AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06818

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06818.t1 MTR_3g092780 94.161 685 13 3 1 658 1 685 0.0 1327
MS.gene06818.t1 MTR_3g092780 94.015 685 13 4 1 658 1 684 0.0 1320
MS.gene06818.t1 MTR_3g092780 88.029 685 14 4 1 658 1 644 0.0 1173
MS.gene06818.t1 MTR_3g092780 87.883 685 14 5 1 658 1 643 0.0 1167
MS.gene06818.t1 MTR_7g118260 38.898 617 322 16 45 646 7 583 1.68e-106 335
MS.gene06818.t1 MTR_1g067110 31.457 693 360 19 40 646 73 736 6.03e-67 234
MS.gene06818.t1 MTR_8g024260 39.257 377 189 11 39 388 23 386 6.04e-67 231
MS.gene06818.t1 MTR_7g118260 71.756 131 37 0 45 175 7 137 1.13e-60 213
MS.gene06818.t1 MTR_7g118260 34.118 340 193 11 322 646 223 546 1.35e-30 127
MS.gene06818.t1 MTR_1g067110 29.569 673 359 19 40 626 73 716 1.32e-52 193
MS.gene06818.t1 MTR_4g061360 58.015 131 55 0 43 173 80 210 2.34e-48 182
MS.gene06818.t1 MTR_4g061360 76.000 50 12 0 597 646 714 763 9.64e-18 88.2
MS.gene06818.t1 MTR_7g118260 31.447 477 287 16 186 646 45 497 1.58e-34 138
MS.gene06818.t1 MTR_7g118260 34.118 340 193 11 322 646 90 413 8.43e-31 125
MS.gene06818.t1 MTR_3g037390 43.448 145 82 0 30 174 2 146 3.96e-30 125
MS.gene06818.t1 MTR_3g037390 68.889 45 14 0 604 648 498 542 1.51e-12 70.9
MS.gene06818.t1 MTR_4g108880 44.186 129 72 0 46 174 27 155 1.71e-29 124
MS.gene06818.t1 MTR_4g108880 73.333 45 12 0 604 648 505 549 5.79e-14 75.5
MS.gene06818.t1 MTR_1g098620 81.667 60 11 0 366 425 28 87 3.35e-26 103
MS.gene06818.t1 MTR_1g032570 42.276 123 66 2 52 173 15 133 6.32e-24 107
MS.gene06818.t1 MTR_2g034960 36.306 157 95 2 52 207 33 185 1.55e-23 105
MS.gene06818.t1 MTR_3g086100 41.129 124 68 2 52 174 17 136 1.80e-23 105
MS.gene06818.t1 MTR_4g131580 36.986 146 80 4 52 190 21 161 2.08e-23 105
MS.gene06818.t1 MTR_2g450070 37.903 124 72 2 52 174 22 141 2.12e-23 105
MS.gene06818.t1 MTR_2g450070 37.903 124 72 2 52 174 22 141 2.51e-23 105
MS.gene06818.t1 MTR_4g121020 35.669 157 96 2 52 207 35 187 3.45e-23 105
MS.gene06818.t1 MTR_4g121020 35.669 157 96 2 52 207 35 187 3.82e-23 104
MS.gene06818.t1 MTR_3g106220 37.097 124 73 2 52 174 12 131 4.04e-22 101
MS.gene06818.t1 MTR_8g079940 35.088 171 97 5 52 213 29 194 6.03e-22 100
MS.gene06818.t1 MTR_4g131570 37.008 127 75 2 52 177 21 143 1.37e-21 99.8
MS.gene06818.t1 MTR_4g131600 34.132 167 89 5 52 211 24 176 1.83e-21 99.4
MS.gene06818.t1 MTR_1g013170 36.220 127 76 2 52 177 9 131 4.38e-21 97.4
MS.gene06818.t1 MTR_3g102600 38.583 127 72 3 52 176 12 134 2.04e-20 89.7
MS.gene06818.t1 MTR_3g102600 33.333 174 95 5 52 223 12 166 7.16e-20 89.4
MS.gene06818.t1 MTR_1g013180 35.766 137 82 3 39 174 148 279 3.55e-19 92.4
MS.gene06818.t1 MTR_7g117705 33.594 128 79 3 52 177 9 132 1.62e-16 83.2
MS.gene06818.t1 MTR_7g490310 29.496 139 80 2 52 172 9 147 2.00e-15 76.6
MS.gene06818.t1 MTR_1g049100 30.597 134 82 1 52 174 8 141 2.33e-15 75.5
MS.gene06818.t1 MTR_3g102590 30.952 168 108 3 52 218 12 172 6.21e-15 74.3
MS.gene06818.t1 MTR_3g102590 31.515 165 105 3 52 215 12 169 6.88e-15 75.1
MS.gene06818.t1 MTR_3g102600 45.000 80 38 3 99 176 10 85 8.09e-15 72.4
MS.gene06818.t1 MTR_5g036480 27.368 190 111 4 52 228 16 191 1.05e-14 74.7
MS.gene06818.t1 MTR_3g102600 45.000 80 38 3 99 176 10 85 3.77e-14 71.6
MS.gene06818.t1 MTR_3g078613 29.851 134 85 2 52 176 23 156 1.30e-13 70.5
MS.gene06818.t1 MTR_1g067110 37.589 141 69 4 525 646 431 571 4.23e-13 72.8
MS.gene06818.t1 MTR_4g098870 31.469 143 89 4 40 181 8 142 4.78e-13 72.4
MS.gene06818.t1 MTR_4g098870 31.469 143 89 4 40 181 28 162 6.22e-13 72.4
MS.gene06818.t1 MTR_4g098870 31.973 147 87 5 40 185 8 142 7.26e-13 72.0
MS.gene06818.t1 MTR_4g098870 31.973 147 87 5 40 185 28 162 8.28e-13 72.0
MS.gene06818.t1 MTR_4g098870 31.469 143 89 4 40 181 47 181 9.00e-13 71.6
MS.gene06818.t1 MTR_3g037390 68.889 45 14 0 604 648 394 438 1.17e-12 70.9
MS.gene06818.t1 MTR_3g037390 69.048 42 13 0 133 174 1 42 1.42e-12 70.9
MS.gene06818.t1 MTR_1g032570 48.529 68 30 2 107 173 1 64 1.22e-12 71.2
MS.gene06818.t1 MTR_4g106590 29.771 131 82 2 52 172 26 156 2.32e-12 67.4
MS.gene06818.t1 MTR_3g078613 29.630 135 85 3 52 176 23 157 3.90e-12 66.2
MS.gene06818.t1 MTR_5g014040 30.070 143 91 4 40 181 8 142 4.30e-12 69.3
MS.gene06818.t1 MTR_5g014040 30.070 143 91 4 40 181 8 142 4.61e-12 69.3
MS.gene06818.t1 MTR_3g093860 31.746 126 71 3 54 166 20 143 1.41e-11 63.5
MS.gene06818.t1 MTR_3g105710 49.231 65 32 1 591 654 219 283 1.71e-11 65.9
MS.gene06818.t1 MTR_8g038620 28.261 138 82 2 52 172 9 146 2.43e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06818.t1 AT5G24470 41.702 470 183 14 24 463 17 425 3.29e-92 296
MS.gene06818.t1 AT5G24470 68.657 67 11 2 586 646 489 551 1.01e-18 90.5
MS.gene06818.t1 AT2G46790 74.627 134 34 0 40 173 25 158 1.08e-68 231
MS.gene06818.t1 AT2G46790 74.627 134 34 0 40 173 25 158 2.17e-68 231
MS.gene06818.t1 AT2G46790 81.250 48 9 0 604 651 417 464 1.30e-17 86.7
MS.gene06818.t1 AT5G60100 34.483 377 218 8 40 408 52 407 4.55e-52 185
MS.gene06818.t1 AT5G60100 34.483 377 218 8 40 408 52 407 4.55e-52 185
MS.gene06818.t1 AT5G60100 34.483 377 218 8 40 408 52 407 4.55e-52 185
MS.gene06818.t1 AT5G60100 60.448 134 53 0 40 173 52 185 1.33e-51 186
MS.gene06818.t1 AT5G60100 69.841 63 18 1 595 657 433 494 3.59e-17 85.5
MS.gene06818.t1 AT5G60100 60.448 134 53 0 40 173 52 185 1.33e-51 186
MS.gene06818.t1 AT5G60100 69.841 63 18 1 595 657 433 494 3.59e-17 85.5
MS.gene06818.t1 AT5G60100 60.448 134 53 0 40 173 52 185 1.33e-51 186
MS.gene06818.t1 AT5G60100 69.841 63 18 1 595 657 433 494 3.59e-17 85.5
MS.gene06818.t1 AT5G60100 60.448 134 53 0 40 173 52 185 1.50e-50 184
MS.gene06818.t1 AT5G60100 69.841 63 18 1 595 657 460 521 5.02e-17 85.1
MS.gene06818.t1 AT5G02810 48.588 177 78 2 10 173 23 199 1.21e-46 176
MS.gene06818.t1 AT5G02810 83.721 43 7 0 604 646 669 711 8.65e-16 81.6
MS.gene06818.t1 AT5G61380 43.571 140 76 1 35 174 5 141 1.63e-29 124
MS.gene06818.t1 AT5G61380 68.889 45 14 0 604 648 533 577 1.29e-12 71.2
MS.gene06818.t1 AT2G25180 35.204 196 118 3 52 246 17 204 2.56e-25 111
MS.gene06818.t1 AT4G31920 40.164 122 68 2 52 172 17 134 1.30e-22 102
MS.gene06818.t1 AT3G16857 35.172 145 89 2 52 195 37 177 1.37e-21 100
MS.gene06818.t1 AT3G16857 35.172 145 89 2 52 195 37 177 1.42e-21 100
MS.gene06818.t1 AT1G67710 38.889 126 72 2 52 176 11 132 1.21e-20 96.3
MS.gene06818.t1 AT2G01760 40.800 125 68 2 52 174 11 131 1.23e-20 95.1
MS.gene06818.t1 AT2G46670 81.250 48 9 0 604 651 132 179 5.25e-19 85.9
MS.gene06818.t1 AT5G58080 34.437 151 90 3 42 192 10 151 5.90e-19 91.7
MS.gene06818.t1 AT2G46790 81.250 48 9 0 604 651 260 307 3.59e-18 86.3
MS.gene06818.t1 AT2G46790 81.250 48 9 0 604 651 260 307 3.59e-18 86.3
MS.gene06818.t1 AT2G46790 81.250 48 9 0 604 651 300 347 7.46e-18 86.3
MS.gene06818.t1 AT2G46790 80.488 41 8 0 133 173 1 41 4.31e-17 84.0
MS.gene06818.t1 AT2G01760 37.143 140 72 5 46 174 25 159 1.05e-16 83.2
MS.gene06818.t1 AT5G02810 83.721 43 7 0 604 646 525 567 5.69e-16 82.0
MS.gene06818.t1 AT5G02810 54.237 59 23 1 115 173 1 55 1.90e-13 73.9
MS.gene06818.t1 AT3G16857 35.455 110 66 2 87 195 2 107 1.77e-15 80.5
MS.gene06818.t1 AT1G19050 30.597 134 84 2 52 176 24 157 5.88e-15 74.7
MS.gene06818.t1 AT1G10470 32.031 128 78 1 54 172 36 163 2.44e-14 73.9
MS.gene06818.t1 AT1G10470 32.031 128 78 1 54 172 22 149 2.57e-14 73.6
MS.gene06818.t1 AT1G59940 32.812 128 77 1 54 172 35 162 3.16e-14 73.2
MS.gene06818.t1 AT3G62670 30.114 176 110 5 44 215 34 200 3.45e-14 75.5
MS.gene06818.t1 AT1G59940 32.812 128 77 1 54 172 127 254 9.48e-14 73.2
MS.gene06818.t1 AT3G48100 33.333 129 75 3 48 166 22 149 2.32e-13 69.3
MS.gene06818.t1 AT3G57040 28.571 140 81 1 52 172 9 148 2.53e-13 70.5
MS.gene06818.t1 AT3G57040 28.571 140 81 1 52 172 9 148 2.53e-13 70.5
MS.gene06818.t1 AT1G74890 30.000 130 82 1 52 172 18 147 4.25e-13 69.3
MS.gene06818.t1 AT5G62920 29.286 140 90 1 36 166 9 148 6.35e-13 68.2
MS.gene06818.t1 AT2G41310 30.882 136 77 2 54 172 11 146 8.29e-13 68.9
MS.gene06818.t1 AT5G49240 34.091 132 80 3 52 180 42 169 6.04e-12 67.4
MS.gene06818.t1 AT3G56380 28.358 134 86 2 52 175 20 153 1.43e-11 63.5
MS.gene06818.t1 AT4G00760 31.250 160 102 5 70 227 1 154 1.47e-11 66.6
MS.gene06818.t1 AT1G49190 28.689 122 82 2 54 174 36 153 2.71e-11 67.0
MS.gene06818.t1 AT1G49190 28.689 122 82 2 54 174 36 153 3.86e-11 65.9

Find 121 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAATCCCGATTCTCTTTC+TGG 0.070056 3.1:+74787832 MS.gene06818:CDS
CGCACTTCTCACATTAATTA+TGG 0.184807 3.1:+74785627 MS.gene06818:CDS
TCTCTTCCGATTCCTGTAAA+AGG 0.269959 3.1:+74787114 MS.gene06818:CDS
GAGCAGCGTCCTCGAGTTAA+AGG 0.270096 3.1:+74787793 MS.gene06818:CDS
CAAGAACTTGACATTCATTT+AGG 0.270340 3.1:+74786227 MS.gene06818:CDS
TCCAGTAGTATTTGTAATAA+TGG 0.285223 3.1:+74787426 MS.gene06818:CDS
GGAATTTGTGGCAGCATGTT+TGG 0.301229 3.1:+74785875 MS.gene06818:CDS
TATGAACCTCGCGGTCTAAA+TGG 0.303085 3.1:+74787306 MS.gene06818:CDS
GCCGCAACCGCTGGCATAAA+TGG 0.311050 3.1:+74786029 MS.gene06818:CDS
GCCATTTATGCCAGCGGTTG+CGG 0.331299 3.1:-74786030 None:intergenic
TGCTGTTGCTGATGGCTTGA+AGG 0.353593 3.1:+74785525 MS.gene06818:CDS
TGCTTGCATTCAAAGAAATA+AGG 0.359592 3.1:+74786136 MS.gene06818:CDS
AAGGAAGCTATTGACTTGAT+TGG 0.361168 3.1:+74786541 MS.gene06818:CDS
ACCAATGCTGGTAAAATTGC+TGG 0.363758 3.1:-74787454 None:intergenic
GTTCCTGTGTATACACAATT+TGG 0.365801 3.1:-74787344 None:intergenic
GTATTGAACTATCTGAGTTA+TGG 0.368410 3.1:-74787038 None:intergenic
GTGTATCACTTTCATCTTGA+GGG 0.373515 3.1:-74786052 None:intergenic
CTTAGAAAATGCAACTATAA+AGG 0.375160 3.1:+74784699 MS.gene06818:CDS
TTCGAGGAACACAACTGAAC+CGG 0.382827 3.1:-74787220 None:intergenic
GAGATCCTTCTCAAAGTTGC+TGG 0.389986 3.1:-74786671 None:intergenic
TGTGTATACACAATTTGGTT+TGG 0.392077 3.1:-74787339 None:intergenic
ACAACTGAACCGGGCATTGA+TGG 0.393075 3.1:-74787210 None:intergenic
GATACACTTTGATCAGTTGT+AGG 0.394686 3.1:-74787405 None:intergenic
TCCATTATTACAAATACTAC+TGG 0.397236 3.1:-74787427 None:intergenic
CAGAACAGCAGCAGTTTCAG+AGG 0.404213 3.1:+74787527 MS.gene06818:CDS
GAGAAGGTGAGGGAAGAAGA+AGG 0.408178 3.1:+74784543 MS.gene06818:CDS
CTTAGTTCATTTATTCGAAT+CGG 0.408502 3.1:-74785853 None:intergenic
CATAAGGGTGTGCCTTTCTT+CGG 0.412245 3.1:-74786695 None:intergenic
TCAAATTTACTCTACTACTA+AGG 0.413508 3.1:+74786522 MS.gene06818:CDS
GAGAAGTGCGTAGCCGGATA+TGG 0.417405 3.1:-74785614 None:intergenic
TGTCCTGCGCGATCACTGCC+TGG 0.417920 3.1:-74786250 None:intergenic
CTGAAGCATTGGAATGCATA+AGG 0.429243 3.1:-74786711 None:intergenic
AATGATCTTTGTATGGCCTA+TGG 0.430478 3.1:+74787147 MS.gene06818:CDS
GTCGATTTGCCAGCCATATC+CGG 0.434584 3.1:+74785601 MS.gene06818:CDS
CGATTCCTGTAAAAGGTGTA+AGG 0.438701 3.1:+74787121 MS.gene06818:CDS
CCAGAAAGAGAATCGGGATT+CGG 0.439697 3.1:-74787832 None:intergenic
TTCAATATCATACTTATGAC+AGG 0.442500 3.1:-74785673 None:intergenic
TCTTGTGTCTTTATTTCACT+TGG 0.446311 3.1:-74786209 None:intergenic
GCAGTTGCTGCTGTTGCTGA+TGG 0.454486 3.1:+74785517 MS.gene06818:intron
AGAGAGATGTTATGAAAAGA+AGG 0.455803 3.1:+74787638 MS.gene06818:CDS
CCAGGGTTTCGTACACAATC+AGG 0.457218 3.1:+74787183 MS.gene06818:CDS
AATAAGGACTTAATTGAGAA+AGG 0.462433 3.1:+74786152 MS.gene06818:CDS
AAGGTTAAATGATCTTTGTA+TGG 0.462879 3.1:+74787140 MS.gene06818:CDS
CAGCAGTCAGCCGCAACCGC+TGG 0.465375 3.1:+74786020 MS.gene06818:intron
GTGAAATGAAAGGGCTTATG+AGG 0.465706 3.1:+74784592 MS.gene06818:CDS
GTTTGACCATTCTCCACAGT+TGG 0.467281 3.1:+74786624 MS.gene06818:CDS
TTGCTGATGGCTTGAAGGCA+TGG 0.467739 3.1:+74785530 MS.gene06818:CDS
ATTCATGCAGGTATACAAAC+AGG 0.476773 3.1:+74786941 MS.gene06818:intron
TAAATGAACTAAGGAATTTG+TGG 0.487302 3.1:+74785863 MS.gene06818:CDS
ATACACTTTGATCAGTTGTA+GGG 0.491753 3.1:-74787404 None:intergenic
GAGAAGTTAATTACTACTGC+AGG 0.495962 3.1:-74786979 None:intergenic
AGTGGAAGAAGAAGAAGAGA+AGG 0.496753 3.1:+74784527 MS.gene06818:CDS
TGCTGATGGCTTGAAGGCAT+GGG 0.496945 3.1:+74785531 MS.gene06818:CDS
AATTCATCAATTGATTGCAC+AGG 0.498212 3.1:+74786598 MS.gene06818:CDS
CCGTTTGAAAGCTGAAGCAT+TGG 0.498244 3.1:-74786722 None:intergenic
TAATGTGAGAAGTGCGTAGC+CGG 0.502440 3.1:-74785620 None:intergenic
AGAAGGTGAGGGAAGAAGAA+GGG 0.503650 3.1:+74784544 MS.gene06818:CDS
GTGAGGGAAGAAGAAGGGAG+TGG 0.503857 3.1:+74784549 MS.gene06818:CDS
AACGCTGCTAGTAATCGTTC+TGG 0.506779 3.1:+74786104 MS.gene06818:CDS
TGGTGAGAAAATAGTGAGAG+TGG 0.512691 3.1:+74784509 MS.gene06818:CDS
CCAATGCTTCAGCTTTCAAA+CGG 0.514454 3.1:+74786722 MS.gene06818:CDS
GGAACACAAGTCAGAACATC+CGG 0.514906 3.1:+74787362 MS.gene06818:CDS
ATTACTTCCATAACCAATGC+TGG 0.523079 3.1:-74787466 None:intergenic
AGAGGTGGTGGTGAAATGAA+AGG 0.526245 3.1:+74784582 MS.gene06818:CDS
AATGAAAGGGCTTATGAGGT+GGG 0.528311 3.1:+74784596 MS.gene06818:CDS
TGAAGCATTGGAATGCATAA+GGG 0.528347 3.1:-74786710 None:intergenic
TGTGTATCACTTTCATCTTG+AGG 0.529215 3.1:-74786053 None:intergenic
GAGATAAGTCTTTGATCCTC+CGG 0.529482 3.1:-74787381 None:intergenic
GAGGTGGTGGTGAAATGAAA+GGG 0.532084 3.1:+74784583 MS.gene06818:CDS
AGTGCGTAGCCGGATATGGC+TGG 0.534736 3.1:-74785610 None:intergenic
AAAGATCCAACTGTGGAGAA+TGG 0.536900 3.1:-74786630 None:intergenic
TGGTGGAAGTGTTGAACCAT+AGG 0.536921 3.1:-74787163 None:intergenic
AGTGGAACTGAGAGTAGAGG+TGG 0.546233 3.1:+74784567 MS.gene06818:CDS
ATTCACATCGAGCTATGCTA+CGG 0.546537 3.1:+74787580 MS.gene06818:CDS
AGAAGGATCTCACCGAAGAA+AGG 0.548442 3.1:+74786683 MS.gene06818:CDS
AGATCCTTCTCAAAGTTGCT+GGG 0.549454 3.1:-74786670 None:intergenic
GGGAGTGGAACTGAGAGTAG+AGG 0.550599 3.1:+74784564 MS.gene06818:CDS
AAGAAGAAGAAGAGAAGGTG+AGG 0.553208 3.1:+74784532 MS.gene06818:CDS
TTTAGGAATGCTAGCATCAG+TGG 0.555975 3.1:+74786475 MS.gene06818:CDS
AGAAGAAGAAGAGAAGGTGA+GGG 0.557623 3.1:+74784533 MS.gene06818:CDS
CGATTCGAATAAATGAACTA+AGG 0.559225 3.1:+74785854 MS.gene06818:CDS
GGAACTGAGAGTAGAGGTGG+TGG 0.559447 3.1:+74784570 MS.gene06818:CDS
AAATGAAAGGGCTTATGAGG+TGG 0.560859 3.1:+74784595 MS.gene06818:CDS
TCGAGGAACACAACTGAACC+GGG 0.562948 3.1:-74787219 None:intergenic
ACTTGACATTCATTTAGGCC+AGG 0.566880 3.1:+74786232 MS.gene06818:CDS
AGAACAGCAGCAGTTTCAGA+GGG 0.568196 3.1:+74787528 MS.gene06818:CDS
CAACTTCACATTCTCAGCAA+GGG 0.576831 3.1:+74787088 MS.gene06818:CDS
AGCGCAAATAATTGCAAGGA+CGG 0.576948 3.1:+74786436 MS.gene06818:CDS
GCAACTTCACATTCTCAGCA+AGG 0.583947 3.1:+74787087 MS.gene06818:CDS
TCAGGTCCACCATCAATGCC+CGG 0.589208 3.1:+74787201 MS.gene06818:CDS
TCATCCCAGCAACTTTGAGA+AGG 0.593867 3.1:+74786666 MS.gene06818:CDS
ACTGAACCGGGCATTGATGG+TGG 0.596008 3.1:-74787207 None:intergenic
ATTGGTTATGGAAGTAATTG+CGG 0.597392 3.1:+74787471 MS.gene06818:CDS
TTCACATCGAGCTATGCTAC+GGG 0.598642 3.1:+74787581 MS.gene06818:CDS
AAAGAGAATCGGGATTCGGT+TGG 0.599964 3.1:-74787828 None:intergenic
TATGGTTCAACACTTCCACC+AGG 0.607254 3.1:+74787165 MS.gene06818:CDS
GACAAGCGCAAATAATTGCA+AGG 0.612224 3.1:+74786432 MS.gene06818:CDS
GGAAGTAATTGCGGAAGTAG+CGG 0.613525 3.1:+74787480 MS.gene06818:CDS
ACAAATTGTCCTTTAACTCG+AGG 0.617609 3.1:-74787802 None:intergenic
TTGAGGGCCATTTATGCCAG+CGG 0.618633 3.1:-74786036 None:intergenic
ATCGCGCAGGACAGTCACGC+CGG 0.618782 3.1:+74786260 MS.gene06818:CDS
AATAAACAACAACATGGGTG+AGG 0.620435 3.1:+74784476 None:intergenic
CCTGATTGTGTACGAAACCC+TGG 0.626598 3.1:-74787183 None:intergenic
AAGGCATGGGAAATACTCAA+AGG 0.628269 3.1:+74785544 MS.gene06818:CDS
TACACTTTGATCAGTTGTAG+GGG 0.630188 3.1:-74787403 None:intergenic
AATGAAGAACTCACAAACAG+TGG 0.636681 3.1:+74787555 MS.gene06818:CDS
AAACCAAATTGTGTATACAC+AGG 0.639133 3.1:+74787341 MS.gene06818:CDS
GAATGCTAGCATCAGTGGTG+AGG 0.644176 3.1:+74786480 MS.gene06818:CDS
AGGCCAGGCAGTGATCGCGC+AGG 0.648174 3.1:+74786247 MS.gene06818:CDS
GTATACAAATGCATGTTGAG+AGG 0.663604 3.1:+74785808 MS.gene06818:CDS
GCTGCTAGTAATCGTTCTGG+CGG 0.666285 3.1:+74786107 MS.gene06818:CDS
CTGTTTCCATTTAGACCGCG+AGG 0.673170 3.1:-74787312 None:intergenic
ATGGTTCAACACTTCCACCA+GGG 0.675718 3.1:+74787166 MS.gene06818:CDS
GCGCAGGACAGTCACGCCGG+AGG 0.678639 3.1:+74786263 MS.gene06818:CDS
TCAATATCATACTTATGACA+GGG 0.693313 3.1:-74785672 None:intergenic
ATGGGTGAGGTTGTAATGAG+TGG 0.695889 3.1:+74784489 MS.gene06818:CDS
GAGCAGCTTTATGAACCTCG+CGG 0.700721 3.1:+74787297 MS.gene06818:CDS
CTGAGAGAAAGATCCAACTG+TGG 0.713368 3.1:-74786637 None:intergenic
ACACAAGTCAGAACATCCGG+AGG 0.742561 3.1:+74787365 MS.gene06818:CDS
GATTGTGTACGAAACCCTGG+TGG 0.767923 3.1:-74787180 None:intergenic
AGTATCAGATCAATACTGCG+CGG 0.783873 3.1:-74785571 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATTTATTAACAAAATT+GGG + chr3.1:74785966-74785985 MS.gene06818:intron 10.0%
!! TAAGAATTTATTAACAAAAT+TGG + chr3.1:74785965-74785984 MS.gene06818:intron 10.0%
!! TAATAATTACAAAAATTAAG+GGG + chr3.1:74785129-74785148 MS.gene06818:intron 10.0%
!! ACGAAAAAATTAGAATAAAA+AGG - chr3.1:74786761-74786780 None:intergenic 15.0%
!! CGAAAAAATTAGAATAAAAA+GGG - chr3.1:74786760-74786779 None:intergenic 15.0%
!!! ACTTATTTATACTTTTTAAC+AGG + chr3.1:74787741-74787760 MS.gene06818:intron 15.0%
!!! ATTATTGAGTTTTATTATCT+TGG + chr3.1:74785408-74785427 MS.gene06818:intron 15.0%
!!! TTGAACAAACTTTTATTTTT+AGG + chr3.1:74786349-74786368 MS.gene06818:intron 15.0%
!! ATTAGAAATTTAGAAGTCTT+TGG + chr3.1:74785041-74785060 MS.gene06818:intron 20.0%
!! GTAAATATTAGGTTATATTG+AGG + chr3.1:74784947-74784966 MS.gene06818:intron 20.0%
! AAGAACTTCAAAACATGATA+CGG + chr3.1:74786824-74786843 MS.gene06818:intron 25.0%
! AAGGTTAAATGATCTTTGTA+TGG + chr3.1:74787140-74787159 MS.gene06818:CDS 25.0%
! AATAAGGACTTAATTGAGAA+AGG + chr3.1:74786152-74786171 MS.gene06818:CDS 25.0%
! AATATTGCTGTGTGTTTAAT+TGG + chr3.1:74784774-74784793 MS.gene06818:intron 25.0%
! AATTACAAAAATTAAGGGGA+TGG + chr3.1:74785133-74785152 MS.gene06818:intron 25.0%
! AGCACAAATAACTGTAAAAA+TGG + chr3.1:74786406-74786425 MS.gene06818:CDS 25.0%
! ATAGCAGTATGAAAATTACT+AGG + chr3.1:74785330-74785349 MS.gene06818:intron 25.0%
! CTTAGAAAATGCAACTATAA+AGG + chr3.1:74784699-74784718 MS.gene06818:CDS 25.0%
! CTTAGTTCATTTATTCGAAT+CGG - chr3.1:74785856-74785875 None:intergenic 25.0%
! GAATAATTGTACCAAGTTTA+TGG - chr3.1:74785361-74785380 None:intergenic 25.0%
! TAAATGAACTAAGGAATTTG+TGG + chr3.1:74785863-74785882 MS.gene06818:CDS 25.0%
! TAGAACTTAGATTTACTTTC+AGG - chr3.1:74785467-74785486 None:intergenic 25.0%
! TCAAATTTACTCTACTACTA+AGG + chr3.1:74786522-74786541 MS.gene06818:CDS 25.0%
! TCAATATCATACTTATGACA+GGG - chr3.1:74785675-74785694 None:intergenic 25.0%
! TCCAGTAGTATTTGTAATAA+TGG + chr3.1:74787426-74787445 MS.gene06818:CDS 25.0%
! TCCATTATTACAAATACTAC+TGG - chr3.1:74787430-74787449 None:intergenic 25.0%
! TTCAATATCATACTTATGAC+AGG - chr3.1:74785676-74785695 None:intergenic 25.0%
!!! TTTATTTTTAGGATTAAGCG+TGG + chr3.1:74786360-74786379 MS.gene06818:intron 25.0%
!!! TTTTTTAAAGAGAAGTGACA+TGG + chr3.1:74785255-74785274 MS.gene06818:intron 25.0%
AAACCAAATTGTGTATACAC+AGG + chr3.1:74787341-74787360 MS.gene06818:CDS 30.0%
AATTCATCAATTGATTGCAC+AGG + chr3.1:74786598-74786617 MS.gene06818:CDS 30.0%
AGAGAGATGTTATGAAAAGA+AGG + chr3.1:74787638-74787657 MS.gene06818:CDS 30.0%
ATACACTTTGATCAGTTGTA+GGG - chr3.1:74787407-74787426 None:intergenic 30.0%
ATTGGTTATGGAAGTAATTG+CGG + chr3.1:74787471-74787490 MS.gene06818:CDS 30.0%
CAAGAACTTGACATTCATTT+AGG + chr3.1:74786227-74786246 MS.gene06818:CDS 30.0%
CGATTCGAATAAATGAACTA+AGG + chr3.1:74785854-74785873 MS.gene06818:CDS 30.0%
GAAAGAAAGAAATTTACCTC+CGG - chr3.1:74786282-74786301 None:intergenic 30.0%
GTATTGAACTATCTGAGTTA+TGG - chr3.1:74787041-74787060 None:intergenic 30.0%
TGCTATAAGACTCTATTTCA+AGG - chr3.1:74785316-74785335 None:intergenic 30.0%
TGCTTGCATTCAAAGAAATA+AGG + chr3.1:74786136-74786155 MS.gene06818:CDS 30.0%
TGTGTATACACAATTTGGTT+TGG - chr3.1:74787342-74787361 None:intergenic 30.0%
! ATCTCTCTTTTCGTTTCAAA+CGG - chr3.1:74787626-74787645 None:intergenic 30.0%
! GTGTATGATTTTTATGCTTG+TGG + chr3.1:74786860-74786879 MS.gene06818:intron 30.0%
! TCAGATTCTTTTTGCATACT+TGG - chr3.1:74787063-74787082 None:intergenic 30.0%
! TCTTGTGTCTTTATTTCACT+TGG - chr3.1:74786212-74786231 None:intergenic 30.0%
! TTTAACCTTACACCTTTTAC+AGG - chr3.1:74787129-74787148 None:intergenic 30.0%
! TTTTGTTAGCTGAGAATCTT+AGG + chr3.1:74785279-74785298 MS.gene06818:intron 30.0%
! TTTTTCTCCAGAAAGAGAAT+CGG - chr3.1:74787842-74787861 None:intergenic 30.0%
!!! AATTTTACCAGCATTGGTTA+TGG + chr3.1:74787459-74787478 MS.gene06818:CDS 30.0%
!!! GAATTTTTGAGACTGCAATT+CGG - chr3.1:74786583-74786602 None:intergenic 30.0%
AATGAAGAACTCACAAACAG+TGG + chr3.1:74787555-74787574 MS.gene06818:CDS 35.0%
AATGATCTTTGTATGGCCTA+TGG + chr3.1:74787147-74787166 MS.gene06818:CDS 35.0%
ACAAATTGTCCTTTAACTCG+AGG - chr3.1:74787805-74787824 None:intergenic 35.0%
ACTAGGTTAAGCCATAAACT+TGG + chr3.1:74785347-74785366 MS.gene06818:intron 35.0%
ATTACTTCCATAACCAATGC+TGG - chr3.1:74787469-74787488 None:intergenic 35.0%
ATTCATGCAGGTATACAAAC+AGG + chr3.1:74786941-74786960 MS.gene06818:intron 35.0%
CGCACTTCTCACATTAATTA+TGG + chr3.1:74785627-74785646 MS.gene06818:CDS 35.0%
GAGAAGTTAATTACTACTGC+AGG - chr3.1:74786982-74787001 None:intergenic 35.0%
GATACACTTTGATCAGTTGT+AGG - chr3.1:74787408-74787427 None:intergenic 35.0%
GGAGAAATTCTTGCCAAAAA+TGG + chr3.1:74784617-74784636 MS.gene06818:CDS 35.0%
GTATACAAATGCATGTTGAG+AGG + chr3.1:74785808-74785827 MS.gene06818:CDS 35.0%
GTGTATCACTTTCATCTTGA+GGG - chr3.1:74786055-74786074 None:intergenic 35.0%
GTTCCTGTGTATACACAATT+TGG - chr3.1:74787347-74787366 None:intergenic 35.0%
TACACTTTGATCAGTTGTAG+GGG - chr3.1:74787406-74787425 None:intergenic 35.0%
TGTGTATCACTTTCATCTTG+AGG - chr3.1:74786056-74786075 None:intergenic 35.0%
TGTTTGTATACCTGCATGAA+TGG - chr3.1:74786942-74786961 None:intergenic 35.0%
! AGTCTTTGGACTGCAAATTT+TGG + chr3.1:74785055-74785074 MS.gene06818:intron 35.0%
! CTTACACCTTTTACAGGAAT+CGG - chr3.1:74787123-74787142 None:intergenic 35.0%
! TTTTCTCCAGAAAGAGAATC+GGG - chr3.1:74787841-74787860 None:intergenic 35.0%
!! AAGGAAGCTATTGACTTGAT+TGG + chr3.1:74786541-74786560 MS.gene06818:CDS 35.0%
!! GCAAATTTTGGAAAGGATCA+AGG + chr3.1:74785067-74785086 MS.gene06818:intron 35.0%
!! TCTTGCCAAAAATGGTTTTG+AGG + chr3.1:74784625-74784644 MS.gene06818:CDS 35.0%
!! TGAAGCATTGGAATGCATAA+GGG - chr3.1:74786713-74786732 None:intergenic 35.0%
!! TTGGACTGCAAATTTTGGAA+AGG + chr3.1:74785060-74785079 MS.gene06818:intron 35.0%
!!! CTTGCCAAAAATGGTTTTGA+GGG + chr3.1:74784626-74784645 MS.gene06818:CDS 35.0%
!!! GCAATGATCAAGAGCATTTT+AGG + chr3.1:74786458-74786477 MS.gene06818:CDS 35.0%
AAAGATCCAACTGTGGAGAA+TGG - chr3.1:74786633-74786652 None:intergenic 40.0%
AAATGAAAGGGCTTATGAGG+TGG + chr3.1:74784595-74784614 MS.gene06818:CDS 40.0%
AAATGGTGTTCCATTCATGC+AGG + chr3.1:74786929-74786948 MS.gene06818:intron 40.0%
AAGAAGAAGAAGAGAAGGTG+AGG + chr3.1:74784532-74784551 MS.gene06818:CDS 40.0%
AAGGCATGGGAAATACTCAA+AGG + chr3.1:74785544-74785563 MS.gene06818:CDS 40.0%
AATGAAAGGGCTTATGAGGT+GGG + chr3.1:74784596-74784615 MS.gene06818:CDS 40.0%
ACCAATGCTGGTAAAATTGC+TGG - chr3.1:74787457-74787476 None:intergenic 40.0%
ACTTGACATTCATTTAGGCC+AGG + chr3.1:74786232-74786251 MS.gene06818:CDS 40.0%
AGAAGAAGAAGAGAAGGTGA+GGG + chr3.1:74784533-74784552 MS.gene06818:CDS 40.0%
AGATCCTTCTCAAAGTTGCT+GGG - chr3.1:74786673-74786692 None:intergenic 40.0%
AGCGCAAATAATTGCAAGGA+CGG + chr3.1:74786436-74786455 MS.gene06818:CDS 40.0%
AGTATCAGATCAATACTGCG+CGG - chr3.1:74785574-74785593 None:intergenic 40.0%
AGTGGAAGAAGAAGAAGAGA+AGG + chr3.1:74784527-74784546 MS.gene06818:CDS 40.0%
ATTCACATCGAGCTATGCTA+CGG + chr3.1:74787580-74787599 MS.gene06818:CDS 40.0%
CAACTTCACATTCTCAGCAA+GGG + chr3.1:74787088-74787107 MS.gene06818:CDS 40.0%
CCAATGCTTCAGCTTTCAAA+CGG + chr3.1:74786722-74786741 MS.gene06818:CDS 40.0%
CTGCATGCTTATCACTGAAA+TGG + chr3.1:74786912-74786931 MS.gene06818:intron 40.0%
GACAAGCGCAAATAATTGCA+AGG + chr3.1:74786432-74786451 MS.gene06818:CDS 40.0%
GAGATAAGTCTTTGATCCTC+CGG - chr3.1:74787384-74787403 None:intergenic 40.0%
GCATGCAGAATTCAACAAAG+CGG - chr3.1:74786900-74786919 None:intergenic 40.0%
GTGAAATGAAAGGGCTTATG+AGG + chr3.1:74784592-74784611 MS.gene06818:CDS 40.0%
GTTTGGAGAAGACAATCAGT+AGG + chr3.1:74785892-74785911 MS.gene06818:intron 40.0%
TCTCTTCCGATTCCTGTAAA+AGG + chr3.1:74787114-74787133 MS.gene06818:CDS 40.0%
TGGTGAGAAAATAGTGAGAG+TGG + chr3.1:74784509-74784528 MS.gene06818:CDS 40.0%
TTTAGGAATGCTAGCATCAG+TGG + chr3.1:74786475-74786494 MS.gene06818:CDS 40.0%
! AGCACCCTCAAAACCATTTT+TGG - chr3.1:74784633-74784652 None:intergenic 40.0%
! CGATTCCTGTAAAAGGTGTA+AGG + chr3.1:74787121-74787140 MS.gene06818:CDS 40.0%
!! ATCATTTTGTTCGACTCGCA+AGG + chr3.1:74786310-74786329 MS.gene06818:intron 40.0%
!! CTGAAGCATTGGAATGCATA+AGG - chr3.1:74786714-74786733 None:intergenic 40.0%
!!! AATGGTTTTGAGGGTGCTTT+TGG + chr3.1:74784635-74784654 MS.gene06818:CDS 40.0%
!!! CTGCTTGAAAGTTTTGTTCG+AGG - chr3.1:74787239-74787258 None:intergenic 40.0%
AACGCTGCTAGTAATCGTTC+TGG + chr3.1:74786104-74786123 MS.gene06818:CDS 45.0%
AGAACAGCAGCAGTTTCAGA+GGG + chr3.1:74787528-74787547 MS.gene06818:CDS 45.0%
AGAAGGATCTCACCGAAGAA+AGG + chr3.1:74786683-74786702 MS.gene06818:CDS 45.0%
AGAAGGTGAGGGAAGAAGAA+GGG + chr3.1:74784544-74784563 MS.gene06818:CDS 45.0%
AGCGTGGCTAACTGCAAAAA+TGG + chr3.1:74786376-74786395 MS.gene06818:CDS 45.0%
ATGGGTGAGGTTGTAATGAG+TGG + chr3.1:74784489-74784508 MS.gene06818:CDS 45.0%
ATGGTTCAACACTTCCACCA+GGG + chr3.1:74787166-74787185 MS.gene06818:CDS 45.0%
CCAGAAAGAGAATCGGGATT+CGG - chr3.1:74787835-74787854 None:intergenic 45.0%
CCGTTTGAAAGCTGAAGCAT+TGG - chr3.1:74786725-74786744 None:intergenic 45.0%
CTGAGAGAAAGATCCAACTG+TGG - chr3.1:74786640-74786659 None:intergenic 45.0%
GAGATCCTTCTCAAAGTTGC+TGG - chr3.1:74786674-74786693 None:intergenic 45.0%
GCAACTTCACATTCTCAGCA+AGG + chr3.1:74787087-74787106 MS.gene06818:CDS 45.0%
GGAACACAAGTCAGAACATC+CGG + chr3.1:74787362-74787381 MS.gene06818:CDS 45.0%
GGAAGTAATTGCGGAAGTAG+CGG + chr3.1:74787480-74787499 MS.gene06818:CDS 45.0%
GGAATTTGTGGCAGCATGTT+TGG + chr3.1:74785875-74785894 MS.gene06818:CDS 45.0%
GGCTAACTGCAAAAATGGAG+TGG + chr3.1:74786381-74786400 MS.gene06818:CDS 45.0%
GTTTGACCATTCTCCACAGT+TGG + chr3.1:74786624-74786643 MS.gene06818:CDS 45.0%
TATGAACCTCGCGGTCTAAA+TGG + chr3.1:74787306-74787325 MS.gene06818:CDS 45.0%
TATGGTTCAACACTTCCACC+AGG + chr3.1:74787165-74787184 MS.gene06818:CDS 45.0%
TGGAAAGGATCAAGGCTCAA+GGG + chr3.1:74785075-74785094 MS.gene06818:intron 45.0%
TTCACATCGAGCTATGCTAC+GGG + chr3.1:74787581-74787600 MS.gene06818:CDS 45.0%
TTCGAGGAACACAACTGAAC+CGG - chr3.1:74787223-74787242 None:intergenic 45.0%
TTGGAAAGGATCAAGGCTCA+AGG + chr3.1:74785074-74785093 MS.gene06818:intron 45.0%
! AAAGAGAATCGGGATTCGGT+TGG - chr3.1:74787831-74787850 None:intergenic 45.0%
! AGAGGTGGTGGTGAAATGAA+AGG + chr3.1:74784582-74784601 MS.gene06818:CDS 45.0%
! CATAAGGGTGTGCCTTTCTT+CGG - chr3.1:74786698-74786717 None:intergenic 45.0%
! GAGGTGGTGGTGAAATGAAA+GGG + chr3.1:74784583-74784602 MS.gene06818:CDS 45.0%
! GCCAGCAATTTTACCAGCAT+TGG + chr3.1:74787453-74787472 MS.gene06818:CDS 45.0%
! TAATGTGAGAAGTGCGTAGC+CGG - chr3.1:74785623-74785642 None:intergenic 45.0%
! TCATCCCAGCAACTTTGAGA+AGG + chr3.1:74786666-74786685 MS.gene06818:CDS 45.0%
!! TGGTGGAAGTGTTGAACCAT+AGG - chr3.1:74787166-74787185 None:intergenic 45.0%
!! AATTAATTTAAGTATTAATA+AGG - chr3.1:74785731-74785750 None:intergenic 5.0%
!! TTAATAATTACAAAAATTAA+GGG + chr3.1:74785128-74785147 MS.gene06818:intron 5.0%
!! TTTAATAATTACAAAAATTA+AGG + chr3.1:74785127-74785146 MS.gene06818:intron 5.0%
!! TTTAATTAATTGTAAATATT+AGG + chr3.1:74784936-74784955 MS.gene06818:intron 5.0%
!!! CAATTTTTTTTTTTTTTTTT+TGG + chr3.1:74784901-74784920 MS.gene06818:intron 5.0%
ACACAAGTCAGAACATCCGG+AGG + chr3.1:74787365-74787384 MS.gene06818:CDS 50.0%
AGTGGAACTGAGAGTAGAGG+TGG + chr3.1:74784567-74784586 MS.gene06818:CDS 50.0%
CAGAACAGCAGCAGTTTCAG+AGG + chr3.1:74787527-74787546 MS.gene06818:CDS 50.0%
CCAGGGTTTCGTACACAATC+AGG + chr3.1:74787183-74787202 MS.gene06818:CDS 50.0%
CCGAATCCCGATTCTCTTTC+TGG + chr3.1:74787832-74787851 MS.gene06818:CDS 50.0%
CCTGATTGTGTACGAAACCC+TGG - chr3.1:74787186-74787205 None:intergenic 50.0%
CTGTTTCCATTTAGACCGCG+AGG - chr3.1:74787315-74787334 None:intergenic 50.0%
GAATCTTGCGACGACATCAC+TGG - chr3.1:74785778-74785797 None:intergenic 50.0%
GAATGCTAGCATCAGTGGTG+AGG + chr3.1:74786480-74786499 MS.gene06818:CDS 50.0%
GAGAAGGTGAGGGAAGAAGA+AGG + chr3.1:74784543-74784562 MS.gene06818:CDS 50.0%
GATTGTGTACGAAACCCTGG+TGG - chr3.1:74787183-74787202 None:intergenic 50.0%
GCTGCTAGTAATCGTTCTGG+CGG + chr3.1:74786107-74786126 MS.gene06818:CDS 50.0%
TCGAGGAACACAACTGAACC+GGG - chr3.1:74787222-74787241 None:intergenic 50.0%
TGCTGTTGCTGATGGCTTGA+AGG + chr3.1:74785525-74785544 MS.gene06818:CDS 50.0%
TTGAGGGCCATTTATGCCAG+CGG - chr3.1:74786039-74786058 None:intergenic 50.0%
TTGCTGATGGCTTGAAGGCA+TGG + chr3.1:74785530-74785549 MS.gene06818:CDS 50.0%
! GAGCAGCTTTATGAACCTCG+CGG + chr3.1:74787297-74787316 MS.gene06818:CDS 50.0%
! TGCTGATGGCTTGAAGGCAT+GGG + chr3.1:74785531-74785550 MS.gene06818:CDS 50.0%
!! ACAACTGAACCGGGCATTGA+TGG - chr3.1:74787213-74787232 None:intergenic 50.0%
!! AGCAGCGTTGTTTTCAGCAG+TGG - chr3.1:74786093-74786112 None:intergenic 50.0%
!! GTCGATTTGCCAGCCATATC+CGG + chr3.1:74785601-74785620 MS.gene06818:CDS 50.0%
GAGCAGCGTCCTCGAGTTAA+AGG + chr3.1:74787793-74787812 MS.gene06818:CDS 55.0%
GCAGTTGCTGCTGTTGCTGA+TGG + chr3.1:74785517-74785536 MS.gene06818:intron 55.0%
GCCATTTATGCCAGCGGTTG+CGG - chr3.1:74786033-74786052 None:intergenic 55.0%
GGAACTGAGAGTAGAGGTGG+TGG + chr3.1:74784570-74784589 MS.gene06818:CDS 55.0%
GGGAGTGGAACTGAGAGTAG+AGG + chr3.1:74784564-74784583 MS.gene06818:CDS 55.0%
GTGAGGGAAGAAGAAGGGAG+TGG + chr3.1:74784549-74784568 MS.gene06818:CDS 55.0%
TCAGGTCCACCATCAATGCC+CGG + chr3.1:74787201-74787220 MS.gene06818:CDS 55.0%
! GAGAAGTGCGTAGCCGGATA+TGG - chr3.1:74785617-74785636 None:intergenic 55.0%
!! ACTGAACCGGGCATTGATGG+TGG - chr3.1:74787210-74787229 None:intergenic 55.0%
AGTGCGTAGCCGGATATGGC+TGG - chr3.1:74785613-74785632 None:intergenic 60.0%
GCCGCAACCGCTGGCATAAA+TGG + chr3.1:74786029-74786048 MS.gene06818:CDS 60.0%
ATCGCGCAGGACAGTCACGC+CGG + chr3.1:74786260-74786279 MS.gene06818:CDS 65.0%
TGTCCTGCGCGATCACTGCC+TGG - chr3.1:74786253-74786272 None:intergenic 65.0%
AGGCCAGGCAGTGATCGCGC+AGG + chr3.1:74786247-74786266 MS.gene06818:CDS 70.0%
CAGCAGTCAGCCGCAACCGC+TGG + chr3.1:74786020-74786039 MS.gene06818:intron 70.0%
GCGCAGGACAGTCACGCCGG+AGG + chr3.1:74786263-74786282 MS.gene06818:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 74784489 74787870 74784489 ID=MS.gene06818
chr3.1 mRNA 74784489 74787870 74784489 ID=MS.gene06818.t1;Parent=MS.gene06818
chr3.1 exon 74784489 74784720 74784489 ID=MS.gene06818.t1.exon1;Parent=MS.gene06818.t1
chr3.1 CDS 74784489 74784720 74784489 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74785521 74785682 74785521 ID=MS.gene06818.t1.exon2;Parent=MS.gene06818.t1
chr3.1 CDS 74785521 74785682 74785521 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74785779 74785909 74785779 ID=MS.gene06818.t1.exon3;Parent=MS.gene06818.t1
chr3.1 CDS 74785779 74785909 74785779 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74786023 74786284 74786023 ID=MS.gene06818.t1.exon4;Parent=MS.gene06818.t1
chr3.1 CDS 74786023 74786284 74786023 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74786371 74786743 74786371 ID=MS.gene06818.t1.exon5;Parent=MS.gene06818.t1
chr3.1 CDS 74786371 74786743 74786371 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74786951 74787659 74786951 ID=MS.gene06818.t1.exon6;Parent=MS.gene06818.t1
chr3.1 CDS 74786951 74787659 74786951 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
chr3.1 exon 74787763 74787870 74787763 ID=MS.gene06818.t1.exon7;Parent=MS.gene06818.t1
chr3.1 CDS 74787763 74787870 74787763 ID=cds.MS.gene06818.t1;Parent=MS.gene06818.t1
Gene Sequence

>MS.gene06818

ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTGAGAGTGGAAGAAGAAGAAGAGAAGGTGAGGGAAGAAGAAGGGAGTGGAACTGAGAGTAGAGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTCTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATTACAGCACTTCTTAGAAAATGCAACTATAAAGGTACTATTTGTATAATTATTATTTTTTCTCTGATTTCATTGTTTTTGTTTTGTAATATTGCTGTGTGTTTAATTGGTTATTCAATTTTTTGTAAGTATTCTCAATTTTCAATTTTATGTGCTCAATTGCTTACTGTCATATGAGCATGTTGCTCTGATTATTCATATTTTTTCATATGTACAATTTTTTTTTTTTTTTTTTGGTGTTAAATTTGATTTAATTAATTGTAAATATTAGGTTATATTGAGGCTGAGTTGTTAATTAAGAGTATATATTTGACATGACAAAAATAAAAAAAAATAAAATAAAAGCTACTAGTAATTAGAAATTTAGAAGTCTTTGGACTGCAAATTTTGGAAAGGATCAAGGCTCAAGGGTGTACTGATAGATTTGTAGATTTTGATGATTTAATAATTACAAAAATTAAGGGGATGGAAAACAAAATTTGTGTACAAATTAATTGAAGACATTTTGTTTTTAATATAGTTTGATAAATTTTTAACTCATGAGAAAAAATGTAAAAAATTATGTATGTTTTTTAAAGAGAAGTGACATGGATTTTGTTAGCTGAGAATCTTAGGAATTTATGACACCTTGAAATAGAGTCTTATAGCAGTATGAAAATTACTAGGTTAAGCCATAAACTTGGTACAATTATTCAATTTATATCTGCGATAAAGATTTTATATTATTGAGTTTTATTATCTTGGTTGTATTGTAATTTGAAAAACAAAATTAGTGTACCTGAAAGTAAATCTAAGTTCTAGAACTTCAAAATAACTTTGATCTGTTTTGAGCAGTTGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTCAAAGGAAGACCGCGCAGTATTGATCTGATACTTACAGAAGTCGATTTGCCAGCCATATCCGGCTACGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAGAGCATCCCTGTCATAAGTATGATATTGAAGATAAATTTTCTTTCTGCTTGTCAATTTTTTTCCTTATTAATACTTAAATTAATTTTTCTGTAATTTTTTCATGCTTTTCCAGTGATGTCGTCGCAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCAGTAGGACTTCTGCTCTCTCAATTTTCAGTTCGTTTTCAGTTTCTCTCTAAAATACTAAGAATTTATTAACAAAATTGGGTGAACTTATGTTTATTATTTGTTTACTCTATCAGCAGTCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGTTTGAAGCCACTGCTGAAAACAACGCTGCTAGTAATCGTTCTGGCGGTGATGCTGCTTGCATTCAAAGAAATAAGGACTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTGCTGAAGCATATCCAAGTGAAATAAAGACACAAGAACTTGACATTCATTTAGGCCAGGCAGTGATCGCGCAGGACAGTCACGCCGGAGGTAAATTTCTTTCTTTCACAGCAATATCATTTTGTTCGACTCGCAAGGAAGAATTGTCAAAAATTTGAACAAACTTTTATTTTTAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGTAAAAATGGAGAGACAAGCGCAAATAATTGCAAGGACGGCAATGATCAAGAGCATTTTAGGAATGCTAGCATCAGTGGTGAGGTTCATGACAATCACTATGTTCAAATTTACTCTACTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTGATCCGAATTGCAGTCTCAAAAATTCATCAATTGATTGCACAGGCAAGTTTGACCATTCTCCACAGTTGGATCTTTCTCTCAGAAGCTCTCATCCCAGCAACTTTGAGAAGGATCTCACCGAAGAAAGGCACACCCTTATGCATTCCAATGCTTCAGCTTTCAAACGGTAATTGCTAAATCCCTTTTTATTCTAATTTTTTCGTTTCTGTGTAATTAAAAATTGTTTTACTCTTAGTGATGAGTTTGAAGAACTTCAAAACATGATACGGATGAAGCTAGCAAGTGTATGATTTTTATGCTTGTGGTCTCTATAACTTCTCCGCTTTGTTGAATTCTGCATGCTTATCACTGAAATGGTGTTCCATTCATGCAGGTATACAAACAGGCAATTGCAAGCGTCACCTGCAGTAGTAATTAACTTCTCTGATCAACAAAGAGAACAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAAGAATCTGAACTTGCAACTTCACATTCTCAGCAAGGGCATTCTCTTCCGATTCCTGTAAAAGGTGTAAGGTTAAATGATCTTTGTATGGCCTATGGTTCAACACTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCCGGTTCAGTTGTGTTCCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAATGTTAAAGAAAATAATTCAGAGCAGCTTTATGAACCTCGCGGTCTAAATGGAAACAGCACTCCAAACCAAATTGTGTATACACAGGAACACAAGTCAGAACATCCGGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGTGTATCCAGTAGTATTTGTAATAATGGAAATGCCAGCAATTTTACCAGCATTGGTTATGGAAGTAATTGCGGAAGTAGCGGCAATGTTGAACAAGTTGCAACTTTCAGAACAGCAGCAGTTTCAGAGGGAAAGAATGAAGAACTCACAAACAGTGGATATTCACATCGAGCTATGCTACGGGAAGCAGCTCTAAACAAGTTCCGTTTGAAACGAAAAGAGAGATGTTATGAAAAGAAGGTATATCAATATCAATATGAGCTTGTAATTATACTAGCATGATCATTGATCAATGATCATCATTGTTTTCATATTATGCTAACTTATTTATACTTTTTAACAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTTGTTCGCCAACCGAATCCCGATTCTCTTTCTGGAGAAAAAGATTGCTAA
Protein sequence

>MS.gene06818.t1

MGEVVMSGEKIVRVEEEEEKVREEEGSGTESRGGGEMKGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCAEAYPSEIKTQELDIHLGQAVIAQDSHAGGLSVANCKNGVASTNNCKNGETSANNCKDGNDQEHFRNASISGEVHDNHYVQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQASPAVVINFSDQQREQKTNNENHNSDSSIPSMQKESELATSHSQQGHSLPIPVKGVRLNDLCMAYGSTLPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSNVKENNSEQLYEPRGLNGNSTPNQIVYTQEHKSEHPEDQRLISPTTDQSVSSSICNNGNASNFTSIGYGSNCGSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPNPDSLSGEKDC