Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018235.t1 | XP_013451155.1 | 97 | 463 | 14 | 0 | 1 | 463 | 1 | 463 | 6.60E-245 | 856.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018235.t1 | F4KBM7 | 62.8 | 443 | 162 | 2 | 20 | 460 | 8 | 449 | 5.4e-155 | 548.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018235.t1 | A0A072UHC3 | 97.0 | 463 | 14 | 0 | 1 | 463 | 1 | 463 | 4.8e-245 | 856.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018235 | MS.gene067430 | PPI |
| MS.gene018235 | MS.gene022024 | PPI |
| MS.gene018235 | MS.gene75991 | PPI |
| MS.gene018235 | MS.gene37165 | PPI |
| MS.gene018235 | MS.gene37173 | PPI |
| MS.gene018235 | MS.gene018234 | PPI |
| MS.gene018235 | MS.gene31156 | PPI |
| MS.gene018235 | MS.gene44762 | PPI |
| MS.gene018235 | MS.gene62008 | PPI |
| MS.gene018235 | MS.gene41176 | PPI |
| MS.gene018235 | MS.gene86947 | PPI |
| MS.gene018235 | MS.gene018243 | PPI |
| MS.gene018235 | MS.gene83556 | PPI |
| MS.gene018235 | MS.gene37166 | PPI |
| MS.gene018235 | MS.gene052122 | PPI |
| MS.gene018235 | MS.gene45489 | PPI |
| MS.gene018235 | MS.gene004045 | PPI |
| MS.gene018235 | MS.gene071169 | PPI |
| MS.gene018235 | MS.gene86432 | PPI |
| MS.gene021114 | MS.gene018235 | PPI |
| MS.gene018235 | MS.gene30955 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018235.t1 | MTR_6g016270 | 96.976 | 463 | 14 | 0 | 1 | 463 | 1 | 463 | 0.0 | 899 |
| MS.gene018235.t1 | MTR_6g016295 | 86.313 | 453 | 62 | 0 | 9 | 461 | 4 | 456 | 0.0 | 774 |
| MS.gene018235.t1 | MTR_6g016245 | 85.011 | 447 | 67 | 0 | 16 | 462 | 9 | 455 | 0.0 | 755 |
| MS.gene018235.t1 | MTR_6g016275 | 80.736 | 462 | 86 | 2 | 1 | 462 | 1 | 459 | 0.0 | 733 |
| MS.gene018235.t1 | MTR_7g017630 | 72.903 | 465 | 123 | 2 | 1 | 463 | 1 | 464 | 0.0 | 692 |
| MS.gene018235.t1 | MTR_5g083760 | 44.651 | 430 | 232 | 3 | 29 | 453 | 11 | 439 | 3.82e-127 | 376 |
| MS.gene018235.t1 | MTR_5g083770 | 43.692 | 428 | 232 | 3 | 27 | 453 | 5 | 424 | 3.63e-122 | 363 |
| MS.gene018235.t1 | MTR_3g072110 | 43.269 | 416 | 233 | 2 | 48 | 462 | 25 | 438 | 2.76e-119 | 356 |
| MS.gene018235.t1 | MTR_6g016245 | 85.354 | 198 | 29 | 0 | 265 | 462 | 190 | 387 | 7.03e-114 | 341 |
| MS.gene018235.t1 | MTR_6g016245 | 83.978 | 181 | 29 | 0 | 16 | 196 | 9 | 189 | 3.89e-109 | 328 |
| MS.gene018235.t1 | MTR_2g104180 | 43.095 | 420 | 231 | 4 | 45 | 461 | 73 | 487 | 5.43e-113 | 342 |
| MS.gene018235.t1 | MTR_6g024240 | 68.030 | 269 | 31 | 2 | 194 | 462 | 38 | 251 | 6.42e-105 | 312 |
| MS.gene018235.t1 | MTR_1396s0010 | 57.895 | 266 | 90 | 2 | 198 | 463 | 1 | 244 | 2.50e-103 | 308 |
| MS.gene018235.t1 | MTR_1396s0010 | 61.692 | 201 | 76 | 1 | 178 | 378 | 1 | 200 | 1.53e-82 | 253 |
| MS.gene018235.t1 | MTR_8g065630 | 50.265 | 189 | 89 | 1 | 14 | 202 | 23 | 206 | 4.09e-54 | 181 |
| MS.gene018235.t1 | MTR_8g065650 | 51.892 | 185 | 84 | 1 | 14 | 198 | 23 | 202 | 3.85e-51 | 183 |
| MS.gene018235.t1 | MTR_0658s0030 | 58.537 | 123 | 50 | 1 | 341 | 463 | 1 | 122 | 3.37e-43 | 149 |
| MS.gene018235.t1 | MTR_3g072105 | 42.529 | 87 | 50 | 0 | 48 | 134 | 23 | 109 | 2.45e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018235.t1 | AT5G38820 | 62.613 | 444 | 163 | 2 | 20 | 461 | 13 | 455 | 0.0 | 579 |
| MS.gene018235.t1 | AT5G38820 | 62.613 | 444 | 163 | 2 | 20 | 461 | 8 | 450 | 0.0 | 579 |
| MS.gene018235.t1 | AT5G38820 | 62.613 | 444 | 163 | 2 | 20 | 461 | 8 | 450 | 0.0 | 579 |
| MS.gene018235.t1 | AT3G30390 | 63.616 | 437 | 158 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| MS.gene018235.t1 | AT3G30390 | 63.616 | 437 | 158 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| MS.gene018235.t1 | AT3G30390 | 63.616 | 437 | 158 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| MS.gene018235.t1 | AT3G56200 | 42.657 | 429 | 240 | 3 | 30 | 457 | 9 | 432 | 3.72e-114 | 343 |
| MS.gene018235.t1 | AT2G40420 | 43.836 | 438 | 242 | 4 | 27 | 463 | 6 | 440 | 2.48e-111 | 336 |
| MS.gene018235.t1 | AT1G80510 | 39.627 | 482 | 244 | 7 | 14 | 462 | 22 | 489 | 7.49e-102 | 313 |
| MS.gene018235.t1 | AT2G41190 | 23.326 | 463 | 299 | 12 | 24 | 462 | 106 | 536 | 4.26e-14 | 74.7 |
Find 100 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGGTTCCTTCTATT+TGG | 0.167128 | 6.3:+11486025 | MS.gene018235:CDS |
| ATTGTAGGTGATGTGATTTC+TGG | 0.204897 | 6.3:+11483811 | MS.gene018235:intron |
| TTCTTCCTATGGAAGTCTTA+TGG | 0.207163 | 6.3:+11483572 | MS.gene018235:CDS |
| AATTTGTCCACCACAGTTAT+TGG | 0.221850 | 6.3:+11483414 | MS.gene018235:CDS |
| TCCAAAATCAGTATCAAAAT+TGG | 0.255928 | 6.3:-11486074 | None:intergenic |
| TACATACTGACAAGCTTCTT+TGG | 0.256943 | 6.3:+11486010 | MS.gene018235:CDS |
| CAATAATGCTGTTAGGATTA+TGG | 0.274763 | 6.3:-11483499 | None:intergenic |
| ACTTGCTGTGTTTGGACCTT+TGG | 0.275914 | 6.3:+11483930 | MS.gene018235:CDS |
| CAAATTTCATACCCAGCATT+TGG | 0.286363 | 6.3:+11486299 | MS.gene018235:CDS |
| TCTTCCTATGGAAGTCTTAT+GGG | 0.289755 | 6.3:+11483573 | MS.gene018235:CDS |
| ATTGTTTACATGATCATTAT+TGG | 0.304311 | 6.3:+11483666 | MS.gene018235:CDS |
| TCCACCACAGTTATTGGTGC+TGG | 0.320758 | 6.3:+11483420 | MS.gene018235:CDS |
| TTTACAACACTTGCTGTGTT+TGG | 0.329895 | 6.3:+11483922 | MS.gene018235:CDS |
| TTTAATGGAGCTTCATTTCC+TGG | 0.343179 | 6.3:+11483381 | MS.gene018235:CDS |
| TTTGGTGTCCATTGGTGGAC+TGG | 0.358328 | 6.3:+11483880 | MS.gene018235:CDS |
| TTCCAGTTCTCTGGAGCAAC+AGG | 0.363246 | 6.3:+11486328 | MS.gene018235:CDS |
| GAATCTACATCAGTAATGAT+AGG | 0.372014 | 6.3:-11485432 | None:intergenic |
| TTCACATCTGCATTATCAAT+TGG | 0.372056 | 6.3:+11485324 | MS.gene018235:CDS |
| TCAATTATCAAGATTATTAG+TGG | 0.372252 | 6.3:+11485384 | MS.gene018235:CDS |
| AGTTATTGGTGCTGGGATCA+TGG | 0.376122 | 6.3:+11483428 | MS.gene018235:CDS |
| AGTCTTATGGGAGATACCTT+TGG | 0.377085 | 6.3:+11483585 | MS.gene018235:CDS |
| ACATACTGACAAGCTTCTTT+GGG | 0.380094 | 6.3:+11486011 | MS.gene018235:CDS |
| TCTCTGTCAATAATGCTGTT+AGG | 0.389276 | 6.3:-11483506 | None:intergenic |
| CACCTGTTGCTCCAGAGAAC+TGG | 0.391056 | 6.3:-11486330 | None:intergenic |
| GTCTTATGGGAGATACCTTT+GGG | 0.394756 | 6.3:+11483586 | MS.gene018235:CDS |
| GTGATTTCTGGAACAACTTC+AGG | 0.398618 | 6.3:+11483823 | MS.gene018235:CDS |
| TCAATTACTATTGCCCTTGT+TGG | 0.399975 | 6.3:+11486259 | MS.gene018235:CDS |
| TTGGTCAGCTTAAAGCGAAT+TGG | 0.402046 | 6.3:+11483949 | MS.gene018235:CDS |
| TTGGTGTCCATTGGTGGACT+GGG | 0.404638 | 6.3:+11483881 | MS.gene018235:CDS |
| AAATTTCATACCCAGCATTT+GGG | 0.404719 | 6.3:+11486300 | MS.gene018235:CDS |
| TTCCAGCTGCAATCACTTTG+AGG | 0.404901 | 6.3:+11486374 | MS.gene018235:CDS |
| TGAAAGCTGAAAATGACAAT+TGG | 0.405116 | 6.3:+11483240 | None:intergenic |
| GCATTAGCTACAAGAGCATC+AGG | 0.419568 | 6.3:-11483273 | None:intergenic |
| CTTGTTGGCACTATCTTCCT+CGG | 0.424244 | 6.3:+11486274 | MS.gene018235:CDS |
| TTGTTGGCACTATCTTCCTC+GGG | 0.434972 | 6.3:+11486275 | MS.gene018235:CDS |
| GCAGGGAATCTTTCTTCCTA+TGG | 0.437556 | 6.3:+11483561 | MS.gene018235:CDS |
| GGAGATACCTTTGGGAAATA+CGG | 0.437934 | 6.3:+11483594 | MS.gene018235:CDS |
| CATCATCCTGGTATCCTTGA+AGG | 0.443854 | 6.3:+11483853 | MS.gene018235:CDS |
| AGTAATGATAGGGAAGAGTC+TGG | 0.449295 | 6.3:-11485421 | None:intergenic |
| AGGCAATTGAATTCATGATC+AGG | 0.452010 | 6.3:+11483529 | MS.gene018235:CDS |
| GAGTTCCTTCACCAAATAGA+AGG | 0.452164 | 6.3:-11486036 | None:intergenic |
| GTTATTGGTGCTGGGATCAT+GGG | 0.455926 | 6.3:+11483429 | MS.gene018235:CDS |
| CCATCTGTTTCTTGACACTT+AGG | 0.461672 | 6.3:-11483345 | None:intergenic |
| GGTATCCTTGAAGGATGGTT+TGG | 0.466861 | 6.3:+11483862 | MS.gene018235:CDS |
| CTGGAAAATAACCCAAATGC+TGG | 0.474691 | 6.3:-11486311 | None:intergenic |
| GGGTTCCTTCTATTTGGTGA+AGG | 0.475952 | 6.3:+11486031 | MS.gene018235:CDS |
| AAGGATGGTTTGGTGTCCAT+TGG | 0.478302 | 6.3:+11483872 | MS.gene018235:CDS |
| AAGATTATTAGTGGAAGCAT+TGG | 0.480946 | 6.3:+11485393 | MS.gene018235:CDS |
| GCTACAAGAGCATCAGGTGC+AGG | 0.481251 | 6.3:-11483267 | None:intergenic |
| CACCTCAAAGTGATTGCAGC+TGG | 0.481278 | 6.3:-11486376 | None:intergenic |
| CCACCACAGTTATTGGTGCT+GGG | 0.481742 | 6.3:+11483421 | MS.gene018235:CDS |
| GATGGTTTGGTGTCCATTGG+TGG | 0.485337 | 6.3:+11483875 | MS.gene018235:CDS |
| TTAATGGAGCTTCATTTCCT+GGG | 0.487705 | 6.3:+11483382 | MS.gene018235:CDS |
| AGATTATTAGTGGAAGCATT+GGG | 0.491513 | 6.3:+11485394 | MS.gene018235:CDS |
| TCATAACATTGATAATGAAC+TGG | 0.495103 | 6.3:+11485928 | MS.gene018235:CDS |
| TTCTGCTTTGATCAACAAGA+AGG | 0.498521 | 6.3:+11488250 | MS.gene018235:CDS |
| CTCAATGCATAGAAAACTAC+AGG | 0.499017 | 6.3:-11486166 | None:intergenic |
| GAGGATTCCTCACGGATGCG+TGG | 0.508056 | 6.3:+11485950 | MS.gene018235:CDS |
| GCATTGAGGGTCAACATAGA+TGG | 0.513114 | 6.3:+11486181 | MS.gene018235:CDS |
| AGGATTCCTCACGGATGCGT+GGG | 0.514657 | 6.3:+11485951 | MS.gene018235:CDS |
| GGACACCAAACCATCCTTCA+AGG | 0.515087 | 6.3:-11483867 | None:intergenic |
| AAACCGCCATCACTATCATA+AGG | 0.536193 | 6.3:-11488196 | None:intergenic |
| ATACTGAAGAGCATAGAGTA+AGG | 0.543549 | 6.3:-11485988 | None:intergenic |
| CGAGGAAGATAGTGCCAACA+AGG | 0.546384 | 6.3:-11486273 | None:intergenic |
| AGGATTATGGCAAGAAGACC+AGG | 0.549978 | 6.3:-11483486 | None:intergenic |
| AATCTACATCAGTAATGATA+GGG | 0.551706 | 6.3:-11485431 | None:intergenic |
| GACAAATTGAAAACAGCCCC+AGG | 0.556593 | 6.3:-11483399 | None:intergenic |
| CTGAAGTTATCAACAATCAA+AGG | 0.557272 | 6.3:-11486229 | None:intergenic |
| AATCAAAGGCCTTCTTGATG+AGG | 0.564180 | 6.3:-11486215 | None:intergenic |
| TCATTAAGAGCAGAACCAAA+AGG | 0.570302 | 6.3:-11486100 | None:intergenic |
| ATGTGCGCCCAGTCCACCAA+TGG | 0.574258 | 6.3:-11483888 | None:intergenic |
| ATCTCCCATAAGACTTCCAT+AGG | 0.579026 | 6.3:-11483577 | None:intergenic |
| TGTCATCAGCACAGGAACTA+CGG | 0.580206 | 6.3:-11485472 | None:intergenic |
| AACCATCCTTCAAGGATACC+AGG | 0.580545 | 6.3:-11483859 | None:intergenic |
| ATCCTGGTATCCTTGAAGGA+TGG | 0.581223 | 6.3:+11483857 | MS.gene018235:CDS |
| TCAGGTGGAATACATCATCC+TGG | 0.581292 | 6.3:+11483841 | MS.gene018235:CDS |
| GTCTGTCCTTATGATAGTGA+TGG | 0.589607 | 6.3:+11488190 | MS.gene018235:CDS |
| ATTTCTGGAACAACTTCAGG+TGG | 0.590530 | 6.3:+11483826 | MS.gene018235:CDS |
| TGGAAAATAACCCAAATGCT+GGG | 0.594278 | 6.3:-11486310 | None:intergenic |
| TCTTGACACTTAGGTAACAA+AGG | 0.596273 | 6.3:-11483336 | None:intergenic |
| TACTGAAGAGCATAGAGTAA+GGG | 0.597984 | 6.3:-11485987 | None:intergenic |
| TAATGGAGCTTCATTTCCTG+GGG | 0.598538 | 6.3:+11483383 | MS.gene018235:CDS |
| TGGGAAATACGGAAAAGCAC+TGG | 0.598996 | 6.3:+11483605 | MS.gene018235:CDS |
| AACAGCATTATTGACAGAGA+AGG | 0.601333 | 6.3:+11483509 | MS.gene018235:CDS |
| TAACATTGATAATGAACTGG+AGG | 0.604897 | 6.3:+11485931 | MS.gene018235:CDS |
| ATATAAGCTGTCATCAGCAC+AGG | 0.613100 | 6.3:-11485480 | None:intergenic |
| CCCAGCACCAATAACTGTGG+TGG | 0.618929 | 6.3:-11483421 | None:intergenic |
| GCTTATATCTGTCACTACAA+TGG | 0.622057 | 6.3:+11485495 | MS.gene018235:CDS |
| ATTCGCTTTAAGCTGACCAA+AGG | 0.630059 | 6.3:-11483946 | None:intergenic |
| CCTAAGTGTCAAGAAACAGA+TGG | 0.641175 | 6.3:+11483345 | MS.gene018235:CDS |
| GTAATGATAGGGAAGAGTCT+GGG | 0.650937 | 6.3:-11485420 | None:intergenic |
| GGATTCCTCACGGATGCGTG+GGG | 0.652593 | 6.3:+11485952 | MS.gene018235:CDS |
| TGTGTTATAATCACTAACGT+TGG | 0.671440 | 6.3:+11483636 | MS.gene018235:CDS |
| TGTTGGCACTATCTTCCTCG+GGG | 0.677077 | 6.3:+11486276 | MS.gene018235:CDS |
| ATGAACTGGAGGATTCCTCA+CGG | 0.679968 | 6.3:+11485942 | MS.gene018235:CDS |
| CACAACCCCACGCATCCGTG+AGG | 0.689700 | 6.3:-11485957 | None:intergenic |
| TGTCCTTATGATAGTGATGG+CGG | 0.689703 | 6.3:+11488193 | MS.gene018235:CDS |
| GAGGAAGATAGTGCCAACAA+GGG | 0.710864 | 6.3:-11486272 | None:intergenic |
| GATCCCAGCACCAATAACTG+TGG | 0.717106 | 6.3:-11483424 | None:intergenic |
| TGGGTATGAAATTTGCCCCG+AGG | 0.735253 | 6.3:-11486291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAATAAATAAATAA+TGG | + | chr6.3:11484719-11484738 | MS.gene018235:intron | 0.0% |
| !! | AAATAAATATTATTCTTGAA+TGG | + | chr6.3:11486967-11486986 | MS.gene018235:intron | 10.0% |
| !! | TATCTTTAAATTTAATATGT+TGG | + | chr6.3:11487618-11487637 | MS.gene018235:intron | 10.0% |
| !! | TATTTGTAAATTGAAAAAAA+TGG | + | chr6.3:11484079-11484098 | MS.gene018235:intron | 10.0% |
| !! | TTATATAATTGATATTAACA+CGG | + | chr6.3:11486505-11486524 | MS.gene018235:intron | 10.0% |
| !!! | CTAATAAATTATAACTTTTT+AGG | - | chr6.3:11487582-11487601 | None:intergenic | 10.0% |
| !!! | TCAAGAATAATATTTATTTT+GGG | - | chr6.3:11486966-11486985 | None:intergenic | 10.0% |
| !!! | TTCAAGAATAATATTTATTT+TGG | - | chr6.3:11486967-11486986 | None:intergenic | 10.0% |
| !! | ACCTATACTTATTATATATT+TGG | + | chr6.3:11484950-11484969 | MS.gene018235:intron | 15.0% |
| !! | ATAAAAATTTGATTGATATC+AGG | + | chr6.3:11486902-11486921 | MS.gene018235:intron | 15.0% |
| !! | CCTATACTTATTATATATTT+GGG | + | chr6.3:11484951-11484970 | MS.gene018235:intron | 15.0% |
| !! | CTATACTTATTATATATTTG+GGG | + | chr6.3:11484952-11484971 | MS.gene018235:intron | 15.0% |
| !! | GTAAAAAATAAATTGAAACA+TGG | + | chr6.3:11486482-11486501 | MS.gene018235:intron | 15.0% |
| !! | TAAAAATTTGATTGATATCA+GGG | + | chr6.3:11486903-11486922 | MS.gene018235:intron | 15.0% |
| !! | TATACTTATTATATATTTGG+GGG | + | chr6.3:11484953-11484972 | MS.gene018235:intron | 15.0% |
| !! | TCAATTTACAAATAATGAAA+TGG | - | chr6.3:11484073-11484092 | None:intergenic | 15.0% |
| !! | TTGTATATTTATATCGATAT+TGG | - | chr6.3:11486821-11486840 | None:intergenic | 15.0% |
| !!! | AGATTATTTTAGTTAATTTC+TGG | + | chr6.3:11485803-11485822 | MS.gene018235:intron | 15.0% |
| !!! | CAAGAATAATATTTATTTTG+GGG | - | chr6.3:11486965-11486984 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTAAGATTAAATT+TGG | + | chr6.3:11487393-11487412 | MS.gene018235:intron | 15.0% |
| !!! | TAGATGAAATATTAGTTTAT+AGG | - | chr6.3:11486633-11486652 | None:intergenic | 15.0% |
| !!! | TTCAACAATTAAATTTGTTT+GGG | - | chr6.3:11487019-11487038 | None:intergenic | 15.0% |
| !!! | TTTCAACAATTAAATTTGTT+TGG | - | chr6.3:11487020-11487039 | None:intergenic | 15.0% |
| !! | AAAAATTTGATTGATATCAG+GGG | + | chr6.3:11486904-11486923 | MS.gene018235:intron | 20.0% |
| !! | AATTTCGATAACAACAAATT+AGG | - | chr6.3:11487483-11487502 | None:intergenic | 20.0% |
| !! | AGAAAAATAGAGATATCATA+TGG | + | chr6.3:11484153-11484172 | MS.gene018235:intron | 20.0% |
| !! | ATAAGCTATTTAGAAAAGTT+GGG | - | chr6.3:11487293-11487312 | None:intergenic | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | - | chr6.3:11484358-11484377 | None:intergenic | 20.0% |
| !! | ATATATTAGATGACAATGTT+AGG | + | chr6.3:11484009-11484028 | MS.gene018235:intron | 20.0% |
| !! | ATTGTTTACATGATCATTAT+TGG | + | chr6.3:11483666-11483685 | MS.gene018235:CDS | 20.0% |
| !! | ATTTCGATAACAACAAATTA+GGG | - | chr6.3:11487482-11487501 | None:intergenic | 20.0% |
| !! | CCCAAATATATAATAAGTAT+AGG | - | chr6.3:11484954-11484973 | None:intergenic | 20.0% |
| !! | TAAATCCAATGATAAAAAAG+TGG | + | chr6.3:11486679-11486698 | MS.gene018235:intron | 20.0% |
| !! | TAACATTGTCATCTAATATA+TGG | - | chr6.3:11484010-11484029 | None:intergenic | 20.0% |
| !! | TAGTATTTACCAAATAAAGT+AGG | - | chr6.3:11487814-11487833 | None:intergenic | 20.0% |
| !! | TCAATTATCAAGATTATTAG+TGG | + | chr6.3:11485384-11485403 | MS.gene018235:CDS | 20.0% |
| !! | TGATTGATATACTTCATTAT+AGG | + | chr6.3:11487723-11487742 | MS.gene018235:intron | 20.0% |
| !! | TTAAATTTGGATTTAATCTC+TGG | + | chr6.3:11487406-11487425 | MS.gene018235:intron | 20.0% |
| !! | TTAACATTAAACAAAACCTT+AGG | - | chr6.3:11487458-11487477 | None:intergenic | 20.0% |
| !! | TTTATTTGGTAAATACTAAC+TGG | + | chr6.3:11487816-11487835 | MS.gene018235:intron | 20.0% |
| !! | TTTGATCATAAAACTTAAGA+TGG | - | chr6.3:11484202-11484221 | None:intergenic | 20.0% |
| !!! | ACTAAAATTTGTTTACTTCA+TGG | + | chr6.3:11485854-11485873 | MS.gene018235:intron | 20.0% |
| !!! | ATCTGAATTTCTATTGTTTT+AGG | - | chr6.3:11485787-11485806 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTTAAGTTCCTA+AGG | + | chr6.3:11487439-11487458 | MS.gene018235:intron | 20.0% |
| !!! | TCAACAATTAAATTTGTTTG+GGG | - | chr6.3:11487018-11487037 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTGTTAACATGT+TGG | + | chr6.3:11487371-11487390 | MS.gene018235:intron | 20.0% |
| ! | AACATTACATAATCGATTGT+TGG | - | chr6.3:11484817-11484836 | None:intergenic | 25.0% |
| ! | AATCTACATCAGTAATGATA+GGG | - | chr6.3:11485434-11485453 | None:intergenic | 25.0% |
| ! | ACTTGGGTAAAAATATGAAA+GGG | - | chr6.3:11485118-11485137 | None:intergenic | 25.0% |
| ! | AGTGATTCATTCTAATGAAT+CGG | + | chr6.3:11486755-11486774 | MS.gene018235:intron | 25.0% |
| ! | ATCTAATGTTCTAATCTACT+TGG | - | chr6.3:11485135-11485154 | None:intergenic | 25.0% |
| ! | CACATAATTCTTGTAATCAA+GGG | - | chr6.3:11484623-11484642 | None:intergenic | 25.0% |
| ! | GAGCAAAAACATTAAAACAA+GGG | - | chr6.3:11485558-11485577 | None:intergenic | 25.0% |
| ! | GATAAGCTATTTAGAAAAGT+TGG | - | chr6.3:11487294-11487313 | None:intergenic | 25.0% |
| ! | GTAAAAATTTGCGACAAAAT+TGG | + | chr6.3:11487532-11487551 | MS.gene018235:intron | 25.0% |
| ! | GTATGAAGTTTCAAAGTAAT+AGG | - | chr6.3:11484677-11484696 | None:intergenic | 25.0% |
| ! | TAATCAACTAAAACAGAAAC+TGG | - | chr6.3:11483728-11483747 | None:intergenic | 25.0% |
| ! | TAATGAAGTATATCAATCAG+CGG | - | chr6.3:11487722-11487741 | None:intergenic | 25.0% |
| ! | TACTTAAGAGAAGAGAAAAA+GGG | - | chr6.3:11488047-11488066 | None:intergenic | 25.0% |
| ! | TACTTGGGTAAAAATATGAA+AGG | - | chr6.3:11485119-11485138 | None:intergenic | 25.0% |
| ! | TATAGAAAAACTGCAGAAAA+TGG | + | chr6.3:11487863-11487882 | MS.gene018235:intron | 25.0% |
| ! | TCACATAATTCTTGTAATCA+AGG | - | chr6.3:11484624-11484643 | None:intergenic | 25.0% |
| ! | TCATAAAACTTAAGATGGAA+TGG | - | chr6.3:11484197-11484216 | None:intergenic | 25.0% |
| ! | TCCAAAATCAGTATCAAAAT+TGG | - | chr6.3:11486077-11486096 | None:intergenic | 25.0% |
| ! | TCTAATGTTCTAATCTACTT+GGG | - | chr6.3:11485134-11485153 | None:intergenic | 25.0% |
| ! | TTACAAGAATTATGTGACTA+TGG | + | chr6.3:11484627-11484646 | MS.gene018235:intron | 25.0% |
| ! | TTATAAAAAGTTGACATGCA+TGG | - | chr6.3:11485699-11485718 | None:intergenic | 25.0% |
| !! | CTTTTCAAATTAGTTGGAAA+TGG | - | chr6.3:11485673-11485692 | None:intergenic | 25.0% |
| !! | GGTGATTTTCATGAATTTAA+TGG | + | chr6.3:11483366-11483385 | MS.gene018235:CDS | 25.0% |
| !! | TCTGCAGTTTTTCTATATAA+TGG | - | chr6.3:11487860-11487879 | None:intergenic | 25.0% |
| !! | TGGTTTCTTTTCAAATTAGT+TGG | - | chr6.3:11485679-11485698 | None:intergenic | 25.0% |
| !! | TTATGTTCAAGTTATGTGAT+AGG | + | chr6.3:11484835-11484854 | MS.gene018235:intron | 25.0% |
| !!! | AAACATTTTGTTTTGCTACA+GGG | + | chr6.3:11488130-11488149 | MS.gene018235:intron | 25.0% |
| !!! | ATTTTGTTCTTTAACTTGCA+TGG | + | chr6.3:11487746-11487765 | MS.gene018235:intron | 25.0% |
| !!! | CTTGTTTTAATGTTTTTGCT+CGG | + | chr6.3:11485557-11485576 | MS.gene018235:intron | 25.0% |
| !!! | CTTTTTATGTTTTTGTACCT+TGG | + | chr6.3:11485177-11485196 | MS.gene018235:intron | 25.0% |
| !!! | GAATTCATTTAGTTCTGTAA+TGG | + | chr6.3:11486411-11486430 | MS.gene018235:intron | 25.0% |
| !!! | GTGAAATTCTAAGTTTGTTA+TGG | + | chr6.3:11485589-11485608 | MS.gene018235:intron | 25.0% |
| !!! | TAAACATTTTGTTTTGCTAC+AGG | + | chr6.3:11488129-11488148 | MS.gene018235:intron | 25.0% |
| !!! | TAGTTCTGTAATGGATTTTT+TGG | + | chr6.3:11486420-11486439 | MS.gene018235:intron | 25.0% |
| !!! | TCATAACATTGATAATGAAC+TGG | + | chr6.3:11485928-11485947 | MS.gene018235:CDS | 25.0% |
| !!! | TTTGGTTTTGTTTGTATTGT+AGG | + | chr6.3:11483796-11483815 | MS.gene018235:intron | 25.0% |
| AAACATTAAAACAAGGGAAC+CGG | - | chr6.3:11485552-11485571 | None:intergenic | 30.0% | |
| AAATTAGCACCCATGAAAAA+CGG | + | chr6.3:11487782-11487801 | MS.gene018235:intron | 30.0% | |
| AAATTTCATACCCAGCATTT+GGG | + | chr6.3:11486300-11486319 | MS.gene018235:CDS | 30.0% | |
| AAGTGCATAAATTTCACGTA+AGG | - | chr6.3:11487697-11487716 | None:intergenic | 30.0% | |
| AGTGCATAAATTTCACGTAA+GGG | - | chr6.3:11487696-11487715 | None:intergenic | 30.0% | |
| CAAGAAAGATTTGTATCGAA+TGG | + | chr6.3:11486838-11486857 | MS.gene018235:intron | 30.0% | |
| CAATAATGCTGTTAGGATTA+TGG | - | chr6.3:11483502-11483521 | None:intergenic | 30.0% | |
| CAGTGCTATACTTAAGAATA+AGG | - | chr6.3:11483697-11483716 | None:intergenic | 30.0% | |
| CATGGTATTAATCAATGTTG+CGG | - | chr6.3:11487921-11487940 | None:intergenic | 30.0% | |
| CGAGCAAAAACATTAAAACA+AGG | - | chr6.3:11485559-11485578 | None:intergenic | 30.0% | |
| CTACTTAAGAGAAGAGAAAA+AGG | - | chr6.3:11488048-11488067 | None:intergenic | 30.0% | |
| CTGAAGTTATCAACAATCAA+AGG | - | chr6.3:11486232-11486251 | None:intergenic | 30.0% | |
| CTTGGGTAAAAATATGAAAG+GGG | - | chr6.3:11485117-11485136 | None:intergenic | 30.0% | |
| GAAACTTGGTAGAAGAAATT+AGG | - | chr6.3:11484402-11484421 | None:intergenic | 30.0% | |
| GAATCTACATCAGTAATGAT+AGG | - | chr6.3:11485435-11485454 | None:intergenic | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | - | chr6.3:11484336-11484355 | None:intergenic | 30.0% | |
| GTGATTCATTCTAATGAATC+GGG | + | chr6.3:11486756-11486775 | MS.gene018235:intron | 30.0% | |
| TGAAACCTTTGCTTAAAAAC+CGG | + | chr6.3:11485530-11485549 | MS.gene018235:intron | 30.0% | |
| TGATTCTTATTGGGTAAACA+TGG | + | chr6.3:11484976-11484995 | MS.gene018235:intron | 30.0% | |
| TGCAAAAACAAGGAAGAAAA+AGG | + | chr6.3:11483293-11483312 | MS.gene018235:CDS | 30.0% | |
| TGTGTTATAATCACTAACGT+TGG | + | chr6.3:11483636-11483655 | MS.gene018235:CDS | 30.0% | |
| TTCACATCTGCATTATCAAT+TGG | + | chr6.3:11485324-11485343 | MS.gene018235:CDS | 30.0% | |
| TTGGGTAAAAATATGAAAGG+GGG | - | chr6.3:11485116-11485135 | None:intergenic | 30.0% | |
| TTGTAGCTAATGCAAAAACA+AGG | + | chr6.3:11483283-11483302 | MS.gene018235:CDS | 30.0% | |
| ! | AAGATTATTAGTGGAAGCAT+TGG | + | chr6.3:11485393-11485412 | MS.gene018235:CDS | 30.0% |
| ! | ACATATGGTAGAAGCATAAA+AGG | + | chr6.3:11487986-11488005 | MS.gene018235:intron | 30.0% |
| ! | TCATGCAACATAGATTTTAG+AGG | - | chr6.3:11484901-11484920 | None:intergenic | 30.0% |
| ! | TGATATTTTCCTCATCAAGA+AGG | + | chr6.3:11486206-11486225 | MS.gene018235:CDS | 30.0% |
| ! | TGTAGTTTTCTATGCATTGA+GGG | + | chr6.3:11486168-11486187 | MS.gene018235:CDS | 30.0% |
| ! | TTTGTTAAATAAGTGTCGCA+TGG | - | chr6.3:11485264-11485283 | None:intergenic | 30.0% |
| ! | TTTTTCATGGGTGCTAATTT+AGG | - | chr6.3:11487782-11487801 | None:intergenic | 30.0% |
| !! | ACTTTGAAACTTCATACATG+TGG | + | chr6.3:11484680-11484699 | MS.gene018235:intron | 30.0% |
| !! | AGATTATTAGTGGAAGCATT+GGG | + | chr6.3:11485394-11485413 | MS.gene018235:CDS | 30.0% |
| !! | TAACATTGATAATGAACTGG+AGG | + | chr6.3:11485931-11485950 | MS.gene018235:CDS | 30.0% |
| !! | TGTTTGCTTTTGATACTTAG+TGG | + | chr6.3:11486452-11486471 | MS.gene018235:intron | 30.0% |
| !!! | AACAGCCACTTTTTTATCAT+TGG | - | chr6.3:11486687-11486706 | None:intergenic | 30.0% |
| !!! | ACTGATTTTGGAATTCCTTT+TGG | + | chr6.3:11486085-11486104 | MS.gene018235:CDS | 30.0% |
| !!! | AGTTTTGTTGCTAAGTTGTT+TGG | + | chr6.3:11485058-11485077 | MS.gene018235:intron | 30.0% |
| !!! | GCCAATTTTGATACTGATTT+TGG | + | chr6.3:11486073-11486092 | MS.gene018235:CDS | 30.0% |
| !!! | TTCTGTAATGGATTTTTTGG+TGG | + | chr6.3:11486423-11486442 | MS.gene018235:intron | 30.0% |
| AAATGAATCACCATGAGTTG+AGG | - | chr6.3:11484463-11484482 | None:intergenic | 35.0% | |
| AAATTCAGCTGCATTATCTG+TGG | + | chr6.3:11485281-11485300 | MS.gene018235:intron | 35.0% | |
| AACAGCATTATTGACAGAGA+AGG | + | chr6.3:11483509-11483528 | MS.gene018235:CDS | 35.0% | |
| AACCATAGTCACATAATTCG+CGG | + | chr6.3:11484220-11484239 | MS.gene018235:intron | 35.0% | |
| AATTTGTCCACCACAGTTAT+TGG | + | chr6.3:11483414-11483433 | MS.gene018235:CDS | 35.0% | |
| ACATACTGACAAGCTTCTTT+GGG | + | chr6.3:11486011-11486030 | MS.gene018235:CDS | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | - | chr6.3:11484432-11484451 | None:intergenic | 35.0% | |
| AGAAGAATTCGGTACGTATA+GGG | + | chr6.3:11484290-11484309 | MS.gene018235:intron | 35.0% | |
| AGGCAATTGAATTCATGATC+AGG | + | chr6.3:11483529-11483548 | MS.gene018235:CDS | 35.0% | |
| AGTGATGACTGATGAGTATT+GGG | - | chr6.3:11485009-11485028 | None:intergenic | 35.0% | |
| ATGCTTCTACCATATGTCAA+TGG | - | chr6.3:11487983-11488002 | None:intergenic | 35.0% | |
| ATTGTAGGTGATGTGATTTC+TGG | + | chr6.3:11483811-11483830 | MS.gene018235:intron | 35.0% | |
| ATTTGGGGGTGATTCTTATT+GGG | + | chr6.3:11484967-11484986 | MS.gene018235:intron | 35.0% | |
| CAAAGTTGACAGAAAAGAAG+TGG | + | chr6.3:11486711-11486730 | MS.gene018235:intron | 35.0% | |
| CAAATTTCATACCCAGCATT+TGG | + | chr6.3:11486299-11486318 | MS.gene018235:CDS | 35.0% | |
| CCACAAAACATGTAAAACCA+AGG | - | chr6.3:11485197-11485216 | None:intergenic | 35.0% | |
| CGGCATTAACCTACTTTATT+TGG | + | chr6.3:11487802-11487821 | MS.gene018235:intron | 35.0% | |
| CTCAATGCATAGAAAACTAC+AGG | - | chr6.3:11486169-11486188 | None:intergenic | 35.0% | |
| CTGATGTGTAACATTGTACA+AGG | - | chr6.3:11487898-11487917 | None:intergenic | 35.0% | |
| GACTCAAACACTAGATAGTA+TGG | + | chr6.3:11484037-11484056 | MS.gene018235:intron | 35.0% | |
| GCCTAACTACTGATATAGTT+AGG | + | chr6.3:11484870-11484889 | MS.gene018235:intron | 35.0% | |
| GCCTAACTATATCAGTAGTT+AGG | - | chr6.3:11484874-11484893 | None:intergenic | 35.0% | |
| GCTTATATCTGTCACTACAA+TGG | + | chr6.3:11485495-11485514 | MS.gene018235:CDS | 35.0% | |
| GTTATGGATTTCCATGAAGA+AGG | + | chr6.3:11485605-11485624 | MS.gene018235:intron | 35.0% | |
| TAAAGACTAATGCAGTGCAA+AGG | - | chr6.3:11485740-11485759 | None:intergenic | 35.0% | |
| TAAGGTTGCATGATTCAGTT+TGG | + | chr6.3:11483778-11483797 | MS.gene018235:intron | 35.0% | |
| TACATACTGACAAGCTTCTT+TGG | + | chr6.3:11486010-11486029 | MS.gene018235:CDS | 35.0% | |
| TACTTCATGGATGTATTGTC+TGG | + | chr6.3:11485867-11485886 | MS.gene018235:intron | 35.0% | |
| TATTGATACAGGCAATGTAC+AGG | - | chr6.3:11485224-11485243 | None:intergenic | 35.0% | |
| TATTTGGGGGTGATTCTTAT+TGG | + | chr6.3:11484966-11484985 | MS.gene018235:intron | 35.0% | |
| TCAATTACTATTGCCCTTGT+TGG | + | chr6.3:11486259-11486278 | MS.gene018235:CDS | 35.0% | |
| TCATTAAGAGCAGAACCAAA+AGG | - | chr6.3:11486103-11486122 | None:intergenic | 35.0% | |
| TCGGAGAAAATTTCGTCTAA+GGG | - | chr6.3:11487949-11487968 | None:intergenic | 35.0% | |
| TCTCTGTCAATAATGCTGTT+AGG | - | chr6.3:11483509-11483528 | None:intergenic | 35.0% | |
| TCTGTTTAGACGAGAACTTA+AGG | + | chr6.3:11483760-11483779 | MS.gene018235:intron | 35.0% | |
| TCTTGACACTTAGGTAACAA+AGG | - | chr6.3:11483339-11483358 | None:intergenic | 35.0% | |
| TGGAAAATAACCCAAATGCT+GGG | - | chr6.3:11486313-11486332 | None:intergenic | 35.0% | |
| TTAATGGAGCTTCATTTCCT+GGG | + | chr6.3:11483382-11483401 | MS.gene018235:CDS | 35.0% | |
| TTCTGCTTTGATCAACAAGA+AGG | + | chr6.3:11488250-11488269 | MS.gene018235:CDS | 35.0% | |
| TTCTTCCTATGGAAGTCTTA+TGG | + | chr6.3:11483572-11483591 | MS.gene018235:CDS | 35.0% | |
| TTGGAAATGGAATGAAGTGA+TGG | - | chr6.3:11485660-11485679 | None:intergenic | 35.0% | |
| TTTAATGGAGCTTCATTTCC+TGG | + | chr6.3:11483381-11483400 | MS.gene018235:CDS | 35.0% | |
| ! | AATTCATGATCAGGTTTTCG+AGG | + | chr6.3:11483538-11483557 | MS.gene018235:CDS | 35.0% |
| ! | AATTTTCTCCGACATTGAGA+TGG | + | chr6.3:11487957-11487976 | MS.gene018235:intron | 35.0% |
| ! | ATACTGAAGAGCATAGAGTA+AGG | - | chr6.3:11485991-11486010 | None:intergenic | 35.0% |
| ! | ATTCATGATCAGGTTTTCGA+GGG | + | chr6.3:11483539-11483558 | MS.gene018235:CDS | 35.0% |
| ! | CTGTAGTTTTCTATGCATTG+AGG | + | chr6.3:11486167-11486186 | MS.gene018235:CDS | 35.0% |
| ! | TACTGAAGAGCATAGAGTAA+GGG | - | chr6.3:11485990-11486009 | None:intergenic | 35.0% |
| ! | TATTTTTCTTCGCCCAGTTT+AGG | - | chr6.3:11484142-11484161 | None:intergenic | 35.0% |
| ! | TCTTCCTATGGAAGTCTTAT+GGG | + | chr6.3:11483573-11483592 | MS.gene018235:CDS | 35.0% |
| ! | TGTTCAAGTTATGTGATAGG+AGG | + | chr6.3:11484838-11484857 | MS.gene018235:intron | 35.0% |
| ! | TTCTTTGGGTTCCTTCTATT+TGG | + | chr6.3:11486025-11486044 | MS.gene018235:CDS | 35.0% |
| ! | TTCTTTTCCTTGTCATTGCT+GGG | + | chr6.3:11485355-11485374 | MS.gene018235:CDS | 35.0% |
| !! | TTGAGCACTGATATTGATAC+AGG | - | chr6.3:11485235-11485254 | None:intergenic | 35.0% |
| !! | TTTACAACACTTGCTGTGTT+TGG | + | chr6.3:11483922-11483941 | MS.gene018235:CDS | 35.0% |
| !!! | ACCTTTTTTCAACCAATCAG+CGG | + | chr6.3:11484504-11484523 | MS.gene018235:intron | 35.0% |
| !!! | AGGTTAATGCCGTTTTTCAT+GGG | - | chr6.3:11487794-11487813 | None:intergenic | 35.0% |
| !!! | CCTTGGTTTTACATGTTTTG+TGG | + | chr6.3:11485194-11485213 | MS.gene018235:intron | 35.0% |
| !!! | TAGGTTAATGCCGTTTTTCA+TGG | - | chr6.3:11487795-11487814 | None:intergenic | 35.0% |
| !!! | TATTTATTTTGGGGTAGCCA+TGG | - | chr6.3:11486956-11486975 | None:intergenic | 35.0% |
| AAAAAGTTGGGAATGGTACC+TGG | + | chr6.3:11483468-11483487 | MS.gene018235:CDS | 40.0% | |
| AAACCGCCATCACTATCATA+AGG | - | chr6.3:11488199-11488218 | None:intergenic | 40.0% | |
| AACCGCGAATTATGTGACTA+TGG | - | chr6.3:11484225-11484244 | None:intergenic | 40.0% | |
| AATCAAAGGCCTTCTTGATG+AGG | - | chr6.3:11486218-11486237 | None:intergenic | 40.0% | |
| AGTAATGATAGGGAAGAGTC+TGG | - | chr6.3:11485424-11485443 | None:intergenic | 40.0% | |
| ATATAAGCTGTCATCAGCAC+AGG | - | chr6.3:11485483-11485502 | None:intergenic | 40.0% | |
| ATCAAGGGAGAATTGCGAAT+TGG | - | chr6.3:11484608-11484627 | None:intergenic | 40.0% | |
| ATCTCCCATAAGACTTCCAT+AGG | - | chr6.3:11483580-11483599 | None:intergenic | 40.0% | |
| ATGGAATGAAGTGATGGTTG+TGG | - | chr6.3:11485654-11485673 | None:intergenic | 40.0% | |
| CAAGTTATGTGATAGGAGGA+CGG | + | chr6.3:11484842-11484861 | MS.gene018235:intron | 40.0% | |
| CCTAAGTGTCAAGAAACAGA+TGG | + | chr6.3:11483345-11483364 | MS.gene018235:CDS | 40.0% | |
| CGGAGAAAATTTCGTCTAAG+GGG | - | chr6.3:11487948-11487967 | None:intergenic | 40.0% | |
| CGGGATTCATCATAGTGAAT+CGG | + | chr6.3:11486775-11486794 | MS.gene018235:intron | 40.0% | |
| CTGGAAAATAACCCAAATGC+TGG | - | chr6.3:11486314-11486333 | None:intergenic | 40.0% | |
| GAAGAATTCGGTACGTATAG+GGG | + | chr6.3:11484291-11484310 | MS.gene018235:intron | 40.0% | |
| GAGAAGAATTCGGTACGTAT+AGG | + | chr6.3:11484289-11484308 | MS.gene018235:intron | 40.0% | |
| GAGTGATGACTGATGAGTAT+TGG | - | chr6.3:11485010-11485029 | None:intergenic | 40.0% | |
| GAGTTCCTTCACCAAATAGA+AGG | - | chr6.3:11486039-11486058 | None:intergenic | 40.0% | |
| GATTTCCATGAAGAAGGTTG+AGG | + | chr6.3:11485611-11485630 | MS.gene018235:intron | 40.0% | |
| GTAATGATAGGGAAGAGTCT+GGG | - | chr6.3:11485423-11485442 | None:intergenic | 40.0% | |
| GTCATCACTCAAGTGCAAAT+TGG | + | chr6.3:11485020-11485039 | MS.gene018235:intron | 40.0% | |
| GTCGGAGAAAATTTCGTCTA+AGG | - | chr6.3:11487950-11487969 | None:intergenic | 40.0% | |
| GTCTTATGGGAGATACCTTT+GGG | + | chr6.3:11483586-11483605 | MS.gene018235:CDS | 40.0% | |
| TAAGACCTCAACCTTCTTCA+TGG | - | chr6.3:11485619-11485638 | None:intergenic | 40.0% | |
| TAATGGAGCTTCATTTCCTG+GGG | + | chr6.3:11483383-11483402 | MS.gene018235:CDS | 40.0% | |
| TTCATGGATGTATTGTCTGG+TGG | + | chr6.3:11485870-11485889 | MS.gene018235:intron | 40.0% | |
| TTGAGATGGCCATTGACATA+TGG | + | chr6.3:11487971-11487990 | MS.gene018235:intron | 40.0% | |
| TTGCGTCAAAAAGTTGGGAA+TGG | + | chr6.3:11483461-11483480 | MS.gene018235:CDS | 40.0% | |
| TTGGTCAGCTTAAAGCGAAT+TGG | + | chr6.3:11483949-11483968 | MS.gene018235:CDS | 40.0% | |
| ! | AAGAGAAAAAGGGCTCTGAT+AGG | - | chr6.3:11488037-11488056 | None:intergenic | 40.0% |
| ! | ACCGCTGATTGGTTGAAAAA+AGG | - | chr6.3:11484508-11484527 | None:intergenic | 40.0% |
| ! | AGAGAAAAAGGGCTCTGATA+GGG | - | chr6.3:11488036-11488055 | None:intergenic | 40.0% |
| ! | AGTCTTATGGGAGATACCTT+TGG | + | chr6.3:11483585-11483604 | MS.gene018235:CDS | 40.0% |
| ! | ATTCGCTTTAAGCTGACCAA+AGG | - | chr6.3:11483949-11483968 | None:intergenic | 40.0% |
| ! | CCATCTGTTTCTTGACACTT+AGG | - | chr6.3:11483348-11483367 | None:intergenic | 40.0% |
| ! | GGAGATACCTTTGGGAAATA+CGG | + | chr6.3:11483594-11483613 | MS.gene018235:CDS | 40.0% |
| ! | GTCTGTCCTTATGATAGTGA+TGG | + | chr6.3:11488190-11488209 | MS.gene018235:CDS | 40.0% |
| ! | GTTCTTTTCCTTGTCATTGC+TGG | + | chr6.3:11485354-11485373 | MS.gene018235:CDS | 40.0% |
| ! | TCTGATAGGGTTTTGCCTTA+GGG | - | chr6.3:11488023-11488042 | None:intergenic | 40.0% |
| ! | TCTTTTCCTTGTCATTGCTG+GGG | + | chr6.3:11485356-11485375 | MS.gene018235:CDS | 40.0% |
| ! | TGCTTTTCCGTATTTCCCAA+AGG | - | chr6.3:11483604-11483623 | None:intergenic | 40.0% |
| ! | TGTCCTTATGATAGTGATGG+CGG | + | chr6.3:11488193-11488212 | MS.gene018235:CDS | 40.0% |
| !! | ATTTCTGGAACAACTTCAGG+TGG | + | chr6.3:11483826-11483845 | MS.gene018235:CDS | 40.0% |
| !! | GTGATTTCTGGAACAACTTC+AGG | + | chr6.3:11483823-11483842 | MS.gene018235:CDS | 40.0% |
| !! | TGGGTTATTTTCCAGTTCTC+TGG | + | chr6.3:11486319-11486338 | MS.gene018235:CDS | 40.0% |
| AAAGCATGGTTACCGCTGAT+TGG | - | chr6.3:11484519-11484538 | None:intergenic | 45.0% | |
| AACCATCCTTCAAGGATACC+AGG | - | chr6.3:11483862-11483881 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | + | chr6.3:11484518-11484537 | MS.gene018235:intron | 45.0% | |
| ACATAATTCGCGGTTCGTTC+CGG | + | chr6.3:11484230-11484249 | MS.gene018235:intron | 45.0% | |
| AGAGTGGAGAGTGAGAAACT+TGG | - | chr6.3:11484416-11484435 | None:intergenic | 45.0% | |
| AGGATTATGGCAAGAAGACC+AGG | - | chr6.3:11483489-11483508 | None:intergenic | 45.0% | |
| ATCCTGGTATCCTTGAAGGA+TGG | + | chr6.3:11483857-11483876 | MS.gene018235:CDS | 45.0% | |
| ATGAACTGGAGGATTCCTCA+CGG | + | chr6.3:11485942-11485961 | MS.gene018235:CDS | 45.0% | |
| CATCATCCTGGTATCCTTGA+AGG | + | chr6.3:11483853-11483872 | MS.gene018235:CDS | 45.0% | |
| CCTGCTTGCGTCAAAAAGTT+GGG | + | chr6.3:11483456-11483475 | MS.gene018235:CDS | 45.0% | |
| CTTGTTGGCACTATCTTCCT+CGG | + | chr6.3:11486274-11486293 | MS.gene018235:CDS | 45.0% | |
| GACAAATTGAAAACAGCCCC+AGG | - | chr6.3:11483402-11483421 | None:intergenic | 45.0% | |
| GAGGAAGATAGTGCCAACAA+GGG | - | chr6.3:11486275-11486294 | None:intergenic | 45.0% | |
| GATTCCATCCGTCCTAAACT+GGG | + | chr6.3:11484127-11484146 | MS.gene018235:intron | 45.0% | |
| GCAGGGAATCTTTCTTCCTA+TGG | + | chr6.3:11483561-11483580 | MS.gene018235:CDS | 45.0% | |
| GCATTGAGGGTCAACATAGA+TGG | + | chr6.3:11486181-11486200 | MS.gene018235:CDS | 45.0% | |
| GGCTACCTCATGTTAGTGAA+GGG | - | chr6.3:11486935-11486954 | None:intergenic | 45.0% | |
| GGTATCCTTGAAGGATGGTT+TGG | + | chr6.3:11483862-11483881 | MS.gene018235:CDS | 45.0% | |
| GTCAATGGCCATCTCAATGT+CGG | - | chr6.3:11487968-11487987 | None:intergenic | 45.0% | |
| GTTGACAGAAAAGAAGTGGC+TGG | + | chr6.3:11486715-11486734 | MS.gene018235:intron | 45.0% | |
| TAACCATGCTTTGGTACGCT+TGG | + | chr6.3:11484527-11484546 | MS.gene018235:intron | 45.0% | |
| TACGCGACAGGAGAAGAATT+CGG | + | chr6.3:11484279-11484298 | MS.gene018235:intron | 45.0% | |
| TCACTAACATGAGGTAGCCA+TGG | + | chr6.3:11486936-11486955 | MS.gene018235:intron | 45.0% | |
| TCAGGTGGAATACATCATCC+TGG | + | chr6.3:11483841-11483860 | MS.gene018235:CDS | 45.0% | |
| TGATTCCATCCGTCCTAAAC+TGG | + | chr6.3:11484126-11484145 | MS.gene018235:intron | 45.0% | |
| TGGCTACCTCATGTTAGTGA+AGG | - | chr6.3:11486936-11486955 | None:intergenic | 45.0% | |
| TGTCATCAGCACAGGAACTA+CGG | - | chr6.3:11485475-11485494 | None:intergenic | 45.0% | |
| TTCCAGCTGCAATCACTTTG+AGG | + | chr6.3:11486374-11486393 | MS.gene018235:CDS | 45.0% | |
| TTGTTGGCACTATCTTCCTC+GGG | + | chr6.3:11486275-11486294 | MS.gene018235:CDS | 45.0% | |
| TTTCTTCGCCCAGTTTAGGA+CGG | - | chr6.3:11484138-11484157 | None:intergenic | 45.0% | |
| ! | AGTACCGAATTCGGGTACTT+CGG | - | chr6.3:11484579-11484598 | None:intergenic | 45.0% |
| ! | CGTATAGGGGTATACAGCTT+CGG | + | chr6.3:11484304-11484323 | MS.gene018235:intron | 45.0% |
| ! | CTCTGATAGGGTTTTGCCTT+AGG | - | chr6.3:11488024-11488043 | None:intergenic | 45.0% |
| ! | CTTTTCCTTGTCATTGCTGG+GGG | + | chr6.3:11485357-11485376 | MS.gene018235:CDS | 45.0% |
| ! | GGGTTCCTTCTATTTGGTGA+AGG | + | chr6.3:11486031-11486050 | MS.gene018235:CDS | 45.0% |
| ! | TGGGAAATACGGAAAAGCAC+TGG | + | chr6.3:11483605-11483624 | MS.gene018235:CDS | 45.0% |
| ! | TTTCGTCTAAGGGGTATGCA+TGG | - | chr6.3:11487939-11487958 | None:intergenic | 45.0% |
| ! | TTTTCCTTGTCATTGCTGGG+GGG | + | chr6.3:11485358-11485377 | MS.gene018235:CDS | 45.0% |
| !! | AAGGATGGTTTGGTGTCCAT+TGG | + | chr6.3:11483872-11483891 | MS.gene018235:CDS | 45.0% |
| !! | ACTTGCTGTGTTTGGACCTT+TGG | + | chr6.3:11483930-11483949 | MS.gene018235:CDS | 45.0% |
| !! | AGTTATTGGTGCTGGGATCA+TGG | + | chr6.3:11483428-11483447 | MS.gene018235:CDS | 45.0% |
| !! | CAATCACTTTGAGGTGAGTC+TGG | + | chr6.3:11486383-11486402 | MS.gene018235:intron | 45.0% |
| !! | GCATTAGCTACAAGAGCATC+AGG | - | chr6.3:11483276-11483295 | None:intergenic | 45.0% |
| !! | GGGAACCGGTTTTTAAGCAA+AGG | - | chr6.3:11485538-11485557 | None:intergenic | 45.0% |
| !! | GTTATTGGTGCTGGGATCAT+GGG | + | chr6.3:11483429-11483448 | MS.gene018235:CDS | 45.0% |
| !! | TGGTACGTGAGTACCGAATT+CGG | - | chr6.3:11484588-11484607 | None:intergenic | 45.0% |
| !!! | TTTATTTATTTTTAATTTGT+CGG | - | chr6.3:11484716-11484735 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTCTTTAAATT+TGG | + | chr6.3:11487670-11487689 | MS.gene018235:intron | 5.0% |
| AAGGCAGAGAGAAAGCCCTA+AGG | + | chr6.3:11488005-11488024 | MS.gene018235:intron | 50.0% | |
| ATTCGGGTACTTCGGCGTAT+TGG | - | chr6.3:11484571-11484590 | None:intergenic | 50.0% | |
| CACCTCAAAGTGATTGCAGC+TGG | - | chr6.3:11486379-11486398 | None:intergenic | 50.0% | |
| CGAGGAAGATAGTGCCAACA+AGG | - | chr6.3:11486276-11486295 | None:intergenic | 50.0% | |
| CGTAGCCCTTCACTAACATG+AGG | + | chr6.3:11486927-11486946 | MS.gene018235:intron | 50.0% | |
| CTCACTCAGTCCTCAACTCA+TGG | + | chr6.3:11484450-11484469 | MS.gene018235:intron | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | - | chr6.3:11484533-11484552 | None:intergenic | 50.0% | |
| GATCCCAGCACCAATAACTG+TGG | - | chr6.3:11483427-11483446 | None:intergenic | 50.0% | |
| GCCTGCTTGCGTCAAAAAGT+TGG | + | chr6.3:11483455-11483474 | MS.gene018235:CDS | 50.0% | |
| GGACACCAAACCATCCTTCA+AGG | - | chr6.3:11483870-11483889 | None:intergenic | 50.0% | |
| GTCTTCCCAGTTCCGACTAA+TGG | - | chr6.3:11485836-11485855 | None:intergenic | 50.0% | |
| GTGCACCATTAGTCGGAACT+GGG | + | chr6.3:11485828-11485847 | MS.gene018235:intron | 50.0% | |
| TATACAGCTTCGGTACGCTC+CGG | + | chr6.3:11484314-11484333 | MS.gene018235:intron | 50.0% | |
| TCCACCACAGTTATTGGTGC+TGG | + | chr6.3:11483420-11483439 | MS.gene018235:CDS | 50.0% | |
| TCTGGCTGTGCACCATTAGT+CGG | + | chr6.3:11485821-11485840 | MS.gene018235:intron | 50.0% | |
| TGGGTATGAAATTTGCCCCG+AGG | - | chr6.3:11486294-11486313 | None:intergenic | 50.0% | |
| TGTGCACCATTAGTCGGAAC+TGG | + | chr6.3:11485827-11485846 | MS.gene018235:intron | 50.0% | |
| TGTTGGCACTATCTTCCTCG+GGG | + | chr6.3:11486276-11486295 | MS.gene018235:CDS | 50.0% | |
| ! | CCACCACAGTTATTGGTGCT+GGG | + | chr6.3:11483421-11483440 | MS.gene018235:CDS | 50.0% |
| ! | CCCAACTTTTTGACGCAAGC+AGG | - | chr6.3:11483459-11483478 | None:intergenic | 50.0% |
| ! | TACGCCGAAGTACCCGAATT+CGG | + | chr6.3:11484572-11484591 | MS.gene018235:intron | 50.0% |
| !! | ATGATCAGGTTTTCGAGGGC+AGG | + | chr6.3:11483543-11483562 | MS.gene018235:CDS | 50.0% |
| !! | GATGGTTTGGTGTCCATTGG+TGG | + | chr6.3:11483875-11483894 | MS.gene018235:CDS | 50.0% |
| !! | GGCGGTTTTGTCAAATGCTG+TGG | + | chr6.3:11488211-11488230 | MS.gene018235:CDS | 50.0% |
| !! | GGTACGTGAGTACCGAATTC+GGG | - | chr6.3:11484587-11484606 | None:intergenic | 50.0% |
| !! | TGATCAGGTTTTCGAGGGCA+GGG | + | chr6.3:11483544-11483563 | MS.gene018235:CDS | 50.0% |
| !! | TTCCAGTTCTCTGGAGCAAC+AGG | + | chr6.3:11486328-11486347 | MS.gene018235:CDS | 50.0% |
| !! | TTGGTGTCCATTGGTGGACT+GGG | + | chr6.3:11483881-11483900 | MS.gene018235:CDS | 50.0% |
| !! | TTTGGTGTCCATTGGTGGAC+TGG | + | chr6.3:11483880-11483899 | MS.gene018235:CDS | 50.0% |
| AGATCCCCCCAGCAATGACA+AGG | - | chr6.3:11485365-11485384 | None:intergenic | 55.0% | |
| AGGATTCCTCACGGATGCGT+GGG | + | chr6.3:11485951-11485970 | MS.gene018235:CDS | 55.0% | |
| CACCTGTTGCTCCAGAGAAC+TGG | - | chr6.3:11486333-11486352 | None:intergenic | 55.0% | |
| CCCAGCACCAATAACTGTGG+TGG | - | chr6.3:11483424-11483443 | None:intergenic | 55.0% | |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | + | chr6.3:11484535-11484554 | MS.gene018235:intron | 55.0% |
| ! | TTCGCCCAGTTTAGGACGGA+TGG | - | chr6.3:11484134-11484153 | None:intergenic | 55.0% |
| !! | GCTACAAGAGCATCAGGTGC+AGG | - | chr6.3:11483270-11483289 | None:intergenic | 55.0% |
| ATGTGCGCCCAGTCCACCAA+TGG | - | chr6.3:11483891-11483910 | None:intergenic | 60.0% | |
| GAGGATTCCTCACGGATGCG+TGG | + | chr6.3:11485950-11485969 | MS.gene018235:CDS | 60.0% | |
| GGATTCCTCACGGATGCGTG+GGG | + | chr6.3:11485952-11485971 | MS.gene018235:CDS | 60.0% | |
| GTTCGTTCCGGTACGCGGTA+CGG | + | chr6.3:11484242-11484261 | MS.gene018235:intron | 60.0% | |
| TTCGTTCCGGTACGCGGTAC+GGG | + | chr6.3:11484243-11484262 | MS.gene018235:intron | 60.0% | |
| CACAACCCCACGCATCCGTG+AGG | - | chr6.3:11485960-11485979 | None:intergenic | 65.0% | |
| TCCGGTACGCGGTACGGGTA+CGG | + | chr6.3:11484248-11484267 | MS.gene018235:intron | 65.0% | |
| TCGCGGTTCGTTCCGGTACG+CGG | + | chr6.3:11484237-11484256 | MS.gene018235:intron | 65.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | + | chr6.3:11484267-11484286 | MS.gene018235:intron | 70.0% | |
| CCCGTACCCGTACCGCGTAC+CGG | - | chr6.3:11484252-11484271 | None:intergenic | 70.0% | |
| CCGGTACGCGGTACGGGTAC+GGG | + | chr6.3:11484249-11484268 | MS.gene018235:intron | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | + | chr6.3:11484256-11484275 | MS.gene018235:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 11483252 | 11488280 | 11483252 | ID=MS.gene018235 |
| chr6.3 | mRNA | 11483252 | 11488280 | 11483252 | ID=MS.gene018235.t1;Parent=MS.gene018235 |
| chr6.3 | exon | 11483252 | 11483687 | 11483252 | ID=MS.gene018235.t1.exon1;Parent=MS.gene018235.t1 |
| chr6.3 | CDS | 11483252 | 11483687 | 11483252 | ID=cds.MS.gene018235.t1;Parent=MS.gene018235.t1 |
| chr6.3 | exon | 11483818 | 11483970 | 11483818 | ID=MS.gene018235.t1.exon2;Parent=MS.gene018235.t1 |
| chr6.3 | CDS | 11483818 | 11483970 | 11483818 | ID=cds.MS.gene018235.t1;Parent=MS.gene018235.t1 |
| chr6.3 | exon | 11485313 | 11485516 | 11485313 | ID=MS.gene018235.t1.exon3;Parent=MS.gene018235.t1 |
| chr6.3 | CDS | 11485313 | 11485516 | 11485313 | ID=cds.MS.gene018235.t1;Parent=MS.gene018235.t1 |
| chr6.3 | exon | 11485927 | 11486395 | 11485927 | ID=MS.gene018235.t1.exon4;Parent=MS.gene018235.t1 |
| chr6.3 | CDS | 11485927 | 11486395 | 11485927 | ID=cds.MS.gene018235.t1;Parent=MS.gene018235.t1 |
| chr6.3 | exon | 11488151 | 11488280 | 11488151 | ID=MS.gene018235.t1.exon5;Parent=MS.gene018235.t1 |
| chr6.3 | CDS | 11488151 | 11488280 | 11488151 | ID=cds.MS.gene018235.t1;Parent=MS.gene018235.t1 |
| Gene Sequence |
| Protein sequence |
