Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068083.t1 | XP_024625164.1 | 96.9 | 289 | 9 | 0 | 1 | 289 | 129 | 417 | 3.40E-154 | 554.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068083.t1 | Q689D6 | 43.2 | 243 | 126 | 3 | 18 | 248 | 148 | 390 | 3.1e-47 | 190.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068083.t1 | G7L4S6 | 96.9 | 289 | 9 | 0 | 1 | 289 | 129 | 417 | 2.4e-154 | 554.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055711 | MS.gene068083 | 0.858399 | 8.46E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068083 | MS.gene05082 | PPI |
| MS.gene068083 | MS.gene008389 | PPI |
| MS.gene068083 | MS.gene049632 | PPI |
| MS.gene068083 | MS.gene55679 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068083.t1 | MTR_7g088530 | 96.886 | 289 | 9 | 0 | 1 | 289 | 129 | 417 | 0.0 | 565 |
| MS.gene068083.t1 | MTR_3g063230 | 46.444 | 239 | 116 | 4 | 19 | 245 | 153 | 391 | 5.95e-64 | 207 |
| MS.gene068083.t1 | MTR_6g033595 | 45.455 | 242 | 120 | 4 | 19 | 248 | 149 | 390 | 6.65e-59 | 195 |
| MS.gene068083.t1 | MTR_3g063230 | 42.259 | 239 | 102 | 5 | 19 | 245 | 153 | 367 | 3.30e-52 | 176 |
| MS.gene068083.t1 | MTR_2g067960 | 42.562 | 242 | 127 | 4 | 19 | 248 | 114 | 355 | 1.55e-51 | 175 |
| MS.gene068083.t1 | MTR_3g105530 | 36.996 | 273 | 147 | 8 | 5 | 260 | 121 | 385 | 1.02e-42 | 151 |
| MS.gene068083.t1 | MTR_8g089370 | 34.413 | 247 | 152 | 4 | 8 | 246 | 130 | 374 | 3.38e-36 | 133 |
| MS.gene068083.t1 | MTR_1g032040 | 31.439 | 264 | 172 | 3 | 8 | 265 | 128 | 388 | 2.16e-34 | 129 |
| MS.gene068083.t1 | MTR_1g032380 | 31.439 | 264 | 172 | 3 | 8 | 265 | 128 | 388 | 2.16e-34 | 129 |
| MS.gene068083.t1 | MTR_7g117270 | 32.632 | 285 | 183 | 4 | 3 | 278 | 170 | 454 | 2.32e-34 | 130 |
| MS.gene068083.t1 | MTR_1g072550 | 31.086 | 267 | 175 | 3 | 8 | 268 | 128 | 391 | 2.37e-34 | 129 |
| MS.gene068083.t1 | MTR_7g107280 | 30.204 | 245 | 162 | 3 | 8 | 243 | 122 | 366 | 5.12e-34 | 128 |
| MS.gene068083.t1 | MTR_6g043850 | 32.301 | 226 | 145 | 3 | 18 | 240 | 131 | 351 | 1.02e-32 | 127 |
| MS.gene068083.t1 | MTR_0153s0070 | 35.814 | 215 | 113 | 7 | 5 | 201 | 128 | 335 | 8.86e-30 | 115 |
| MS.gene068083.t1 | MTR_1g019170 | 30.588 | 255 | 159 | 3 | 1 | 249 | 101 | 343 | 6.37e-29 | 114 |
| MS.gene068083.t1 | MTR_3g029990 | 30.588 | 255 | 159 | 3 | 1 | 249 | 101 | 343 | 9.52e-29 | 115 |
| MS.gene068083.t1 | MTR_3g029990 | 30.588 | 255 | 159 | 3 | 1 | 249 | 101 | 343 | 1.21e-28 | 115 |
| MS.gene068083.t1 | MTR_3g030020 | 30.196 | 255 | 160 | 3 | 1 | 249 | 58 | 300 | 1.24e-28 | 112 |
| MS.gene068083.t1 | MTR_1g098960 | 30.962 | 239 | 147 | 3 | 1 | 233 | 103 | 329 | 9.41e-28 | 111 |
| MS.gene068083.t1 | MTR_0153s0070 | 31.852 | 270 | 125 | 9 | 5 | 256 | 98 | 326 | 6.95e-27 | 108 |
| MS.gene068083.t1 | MTR_4g053720 | 31.646 | 237 | 137 | 6 | 13 | 233 | 120 | 347 | 1.75e-26 | 107 |
| MS.gene068083.t1 | MTR_3g083350 | 31.278 | 227 | 147 | 6 | 19 | 240 | 168 | 390 | 1.38e-23 | 100 |
| MS.gene068083.t1 | MTR_3g074730 | 29.339 | 242 | 147 | 7 | 1 | 228 | 140 | 371 | 9.51e-21 | 91.7 |
| MS.gene068083.t1 | MTR_7g018630 | 28.413 | 271 | 168 | 7 | 8 | 262 | 142 | 402 | 1.61e-19 | 88.2 |
| MS.gene068083.t1 | MTR_3g448960 | 25.833 | 240 | 133 | 6 | 1 | 233 | 103 | 304 | 1.10e-14 | 74.3 |
| MS.gene068083.t1 | MTR_8g102038 | 29.885 | 174 | 97 | 6 | 13 | 170 | 74 | 238 | 1.18e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068083.t1 | AT5G45790 | 63.194 | 288 | 100 | 3 | 1 | 283 | 66 | 352 | 2.23e-122 | 354 |
| MS.gene068083.t1 | AT5G45790 | 63.194 | 288 | 100 | 3 | 1 | 283 | 151 | 437 | 1.84e-121 | 355 |
| MS.gene068083.t1 | AT1G06440 | 47.479 | 238 | 113 | 4 | 19 | 244 | 137 | 374 | 3.05e-63 | 204 |
| MS.gene068083.t1 | AT4G33495 | 43.621 | 243 | 125 | 4 | 18 | 248 | 148 | 390 | 3.36e-57 | 189 |
| MS.gene068083.t1 | AT5G48040 | 38.866 | 247 | 135 | 4 | 8 | 246 | 132 | 370 | 4.03e-43 | 152 |
| MS.gene068083.t1 | AT3G58520 | 32.941 | 255 | 143 | 5 | 8 | 243 | 113 | 358 | 1.21e-39 | 143 |
| MS.gene068083.t1 | AT3G58520 | 32.941 | 255 | 143 | 5 | 8 | 243 | 125 | 370 | 1.65e-39 | 143 |
| MS.gene068083.t1 | AT4G01037 | 35.060 | 251 | 153 | 5 | 3 | 244 | 162 | 411 | 2.31e-36 | 136 |
| MS.gene068083.t1 | AT5G21970 | 34.286 | 245 | 146 | 4 | 18 | 252 | 155 | 394 | 4.46e-36 | 134 |
| MS.gene068083.t1 | AT5G21970 | 34.286 | 245 | 146 | 4 | 18 | 252 | 155 | 394 | 4.46e-36 | 134 |
| MS.gene068083.t1 | AT1G79120 | 34.667 | 225 | 133 | 3 | 19 | 229 | 160 | 384 | 4.73e-34 | 128 |
| MS.gene068083.t1 | AT1G79120 | 34.667 | 225 | 133 | 3 | 19 | 229 | 160 | 384 | 4.73e-34 | 128 |
| MS.gene068083.t1 | AT1G71850 | 31.111 | 270 | 167 | 5 | 19 | 277 | 134 | 395 | 1.02e-32 | 125 |
| MS.gene068083.t1 | AT2G31290 | 32.549 | 255 | 142 | 4 | 1 | 243 | 108 | 344 | 2.33e-31 | 121 |
| MS.gene068083.t1 | AT2G31290 | 32.549 | 255 | 142 | 4 | 1 | 243 | 108 | 344 | 2.33e-31 | 121 |
| MS.gene068083.t1 | AT4G24320 | 31.818 | 264 | 164 | 5 | 19 | 270 | 127 | 386 | 2.86e-28 | 112 |
| MS.gene068083.t1 | AT3G63090 | 28.992 | 238 | 161 | 2 | 8 | 240 | 131 | 365 | 5.00e-28 | 112 |
| MS.gene068083.t1 | AT5G62990 | 31.429 | 245 | 153 | 6 | 1 | 240 | 158 | 392 | 3.31e-24 | 102 |
| MS.gene068083.t1 | AT2G39120 | 31.395 | 258 | 158 | 7 | 3 | 247 | 117 | 368 | 3.21e-23 | 98.2 |
| MS.gene068083.t1 | AT4G08940 | 26.923 | 234 | 158 | 5 | 1 | 228 | 148 | 374 | 1.03e-15 | 77.0 |
Find 79 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCCGGTTGGAAAATTTAT+TGG | 0.170400 | 7.3:+20920450 | None:intergenic |
| ATGTTGGAGCTTGTGTTATT+AGG | 0.181468 | 7.3:-20920072 | MS.gene068083:CDS |
| TAAGATTGAGAGAGGGTTTA+GGG | 0.240031 | 7.3:-20920427 | MS.gene068083:CDS |
| GGTTGGTTGGGACGATGAAT+TGG | 0.282172 | 7.3:-20920553 | MS.gene068083:CDS |
| ATGAGGTTGAGGTTGTTAAA+AGG | 0.287196 | 7.3:-20920734 | MS.gene068083:CDS |
| TGATTGGGTGATTCCGTTCT+TGG | 0.292868 | 7.3:-20919950 | MS.gene068083:CDS |
| TTAAGATTGAGAGAGGGTTT+AGG | 0.303009 | 7.3:-20920428 | MS.gene068083:CDS |
| TGAGTTTAAGTTGGTTGATT+TGG | 0.304197 | 7.3:-20920589 | MS.gene068083:CDS |
| TGTTGGAGCTTGTGTTATTA+GGG | 0.309712 | 7.3:-20920071 | MS.gene068083:CDS |
| GAGGTTGATCAGAAGAGAAT+TGG | 0.313244 | 7.3:-20920658 | MS.gene068083:CDS |
| CATTGTGGGGTTGGTTGGTT+GGG | 0.326592 | 7.3:-20920565 | MS.gene068083:CDS |
| GAGTTTGACTGTGGAGAAAA+TGG | 0.348977 | 7.3:-20920286 | MS.gene068083:CDS |
| TGATTTGGACATTGTGGGGT+TGG | 0.355504 | 7.3:-20920574 | MS.gene068083:CDS |
| GATTTCAGAGAATCCATTCT+TGG | 0.361428 | 7.3:-20920624 | MS.gene068083:CDS |
| CGCTTCATTTGCATGCTTTG+AGG | 0.362675 | 7.3:-20920677 | MS.gene068083:CDS |
| TTGGACATTGTGGGGTTGGT+TGG | 0.365339 | 7.3:-20920570 | MS.gene068083:CDS |
| GTTGGTTGGGACGATGAATT+GGG | 0.377034 | 7.3:-20920552 | MS.gene068083:CDS |
| AATGGTTGAGGTTGATCAAT+TGG | 0.380904 | 7.3:-20920268 | MS.gene068083:CDS |
| CTCAGGGAGGCTTATGAGAA+AGG | 0.394166 | 7.3:-20920138 | MS.gene068083:CDS |
| TACAGCATTGCTCTCTTCCT+TGG | 0.400352 | 7.3:+20920008 | None:intergenic |
| GATGAAGGAGTTGATATTGT+TGG | 0.411641 | 7.3:-20920778 | MS.gene068083:CDS |
| ACATTGTGGGGTTGGTTGGT+TGG | 0.415442 | 7.3:-20920566 | MS.gene068083:CDS |
| GAGGTAAAAGAGAAGGTGAT+TGG | 0.417799 | 7.3:-20919966 | MS.gene068083:CDS |
| ACAAGAAGCTAACAACTGTT+TGG | 0.418330 | 7.3:+20920038 | None:intergenic |
| AGGGTTTAGGGAAAAGTTGA+AGG | 0.426775 | 7.3:-20920415 | MS.gene068083:CDS |
| AGAGAGAGTACAAAGAGAAA+TGG | 0.428706 | 7.3:-20920503 | MS.gene068083:CDS |
| CGAGTTACTCCTTAGGCATC+CGG | 0.438028 | 7.3:-20920205 | MS.gene068083:CDS |
| ATTTATTGGAAAAGCAAACT+TGG | 0.439418 | 7.3:+20920464 | None:intergenic |
| AGGTTGATCAGAAGAGAATT+GGG | 0.442727 | 7.3:-20920657 | MS.gene068083:CDS |
| TTGGTTGATTTGGACATTGT+GGG | 0.443311 | 7.3:-20920579 | MS.gene068083:CDS |
| ATTTCAGAGAATCCATTCTT+GGG | 0.446471 | 7.3:-20920623 | MS.gene068083:CDS |
| CGAACTTCATACACCGGATT+AGG | 0.447375 | 7.3:+20920102 | None:intergenic |
| TGAGGTTGAGGTTGTTAAAA+GGG | 0.448306 | 7.3:-20920733 | MS.gene068083:CDS |
| GTTGGTTGATTTGGACATTG+TGG | 0.448621 | 7.3:-20920580 | MS.gene068083:CDS |
| ATATAGTGATGAGTTTAAGT+TGG | 0.478341 | 7.3:-20920598 | MS.gene068083:CDS |
| AGGTAAAAGAGAAGGTGATT+GGG | 0.493014 | 7.3:-20919965 | MS.gene068083:CDS |
| CTCTCAATCTTAAACCCGGT+TGG | 0.493976 | 7.3:+20920438 | None:intergenic |
| TTGGGTGATTCCGTTCTTGG+AGG | 0.495605 | 7.3:-20919947 | MS.gene068083:CDS |
| AGGGTTGATTGAGCCTAATC+CGG | 0.502812 | 7.3:-20920115 | MS.gene068083:CDS |
| ATCACTATATCTCCCAAGAA+TGG | 0.505124 | 7.3:+20920611 | None:intergenic |
| GACTGTGGAGAAAATGGTTG+AGG | 0.510514 | 7.3:-20920280 | MS.gene068083:CDS |
| GGAGTTGATATTGTTGGAAG+AGG | 0.511941 | 7.3:-20920772 | MS.gene068083:CDS |
| TGAAGTTCGTAGAAATATGT+TGG | 0.520781 | 7.3:-20920088 | MS.gene068083:CDS |
| TTAAGTGTGGTGGGGTTCAG+AGG | 0.525566 | 7.3:-20920347 | MS.gene068083:CDS |
| GAATGGCGCTTGTTGAGGAA+TGG | 0.529453 | 7.3:-20920530 | MS.gene068083:CDS |
| CCCTCTCTCAATCTTAAACC+CGG | 0.530721 | 7.3:+20920434 | None:intergenic |
| TTAGGGAAAAGTTGAAGGGT+TGG | 0.539829 | 7.3:-20920410 | MS.gene068083:CDS |
| AGCTTCTTGTGATGAATCCA+AGG | 0.542578 | 7.3:-20920025 | MS.gene068083:CDS |
| GAGTTACTCCTTAGGCATCC+GGG | 0.542983 | 7.3:-20920204 | MS.gene068083:CDS |
| TGGTTGATTTGGACATTGTG+GGG | 0.558106 | 7.3:-20920578 | MS.gene068083:CDS |
| TTCTCATTAGCCTCCAAGAA+CGG | 0.559860 | 7.3:+20919937 | None:intergenic |
| TTGGGACGATGAATTGGGAA+TGG | 0.561957 | 7.3:-20920547 | MS.gene068083:CDS |
| AAAATATCCCCGGATGCCTA+AGG | 0.562970 | 7.3:+20920196 | None:intergenic |
| GGGTTTAGGGAAAAGTTGAA+GGG | 0.563298 | 7.3:-20920414 | MS.gene068083:CDS |
| GTAGATATGTAAAATATCCC+CGG | 0.567673 | 7.3:+20920186 | None:intergenic |
| AAAAGTTGAAGGGTTGGCAA+AGG | 0.572365 | 7.3:-20920404 | MS.gene068083:CDS |
| GGCGCTTGTTGAGGAATGGA+GGG | 0.582319 | 7.3:-20920526 | MS.gene068083:CDS |
| TTTCTACGAACTTCATACAC+CGG | 0.585037 | 7.3:+20920096 | None:intergenic |
| TGGCGCTTGTTGAGGAATGG+AGG | 0.587828 | 7.3:-20920527 | MS.gene068083:CDS |
| TTGCTTATGATGTCGGTGAA+TGG | 0.588157 | 7.3:-20920702 | MS.gene068083:CDS |
| CTGTAGTCTATGAAGTGGAT+GGG | 0.589627 | 7.3:-20919990 | MS.gene068083:CDS |
| ACCGGGTTTAAGATTGAGAG+AGG | 0.590903 | 7.3:-20920435 | MS.gene068083:CDS |
| ATGGATTCTCTGAAATCACT+AGG | 0.592317 | 7.3:+20920630 | None:intergenic |
| ATGTGCGCGAGTTACTCCTT+AGG | 0.602697 | 7.3:-20920212 | MS.gene068083:CDS |
| ATTGGGAATGGCGCTTGTTG+AGG | 0.606683 | 7.3:-20920535 | MS.gene068083:CDS |
| GGGAGGCTTATGAGAAAGGA+GGG | 0.607467 | 7.3:-20920134 | MS.gene068083:CDS |
| GGTTCAGAGGTATGAGAAGA+GGG | 0.608105 | 7.3:-20920334 | MS.gene068083:CDS |
| GCTGTAGTCTATGAAGTGGA+TGG | 0.611508 | 7.3:-20919991 | MS.gene068083:CDS |
| AGGGAGGCTTATGAGAAAGG+AGG | 0.624503 | 7.3:-20920135 | MS.gene068083:CDS |
| TGTGAGACAACATGAGGTTG+AGG | 0.624520 | 7.3:-20920745 | MS.gene068083:CDS |
| CAATGCTGTAGTCTATGAAG+TGG | 0.626112 | 7.3:-20919995 | MS.gene068083:CDS |
| TGTAGTCTATGAAGTGGATG+GGG | 0.628618 | 7.3:-20919989 | MS.gene068083:CDS |
| GAAGAAGTTGCTTATGATGT+CGG | 0.631934 | 7.3:-20920709 | MS.gene068083:CDS |
| CCGGGTTTAAGATTGAGAGA+GGG | 0.633078 | 7.3:-20920434 | MS.gene068083:CDS |
| GGGTTCAGAGGTATGAGAAG+AGG | 0.636662 | 7.3:-20920335 | MS.gene068083:CDS |
| TGAGCTGTTGAGTTTGACTG+TGG | 0.649610 | 7.3:-20920295 | MS.gene068083:CDS |
| GTAGTCTATGAAGTGGATGG+GGG | 0.660117 | 7.3:-20919988 | MS.gene068083:CDS |
| AGTTACTCCTTAGGCATCCG+GGG | 0.713199 | 7.3:-20920203 | MS.gene068083:CDS |
| GGTTGTTGTGAGACAACATG+AGG | 0.740042 | 7.3:-20920751 | MS.gene068083:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTACATATCTACAAA+AGG | - | chr7.3:20920527-20920546 | MS.gene068083:CDS | 15.0% |
| !!! | TTAACATTTTTTCTCTCATA+AGG | + | chr7.3:20920344-20920363 | None:intergenic | 20.0% |
| ! | ATATAGTGATGAGTTTAAGT+TGG | - | chr7.3:20920109-20920128 | MS.gene068083:CDS | 25.0% |
| ! | ATTTATTGGAAAAGCAAACT+TGG | + | chr7.3:20920246-20920265 | None:intergenic | 25.0% |
| !! | TTTCCAATAAATTTTCCAAC+CGG | - | chr7.3:20920254-20920273 | MS.gene068083:CDS | 25.0% |
| AAAAAATGTTAAGTGTGGTG+GGG | - | chr7.3:20920352-20920371 | MS.gene068083:CDS | 30.0% | |
| AGAAAAAATGTTAAGTGTGG+TGG | - | chr7.3:20920350-20920369 | MS.gene068083:CDS | 30.0% | |
| ATTTCAGAGAATCCATTCTT+GGG | - | chr7.3:20920084-20920103 | MS.gene068083:CDS | 30.0% | |
| GAAAAAATGTTAAGTGTGGT+GGG | - | chr7.3:20920351-20920370 | MS.gene068083:CDS | 30.0% | |
| GAGAGAAAAAATGTTAAGTG+TGG | - | chr7.3:20920347-20920366 | MS.gene068083:CDS | 30.0% | |
| GTAGATATGTAAAATATCCC+CGG | + | chr7.3:20920524-20920543 | None:intergenic | 30.0% | |
| TGAAGTTCGTAGAAATATGT+TGG | - | chr7.3:20920619-20920638 | MS.gene068083:CDS | 30.0% | |
| ! | TTCCAATAAATTTTCCAACC+GGG | - | chr7.3:20920255-20920274 | MS.gene068083:CDS | 30.0% |
| !! | TGAGTTTAAGTTGGTTGATT+TGG | - | chr7.3:20920118-20920137 | MS.gene068083:CDS | 30.0% |
| AACCCGGTTGGAAAATTTAT+TGG | + | chr7.3:20920260-20920279 | None:intergenic | 35.0% | |
| ACAAGAAGCTAACAACTGTT+TGG | + | chr7.3:20920672-20920691 | None:intergenic | 35.0% | |
| AGGTAAAAGAGAAGGTGATT+GGG | - | chr7.3:20920742-20920761 | MS.gene068083:CDS | 35.0% | |
| ATCACTATATCTCCCAAGAA+TGG | + | chr7.3:20920099-20920118 | None:intergenic | 35.0% | |
| ATGAGGTTGAGGTTGTTAAA+AGG | - | chr7.3:20919973-20919992 | MS.gene068083:CDS | 35.0% | |
| GAAGAAGTTGCTTATGATGT+CGG | - | chr7.3:20919998-20920017 | MS.gene068083:CDS | 35.0% | |
| GATTTCAGAGAATCCATTCT+TGG | - | chr7.3:20920083-20920102 | MS.gene068083:CDS | 35.0% | |
| TAAGATTGAGAGAGGGTTTA+GGG | - | chr7.3:20920280-20920299 | MS.gene068083:CDS | 35.0% | |
| TGAGGTTGAGGTTGTTAAAA+GGG | - | chr7.3:20919974-20919993 | MS.gene068083:CDS | 35.0% | |
| TTAAGATTGAGAGAGGGTTT+AGG | - | chr7.3:20920279-20920298 | MS.gene068083:CDS | 35.0% | |
| TTTCTACGAACTTCATACAC+CGG | + | chr7.3:20920614-20920633 | None:intergenic | 35.0% | |
| ! | AATGGTTGAGGTTGATCAAT+TGG | - | chr7.3:20920439-20920458 | MS.gene068083:CDS | 35.0% |
| ! | AGAGAGAGTACAAAGAGAAA+TGG | - | chr7.3:20920204-20920223 | MS.gene068083:CDS | 35.0% |
| ! | AGGTTGATCAGAAGAGAATT+GGG | - | chr7.3:20920050-20920069 | MS.gene068083:CDS | 35.0% |
| ! | ATGTTGGAGCTTGTGTTATT+AGG | - | chr7.3:20920635-20920654 | MS.gene068083:CDS | 35.0% |
| ! | TGTTGGAGCTTGTGTTATTA+GGG | - | chr7.3:20920636-20920655 | MS.gene068083:CDS | 35.0% |
| !! | ATCAATTGGCTCATTTTCGA+AGG | - | chr7.3:20920453-20920472 | MS.gene068083:CDS | 35.0% |
| !! | ATGCTCTAACTGTTTTTCTC+AGG | - | chr7.3:20920552-20920571 | MS.gene068083:CDS | 35.0% |
| !! | ATGGATTCTCTGAAATCACT+AGG | + | chr7.3:20920080-20920099 | None:intergenic | 35.0% |
| !! | TCAATTGGCTCATTTTCGAA+GGG | - | chr7.3:20920454-20920473 | MS.gene068083:CDS | 35.0% |
| !! | TGCTCTAACTGTTTTTCTCA+GGG | - | chr7.3:20920553-20920572 | MS.gene068083:CDS | 35.0% |
| !! | TTGGTTGATTTGGACATTGT+GGG | - | chr7.3:20920128-20920147 | MS.gene068083:CDS | 35.0% |
| AGCTTCTTGTGATGAATCCA+AGG | - | chr7.3:20920682-20920701 | MS.gene068083:CDS | 40.0% | |
| AGGGTTTAGGGAAAAGTTGA+AGG | - | chr7.3:20920292-20920311 | MS.gene068083:CDS | 40.0% | |
| CAATGCTGTAGTCTATGAAG+TGG | - | chr7.3:20920712-20920731 | MS.gene068083:CDS | 40.0% | |
| CTGTAGTCTATGAAGTGGAT+GGG | - | chr7.3:20920717-20920736 | MS.gene068083:CDS | 40.0% | |
| GAGGTAAAAGAGAAGGTGAT+TGG | - | chr7.3:20920741-20920760 | MS.gene068083:CDS | 40.0% | |
| GAGTTTGACTGTGGAGAAAA+TGG | - | chr7.3:20920421-20920440 | MS.gene068083:CDS | 40.0% | |
| GGGTTTAGGGAAAAGTTGAA+GGG | - | chr7.3:20920293-20920312 | MS.gene068083:CDS | 40.0% | |
| TGTAGTCTATGAAGTGGATG+GGG | - | chr7.3:20920718-20920737 | MS.gene068083:CDS | 40.0% | |
| TTAGGGAAAAGTTGAAGGGT+TGG | - | chr7.3:20920297-20920316 | MS.gene068083:CDS | 40.0% | |
| TTGCTTATGATGTCGGTGAA+TGG | - | chr7.3:20920005-20920024 | MS.gene068083:CDS | 40.0% | |
| ! | AAAAGTTGAAGGGTTGGCAA+AGG | - | chr7.3:20920303-20920322 | MS.gene068083:CDS | 40.0% |
| ! | GAGGTTGATCAGAAGAGAAT+TGG | - | chr7.3:20920049-20920068 | MS.gene068083:CDS | 40.0% |
| ! | TTCTCATTAGCCTCCAAGAA+CGG | + | chr7.3:20920773-20920792 | None:intergenic | 40.0% |
| !! | GGAGTTGATATTGTTGGAAG+AGG | - | chr7.3:20919935-20919954 | MS.gene068083:CDS | 40.0% |
| !! | GTTGGTTGATTTGGACATTG+TGG | - | chr7.3:20920127-20920146 | MS.gene068083:CDS | 40.0% |
| !! | TCTAACTGTTTTTCTCAGGG+AGG | - | chr7.3:20920556-20920575 | MS.gene068083:CDS | 40.0% |
| !! | TGGTTGATTTGGACATTGTG+GGG | - | chr7.3:20920129-20920148 | MS.gene068083:CDS | 40.0% |
| AAAATATCCCCGGATGCCTA+AGG | + | chr7.3:20920514-20920533 | None:intergenic | 45.0% | |
| CCCTCTCTCAATCTTAAACC+CGG | + | chr7.3:20920276-20920295 | None:intergenic | 45.0% | |
| CGAACTTCATACACCGGATT+AGG | + | chr7.3:20920608-20920627 | None:intergenic | 45.0% | |
| CGCTTCATTTGCATGCTTTG+AGG | - | chr7.3:20920030-20920049 | MS.gene068083:CDS | 45.0% | |
| CTCTCAATCTTAAACCCGGT+TGG | + | chr7.3:20920272-20920291 | None:intergenic | 45.0% | |
| GACTGTGGAGAAAATGGTTG+AGG | - | chr7.3:20920427-20920446 | MS.gene068083:CDS | 45.0% | |
| GCTGTAGTCTATGAAGTGGA+TGG | - | chr7.3:20920716-20920735 | MS.gene068083:CDS | 45.0% | |
| GGTTGTTGTGAGACAACATG+AGG | - | chr7.3:20919956-20919975 | MS.gene068083:CDS | 45.0% | |
| GTAGTCTATGAAGTGGATGG+GGG | - | chr7.3:20920719-20920738 | MS.gene068083:CDS | 45.0% | |
| GTTGGTTGGGACGATGAATT+GGG | - | chr7.3:20920155-20920174 | MS.gene068083:CDS | 45.0% | |
| TACAGCATTGCTCTCTTCCT+TGG | + | chr7.3:20920702-20920721 | None:intergenic | 45.0% | |
| TGAGCTGTTGAGTTTGACTG+TGG | - | chr7.3:20920412-20920431 | MS.gene068083:CDS | 45.0% | |
| TGATTGGGTGATTCCGTTCT+TGG | - | chr7.3:20920757-20920776 | MS.gene068083:CDS | 45.0% | |
| TGTGAGACAACATGAGGTTG+AGG | - | chr7.3:20919962-20919981 | MS.gene068083:CDS | 45.0% | |
| TTGGGACGATGAATTGGGAA+TGG | - | chr7.3:20920160-20920179 | MS.gene068083:CDS | 45.0% | |
| ! | ACCGGGTTTAAGATTGAGAG+AGG | - | chr7.3:20920272-20920291 | MS.gene068083:CDS | 45.0% |
| ! | AGGGTTGATTGAGCCTAATC+CGG | - | chr7.3:20920592-20920611 | MS.gene068083:CDS | 45.0% |
| ! | CCGGGTTTAAGATTGAGAGA+GGG | - | chr7.3:20920273-20920292 | MS.gene068083:CDS | 45.0% |
| ! | GGTTCAGAGGTATGAGAAGA+GGG | - | chr7.3:20920373-20920392 | MS.gene068083:CDS | 45.0% |
| ! | TGATTTGGACATTGTGGGGT+TGG | - | chr7.3:20920133-20920152 | MS.gene068083:CDS | 45.0% |
| AGGGAGGCTTATGAGAAAGG+AGG | - | chr7.3:20920572-20920591 | MS.gene068083:CDS | 50.0% | |
| AGTTACTCCTTAGGCATCCG+GGG | - | chr7.3:20920504-20920523 | MS.gene068083:CDS | 50.0% | |
| ATGTGCGCGAGTTACTCCTT+AGG | - | chr7.3:20920495-20920514 | MS.gene068083:CDS | 50.0% | |
| CGAGTTACTCCTTAGGCATC+CGG | - | chr7.3:20920502-20920521 | MS.gene068083:CDS | 50.0% | |
| CTCAGGGAGGCTTATGAGAA+AGG | - | chr7.3:20920569-20920588 | MS.gene068083:CDS | 50.0% | |
| GAGTTACTCCTTAGGCATCC+GGG | - | chr7.3:20920503-20920522 | MS.gene068083:CDS | 50.0% | |
| GATGGGGGAGGTAAAAGAGA+AGG | - | chr7.3:20920734-20920753 | MS.gene068083:CDS | 50.0% | |
| GGGAGGCTTATGAGAAAGGA+GGG | - | chr7.3:20920573-20920592 | MS.gene068083:CDS | 50.0% | |
| TTGGGTGATTCCGTTCTTGG+AGG | - | chr7.3:20920760-20920779 | MS.gene068083:CDS | 50.0% | |
| ! | ATTGGGAATGGCGCTTGTTG+AGG | - | chr7.3:20920172-20920191 | MS.gene068083:CDS | 50.0% |
| ! | GAATGGCGCTTGTTGAGGAA+TGG | - | chr7.3:20920177-20920196 | MS.gene068083:CDS | 50.0% |
| ! | GGGTTCAGAGGTATGAGAAG+AGG | - | chr7.3:20920372-20920391 | MS.gene068083:CDS | 50.0% |
| ! | GGTTGGTTGGGACGATGAAT+TGG | - | chr7.3:20920154-20920173 | MS.gene068083:CDS | 50.0% |
| ! | TTAAGTGTGGTGGGGTTCAG+AGG | - | chr7.3:20920360-20920379 | MS.gene068083:CDS | 50.0% |
| ! | TTGGACATTGTGGGGTTGGT+TGG | - | chr7.3:20920137-20920156 | MS.gene068083:CDS | 50.0% |
| !! | ACATTGTGGGGTTGGTTGGT+TGG | - | chr7.3:20920141-20920160 | MS.gene068083:CDS | 50.0% |
| !! | CATTGTGGGGTTGGTTGGTT+GGG | - | chr7.3:20920142-20920161 | MS.gene068083:CDS | 50.0% |
| GTCTATGAAGTGGATGGGGG+AGG | - | chr7.3:20920722-20920741 | MS.gene068083:CDS | 55.0% | |
| ! | GGCGCTTGTTGAGGAATGGA+GGG | - | chr7.3:20920181-20920200 | MS.gene068083:CDS | 55.0% |
| ! | TGGCGCTTGTTGAGGAATGG+AGG | - | chr7.3:20920180-20920199 | MS.gene068083:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 20919930 | 20920799 | 20919930 | ID=MS.gene068083 |
| chr7.3 | mRNA | 20919930 | 20920799 | 20919930 | ID=MS.gene068083.t1;Parent=MS.gene068083 |
| chr7.3 | exon | 20919930 | 20920799 | 20919930 | ID=MS.gene068083.t1.exon1;Parent=MS.gene068083.t1 |
| chr7.3 | CDS | 20919930 | 20920799 | 20919930 | ID=cds.MS.gene068083.t1;Parent=MS.gene068083.t1 |
| Gene Sequence |
| Protein sequence |
