Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053189 | MS.gene067981 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene067981 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene053677 | MS.gene067981 | 0.802849 | 4.62E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene067981 | 0.816666 | 4.92E-52 | -1.69E-46 |
| MS.gene056764 | MS.gene067981 | 0.814522 | 1.48E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene067981 | 0.803675 | 3.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 25 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCTTAGTTCCCTTAAT+TGG | 0.202938 | 8.3:+30995819 | MS.gene067981:intron |
| TTACATGAATTTAATATCTT+TGG | 0.208781 | 8.3:-30995428 | None:intergenic |
| TCTGCATCAAACACCAATTA+AGG | 0.211850 | 8.3:-30995832 | None:intergenic |
| AGTGACTATGACAATGTAAT+TGG | 0.287106 | 8.3:+30994104 | MS.gene067981:CDS |
| GAAGAGTTATAAAGAGAATA+TGG | 0.323678 | 8.3:+30995871 | MS.gene067981:CDS |
| AATCCTGGACTCACCGCTTA+TGG | 0.358745 | 8.3:-30996352 | None:intergenic |
| TTTCTGCTTACTTTCAGATA+TGG | 0.359746 | 8.3:-30994134 | None:intergenic |
| CCGCTTATGGTGACATCATA+AGG | 0.359764 | 8.3:-30996339 | None:intergenic |
| TCCCTCTCATGCATGATATC+TGG | 0.374941 | 8.3:-30996382 | None:intergenic |
| CAGGTTCTACATGGTGCATC+TGG | 0.398474 | 8.3:+30993267 | None:intergenic |
| ATAAGGGCTGGTGCACCTAC+TGG | 0.427494 | 8.3:-30996322 | None:intergenic |
| ATATCTGGCCTCACTAATCC+TGG | 0.482839 | 8.3:-30996367 | None:intergenic |
| CTGCATCAAACACCAATTAA+GGG | 0.486459 | 8.3:-30995831 | None:intergenic |
| CTTATAAGCGTGTACGTGGC+AGG | 0.500665 | 8.3:+30996181 | MS.gene067981:CDS |
| TCACCATAAGCGGTGAGTCC+AGG | 0.505916 | 8.3:+30996349 | MS.gene067981:CDS |
| CGCTTATGGTGACATCATAA+GGG | 0.505983 | 8.3:-30996338 | None:intergenic |
| AAAGCTTAATGTAAGAATCT+CGG | 0.527749 | 8.3:-30996127 | None:intergenic |
| TATGGTGACATCATAAGGGC+TGG | 0.556208 | 8.3:-30996334 | None:intergenic |
| GCTTTACTCATGATGCTGAA+AGG | 0.577029 | 8.3:+30996145 | MS.gene067981:CDS |
| CCTTATGATGTCACCATAAG+CGG | 0.579231 | 8.3:+30996339 | MS.gene067981:CDS |
| TGAGCTACTGATAGACATTG+AGG | 0.599509 | 8.3:+30995910 | MS.gene067981:CDS |
| CAGTCTTATAAGCGTGTACG+TGG | 0.609552 | 8.3:+30996177 | MS.gene067981:CDS |
| CGGTGAGTCCAGGATTAGTG+AGG | 0.671978 | 8.3:+30996359 | MS.gene067981:CDS |
| GCAAGGGACAGGCTTCCAGT+AGG | 0.671994 | 8.3:+30996307 | MS.gene067981:intron |
| TGTACGTGGCAGGTTGACCG+AGG | 0.702164 | 8.3:+30996191 | MS.gene067981:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAACAACTTTCAAA+TGG | - | chr8.3:30994249-30994268 | None:intergenic | 15.0% |
| !! | AAAGAAGTAATAATAAAAAG+TGG | - | chr8.3:30995746-30995765 | None:intergenic | 15.0% |
| !! | AAAGATATTAAATTCATGTA+AGG | + | chr8.3:30995430-30995449 | MS.gene067981:intron | 15.0% |
| !! | AAATTATTGAGAAATAATGT+TGG | + | chr8.3:30994455-30994474 | MS.gene067981:intron | 15.0% |
| !! | TGGAATATTTATATGAAAAT+TGG | + | chr8.3:30996280-30996299 | MS.gene067981:intron | 15.0% |
| !! | TTACATGAATTTAATATCTT+TGG | - | chr8.3:30995431-30995450 | None:intergenic | 15.0% |
| !!! | ATATATGTTGTTTTGTAAAT+AGG | + | chr8.3:30993985-30994004 | MS.gene067981:intron | 15.0% |
| !!! | CATAACAAATTTTAGTAAAA+TGG | - | chr8.3:30996247-30996266 | None:intergenic | 15.0% |
| !!! | TTTATTTTACAAATGAATTG+AGG | + | chr8.3:30994261-30994280 | MS.gene067981:intron | 15.0% |
| !! | ACAGACGTAATAAAATTAAT+AGG | - | chr8.3:30994979-30994998 | None:intergenic | 20.0% |
| !! | ACTATATGAATTTCAGAATT+TGG | + | chr8.3:30994723-30994742 | MS.gene067981:intron | 20.0% |
| !! | CATATATAATATTTGTGTAC+TGG | - | chr8.3:30993633-30993652 | None:intergenic | 20.0% |
| !! | GTAGGTATTTATTGAATAAA+TGG | + | chr8.3:30994378-30994397 | MS.gene067981:intron | 20.0% |
| !! | GTATGTAACAAACAAAAATA+TGG | - | chr8.3:30994780-30994799 | None:intergenic | 20.0% |
| !! | TATTATATCTCTTTCTCTAT+AGG | + | chr8.3:30995530-30995549 | MS.gene067981:intron | 20.0% |
| !! | TGAACTAAAACAAAAGAATA+CGG | - | chr8.3:30995609-30995628 | None:intergenic | 20.0% |
| !! | TGTTATAATAATGAGTGAAT+AGG | + | chr8.3:30994482-30994501 | MS.gene067981:intron | 20.0% |
| !! | TGTTATGTAATGTTTAATGT+TGG | + | chr8.3:30996260-30996279 | MS.gene067981:intron | 20.0% |
| !!! | AAATGTGCAAATTTTTTGAA+AGG | - | chr8.3:30993719-30993738 | None:intergenic | 20.0% |
| !!! | AAGCATTTATTTTTATCTGA+TGG | + | chr8.3:30995361-30995380 | MS.gene067981:intron | 20.0% |
| !!! | AATGTGCAAATTTTTTGAAA+GGG | - | chr8.3:30993718-30993737 | None:intergenic | 20.0% |
| !!! | ACATACATCTTTAAAAAACA+TGG | - | chr8.3:30993820-30993839 | None:intergenic | 20.0% |
| !!! | AGAACACATATAATTGTTTT+TGG | + | chr8.3:30994329-30994348 | MS.gene067981:intron | 20.0% |
| !!! | ATATAGTTAGTATCACTTTT+AGG | + | chr8.3:30994861-30994880 | MS.gene067981:intron | 20.0% |
| !!! | GTTTTTTAAAGATGTATGTT+TGG | + | chr8.3:30993821-30993840 | MS.gene067981:intron | 20.0% |
| !!! | TTTAAAAAACATGGCAATTT+TGG | - | chr8.3:30993811-30993830 | None:intergenic | 20.0% |
| ! | AAAGCTTAATGTAAGAATCT+CGG | - | chr8.3:30996130-30996149 | None:intergenic | 25.0% |
| ! | AATTCATATAGTTGAAGAAC+TGG | - | chr8.3:30994715-30994734 | None:intergenic | 25.0% |
| ! | AGTTAGAGATGAGAAAATTA+AGG | - | chr8.3:30994048-30994067 | None:intergenic | 25.0% |
| ! | AGTTCCTGATGATTATATTT+AGG | + | chr8.3:30994539-30994558 | MS.gene067981:intron | 25.0% |
| ! | ATAATTGTGTTTGTTCATGA+AGG | + | chr8.3:30993889-30993908 | MS.gene067981:intron | 25.0% |
| ! | ATATGAAAATTGGAAATGCA+AGG | + | chr8.3:30996290-30996309 | MS.gene067981:intron | 25.0% |
| ! | CAAACCTAAATATAATCATC+AGG | - | chr8.3:30994546-30994565 | None:intergenic | 25.0% |
| ! | CATAAAATAAGTTATCACCA+AGG | - | chr8.3:30994606-30994625 | None:intergenic | 25.0% |
| ! | CATGTATATTATCTTGCATA+TGG | + | chr8.3:30994401-30994420 | MS.gene067981:intron | 25.0% |
| ! | GAAGAGTTATAAAGAGAATA+TGG | + | chr8.3:30995871-30995890 | MS.gene067981:CDS | 25.0% |
| ! | GATAGTAATAGAATATGCAA+AGG | - | chr8.3:30995642-30995661 | None:intergenic | 25.0% |
| ! | GTAACAAACAAAAATATGGT+GGG | - | chr8.3:30994776-30994795 | None:intergenic | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | + | chr8.3:30993293-30993312 | MS.gene067981:intron | 25.0% |
| ! | GTTAGAGATGAGAAAATTAA+GGG | - | chr8.3:30994047-30994066 | None:intergenic | 25.0% |
| ! | GTTATTGAGGGTAATTAAAT+AGG | + | chr8.3:30995167-30995186 | MS.gene067981:intron | 25.0% |
| ! | TAGGAAACTTCTATTTGATT+AGG | + | chr8.3:30994004-30994023 | MS.gene067981:intron | 25.0% |
| ! | TATGAAAATTGGAAATGCAA+GGG | + | chr8.3:30996291-30996310 | MS.gene067981:intron | 25.0% |
| ! | TGTAACAAACAAAAATATGG+TGG | - | chr8.3:30994777-30994796 | None:intergenic | 25.0% |
| ! | TTAAAGATGTATGTTTGGAT+TGG | + | chr8.3:30993826-30993845 | MS.gene067981:intron | 25.0% |
| !! | ATTTTACAAATGAATTGAGG+TGG | + | chr8.3:30994264-30994283 | MS.gene067981:intron | 25.0% |
| !! | TATCTTCAATGATTTGTGTA+TGG | + | chr8.3:30994665-30994684 | MS.gene067981:intron | 25.0% |
| !! | TATGTTGTTTGTTCATGATT+TGG | - | chr8.3:30995505-30995524 | None:intergenic | 25.0% |
| !! | TCATTGAAGATATTTTGCAT+TGG | - | chr8.3:30994657-30994676 | None:intergenic | 25.0% |
| !! | TTTAACTTCTAATGCAAATC+AGG | + | chr8.3:30994899-30994918 | MS.gene067981:intron | 25.0% |
| !! | TTTGGAATTTCACATACTTT+AGG | + | chr8.3:30995264-30995283 | MS.gene067981:intron | 25.0% |
| !! | TTTGTTTGTTACATACTAGA+TGG | + | chr8.3:30994784-30994803 | MS.gene067981:intron | 25.0% |
| !! | TTTTCTTTTTGTAAGTTGCA+TGG | - | chr8.3:30993319-30993338 | None:intergenic | 25.0% |
| !!! | TCTCTAACTTTTGTTTATTG+TGG | + | chr8.3:30994059-30994078 | MS.gene067981:intron | 25.0% |
| !!! | TTCAAGTTTTGCTTATGTTT+AGG | - | chr8.3:30995710-30995729 | None:intergenic | 25.0% |
| !!! | TTTGGAATTTTGAACTTCAT+TGG | + | chr8.3:30994347-30994366 | MS.gene067981:intron | 25.0% |
| AATTTCTGTCTCCTTTACTT+TGG | + | chr8.3:30995120-30995139 | MS.gene067981:intron | 30.0% | |
| ACATTAAATTCTCCAATACC+AGG | - | chr8.3:30996001-30996020 | None:intergenic | 30.0% | |
| AGACTTACAAATCCTTAAAC+AGG | - | chr8.3:30994210-30994229 | None:intergenic | 30.0% | |
| AGTGACTATGACAATGTAAT+TGG | + | chr8.3:30994104-30994123 | MS.gene067981:CDS | 30.0% | |
| ATGAATTGTTGAAGCAGAAT+AGG | + | chr8.3:30993521-30993540 | MS.gene067981:intron | 30.0% | |
| CGTGTATACATATATGTTCA+TGG | + | chr8.3:30996064-30996083 | MS.gene067981:intron | 30.0% | |
| TCATTTAAACTTACAGACAG+TGG | - | chr8.3:30995676-30995695 | None:intergenic | 30.0% | |
| TCTGAATTATGAATCTTGCA+TGG | + | chr8.3:30994183-30994202 | MS.gene067981:intron | 30.0% | |
| TGAACATATATGTATACACG+TGG | - | chr8.3:30996064-30996083 | None:intergenic | 30.0% | |
| TTTCTGCTTACTTTCAGATA+TGG | - | chr8.3:30994137-30994156 | None:intergenic | 30.0% | |
| ! | CAAATGGTGTAAAAGCATAT+TGG | - | chr8.3:30994233-30994252 | None:intergenic | 30.0% |
| ! | GAGTGTTTAGATTTGTTTGT+AGG | + | chr8.3:30993853-30993872 | MS.gene067981:intron | 30.0% |
| ! | GATTTGGTTTCTAAACCATA+AGG | - | chr8.3:30995489-30995508 | None:intergenic | 30.0% |
| !! | AAGCTAAGTTGATGTATCAT+AGG | - | chr8.3:30993929-30993948 | None:intergenic | 30.0% |
| !!! | AGACTCACAATTTTTTTCCT+TGG | + | chr8.3:30994586-30994605 | MS.gene067981:intron | 30.0% |
| AACACCAATTAAGGGAACTA+AGG | - | chr8.3:30995826-30995845 | None:intergenic | 35.0% | |
| ACACCAATTAAGGGAACTAA+GGG | - | chr8.3:30995825-30995844 | None:intergenic | 35.0% | |
| AGAGTAATCAGCCAAAGTAA+AGG | - | chr8.3:30995134-30995153 | None:intergenic | 35.0% | |
| CATATAGTTGAAGAACTGGT+AGG | - | chr8.3:30994711-30994730 | None:intergenic | 35.0% | |
| CATGTCATACTAATCTGTGT+TGG | + | chr8.3:30995221-30995240 | MS.gene067981:intron | 35.0% | |
| CTACAAGTGATGGTTATTGA+GGG | + | chr8.3:30995155-30995174 | MS.gene067981:intron | 35.0% | |
| CTGCATCAAACACCAATTAA+GGG | - | chr8.3:30995834-30995853 | None:intergenic | 35.0% | |
| GAAATTGTTCCATCATACCT+CGG | - | chr8.3:30996211-30996230 | None:intergenic | 35.0% | |
| GAGTGAAATCCACATAACAA+AGG | - | chr8.3:30995292-30995311 | None:intergenic | 35.0% | |
| GTCGTAACGAATATTTGCAT+AGG | - | chr8.3:30995587-30995606 | None:intergenic | 35.0% | |
| GTTATGTGGATTTCACTCTT+TGG | + | chr8.3:30995294-30995313 | MS.gene067981:intron | 35.0% | |
| TCTGCATCAAACACCAATTA+AGG | - | chr8.3:30995835-30995854 | None:intergenic | 35.0% | |
| TGCAAATCAGGACAAACTAA+TGG | + | chr8.3:30994911-30994930 | MS.gene067981:intron | 35.0% | |
| TGTATCCTGCATATTGTTTC+AGG | + | chr8.3:30996092-30996111 | MS.gene067981:intron | 35.0% | |
| TTCTCTATAGGTCTGCTTTA+CGG | + | chr8.3:30995542-30995561 | MS.gene067981:intron | 35.0% | |
| TTGTGTTTGTTCATGAAGGT+TGG | + | chr8.3:30993893-30993912 | MS.gene067981:intron | 35.0% | |
| TTTCCCTTAGTTCCCTTAAT+TGG | + | chr8.3:30995819-30995838 | MS.gene067981:intron | 35.0% | |
| ! | AAAGCTTCATGACATGGTTT+TGG | + | chr8.3:30995246-30995265 | MS.gene067981:intron | 35.0% |
| ! | CAGCAGCATTAAACATCTTT+TGG | - | chr8.3:30993658-30993677 | None:intergenic | 35.0% |
| ! | CTTCAATGATTTGTGTATGG+AGG | + | chr8.3:30994668-30994687 | MS.gene067981:intron | 35.0% |
| ! | CTTTAGGTTCCTTTGTTATG+TGG | + | chr8.3:30995280-30995299 | MS.gene067981:intron | 35.0% |
| ! | GCATAAGCAGCTAATTCTTT+TGG | + | chr8.3:30995023-30995042 | MS.gene067981:intron | 35.0% |
| ! | GGAATTTTGAACTTCATTGG+TGG | + | chr8.3:30994350-30994369 | MS.gene067981:intron | 35.0% |
| ! | TGATTTTCGCAACTTCCTTA+TGG | + | chr8.3:30995471-30995490 | MS.gene067981:intron | 35.0% |
| !! | CACTTTTAGGTCATTGCTTT+AGG | + | chr8.3:30994874-30994893 | MS.gene067981:intron | 35.0% |
| !!! | CTTTCTTTTTCAGAATGCCT+AGG | + | chr8.3:30995965-30995984 | MS.gene067981:intron | 35.0% |
| AAATTGGAAATGCAAGGGAC+AGG | + | chr8.3:30996296-30996315 | MS.gene067981:intron | 40.0% | |
| AGATATCTAAGTTCTCCAGC+AGG | - | chr8.3:30995947-30995966 | None:intergenic | 40.0% | |
| ATAGACATTGAGGTAGGACT+TGG | + | chr8.3:30995920-30995939 | MS.gene067981:intron | 40.0% | |
| ATCTTGCATGGTCCTGTTTA+AGG | + | chr8.3:30994195-30994214 | MS.gene067981:intron | 40.0% | |
| CCTTATGATGTCACCATAAG+CGG | + | chr8.3:30996339-30996358 | MS.gene067981:CDS | 40.0% | |
| CGCTTATGGTGACATCATAA+GGG | - | chr8.3:30996341-30996360 | None:intergenic | 40.0% | |
| CTACTGATAGACATTGAGGT+AGG | + | chr8.3:30995914-30995933 | MS.gene067981:intron | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | + | chr8.3:30993491-30993510 | MS.gene067981:intron | 40.0% | |
| GAATATTTGCATAGGCAACG+CGG | - | chr8.3:30995579-30995598 | None:intergenic | 40.0% | |
| GATATCTAAGTTCTCCAGCA+GGG | - | chr8.3:30995946-30995965 | None:intergenic | 40.0% | |
| GATTACTCTGCTACAAGTGA+TGG | + | chr8.3:30995145-30995164 | MS.gene067981:intron | 40.0% | |
| GCTACAAGTGATGGTTATTG+AGG | + | chr8.3:30995154-30995173 | MS.gene067981:intron | 40.0% | |
| GCTTTACTCATGATGCTGAA+AGG | + | chr8.3:30996145-30996164 | MS.gene067981:CDS | 40.0% | |
| GGCAAGCAGAGATAAAAACT+TGG | - | chr8.3:30993697-30993716 | None:intergenic | 40.0% | |
| GTGAGTCTTCACATACACTA+AGG | - | chr8.3:30994574-30994593 | None:intergenic | 40.0% | |
| TGAACAAAAGGATGGATCAG+TGG | + | chr8.3:30993354-30993373 | MS.gene067981:intron | 40.0% | |
| TGAGCTACTGATAGACATTG+AGG | + | chr8.3:30995910-30995929 | MS.gene067981:CDS | 40.0% | |
| TTGGTGAAAGCTTCATGACA+TGG | + | chr8.3:30995240-30995259 | MS.gene067981:intron | 40.0% | |
| TTGTGCACACAGAACCAAAA+GGG | - | chr8.3:30993470-30993489 | None:intergenic | 40.0% | |
| ! | AACCATGCTGACTACCTAAA+AGG | - | chr8.3:30994816-30994835 | None:intergenic | 40.0% |
| ! | ACTTCATTGGTGGTTGAAGT+AGG | + | chr8.3:30994360-30994379 | MS.gene067981:intron | 40.0% |
| ! | CTAGATGGCATTCACCTTTT+AGG | + | chr8.3:30994799-30994818 | MS.gene067981:intron | 40.0% |
| !! | TTTTTCAGAATGCCTAGGCT+GGG | + | chr8.3:30995970-30995989 | MS.gene067981:intron | 40.0% |
| AAACAGCATCTCGTCTTTCG+CGG | + | chr8.3:30995320-30995339 | MS.gene067981:intron | 45.0% | |
| AAGGCACGTTCGAAGAAACA+AGG | + | chr8.3:30993415-30993434 | MS.gene067981:intron | 45.0% | |
| ACAAAAGGATGGATCAGTGG+TGG | + | chr8.3:30993357-30993376 | MS.gene067981:intron | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | + | chr8.3:30993443-30993462 | MS.gene067981:intron | 45.0% | |
| AGCAGCCTGAAACAATATGC+AGG | - | chr8.3:30996100-30996119 | None:intergenic | 45.0% | |
| AGGCACGTTCGAAGAAACAA+GGG | + | chr8.3:30993416-30993435 | MS.gene067981:intron | 45.0% | |
| AGGTGATGCATCACAGAGAA+TGG | + | chr8.3:30993561-30993580 | MS.gene067981:intron | 45.0% | |
| ATATCTGGCCTCACTAATCC+TGG | - | chr8.3:30996370-30996389 | None:intergenic | 45.0% | |
| CCGCTTATGGTGACATCATA+AGG | - | chr8.3:30996342-30996361 | None:intergenic | 45.0% | |
| CGCGGTTTCTTGGTAAAACA+GGG | + | chr8.3:30995338-30995357 | MS.gene067981:intron | 45.0% | |
| CTTGTGCACACAGAACCAAA+AGG | - | chr8.3:30993471-30993490 | None:intergenic | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | + | chr8.3:30993426-30993445 | MS.gene067981:intron | 45.0% | |
| TATGGTGACATCATAAGGGC+TGG | - | chr8.3:30996337-30996356 | None:intergenic | 45.0% | |
| TCGCGGTTTCTTGGTAAAAC+AGG | + | chr8.3:30995337-30995356 | MS.gene067981:intron | 45.0% | |
| TTGCGTGCTGAACAAAAGGA+TGG | + | chr8.3:30993346-30993365 | MS.gene067981:intron | 45.0% | |
| ! | CAGTCTTATAAGCGTGTACG+TGG | + | chr8.3:30996177-30996196 | MS.gene067981:CDS | 45.0% |
| ! | TGTGGATTTGAGGACCCTTT+TGG | + | chr8.3:30993453-30993472 | MS.gene067981:intron | 45.0% |
| !! | ACACAGGTTGGTGAACTTGA+TGG | + | chr8.3:30993388-30993407 | MS.gene067981:intron | 45.0% |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | + | chr8.3:30993541-30993560 | MS.gene067981:intron | 45.0% |
| !! | AGGTGGTTTTTGCCACTTGA+AGG | + | chr8.3:30994281-30994300 | MS.gene067981:intron | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | + | chr8.3:30993392-30993411 | MS.gene067981:intron | 45.0% |
| !! | CACCTTTTAGGTAGTCAGCA+TGG | + | chr8.3:30994811-30994830 | MS.gene067981:intron | 45.0% |
| !! | TGGTTTTTGCCACTTGAAGG+TGG | + | chr8.3:30994284-30994303 | MS.gene067981:intron | 45.0% |
| !!! | CTTTTTCAGAATGCCTAGGC+TGG | + | chr8.3:30995969-30995988 | MS.gene067981:intron | 45.0% |
| !! | AAAAAAAAAATATTGAAATA+TGG | - | chr8.3:30993952-30993971 | None:intergenic | 5.0% |
| !!! | CAATATTTTTTTTTTATTTA+TGG | + | chr8.3:30993957-30993976 | MS.gene067981:intron | 5.0% |
| AATCCTGGACTCACCGCTTA+TGG | - | chr8.3:30996355-30996374 | None:intergenic | 50.0% | |
| ACCATCTGGAGAAGAAGAGG+AGG | - | chr8.3:30995400-30995419 | None:intergenic | 50.0% | |
| ACCTCCTCTTCTTCTCCAGA+TGG | + | chr8.3:30995396-30995415 | MS.gene067981:intron | 50.0% | |
| ATAGGCAACGCGGAGTTTGA+AGG | - | chr8.3:30995569-30995588 | None:intergenic | 50.0% | |
| ATGCGATTGAAGCGCATGGT+TGG | + | chr8.3:30993599-30993618 | MS.gene067981:intron | 50.0% | |
| CACGTTCGAAGAAACAAGGG+AGG | + | chr8.3:30993419-30993438 | MS.gene067981:intron | 50.0% | |
| CGAACCATCTGGAGAAGAAG+AGG | - | chr8.3:30995403-30995422 | None:intergenic | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | + | chr8.3:30993425-30993444 | MS.gene067981:intron | 50.0% | |
| CTCTGTGATGCATCACCTGA+AGG | - | chr8.3:30993559-30993578 | None:intergenic | 50.0% | |
| CTTATAAGCGTGTACGTGGC+AGG | + | chr8.3:30996181-30996200 | MS.gene067981:CDS | 50.0% | |
| GCTTATGCCCTCTACAACCA+AGG | - | chr8.3:30995011-30995030 | None:intergenic | 50.0% | |
| GGCTGGGTATTTCCTGGTAT+TGG | + | chr8.3:30995986-30996005 | MS.gene067981:intron | 50.0% | |
| GTCGTTGCGTGCTGAACAAA+AGG | + | chr8.3:30993342-30993361 | MS.gene067981:intron | 50.0% | |
| GTGGAGAGTAGAACACAGGT+TGG | + | chr8.3:30993376-30993395 | MS.gene067981:intron | 50.0% | |
| TACCAGGAAATACCCAGCCT+AGG | - | chr8.3:30995985-30996004 | None:intergenic | 50.0% | |
| TCCTTGAGACCACCTTCAAG+TGG | - | chr8.3:30994296-30994315 | None:intergenic | 50.0% | |
| TCTCGTCTTTCGCGGTTTCT+TGG | + | chr8.3:30995328-30995347 | MS.gene067981:intron | 50.0% | |
| TGAAGGTGGTCTCAAGGACA+AGG | + | chr8.3:30994298-30994317 | MS.gene067981:intron | 50.0% | |
| TGCGATTGAAGCGCATGGTT+GGG | + | chr8.3:30993600-30993619 | MS.gene067981:intron | 50.0% | |
| TGGTGAACTTGATGGAGGGA+AGG | + | chr8.3:30993396-30993415 | MS.gene067981:intron | 50.0% | |
| ! | AGTGGTGGAGAGTAGAACAC+AGG | + | chr8.3:30993372-30993391 | MS.gene067981:intron | 50.0% |
| !! | CAGGTTGGTGAACTTGATGG+AGG | + | chr8.3:30993391-30993410 | MS.gene067981:intron | 50.0% |
| !! | CTTTGGAGTCACGAACCATC+TGG | - | chr8.3:30995414-30995433 | None:intergenic | 50.0% |
| AGCCAACAAGCTTGCAGGAC+TGG | + | chr8.3:30994951-30994970 | MS.gene067981:intron | 55.0% | |
| AGGGAGGAAGAGGGATGTTG+TGG | + | chr8.3:30993435-30993454 | MS.gene067981:intron | 55.0% | |
| CTACCAGCCAACAAGCTTGC+AGG | + | chr8.3:30994946-30994965 | MS.gene067981:intron | 55.0% | |
| CTCCAGTCCTGCAAGCTTGT+TGG | - | chr8.3:30994956-30994975 | None:intergenic | 55.0% | |
| GCCACTTGAAGGTGGTCTCA+AGG | + | chr8.3:30994292-30994311 | MS.gene067981:intron | 55.0% | |
| GCGAATGCGATTGAAGCGCA+TGG | + | chr8.3:30993595-30993614 | MS.gene067981:intron | 55.0% | |
| GCGATTGAAGCGCATGGTTG+GGG | + | chr8.3:30993601-30993620 | MS.gene067981:intron | 55.0% | |
| TCACCATAAGCGGTGAGTCC+AGG | + | chr8.3:30996349-30996368 | MS.gene067981:CDS | 55.0% | |
| TGCCCTCTACAACCAAGGTG+CGG | - | chr8.3:30995006-30995025 | None:intergenic | 55.0% | |
| TGCCTAGGCTGGGTATTTCC+TGG | + | chr8.3:30995980-30995999 | MS.gene067981:intron | 55.0% | |
| ! | ATAAGGGCTGGTGCACCTAC+TGG | - | chr8.3:30996325-30996344 | None:intergenic | 55.0% |
| ! | CGGTGAGTCCAGGATTAGTG+AGG | + | chr8.3:30996359-30996378 | MS.gene067981:CDS | 55.0% |
| ! | GCAGGTTGACCGAGGTATGA+TGG | + | chr8.3:30996199-30996218 | MS.gene067981:intron | 55.0% |
| !! | AGTCCTGCAAGCTTGTTGGC+TGG | - | chr8.3:30994952-30994971 | None:intergenic | 55.0% |
| ACGCCGCACCTTGGTTGTAG+AGG | + | chr8.3:30995000-30995019 | MS.gene067981:intron | 60.0% | |
| ACGTCTGTAACGCCGCACCT+TGG | + | chr8.3:30994991-30995010 | MS.gene067981:intron | 60.0% | |
| CGCCGCACCTTGGTTGTAGA+GGG | + | chr8.3:30995001-30995020 | MS.gene067981:intron | 60.0% | |
| GCAAGGGACAGGCTTCCAGT+AGG | + | chr8.3:30996307-30996326 | MS.gene067981:intron | 60.0% | |
| TTGAAGCGCATGGTTGGGGC+TGG | + | chr8.3:30993605-30993624 | MS.gene067981:intron | 60.0% | |
| ! | TGTACGTGGCAGGTTGACCG+AGG | + | chr8.3:30996191-30996210 | MS.gene067981:CDS | 60.0% |
| GAGGTAGGACTTGGCCCTGC+TGG | + | chr8.3:30995929-30995948 | MS.gene067981:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 30993277 | 30996398 | 30993277 | ID=MS.gene067981 |
| chr8.3 | mRNA | 30993277 | 30996398 | 30993277 | ID=MS.gene067981.t1;Parent=MS.gene067981 |
| chr8.3 | exon | 30993277 | 30993288 | 30993277 | ID=MS.gene067981.t1.exon1;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30993277 | 30993288 | 30993277 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| chr8.3 | exon | 30994089 | 30994145 | 30994089 | ID=MS.gene067981.t1.exon2;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30994089 | 30994145 | 30994089 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| chr8.3 | exon | 30995415 | 30995446 | 30995415 | ID=MS.gene067981.t1.exon3;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30995415 | 30995446 | 30995415 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| chr8.3 | exon | 30995829 | 30995931 | 30995829 | ID=MS.gene067981.t1.exon4;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30995829 | 30995931 | 30995829 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| chr8.3 | exon | 30996114 | 30996212 | 30996114 | ID=MS.gene067981.t1.exon5;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30996114 | 30996212 | 30996114 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| chr8.3 | exon | 30996318 | 30996398 | 30996318 | ID=MS.gene067981.t1.exon6;Parent=MS.gene067981.t1 |
| chr8.3 | CDS | 30996318 | 30996398 | 30996318 | ID=cds.MS.gene067981.t1;Parent=MS.gene067981.t1 |
| Gene Sequence |
| Protein sequence |
