:CDS | 40.0% |
| ! | GGGGTTTTTGATCAGTTGAT+GGG | - | chr2.4:1423350-1423369 | MS.gene067430:CDS | 40.0% |
| ! | TAAAGCGTCATCTTATGGTG+AGG | - | chr2.4:1423196-1423215 | MS.gene067430:CDS | 40.0% |
| ! | TATCTTTTGATGAGGGTGGT+GGG | - | chr2.4:1422901-1422920 | MS.gene067430:CDS | 40.0% |
| ! | TGTCCAGATGTTTGGAATCA+TGG | + | chr2.4:1424044-1424063 | None:intergenic | 40.0% |
| ! | TTAGTGTCGAATTGTTGGTG+AGG | - | chr2.4:1423159-1423178 | MS.gene067430:CDS | 40.0% |
| ! | TTATCTTTTGATGAGGGTGG+TGG | - | chr2.4:1422900-1422919 | MS.gene067430:CDS | 40.0% |
| !! | GGGTTTTTGATCAGTTGATG+GGG | - | chr2.4:1423351-1423370 | MS.gene067430:CDS | 40.0% |
| !! | TAAGGTTGATGATGATGAGG+AGG | - | chr2.4:1422935-1422954 | MS.gene067430:CDS | 40.0% |
| !! | TTGATCAGTTGATGGGGAAT+GGG | - | chr2.4:1423357-1423376 | MS.gene067430:CDS | 40.0% |
| !! | TTTGATCAGTTGATGGGGAA+TGG | - | chr2.4:1423356-1423375 | MS.gene067430:CDS | 40.0% |
| !!! | GCCTTTTTCGAGCTAAAATC+AGG | + | chr2.4:1423581-1423600 | None:intergenic | 40.0% |
| !!! | TGGACAGCTTTTAAGTTCAC+AGG | - | chr2.4:1424058-1424077 | MS.gene067430:CDS | 40.0% |
| !!! | TGGTGGGTTTTTAGGATCTA+AGG | - | chr2.4:1422917-1422936 | MS.gene067430:CDS | 40.0% |
| ACGCCAAACAGTGGATACTT+TGG | - | chr2.4:1423928-1423947 | MS.gene067430:CDS | 45.0% | |
| AGAAGATGAACCGAGTAGGA+AGG | - | chr2.4:1423702-1423721 | MS.gene067430:CDS | 45.0% | |
| AGTTCAAGGCCGAACTAAAC+CGG | + | chr2.4:1423844-1423863 | None:intergenic | 45.0% | |
| CCAAGAACTTTCATGGTAGC+AGG | + | chr2.4:1423089-1423108 | None:intergenic | 45.0% | |
| CCCTAAATGATGAACCGAAC+CGG | + | chr2.4:1423333-1423352 | None:intergenic | 45.0% | |
| CCGATATACAACGAGCTTGA+AGG | - | chr2.4:1423668-1423687 | MS.gene067430:CDS | 45.0% | |
| CCTGCTACCATGAAAGTTCT+TGG | - | chr2.4:1423086-1423105 | MS.gene067430:CDS | 45.0% | |
| GAAAGTAGGAAGAGATCGCT+AGG | - | chr2.4:1423977-1423996 | MS.gene067430:CDS | 45.0% | |
| GAAGATGAACCGAGTAGGAA+GGG | - | chr2.4:1423703-1423722 | MS.gene067430:CDS | 45.0% | |
| GCTGTGACTGTTAGCATTGT+AGG | - | chr2.4:1424199-1424218 | MS.gene067430:CDS | 45.0% | |
| GGAATAGGACCAACAACAAG+AGG | + | chr2.4:1422990-1423009 | None:intergenic | 45.0% | |
| GTCCGGTTACCTATTATTCG+GGG | - | chr2.4:1423769-1423788 | MS.gene067430:CDS | 45.0% | |
| TGTCGGCAATGTCTATAGCA+TGG | - | chr2.4:1424225-1424244 | MS.gene067430:CDS | 45.0% | |
| TTGTAGTGACCCTTCCTACT+CGG | + | chr2.4:1423715-1423734 | None:intergenic | 45.0% | |
| TTTCTCACTACGCCAAACAG+TGG | - | chr2.4:1423919-1423938 | MS.gene067430:CDS | 45.0% | |
| !! | CCGGTTCGGTTCATCATTTA+GGG | - | chr2.4:1423330-1423349 | MS.gene067430:CDS | 45.0% |
| !! | CGGTTCGGTTCATCATTTAG+GGG | - | chr2.4:1423331-1423350 | MS.gene067430:CDS | 45.0% |
| !! | GCGTAGAACGGATTTTGTCA+TGG | - | chr2.4:1424161-1424180 | MS.gene067430:CDS | 45.0% |
| !! | TCCGGTTCGGTTCATCATTT+AGG | - | chr2.4:1423329-1423348 | MS.gene067430:CDS | 45.0% |
| !! | TGATCAGTTGATGGGGAATG+GGG | - | chr2.4:1423358-1423377 | MS.gene067430:CDS | 45.0% |
| AGGGCTGACTGCAATTCTGT+TGG | - | chr2.4:1423997-1424016 | MS.gene067430:CDS | 50.0% | |
| CCTACTCGGTTCATCTTCTG+CGG | + | chr2.4:1423701-1423720 | None:intergenic | 50.0% | |
| CCTATTCCAAATCACGGGTC+TGG | - | chr2.4:1423002-1423021 | MS.gene067430:CDS | 50.0% | |
| GAGATTTGAGCCGCGTAGAA+CGG | - | chr2.4:1424149-1424168 | MS.gene067430:CDS | 50.0% | |
| GAGCTTGACTTCAGCTGCAT+CGG | - | chr2.4:1423466-1423485 | MS.gene067430:CDS | 50.0% | |
| ! | CCAGACCCGTGATTTGGAAT+AGG | + | chr2.4:1423005-1423024 | None:intergenic | 50.0% |
| ! | GCAACAACGGCTGTTTCGTT+AGG | - | chr2.4:1424082-1424101 | MS.gene067430:CDS | 50.0% |
| ! | GTTGATGGGGAATGGGGTTT+GGG | - | chr2.4:1423364-1423383 | MS.gene067430:CDS | 50.0% |
| !! | AGTTGATGGGGAATGGGGTT+TGG | - | chr2.4:1423363-1423382 | MS.gene067430:CDS | 50.0% |
| !!! | GATGAGGGTGGTGGGTTTTT+AGG | - | chr2.4:1422909-1422928 | MS.gene067430:CDS | 50.0% |
| AATCACGGGTCTGGTGTACC+TGG | - | chr2.4:1423011-1423030 | MS.gene067430:CDS | 55.0% | |
| ATGCTATGGGTAGGCCTGCT+AGG | - | chr2.4:1423228-1423247 | MS.gene067430:CDS | 55.0% | |
| CCGCAGAAGATGAACCGAGT+AGG | - | chr2.4:1423698-1423717 | MS.gene067430:CDS | 55.0% | |
| CTTGACTTCAGCTGCATCGG+TGG | - | chr2.4:1423469-1423488 | MS.gene067430:CDS | 55.0% | |
| GGGGGATGTTATGTCCGGTT+CGG | - | chr2.4:1423316-1423335 | MS.gene067430:CDS | 55.0% | |
| GGTACACCAGACCCGTGATT+TGG | + | chr2.4:1423011-1423030 | None:intergenic | 55.0% | |
| TATGCTGCAACGGCACTGTC+CGG | - | chr2.4:1423752-1423771 | MS.gene067430:CDS | 55.0% | |
| ! | GGAATGGGGTTTGGGATCAG+AGG | - | chr2.4:1423372-1423391 | MS.gene067430:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 1422798 | 1424261 | 1422798 | ID=MS.gene067430 |
| chr2.4 | mRNA | 1422798 | 1424261 | 1422798 | ID=MS.gene067430.t1;Parent=MS.gene067430 |
| chr2.4 | exon | 1422798 | 1424261 | 1422798 | ID=MS.gene067430.t1.exon1;Parent=MS.gene067430.t1 |
| chr2.4 | CDS | 1422798 | 1424261 | 1422798 | ID=cds.MS.gene067430.t1;Parent=MS.gene067430.t1 |
| Gene Sequence |
| Protein sequence |
