Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069105.t1 | XP_024639555.1 | 98.3 | 719 | 12 | 0 | 1 | 719 | 1 | 719 | 0.00E+00 | 1363.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069105.t1 | A9HF18 | 46.8 | 579 | 287 | 5 | 134 | 699 | 331 | 901 | 5.7e-135 | 483.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069105.t1 | A0A072UF32 | 98.3 | 719 | 12 | 0 | 1 | 719 | 1 | 719 | 0.0e+00 | 1363.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069105 | MS.gene018062 | PPI |
| MS.gene069105 | MS.gene33998 | PPI |
| MS.gene009064 | MS.gene069105 | PPI |
| MS.gene041742 | MS.gene069105 | PPI |
| MS.gene069105 | MS.gene72917 | PPI |
| MS.gene61060 | MS.gene069105 | PPI |
| MS.gene71244 | MS.gene069105 | PPI |
| MS.gene069105 | MS.gene038510 | PPI |
| MS.gene069105 | MS.gene04696 | PPI |
| MS.gene069105 | MS.gene54751 | PPI |
| MS.gene006012 | MS.gene069105 | PPI |
| MS.gene52738 | MS.gene069105 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069105.t1 | MTR_5g032140 | 98.331 | 719 | 12 | 0 | 1 | 719 | 1 | 719 | 0.0 | 1443 |
| MS.gene069105.t1 | MTR_5g032140 | 98.300 | 706 | 12 | 0 | 14 | 719 | 1 | 706 | 0.0 | 1416 |
| MS.gene069105.t1 | MTR_2g064840 | 42.553 | 517 | 276 | 8 | 200 | 704 | 495 | 1002 | 4.85e-119 | 381 |
| MS.gene069105.t1 | MTR_5g029870 | 81.159 | 138 | 23 | 1 | 327 | 464 | 4 | 138 | 4.27e-67 | 218 |
| MS.gene069105.t1 | MTR_1g099000 | 27.013 | 559 | 306 | 21 | 200 | 683 | 749 | 1280 | 6.38e-30 | 127 |
| MS.gene069105.t1 | MTR_1g098970 | 27.646 | 463 | 236 | 18 | 200 | 588 | 235 | 672 | 7.75e-29 | 123 |
| MS.gene069105.t1 | MTR_1g052535 | 28.800 | 250 | 145 | 10 | 191 | 410 | 70 | 316 | 6.11e-13 | 72.0 |
| MS.gene069105.t1 | MTR_3g097250 | 28.333 | 240 | 140 | 7 | 193 | 408 | 70 | 301 | 1.53e-12 | 71.2 |
| MS.gene069105.t1 | MTR_1g052535 | 28.800 | 250 | 145 | 10 | 191 | 410 | 70 | 316 | 1.64e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069105.t1 | AT4G11160 | 63.968 | 741 | 234 | 11 | 7 | 719 | 6 | 741 | 0.0 | 897 |
| MS.gene069105.t1 | AT4G11160 | 63.490 | 745 | 240 | 12 | 1 | 719 | 5 | 743 | 0.0 | 894 |
| MS.gene069105.t1 | AT4G11160 | 65.234 | 512 | 154 | 7 | 38 | 527 | 42 | 551 | 0.0 | 636 |
| MS.gene069105.t1 | AT1G17220 | 42.442 | 516 | 278 | 6 | 200 | 704 | 500 | 1007 | 1.29e-113 | 367 |
| MS.gene069105.t1 | AT1G76810 | 26.620 | 571 | 312 | 19 | 190 | 683 | 695 | 1235 | 1.67e-28 | 123 |
| MS.gene069105.t1 | AT1G21160 | 27.655 | 452 | 250 | 17 | 200 | 588 | 496 | 933 | 1.44e-26 | 117 |
| MS.gene069105.t1 | AT1G76720 | 30.451 | 266 | 136 | 7 | 193 | 410 | 654 | 918 | 1.79e-21 | 100 |
| MS.gene069105.t1 | AT1G76720 | 30.451 | 266 | 136 | 7 | 193 | 410 | 621 | 885 | 1.96e-21 | 100 |
| MS.gene069105.t1 | AT2G27700 | 25.325 | 462 | 248 | 17 | 200 | 588 | 35 | 472 | 3.62e-20 | 94.7 |
| MS.gene069105.t1 | AT2G27700 | 25.486 | 463 | 247 | 17 | 200 | 588 | 35 | 473 | 5.66e-20 | 94.4 |
| MS.gene069105.t1 | AT5G39900 | 34.078 | 179 | 87 | 5 | 204 | 359 | 69 | 239 | 3.43e-14 | 76.6 |
| MS.gene069105.t1 | AT5G13650 | 31.646 | 237 | 127 | 10 | 204 | 410 | 85 | 316 | 1.26e-13 | 75.1 |
| MS.gene069105.t1 | AT5G13650 | 31.646 | 237 | 127 | 10 | 204 | 410 | 86 | 317 | 1.32e-13 | 74.7 |
| MS.gene069105.t1 | AT5G08650 | 26.172 | 256 | 151 | 6 | 182 | 410 | 62 | 306 | 6.16e-13 | 72.8 |
| MS.gene069105.t1 | AT5G08650 | 26.172 | 256 | 151 | 6 | 182 | 410 | 62 | 306 | 6.31e-13 | 72.4 |
Find 198 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTCCGACTTAATAAATT+TGG | 0.122459 | 5.4:+22269461 | None:intergenic |
| CTCACATACTTCTCCCTCTT+TGG | 0.129249 | 5.4:+22272608 | None:intergenic |
| CCGTGTGATTTACCACTTAT+TGG | 0.197956 | 5.4:-22269835 | MS.gene069105:CDS |
| GGCCTTCTCTATTATCAAAT+TGG | 0.244623 | 5.4:+22269803 | None:intergenic |
| TCACATACTTCTCCCTCTTT+GGG | 0.245908 | 5.4:+22272609 | None:intergenic |
| ACCTGAGTCTCGGGTGTACC+TGG | 0.267664 | 5.4:+22269780 | None:intergenic |
| GGAGATGGGTGGGGATATTC+AGG | 0.275437 | 5.4:-22271258 | MS.gene069105:CDS |
| ACTGCCATTTCAACCCTCTT+TGG | 0.276071 | 5.4:+22270774 | None:intergenic |
| GGGACACAGCTTCAAGTGTT+TGG | 0.288016 | 5.4:+22271393 | None:intergenic |
| GTTGAACTGGCAAAGCGTTC+TGG | 0.303622 | 5.4:-22272473 | MS.gene069105:CDS |
| GGACACAGCTTCAAGTGTTT+GGG | 0.304917 | 5.4:+22271394 | None:intergenic |
| TCAATCTCCACAGGCATTGC+TGG | 0.315953 | 5.4:+22270960 | None:intergenic |
| CAGCAACCATGAGGCTTCTA+AGG | 0.317970 | 5.4:-22269647 | MS.gene069105:CDS |
| CTCTCCGACTTAATAAATTT+GGG | 0.320360 | 5.4:+22269462 | None:intergenic |
| GAAATGGCAGTAATTGTAAA+AGG | 0.326721 | 5.4:-22270762 | MS.gene069105:CDS |
| TTCAGAGGGCTTGCTGTTAG+AGG | 0.337080 | 5.4:-22271279 | MS.gene069105:CDS |
| TCCACGTCGGATTGAGAAAT+AGG | 0.351892 | 5.4:+22270234 | None:intergenic |
| AATTGTAAAAGGAGATGTTC+AGG | 0.356652 | 5.4:-22270751 | MS.gene069105:CDS |
| AGTGAAAGGGAGCAAATCTA+AGG | 0.362028 | 5.4:-22269724 | MS.gene069105:CDS |
| AGAGGAAGCTTTACTCCTTC+AGG | 0.368367 | 5.4:-22271192 | MS.gene069105:CDS |
| GATCTTAAAGCACGATTTGA+TGG | 0.369791 | 5.4:-22271158 | MS.gene069105:CDS |
| TTATTGACTGCAACTACAAC+TGG | 0.378111 | 5.4:+22271350 | None:intergenic |
| AATTTGAAGAGGACAGGCTT+AGG | 0.382248 | 5.4:-22270845 | MS.gene069105:CDS |
| TGTGGACAGCATGTGGTTGT+AGG | 0.383019 | 5.4:-22271047 | MS.gene069105:CDS |
| TCAGTATCATCTGAAGTAGT+TGG | 0.393486 | 5.4:+22270804 | None:intergenic |
| GACCTTGTTCGTCTCTTAAG+AGG | 0.400893 | 5.4:-22269602 | MS.gene069105:CDS |
| TATGAACTTTACCAGAGCTT+TGG | 0.407075 | 5.4:-22273411 | MS.gene069105:CDS |
| TTGCCCAGCCACCTGAGTCT+CGG | 0.408386 | 5.4:+22269770 | None:intergenic |
| TGCCCAGCCACCTGAGTCTC+GGG | 0.408821 | 5.4:+22269771 | None:intergenic |
| TAGGTGTGGCTGGTTATAGT+AGG | 0.410197 | 5.4:-22273182 | MS.gene069105:CDS |
| ACTCCTTCAGGCTGATATGA+TGG | 0.413624 | 5.4:-22271180 | MS.gene069105:CDS |
| ACCTATACATGAGTGATTGA+TGG | 0.413770 | 5.4:+22273200 | None:intergenic |
| GCTGCTTGGGTAAGAGATAT+AGG | 0.413831 | 5.4:+22270159 | None:intergenic |
| AGTAATGCCACCAGCTTCCT+TGG | 0.417665 | 5.4:+22271574 | None:intergenic |
| TGCTGCACCTCTTGCTCGCA+TGG | 0.419039 | 5.4:+22271466 | None:intergenic |
| TCAGCATCTAGGTGCCTTTG+TGG | 0.425469 | 5.4:-22271552 | MS.gene069105:CDS |
| GGGCTTGCTGTTAGAGGAGA+TGG | 0.426121 | 5.4:-22271273 | MS.gene069105:CDS |
| CAAGATATTCTCACAACTGT+TGG | 0.433729 | 5.4:-22272431 | MS.gene069105:CDS |
| ATTTGAAGAGGACAGGCTTA+GGG | 0.435192 | 5.4:-22270844 | MS.gene069105:CDS |
| GCTTGCGGTGCATGCATAGT+TGG | 0.436862 | 5.4:-22270201 | MS.gene069105:CDS |
| CCTGAGTCTCGGGTGTACCT+GGG | 0.437418 | 5.4:+22269781 | None:intergenic |
| AGGCATGACCCTTGTTGAAC+TGG | 0.440050 | 5.4:-22272486 | MS.gene069105:CDS |
| TTTGTGGTGGGCATGTCATC+AGG | 0.441533 | 5.4:-22271536 | MS.gene069105:CDS |
| GGGACATGTGGAGCGTCAAC+AGG | 0.446013 | 5.4:+22272563 | None:intergenic |
| TGCTGTTAGAGGAGATGGGT+GGG | 0.449295 | 5.4:-22271268 | MS.gene069105:CDS |
| ACACCCGAGACTCAGGTGGC+TGG | 0.449642 | 5.4:-22269774 | MS.gene069105:CDS |
| AGAGTTTGAGCCTCTCAGTA+TGG | 0.451008 | 5.4:-22272393 | MS.gene069105:CDS |
| AGTGCTTAGAACAAGTAGTT+AGG | 0.451043 | 5.4:-22269488 | MS.gene069105:CDS |
| TGACCCATCACTGTTACAAC+TGG | 0.451970 | 5.4:+22271653 | None:intergenic |
| CTGAATATCTTTGAAGTGAA+AGG | 0.453512 | 5.4:-22269738 | MS.gene069105:CDS |
| TTTGCTGAAGCTTGGAAAGA+AGG | 0.454649 | 5.4:-22273597 | MS.gene069105:intron |
| ACTAGCACGAGTTGCTGCTT+GGG | 0.456407 | 5.4:+22270146 | None:intergenic |
| CACTCATGTATAGGTGTGGC+TGG | 0.456702 | 5.4:-22273192 | MS.gene069105:CDS |
| CGGGCTAGAATGCTTAGTTC+TGG | 0.456720 | 5.4:-22270879 | MS.gene069105:CDS |
| GTGGAGATTGAAGGGCTTCG+AGG | 0.458149 | 5.4:-22270948 | MS.gene069105:CDS |
| TACTAGCACGAGTTGCTGCT+TGG | 0.463126 | 5.4:+22270145 | None:intergenic |
| AAAAGAAATTTGAAGAGGAC+AGG | 0.464360 | 5.4:-22270851 | MS.gene069105:CDS |
| TCCATGCTAGCTCACAAGTC+TGG | 0.464520 | 5.4:-22272664 | MS.gene069105:CDS |
| AGGGAGAAGTATGTGAGAAA+AGG | 0.466796 | 5.4:-22272602 | MS.gene069105:CDS |
| GTCTCTTAAGAGGGAGAAGC+AGG | 0.467286 | 5.4:-22269592 | MS.gene069105:CDS |
| GCTGGTTGCAAAGTTGTTGA+AGG | 0.470555 | 5.4:-22269684 | MS.gene069105:CDS |
| CACATACTTCTCCCTCTTTG+GGG | 0.478433 | 5.4:+22272610 | None:intergenic |
| GGTTCCAAAGAGGGTTGAAA+TGG | 0.481754 | 5.4:-22270778 | MS.gene069105:CDS |
| ACCAGACTTGTGAGCTAGCA+TGG | 0.483849 | 5.4:+22272663 | None:intergenic |
| TCATTTCTGTTGCAGGAAGT+TGG | 0.487950 | 5.4:-22271731 | MS.gene069105:intron |
| CACCCGAGACTCAGGTGGCT+GGG | 0.489836 | 5.4:-22269773 | MS.gene069105:CDS |
| CAGTATCATCTGAAGTAGTT+GGG | 0.490528 | 5.4:+22270805 | None:intergenic |
| TCCATCAATCACTCATGTAT+AGG | 0.490932 | 5.4:-22273201 | MS.gene069105:CDS |
| CTTCGAGGGCTGCCAATGGC+CGG | 0.490970 | 5.4:-22270933 | MS.gene069105:CDS |
| ATGGCGGCTTTGCTGAAGCT+TGG | 0.492064 | 5.4:-22273605 | MS.gene069105:CDS |
| AAGTTGGCGTCAATGTTAAG+AGG | 0.492222 | 5.4:-22271715 | MS.gene069105:CDS |
| TATTTCTGAGCTTGCTGCAA+TGG | 0.496708 | 5.4:-22272369 | MS.gene069105:intron |
| TTGGTTGCAGTGACTTTACA+AGG | 0.501046 | 5.4:+22272542 | None:intergenic |
| GCATCTAGGTGCCTTTGTGG+TGG | 0.501908 | 5.4:-22271549 | MS.gene069105:CDS |
| CCCAGGTACACCCGAGACTC+AGG | 0.503358 | 5.4:-22269781 | MS.gene069105:CDS |
| AATGTTGTCCATGTTGGCGT+GGG | 0.504531 | 5.4:-22270258 | MS.gene069105:CDS |
| TGATGCTGCAGCCAAAGCTC+TGG | 0.507742 | 5.4:+22273400 | None:intergenic |
| ATGCACCGCAAGCCTGTGCT+AGG | 0.507826 | 5.4:+22270211 | None:intergenic |
| TGTTGTTCATTCTGAGGAGC+GGG | 0.508874 | 5.4:-22270898 | MS.gene069105:CDS |
| TGACAAAGGACGGGGTCCAT+TGG | 0.510063 | 5.4:-22271102 | MS.gene069105:CDS |
| AGGTGTGGCTGGTTATAGTA+GGG | 0.511100 | 5.4:-22273181 | MS.gene069105:CDS |
| ATCACATTTCTCGACACTCC+TGG | 0.512405 | 5.4:-22271506 | MS.gene069105:CDS |
| TGAATATCTTTGAAGTGAAA+GGG | 0.513439 | 5.4:-22269737 | MS.gene069105:CDS |
| TCAGTGGCAGCCAAGGAAGC+TGG | 0.515550 | 5.4:-22271584 | MS.gene069105:CDS |
| GACAACTTTGAATAGTCCTC+AGG | 0.516512 | 5.4:-22270700 | MS.gene069105:intron |
| CATCTAGGTGCCTTTGTGGT+GGG | 0.518300 | 5.4:-22271548 | MS.gene069105:CDS |
| TCTGTGAATGTTGTCCATGT+TGG | 0.519196 | 5.4:-22270264 | MS.gene069105:CDS |
| GCAATGCCTGTGGAGATTGA+AGG | 0.520519 | 5.4:-22270957 | MS.gene069105:CDS |
| TTGCTGTTAGAGGAGATGGG+TGG | 0.521268 | 5.4:-22271269 | MS.gene069105:CDS |
| TATAGTGAAGGCAGGAACTC+TGG | 0.522527 | 5.4:-22271072 | MS.gene069105:CDS |
| AGCAACTCGTGCTAGTATCA+AGG | 0.524569 | 5.4:-22270139 | MS.gene069105:intron |
| TGGCTACGTCTTCCAATAAG+TGG | 0.526211 | 5.4:+22269823 | None:intergenic |
| AAAACGATAGAAATATTTGA+AGG | 0.527056 | 5.4:-22272506 | MS.gene069105:CDS |
| GCACTAAATGCAGCGTGACC+AGG | 0.528840 | 5.4:+22271488 | None:intergenic |
| AGGGCTATTAAAGATGCAGC+AGG | 0.529509 | 5.4:-22271005 | MS.gene069105:CDS |
| TGGAGATTGAAGGGCTTCGA+GGG | 0.531700 | 5.4:-22270947 | MS.gene069105:CDS |
| CGAAGCCCTTCAATCTCCAC+AGG | 0.532610 | 5.4:+22270951 | None:intergenic |
| GCATCATGTAGGCATGTGGT+AGG | 0.533926 | 5.4:-22273383 | MS.gene069105:CDS |
| TAAGAGGGAGAAGCAGGATG+TGG | 0.534191 | 5.4:-22269586 | MS.gene069105:CDS |
| GCATCAGCAAGATGCATGGC+TGG | 0.536350 | 5.4:-22273320 | MS.gene069105:intron |
| GAAGCCCAAATTTATTAAGT+CGG | 0.536909 | 5.4:-22269466 | MS.gene069105:CDS |
| ACCACTCCTTAGAAGCCTCA+TGG | 0.539540 | 5.4:+22269641 | None:intergenic |
| TCCTCCAGTTGTAACAGTGA+TGG | 0.540721 | 5.4:-22271657 | MS.gene069105:CDS |
| GCTTCTAAGGAGTGGTGAAA+TGG | 0.543450 | 5.4:-22269634 | MS.gene069105:CDS |
| AGCAAGACTTGACAAAGGAC+GGG | 0.546869 | 5.4:-22271111 | MS.gene069105:CDS |
| TGCCACTGACGTTTGACGCA+AGG | 0.548783 | 5.4:+22271598 | None:intergenic |
| AGGGCTTCGAGGGCTGCCAA+TGG | 0.550201 | 5.4:-22270937 | MS.gene069105:CDS |
| TTTAGTGCCATGCGAGCAAG+AGG | 0.552994 | 5.4:-22271473 | MS.gene069105:CDS |
| AAGCAAGACTTGACAAAGGA+CGG | 0.557705 | 5.4:-22271112 | MS.gene069105:CDS |
| TCAAACGTCAGTGGCAGCCA+AGG | 0.557842 | 5.4:-22271591 | MS.gene069105:CDS |
| GGACTAAAGAATGTGGAATA+CGG | 0.557860 | 5.4:-22273158 | MS.gene069105:intron |
| AAGGCAGGAACTCTGGTTTG+TGG | 0.559091 | 5.4:-22271065 | MS.gene069105:CDS |
| GGTGGCATTACTCAGCATCT+AGG | 0.559213 | 5.4:-22271563 | MS.gene069105:CDS |
| TGTGGTTGTAGGCTCGCAGT+GGG | 0.559390 | 5.4:-22271036 | MS.gene069105:CDS |
| GTGGAGCGTCAACAGGAGGC+TGG | 0.559395 | 5.4:+22272570 | None:intergenic |
| AAAACTACAGCTTGCTTCAG+AGG | 0.559700 | 5.4:-22271294 | MS.gene069105:CDS |
| ATGACATCGTCACCGGCCAT+TGG | 0.561870 | 5.4:+22270921 | None:intergenic |
| GGACCTGATGTGAAAATAGC+TGG | 0.562195 | 5.4:-22269702 | MS.gene069105:CDS |
| ACCTTGTTCGTCTCTTAAGA+GGG | 0.563673 | 5.4:-22269601 | MS.gene069105:CDS |
| TGTCATTGTTGTTCATTCTG+AGG | 0.565978 | 5.4:-22270904 | MS.gene069105:CDS |
| CAATGCCTGTGGAGATTGAA+GGG | 0.566706 | 5.4:-22270956 | MS.gene069105:CDS |
| TCAACCACATATGCTTGAGC+AGG | 0.566940 | 5.4:+22271134 | None:intergenic |
| ATTGTAAAAGGAGATGTTCA+GGG | 0.570554 | 5.4:-22270750 | MS.gene069105:CDS |
| CCTCCAGTTGTAACAGTGAT+GGG | 0.572114 | 5.4:-22271656 | MS.gene069105:CDS |
| GATGTGGATTCTGTGAAGAA+AGG | 0.574209 | 5.4:-22269570 | MS.gene069105:CDS |
| GCTGTTAGAGGAGATGGGTG+GGG | 0.576180 | 5.4:-22271267 | MS.gene069105:CDS |
| AACAACAATGACATCGTCAC+CGG | 0.576261 | 5.4:+22270914 | None:intergenic |
| CTAGTTGTTGCTGCAGATGA+CGG | 0.576535 | 5.4:-22271425 | MS.gene069105:CDS |
| TTGATAATAGAGAAGGCCCC+AGG | 0.576931 | 5.4:-22269798 | MS.gene069105:CDS |
| TACTGAGGAGGTTCCAAAGA+GGG | 0.576993 | 5.4:-22270787 | MS.gene069105:CDS |
| AAGAGGTTACATTCAACTGA+AGG | 0.577737 | 5.4:-22271698 | MS.gene069105:CDS |
| CTTTGGCTGCAGCATCATGT+AGG | 0.578766 | 5.4:-22273394 | MS.gene069105:CDS |
| AGCCAATTTGATAATAGAGA+AGG | 0.578957 | 5.4:-22269805 | MS.gene069105:CDS |
| ATCCGACGTGGACCTAGCAC+AGG | 0.580355 | 5.4:-22270223 | MS.gene069105:CDS |
| AAACTACAGCTTGCTTCAGA+GGG | 0.580982 | 5.4:-22271293 | MS.gene069105:CDS |
| GAATGTTGTCCATGTTGGCG+TGG | 0.582983 | 5.4:-22270259 | MS.gene069105:CDS |
| GGCTTGCTGTTAGAGGAGAT+GGG | 0.584783 | 5.4:-22271272 | MS.gene069105:CDS |
| TCAAGAAGTGATGCAGCGTA+TGG | 0.585039 | 5.4:-22272641 | MS.gene069105:CDS |
| TGGTCCTGCTCAAGCATATG+TGG | 0.587486 | 5.4:-22271138 | MS.gene069105:CDS |
| ACATACTTCTCCCTCTTTGG+GGG | 0.587717 | 5.4:+22272611 | None:intergenic |
| AGTGGTGAAATGGTGTTTGA+AGG | 0.587901 | 5.4:-22269624 | MS.gene069105:CDS |
| AACGCTTTGCCAGTTCAACA+AGG | 0.589366 | 5.4:+22272477 | None:intergenic |
| TCTGGTTTGTGGACAGCATG+TGG | 0.590833 | 5.4:-22271054 | MS.gene069105:CDS |
| ATGTGGTTGTAGGCTCGCAG+TGG | 0.591331 | 5.4:-22271037 | MS.gene069105:CDS |
| CTGAGTCTCGGGTGTACCTG+GGG | 0.593935 | 5.4:+22269782 | None:intergenic |
| GTGACTACTATAGTGAAGGC+AGG | 0.594123 | 5.4:-22271080 | MS.gene069105:CDS |
| AAATTTATTAAGTCGGAGAG+TGG | 0.594592 | 5.4:-22269459 | MS.gene069105:CDS |
| TTGTTGTTCATTCTGAGGAG+CGG | 0.596000 | 5.4:-22270899 | MS.gene069105:CDS |
| GAAGGAGTAAAGCTTCCTCT+AGG | 0.596889 | 5.4:+22271195 | None:intergenic |
| AAATAGGCCCCACGCCAACA+TGG | 0.597607 | 5.4:+22270250 | None:intergenic |
| TTGACGCAAGGCATCAAGAA+GGG | 0.602671 | 5.4:+22271610 | None:intergenic |
| CCCATCACTGTTACAACTGG+AGG | 0.604246 | 5.4:+22271656 | None:intergenic |
| GATCCATCATATCAGCCTGA+AGG | 0.609133 | 5.4:+22271177 | None:intergenic |
| CCAATAAGTGGTAAATCACA+CGG | 0.614579 | 5.4:+22269835 | None:intergenic |
| GTCAATAAATGTGATAAACC+AGG | 0.615284 | 5.4:-22271335 | MS.gene069105:CDS |
| TTTGAAGAGGACAGGCTTAG+GGG | 0.616568 | 5.4:-22270843 | MS.gene069105:CDS |
| TTCACTATAGTAGTCACCAA+TGG | 0.618438 | 5.4:+22271086 | None:intergenic |
| TTTGACGCAAGGCATCAAGA+AGG | 0.619099 | 5.4:+22271609 | None:intergenic |
| ACTGTTACAACTGGAGGACG+TGG | 0.619466 | 5.4:+22271662 | None:intergenic |
| CTAGAATGCTTAGTTCTGGT+AGG | 0.622551 | 5.4:-22270875 | MS.gene069105:CDS |
| ATTGGTGACTACTATAGTGA+AGG | 0.629654 | 5.4:-22271084 | MS.gene069105:CDS |
| GTGATGGGTCATGTTGATCA+CGG | 0.630061 | 5.4:-22271641 | MS.gene069105:CDS |
| GTGAAAGGGAGCAAATCTAA+GGG | 0.630238 | 5.4:-22269723 | MS.gene069105:CDS |
| ACCATGAGGCTTCTAAGGAG+TGG | 0.630459 | 5.4:-22269642 | MS.gene069105:CDS |
| CAATCACTCATGTATAGGTG+TGG | 0.635269 | 5.4:-22273196 | MS.gene069105:CDS |
| GACACAGCTTCAAGTGTTTG+GGG | 0.635718 | 5.4:+22271395 | None:intergenic |
| GTGACTTTACAAGGGACATG+TGG | 0.635985 | 5.4:+22272551 | None:intergenic |
| CATCATGTAGGCATGTGGTA+GGG | 0.636284 | 5.4:-22273382 | MS.gene069105:CDS |
| GTGGCAGCCAAGGAAGCTGG+TGG | 0.636567 | 5.4:-22271581 | MS.gene069105:CDS |
| AGCAACTCCAGCAATGCCTG+TGG | 0.638181 | 5.4:-22270967 | MS.gene069105:CDS |
| TGCCTTGCGTCAAACGTCAG+TGG | 0.640297 | 5.4:-22271600 | MS.gene069105:CDS |
| GCCTATTTCTCAATCCGACG+TGG | 0.644268 | 5.4:-22270235 | MS.gene069105:CDS |
| GTGAAGAAAGGAAATGAGTG+TGG | 0.647644 | 5.4:-22269558 | MS.gene069105:CDS |
| ACGCTTTGCCAGTTCAACAA+GGG | 0.649253 | 5.4:+22272478 | None:intergenic |
| TACTTCAGATGATACTGAGG+AGG | 0.649683 | 5.4:-22270799 | MS.gene069105:CDS |
| GTGTGGCTGGTTATAGTAGG+GGG | 0.652719 | 5.4:-22273179 | MS.gene069105:CDS |
| ACATGTGGAGCGTCAACAGG+AGG | 0.655846 | 5.4:+22272566 | None:intergenic |
| AACTACTTCAGATGATACTG+AGG | 0.662017 | 5.4:-22270802 | MS.gene069105:CDS |
| TGATGACATGCCCACCACAA+AGG | 0.668029 | 5.4:+22271538 | None:intergenic |
| GCAAGACTTGACAAAGGACG+GGG | 0.668444 | 5.4:-22271110 | MS.gene069105:CDS |
| TCCCTCTTAAGAGACGAACA+AGG | 0.676356 | 5.4:+22269600 | None:intergenic |
| AGGTACACCCGAGACTCAGG+TGG | 0.677615 | 5.4:-22269778 | MS.gene069105:CDS |
| GTGGACCTAGCACAGGCTTG+CGG | 0.681130 | 5.4:-22270216 | MS.gene069105:CDS |
| GGTGTGGCTGGTTATAGTAG+GGG | 0.682056 | 5.4:-22273180 | MS.gene069105:CDS |
| GACTGGACTGGATAACCTAG+AGG | 0.686970 | 5.4:-22271210 | MS.gene069105:CDS |
| TGAACAGGACAGCAACCATG+AGG | 0.689237 | 5.4:-22269656 | MS.gene069105:CDS |
| TGGTTGCAGTGACTTTACAA+GGG | 0.689581 | 5.4:+22272543 | None:intergenic |
| TTATGCATCAGCAAGATGCA+TGG | 0.690151 | 5.4:-22273324 | MS.gene069105:CDS |
| GCTTGGGTAAGAGATATAGG+TGG | 0.690336 | 5.4:+22270162 | None:intergenic |
| TGCAGCATCATGTAGGCATG+TGG | 0.692322 | 5.4:-22273387 | MS.gene069105:CDS |
| AGCCTGTGCTAGGTCCACGT+CGG | 0.697377 | 5.4:+22270221 | None:intergenic |
| ATGTTGTCCATGTTGGCGTG+GGG | 0.699834 | 5.4:-22270257 | MS.gene069105:CDS |
| GGGCTATTAAAGATGCAGCA+GGG | 0.703729 | 5.4:-22271004 | MS.gene069105:CDS |
| TCAGAAATATCCATACTGAG+AGG | 0.707747 | 5.4:+22272383 | None:intergenic |
| GTTGAAGCAAGACTTGACAA+AGG | 0.724961 | 5.4:-22271116 | MS.gene069105:CDS |
| ATACTGAGGAGGTTCCAAAG+AGG | 0.728916 | 5.4:-22270788 | MS.gene069105:CDS |
| CTATTAAAGATGCAGCAGGG+AGG | 0.743526 | 5.4:-22271001 | MS.gene069105:CDS |
| GTGGTTGTAGGCTCGCAGTG+GGG | 0.772193 | 5.4:-22271035 | MS.gene069105:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr5.4:22272602-22272621 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAGGAAAA+AGG | + | chr5.4:22272596-22272615 | None:intergenic | 10.0% |
| !! | AAATAAGGCAAAAAAAAAAA+AGG | + | chr5.4:22271164-22271183 | None:intergenic | 15.0% |
| !! | TGGTTATTATAACTATAATA+TGG | - | chr5.4:22272372-22272391 | MS.gene069105:CDS | 15.0% |
| !! | TTTATTTATATCTCAACATT+TGG | + | chr5.4:22272667-22272686 | None:intergenic | 15.0% |
| !!! | ATTTAGTCTTTAAAATTGTA+AGG | + | chr5.4:22273098-22273117 | None:intergenic | 15.0% |
| !!! | TACAATTTTAAAGACTAAAT+TGG | - | chr5.4:22273098-22273117 | MS.gene069105:intron | 15.0% |
| !! | AAAACGATAGAAATATTTGA+AGG | - | chr5.4:22270536-22270555 | MS.gene069105:intron | 20.0% |
| !! | ACAAGTAAATATAAAACAGT+AGG | - | chr5.4:22272503-22272522 | MS.gene069105:CDS | 20.0% |
| !! | AGCTATATACACTTTATTAT+AGG | + | chr5.4:22269561-22269580 | None:intergenic | 20.0% |
| !! | ATTGTAGCATTATTATACTT+GGG | - | chr5.4:22271128-22271147 | MS.gene069105:CDS | 20.0% |
| !! | GCTAATAATACTGTAATAAA+TGG | - | chr5.4:22270173-22270192 | MS.gene069105:CDS | 20.0% |
| !!! | AATATTTCTATCGTTTTATC+AGG | + | chr5.4:22270533-22270552 | None:intergenic | 20.0% |
| !!! | GACTGAAAATTTTCAAATTT+AGG | + | chr5.4:22273035-22273054 | None:intergenic | 20.0% |
| !!! | TAATTAGTTTTGTTTTACGT+TGG | - | chr5.4:22270347-22270366 | MS.gene069105:intron | 20.0% |
| !!! | TTTACACAATTTAGAATGAA+AGG | + | chr5.4:22269500-22269519 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGCCTTATTTC+TGG | - | chr5.4:22271165-22271184 | MS.gene069105:CDS | 20.0% |
| ! | AATAAGTAATCGATAGTACT+AGG | - | chr5.4:22271056-22271075 | MS.gene069105:CDS | 25.0% |
| ! | AATATGCATAGGAAAGTAAA+AGG | - | chr5.4:22271031-22271050 | MS.gene069105:CDS | 25.0% |
| ! | AATTGTTAGCATTACAGTTT+AGG | - | chr5.4:22269943-22269962 | MS.gene069105:intron | 25.0% |
| ! | ACAAAGCAGTACATAAATTA+CGG | + | chr5.4:22270085-22270104 | None:intergenic | 25.0% |
| ! | ACAACAGATAGTGTATTAAT+CGG | - | chr5.4:22272463-22272482 | MS.gene069105:CDS | 25.0% |
| ! | AGTGACATTAGTTGAAAATT+TGG | - | chr5.4:22270276-22270295 | MS.gene069105:intron | 25.0% |
| ! | ATATGCATAGGAAAGTAAAA+GGG | - | chr5.4:22271032-22271051 | MS.gene069105:CDS | 25.0% |
| ! | ATTTCTATTTGATATCCGTT+TGG | - | chr5.4:22273160-22273179 | MS.gene069105:CDS | 25.0% |
| ! | CATTGTAGCATTATTATACT+TGG | - | chr5.4:22271127-22271146 | MS.gene069105:CDS | 25.0% |
| ! | CTGCATTCAGATAATAAAAA+GGG | + | chr5.4:22269603-22269622 | None:intergenic | 25.0% |
| ! | GATATGCATAAAATTACAGA+GGG | - | chr5.4:22270039-22270058 | MS.gene069105:intron | 25.0% |
| ! | GATGTTAAATCAGTGAATAT+AGG | - | chr5.4:22270718-22270737 | MS.gene069105:CDS | 25.0% |
| ! | GATTACTCATAGTTAAATAC+AGG | + | chr5.4:22272944-22272963 | None:intergenic | 25.0% |
| ! | GTATAATAATGCTACAATGA+TGG | + | chr5.4:22271126-22271145 | None:intergenic | 25.0% |
| ! | TAGGAAAAAGAAATTTGAAG+AGG | - | chr5.4:22272186-22272205 | MS.gene069105:intron | 25.0% |
| ! | TCATAGTTAAATACAGGAAA+AGG | + | chr5.4:22272938-22272957 | None:intergenic | 25.0% |
| ! | TCTGCATTCAGATAATAAAA+AGG | + | chr5.4:22269604-22269623 | None:intergenic | 25.0% |
| !! | TTGACTTTTATAATAAGCAC+CGG | - | chr5.4:22269472-22269491 | MS.gene069105:CDS | 25.0% |
| !!! | AATCACACAAATTTTAGCAT+TGG | + | chr5.4:22270240-22270259 | None:intergenic | 25.0% |
| !!! | AATGTTTTGATGGAAATCAA+TGG | - | chr5.4:22270930-22270949 | MS.gene069105:CDS | 25.0% |
| !!! | CTTTTCCTTAAATTGATAGT+TGG | - | chr5.4:22270966-22270985 | MS.gene069105:CDS | 25.0% |
| !!! | GAACTACATGATGATTTTTT+AGG | - | chr5.4:22271248-22271267 | MS.gene069105:CDS | 25.0% |
| !!! | GAGAAGTTAGTTTACTTTTA+AGG | - | chr5.4:22270017-22270036 | MS.gene069105:intron | 25.0% |
| !!! | TGAATATCTTTGAAGTGAAA+GGG | - | chr5.4:22273305-22273324 | MS.gene069105:intron | 25.0% |
| !!! | TGAATTTTTCAAGCATCTTT+CGG | - | chr5.4:22270199-22270218 | MS.gene069105:CDS | 25.0% |
| !!! | TTTTTAGTTGCTTGAGATAA+AGG | - | chr5.4:22270899-22270918 | MS.gene069105:CDS | 25.0% |
| AAAAGAAATTTGAAGAGGAC+AGG | - | chr5.4:22272191-22272210 | MS.gene069105:intron | 30.0% | |
| AAAATTTGTGTGATTGCACA+TGG | - | chr5.4:22270245-22270264 | MS.gene069105:CDS | 30.0% | |
| AAAGGCTAACAAACAAGTAT+TGG | + | chr5.4:22270766-22270785 | None:intergenic | 30.0% | |
| AAATTTATTAAGTCGGAGAG+TGG | - | chr5.4:22273583-22273602 | MS.gene069105:intron | 30.0% | |
| AACATCTTCTATGACTAAGA+AGG | + | chr5.4:22270704-22270723 | None:intergenic | 30.0% | |
| AATACACTATCTGTTGTTGA+CGG | + | chr5.4:22272460-22272479 | None:intergenic | 30.0% | |
| AATTGTAAAAGGAGATGTTC+AGG | - | chr5.4:22272291-22272310 | MS.gene069105:intron | 30.0% | |
| ACTCTCCGACTTAATAAATT+TGG | + | chr5.4:22273584-22273603 | None:intergenic | 30.0% | |
| AGTATACAATAAACAAGTGC+TGG | + | chr5.4:22269783-22269802 | None:intergenic | 30.0% | |
| AGTTGACGTCTTATAATCTT+AGG | + | chr5.4:22272979-22272998 | None:intergenic | 30.0% | |
| ATATCTCAACATTTGGACAA+AGG | + | chr5.4:22272660-22272679 | None:intergenic | 30.0% | |
| ATATTGTGCCTTACAACAAA+TGG | + | chr5.4:22271016-22271035 | None:intergenic | 30.0% | |
| ATTACAGTTTAGGTGGTTTA+AGG | - | chr5.4:22269953-22269972 | MS.gene069105:intron | 30.0% | |
| ATTGTAAAAGGAGATGTTCA+GGG | - | chr5.4:22272292-22272311 | MS.gene069105:intron | 30.0% | |
| CAATGCCAACTATCAATTTA+AGG | + | chr5.4:22270974-22270993 | None:intergenic | 30.0% | |
| CATTCTGTAATTTCGTTGTT+AGG | - | chr5.4:22272753-22272772 | MS.gene069105:intron | 30.0% | |
| CTAACAACGAAATTACAGAA+TGG | + | chr5.4:22272755-22272774 | None:intergenic | 30.0% | |
| CTCTCCGACTTAATAAATTT+GGG | + | chr5.4:22273583-22273602 | None:intergenic | 30.0% | |
| GAAAACAAATATCCACAAAC+AGG | + | chr5.4:22271276-22271295 | None:intergenic | 30.0% | |
| GAAAGATGCTTGAAAAATTC+AGG | + | chr5.4:22270200-22270219 | None:intergenic | 30.0% | |
| GAAATGGCAGTAATTGTAAA+AGG | - | chr5.4:22272280-22272299 | MS.gene069105:intron | 30.0% | |
| GAAGCCCAAATTTATTAAGT+CGG | - | chr5.4:22273576-22273595 | MS.gene069105:intron | 30.0% | |
| GGATATGCATAAAATTACAG+AGG | - | chr5.4:22270038-22270057 | MS.gene069105:intron | 30.0% | |
| GGTACTTATAAGTAAAAAGC+TGG | - | chr5.4:22270297-22270316 | MS.gene069105:intron | 30.0% | |
| GTCAATAAATGTGATAAACC+AGG | - | chr5.4:22271707-22271726 | MS.gene069105:CDS | 30.0% | |
| GTTGACGTCTTATAATCTTA+GGG | + | chr5.4:22272978-22272997 | None:intergenic | 30.0% | |
| TAAGATCACATTAATCAGCA+TGG | - | chr5.4:22272556-22272575 | MS.gene069105:CDS | 30.0% | |
| TATTGTGCCTTACAACAAAT+GGG | + | chr5.4:22271015-22271034 | None:intergenic | 30.0% | |
| TATTTGATATCCGTTTGGTT+TGG | - | chr5.4:22273165-22273184 | MS.gene069105:CDS | 30.0% | |
| TCATGTAGTTCAAAACAAGA+AGG | + | chr5.4:22271239-22271258 | None:intergenic | 30.0% | |
| ! | AACAAGCTGTCATTTACAAA+TGG | + | chr5.4:22270791-22270810 | None:intergenic | 30.0% |
| ! | AACTGTTGTGATTTTCAGAT+TGG | - | chr5.4:22273520-22273539 | MS.gene069105:intron | 30.0% |
| ! | AATTTGTTCATTTCTGTTGC+AGG | - | chr5.4:22271304-22271323 | MS.gene069105:CDS | 30.0% |
| ! | ACAAGCTGTCATTTACAAAT+GGG | + | chr5.4:22270790-22270809 | None:intergenic | 30.0% |
| ! | AGCCAATTTGATAATAGAGA+AGG | - | chr5.4:22273237-22273256 | MS.gene069105:intron | 30.0% |
| ! | CGTTTTATCAGGATTAGATT+TGG | + | chr5.4:22270522-22270541 | None:intergenic | 30.0% |
| ! | CTTAAATTGATAGTTGGCAT+TGG | - | chr5.4:22270972-22270991 | MS.gene069105:CDS | 30.0% |
| ! | TGTCATTTACAAATGGGAAA+AGG | + | chr5.4:22270784-22270803 | None:intergenic | 30.0% |
| ! | TTTGTAAATGACAGCTTGTT+AGG | - | chr5.4:22270791-22270810 | MS.gene069105:CDS | 30.0% |
| !! | AGTTGATAGGTATACTACAT+CGG | - | chr5.4:22270106-22270125 | MS.gene069105:intron | 30.0% |
| !! | CTGAATATCTTTGAAGTGAA+AGG | - | chr5.4:22273304-22273323 | MS.gene069105:intron | 30.0% |
| !! | TACATTAGCTGATTTTGCAT+GGG | + | chr5.4:22271672-22271691 | None:intergenic | 30.0% |
| !! | TTGTAAATGACAGCTTGTTA+GGG | - | chr5.4:22270792-22270811 | MS.gene069105:CDS | 30.0% |
| !!! | AGCTGTAGTTTTACTTTTTC+AGG | + | chr5.4:22271740-22271759 | None:intergenic | 30.0% |
| !!! | ATTTTTTAGGTTCCTGTTTG+TGG | - | chr5.4:22271261-22271280 | MS.gene069105:CDS | 30.0% |
| AAATAAAACCCCCTGCAAAA+TGG | + | chr5.4:22269536-22269555 | None:intergenic | 35.0% | |
| AACTACTTCAGATGATACTG+AGG | - | chr5.4:22272240-22272259 | MS.gene069105:intron | 35.0% | |
| AAGAGGTTACATTCAACTGA+AGG | - | chr5.4:22271344-22271363 | MS.gene069105:CDS | 35.0% | |
| AATACTCCTGATTGGTAGAT+TGG | - | chr5.4:22270133-22270152 | MS.gene069105:intron | 35.0% | |
| ACCTATACATGAGTGATTGA+TGG | + | chr5.4:22269845-22269864 | None:intergenic | 35.0% | |
| AGTGCTTAGAACAAGTAGTT+AGG | - | chr5.4:22273554-22273573 | MS.gene069105:intron | 35.0% | |
| ATAAAATTACAGAGGGATGG+GGG | - | chr5.4:22270046-22270065 | MS.gene069105:intron | 35.0% | |
| ATACTCCTGATTGGTAGATT+GGG | - | chr5.4:22270134-22270153 | MS.gene069105:intron | 35.0% | |
| ATTGTGCCTTACAACAAATG+GGG | + | chr5.4:22271014-22271033 | None:intergenic | 35.0% | |
| CAAGATATTCTCACAACTGT+TGG | - | chr5.4:22270611-22270630 | MS.gene069105:intron | 35.0% | |
| CATAAAATTACAGAGGGATG+GGG | - | chr5.4:22270045-22270064 | MS.gene069105:intron | 35.0% | |
| CCAATAAGTGGTAAATCACA+CGG | + | chr5.4:22273210-22273229 | None:intergenic | 35.0% | |
| GAGTCAATGATCCAGAAATA+AGG | + | chr5.4:22271179-22271198 | None:intergenic | 35.0% | |
| GATCTTAAAGCACGATTTGA+TGG | - | chr5.4:22271884-22271903 | MS.gene069105:intron | 35.0% | |
| GCATAAAATTACAGAGGGAT+GGG | - | chr5.4:22270044-22270063 | MS.gene069105:intron | 35.0% | |
| GGACTAAAGAATGTGGAATA+CGG | - | chr5.4:22269884-22269903 | MS.gene069105:intron | 35.0% | |
| GGCCTTCTCTATTATCAAAT+TGG | + | chr5.4:22273242-22273261 | None:intergenic | 35.0% | |
| GTAGTTCAAAACAAGAAGGA+GGG | + | chr5.4:22271235-22271254 | None:intergenic | 35.0% | |
| TAATAACCATCACATACCTG+AGG | + | chr5.4:22272361-22272380 | None:intergenic | 35.0% | |
| TAGTTCAAAACAAGAAGGAG+GGG | + | chr5.4:22271234-22271253 | None:intergenic | 35.0% | |
| TATGAACTTTACCAGAGCTT+TGG | - | chr5.4:22269631-22269650 | MS.gene069105:CDS | 35.0% | |
| TCAGAAATATCCATACTGAG+AGG | + | chr5.4:22270662-22270681 | None:intergenic | 35.0% | |
| TCCATCAATCACTCATGTAT+AGG | - | chr5.4:22269841-22269860 | MS.gene069105:CDS | 35.0% | |
| TGCATAAAATTACAGAGGGA+TGG | - | chr5.4:22270043-22270062 | MS.gene069105:intron | 35.0% | |
| TGTAGTTCAAAACAAGAAGG+AGG | + | chr5.4:22271236-22271255 | None:intergenic | 35.0% | |
| TGTTAGCATTACAGTTTAGG+TGG | - | chr5.4:22269946-22269965 | MS.gene069105:intron | 35.0% | |
| TTAAGGATGACAGCATCATT+TGG | - | chr5.4:22269970-22269989 | MS.gene069105:intron | 35.0% | |
| TTCACTATAGTAGTCACCAA+TGG | + | chr5.4:22271959-22271978 | None:intergenic | 35.0% | |
| TTGGAATCAAAAGACGATAC+TGG | + | chr5.4:22270747-22270766 | None:intergenic | 35.0% | |
| TTGTAAGGCACAATATGCAT+AGG | - | chr5.4:22271020-22271039 | MS.gene069105:CDS | 35.0% | |
| ! | ACAATTATCCATTTTGCAGG+GGG | - | chr5.4:22269525-22269544 | MS.gene069105:CDS | 35.0% |
| ! | ACCACAATTATCCATTTTGC+AGG | - | chr5.4:22269522-22269541 | MS.gene069105:CDS | 35.0% |
| ! | ATTGGTGACTACTATAGTGA+AGG | - | chr5.4:22271958-22271977 | MS.gene069105:intron | 35.0% |
| ! | CAATTTAGAATGAAAGGAGC+CGG | + | chr5.4:22269494-22269513 | None:intergenic | 35.0% |
| ! | CACAATTATCCATTTTGCAG+GGG | - | chr5.4:22269524-22269543 | MS.gene069105:CDS | 35.0% |
| ! | CAGTATCATCTGAAGTAGTT+GGG | + | chr5.4:22272240-22272259 | None:intergenic | 35.0% |
| ! | CCACAATTATCCATTTTGCA+GGG | - | chr5.4:22269523-22269542 | MS.gene069105:CDS | 35.0% |
| ! | TCAGTATCATCTGAAGTAGT+TGG | + | chr5.4:22272241-22272260 | None:intergenic | 35.0% |
| ! | TGTCATTGTTGTTCATTCTG+AGG | - | chr5.4:22272138-22272157 | MS.gene069105:intron | 35.0% |
| ! | TTATTGACTGCAACTACAAC+TGG | + | chr5.4:22271695-22271714 | None:intergenic | 35.0% |
| !! | GTACATTAGCTGATTTTGCA+TGG | + | chr5.4:22271673-22271692 | None:intergenic | 35.0% |
| !! | TTGTTGAAGGTTTTGTGAAC+AGG | - | chr5.4:22273371-22273390 | MS.gene069105:CDS | 35.0% |
| !!! | TAGTTTTGTTTTACGTTGGC+AGG | - | chr5.4:22270351-22270370 | MS.gene069105:intron | 35.0% |
| AACAACAATGACATCGTCAC+CGG | + | chr5.4:22272131-22272150 | None:intergenic | 40.0% | |
| AAGCAAGACTTGACAAAGGA+CGG | - | chr5.4:22271930-22271949 | MS.gene069105:intron | 40.0% | |
| AAGTTGGCGTCAATGTTAAG+AGG | - | chr5.4:22271327-22271346 | MS.gene069105:CDS | 40.0% | |
| AATAGTCCTCAGGTATGTGA+TGG | - | chr5.4:22272352-22272371 | MS.gene069105:intron | 40.0% | |
| AATTTGAAGAGGACAGGCTT+AGG | - | chr5.4:22272197-22272216 | MS.gene069105:intron | 40.0% | |
| ACCTACCAAACCAAACCAAA+CGG | + | chr5.4:22273178-22273197 | None:intergenic | 40.0% | |
| ACCTTGTTCGTCTCTTAAGA+GGG | - | chr5.4:22273441-22273460 | MS.gene069105:intron | 40.0% | |
| AGTGAAAGGGAGCAAATCTA+AGG | - | chr5.4:22273318-22273337 | MS.gene069105:intron | 40.0% | |
| AGTTCAAAACAAGAAGGAGG+GGG | + | chr5.4:22271233-22271252 | None:intergenic | 40.0% | |
| ATTTGAAGAGGACAGGCTTA+GGG | - | chr5.4:22272198-22272217 | MS.gene069105:intron | 40.0% | |
| CAATCACTCATGTATAGGTG+TGG | - | chr5.4:22269846-22269865 | MS.gene069105:CDS | 40.0% | |
| CCCTGCAAAATGGATAATTG+TGG | + | chr5.4:22269526-22269545 | None:intergenic | 40.0% | |
| CCGTGTGATTTACCACTTAT+TGG | - | chr5.4:22273207-22273226 | MS.gene069105:intron | 40.0% | |
| CTGCTTCACTTGTAGCATAT+AGG | - | chr5.4:22270854-22270873 | MS.gene069105:CDS | 40.0% | |
| GACAACTTTGAATAGTCCTC+AGG | - | chr5.4:22272342-22272361 | MS.gene069105:intron | 40.0% | |
| GATGTGGATTCTGTGAAGAA+AGG | - | chr5.4:22273472-22273491 | MS.gene069105:intron | 40.0% | |
| GTGAAAGGGAGCAAATCTAA+GGG | - | chr5.4:22273319-22273338 | MS.gene069105:intron | 40.0% | |
| GTGAAGAAAGGAAATGAGTG+TGG | - | chr5.4:22273484-22273503 | MS.gene069105:intron | 40.0% | |
| GTTGAAGCAAGACTTGACAA+AGG | - | chr5.4:22271926-22271945 | MS.gene069105:intron | 40.0% | |
| TACTTCAGATGATACTGAGG+AGG | - | chr5.4:22272243-22272262 | MS.gene069105:intron | 40.0% | |
| TCACATACTTCTCCCTCTTT+GGG | + | chr5.4:22270436-22270455 | None:intergenic | 40.0% | |
| TCATTTCTGTTGCAGGAAGT+TGG | - | chr5.4:22271311-22271330 | MS.gene069105:CDS | 40.0% | |
| TCGGTGATAATACTCCTGAT+TGG | - | chr5.4:22270125-22270144 | MS.gene069105:intron | 40.0% | |
| TCTGTGAATGTTGTCCATGT+TGG | - | chr5.4:22272778-22272797 | MS.gene069105:intron | 40.0% | |
| TGATTGATGGAATCTGCATC+AGG | + | chr5.4:22269832-22269851 | None:intergenic | 40.0% | |
| TGGTTGCAGTGACTTTACAA+GGG | + | chr5.4:22270502-22270521 | None:intergenic | 40.0% | |
| TTATGCATCAGCAAGATGCA+TGG | - | chr5.4:22269718-22269737 | MS.gene069105:CDS | 40.0% | |
| TTGGTTGCAGTGACTTTACA+AGG | + | chr5.4:22270503-22270522 | None:intergenic | 40.0% | |
| TTTGCTGAAGCTTGGAAAGA+AGG | - | chr5.4:22269445-22269464 | MS.gene069105:CDS | 40.0% | |
| ! | AAAACTACAGCTTGCTTCAG+AGG | - | chr5.4:22271748-22271767 | MS.gene069105:intron | 40.0% |
| ! | AAACTACAGCTTGCTTCAGA+GGG | - | chr5.4:22271749-22271768 | MS.gene069105:intron | 40.0% |
| ! | AGGGAGAAGTATGTGAGAAA+AGG | - | chr5.4:22270440-22270459 | MS.gene069105:intron | 40.0% |
| ! | TTGTTGTTCATTCTGAGGAG+CGG | - | chr5.4:22272143-22272162 | MS.gene069105:intron | 40.0% |
| !! | CAACCAGCTATTTTCACATC+AGG | + | chr5.4:22273346-22273365 | None:intergenic | 40.0% |
| !! | CTAGAATGCTTAGTTCTGGT+AGG | - | chr5.4:22272167-22272186 | MS.gene069105:intron | 40.0% |
| !! | GATATCCGTTTGGTTTGGTT+TGG | - | chr5.4:22273170-22273189 | MS.gene069105:CDS | 40.0% |
| !! | GTACTGCTTTGTGAGTTGAT+AGG | - | chr5.4:22270093-22270112 | MS.gene069105:intron | 40.0% |
| !! | TATTTCTGAGCTTGCTGCAA+TGG | - | chr5.4:22270673-22270692 | MS.gene069105:intron | 40.0% |
| !!! | ACTTTTTCAGGATTTGCACC+TGG | + | chr5.4:22271728-22271747 | None:intergenic | 40.0% |
| AACCTACCTACCAAGACTCT+AGG | + | chr5.4:22271082-22271101 | None:intergenic | 45.0% | |
| AACGCTTTGCCAGTTCAACA+AGG | + | chr5.4:22270568-22270587 | None:intergenic | 45.0% | |
| AATGTTGTCCATGTTGGCGT+GGG | - | chr5.4:22272784-22272803 | MS.gene069105:intron | 45.0% | |
| ACAAAGAACAAGGACGTGGA+AGG | - | chr5.4:22272434-22272453 | MS.gene069105:CDS | 45.0% | |
| ACATACTTCTCCCTCTTTGG+GGG | + | chr5.4:22270434-22270453 | None:intergenic | 45.0% | |
| ACGCTTTGCCAGTTCAACAA+GGG | + | chr5.4:22270567-22270586 | None:intergenic | 45.0% | |
| ACTCCTTCAGGCTGATATGA+TGG | - | chr5.4:22271862-22271881 | MS.gene069105:intron | 45.0% | |
| AGAGGAAGCTTTACTCCTTC+AGG | - | chr5.4:22271850-22271869 | MS.gene069105:intron | 45.0% | |
| AGAGTCTTGGTAGGTAGGTT+TGG | - | chr5.4:22271082-22271101 | MS.gene069105:CDS | 45.0% | |
| AGAGTTTGAGCCTCTCAGTA+TGG | - | chr5.4:22270649-22270668 | MS.gene069105:intron | 45.0% | |
| AGCAACTCGTGCTAGTATCA+AGG | - | chr5.4:22272903-22272922 | MS.gene069105:intron | 45.0% | |
| AGCAAGACTTGACAAAGGAC+GGG | - | chr5.4:22271931-22271950 | MS.gene069105:intron | 45.0% | |
| AGCATCATTTGGCCTATGCA+TGG | - | chr5.4:22269981-22270000 | MS.gene069105:intron | 45.0% | |
| AGGGCTATTAAAGATGCAGC+AGG | - | chr5.4:22272037-22272056 | MS.gene069105:intron | 45.0% | |
| AGTAGGGGGACTAAAGAATG+TGG | - | chr5.4:22269877-22269896 | MS.gene069105:intron | 45.0% | |
| ATACTGAGGAGGTTCCAAAG+AGG | - | chr5.4:22272254-22272273 | MS.gene069105:intron | 45.0% | |
| ATCACATTTCTCGACACTCC+TGG | - | chr5.4:22271536-22271555 | MS.gene069105:CDS | 45.0% | |
| CAATGCCTGTGGAGATTGAA+GGG | - | chr5.4:22272086-22272105 | MS.gene069105:intron | 45.0% | |
| CACATACTTCTCCCTCTTTG+GGG | + | chr5.4:22270435-22270454 | None:intergenic | 45.0% | |
| CATCATGTAGGCATGTGGTA+GGG | - | chr5.4:22269660-22269679 | MS.gene069105:CDS | 45.0% | |
| CCTCCAGTTGTAACAGTGAT+GGG | - | chr5.4:22271386-22271405 | MS.gene069105:CDS | 45.0% | |
| CCTGATTGGTAGATTGGGTT+GGG | - | chr5.4:22270139-22270158 | MS.gene069105:intron | 45.0% | |
| CTAGTTGTTGCTGCAGATGA+CGG | - | chr5.4:22271617-22271636 | MS.gene069105:CDS | 45.0% | |
| CTATTAAAGATGCAGCAGGG+AGG | - | chr5.4:22272041-22272060 | MS.gene069105:intron | 45.0% | |
| CTCACATACTTCTCCCTCTT+TGG | + | chr5.4:22270437-22270456 | None:intergenic | 45.0% | |
| CTCGCAGTGGGGAAAAATAA+GGG | - | chr5.4:22272018-22272037 | MS.gene069105:intron | 45.0% | |
| GAAGGAGTAAAGCTTCCTCT+AGG | + | chr5.4:22271850-22271869 | None:intergenic | 45.0% | |
| GACACAGCTTCAAGTGTTTG+GGG | + | chr5.4:22271650-22271669 | None:intergenic | 45.0% | |
| GACCTTGTTCGTCTCTTAAG+AGG | - | chr5.4:22273440-22273459 | MS.gene069105:intron | 45.0% | |
| GAGTCTTGGTAGGTAGGTTT+GGG | - | chr5.4:22271083-22271102 | MS.gene069105:CDS | 45.0% | |
| GATCCATCATATCAGCCTGA+AGG | + | chr5.4:22271868-22271887 | None:intergenic | 45.0% | |
| GCTGCTTGGGTAAGAGATAT+AGG | + | chr5.4:22272886-22272905 | None:intergenic | 45.0% | |
| GCTGGTTGCAAAGTTGTTGA+AGG | - | chr5.4:22273358-22273377 | MS.gene069105:CDS | 45.0% | |
| GCTTGGGTAAGAGATATAGG+TGG | + | chr5.4:22272883-22272902 | None:intergenic | 45.0% | |
| GGACACAGCTTCAAGTGTTT+GGG | + | chr5.4:22271651-22271670 | None:intergenic | 45.0% | |
| GGACCTGATGTGAAAATAGC+TGG | - | chr5.4:22273340-22273359 | MS.gene069105:CDS | 45.0% | |
| GGGCTATTAAAGATGCAGCA+GGG | - | chr5.4:22272038-22272057 | MS.gene069105:intron | 45.0% | |
| GGTTCCAAAGAGGGTTGAAA+TGG | - | chr5.4:22272264-22272283 | MS.gene069105:intron | 45.0% | |
| GTGACTACTATAGTGAAGGC+AGG | - | chr5.4:22271962-22271981 | MS.gene069105:intron | 45.0% | |
| GTGACTTTACAAGGGACATG+TGG | + | chr5.4:22270494-22270513 | None:intergenic | 45.0% | |
| GTTCAAAACAAGAAGGAGGG+GGG | + | chr5.4:22271232-22271251 | None:intergenic | 45.0% | |
| GTTTCCGCGCTTAAAAAGAC+TGG | - | chr5.4:22271815-22271834 | MS.gene069105:intron | 45.0% | |
| TACTGAGGAGGTTCCAAAGA+GGG | - | chr5.4:22272255-22272274 | MS.gene069105:intron | 45.0% | |
| TAGTACTAGGCCTAGAGTCT+TGG | - | chr5.4:22271069-22271088 | MS.gene069105:CDS | 45.0% | |
| TATAGTGAAGGCAGGAACTC+TGG | - | chr5.4:22271970-22271989 | MS.gene069105:intron | 45.0% | |
| TCAACCACATATGCTTGAGC+AGG | + | chr5.4:22271911-22271930 | None:intergenic | 45.0% | |
| TCAAGAAGTGATGCAGCGTA+TGG | - | chr5.4:22270401-22270420 | MS.gene069105:intron | 45.0% | |
| TCCACGTCGGATTGAGAAAT+AGG | + | chr5.4:22272811-22272830 | None:intergenic | 45.0% | |
| TCCCTCTTAAGAGACGAACA+AGG | + | chr5.4:22273445-22273464 | None:intergenic | 45.0% | |
| TCCTCCAGTTGTAACAGTGA+TGG | - | chr5.4:22271385-22271404 | MS.gene069105:CDS | 45.0% | |
| TCCTGATTGGTAGATTGGGT+TGG | - | chr5.4:22270138-22270157 | MS.gene069105:intron | 45.0% | |
| TGACCCATCACTGTTACAAC+TGG | + | chr5.4:22271392-22271411 | None:intergenic | 45.0% | |
| TGGCTACGTCTTCCAATAAG+TGG | + | chr5.4:22273222-22273241 | None:intergenic | 45.0% | |
| TTCAAAACAAGAAGGAGGGG+GGG | + | chr5.4:22271231-22271250 | None:intergenic | 45.0% | |
| TTTGAAGAGGACAGGCTTAG+GGG | - | chr5.4:22272199-22272218 | MS.gene069105:intron | 45.0% | |
| ! | ACTGCCATTTCAACCCTCTT+TGG | + | chr5.4:22272271-22272290 | None:intergenic | 45.0% |
| ! | AGGTGTGGCTGGTTATAGTA+GGG | - | chr5.4:22269861-22269880 | MS.gene069105:intron | 45.0% |
| ! | GCTTCTAAGGAGTGGTGAAA+TGG | - | chr5.4:22273408-22273427 | MS.gene069105:CDS | 45.0% |
| ! | TAGGTGTGGCTGGTTATAGT+AGG | - | chr5.4:22269860-22269879 | MS.gene069105:intron | 45.0% |
| ! | TGTTGTTCATTCTGAGGAGC+GGG | - | chr5.4:22272144-22272163 | MS.gene069105:intron | 45.0% |
| ! | TTGACGCAAGGCATCAAGAA+GGG | + | chr5.4:22271435-22271454 | None:intergenic | 45.0% |
| ! | TTGATAATAGAGAAGGCCCC+AGG | - | chr5.4:22273244-22273263 | MS.gene069105:intron | 45.0% |
| ! | TTTGACGCAAGGCATCAAGA+AGG | + | chr5.4:22271436-22271455 | None:intergenic | 45.0% |
| !! | CAGTCCAGTCTTTTTAAGCG+CGG | + | chr5.4:22271822-22271841 | None:intergenic | 45.0% |
| !! | GCATCTCCCCATTTGTTGTA+AGG | - | chr5.4:22271005-22271024 | MS.gene069105:CDS | 45.0% |
| !! | GGCTGCTAGCAATGTTTTGA+TGG | - | chr5.4:22270920-22270939 | MS.gene069105:CDS | 45.0% |
| !! | GTGATGGGTCATGTTGATCA+CGG | - | chr5.4:22271401-22271420 | MS.gene069105:CDS | 45.0% |
| !! | TCCGTTTGGTTTGGTTTGGT+AGG | - | chr5.4:22273174-22273193 | MS.gene069105:CDS | 45.0% |
| !!! | TATTTTTATTAATAAAATTC+AGG | - | chr5.4:22273059-22273078 | MS.gene069105:intron | 5.0% |
| ACCACTCCTTAGAAGCCTCA+TGG | + | chr5.4:22273404-22273423 | None:intergenic | 50.0% | |
| ACCAGACTTGTGAGCTAGCA+TGG | + | chr5.4:22270382-22270401 | None:intergenic | 50.0% | |
| ACTAGGCCTAGAGTCTTGGT+AGG | - | chr5.4:22271073-22271092 | MS.gene069105:CDS | 50.0% | |
| ACTGTTACAACTGGAGGACG+TGG | + | chr5.4:22271383-22271402 | None:intergenic | 50.0% | |
| AGGCATGACCCTTGTTGAAC+TGG | - | chr5.4:22270556-22270575 | MS.gene069105:intron | 50.0% | |
| AGTAATGCCACCAGCTTCCT+TGG | + | chr5.4:22271471-22271490 | None:intergenic | 50.0% | |
| ATGTTGTCCATGTTGGCGTG+GGG | - | chr5.4:22272785-22272804 | MS.gene069105:intron | 50.0% | |
| CACGTCCTTGTTCTTTGTGC+GGG | + | chr5.4:22272432-22272451 | None:intergenic | 50.0% | |
| CACTCATGTATAGGTGTGGC+TGG | - | chr5.4:22269850-22269869 | MS.gene069105:intron | 50.0% | |
| CAGCAACCATGAGGCTTCTA+AGG | - | chr5.4:22273395-22273414 | MS.gene069105:CDS | 50.0% | |
| CATCTAGGTGCCTTTGTGGT+GGG | - | chr5.4:22271494-22271513 | MS.gene069105:CDS | 50.0% | |
| CCACGTCCTTGTTCTTTGTG+CGG | + | chr5.4:22272433-22272452 | None:intergenic | 50.0% | |
| CCCAACCCAATCTACCAATC+AGG | + | chr5.4:22270142-22270161 | None:intergenic | 50.0% | |
| CCCATCACTGTTACAACTGG+AGG | + | chr5.4:22271389-22271408 | None:intergenic | 50.0% | |
| CGCGCTTAAAAAGACTGGAC+TGG | - | chr5.4:22271820-22271839 | MS.gene069105:intron | 50.0% | |
| CTTTGGCTGCAGCATCATGT+AGG | - | chr5.4:22269648-22269667 | MS.gene069105:CDS | 50.0% | |
| GAATGTTGTCCATGTTGGCG+TGG | - | chr5.4:22272783-22272802 | MS.gene069105:intron | 50.0% | |
| GCAAGACTTGACAAAGGACG+GGG | - | chr5.4:22271932-22271951 | MS.gene069105:intron | 50.0% | |
| GCAATGCCTGTGGAGATTGA+AGG | - | chr5.4:22272085-22272104 | MS.gene069105:intron | 50.0% | |
| GCATCATGTAGGCATGTGGT+AGG | - | chr5.4:22269659-22269678 | MS.gene069105:CDS | 50.0% | |
| GCTCGCAGTGGGGAAAAATA+AGG | - | chr5.4:22272017-22272036 | MS.gene069105:intron | 50.0% | |
| GGGACACAGCTTCAAGTGTT+TGG | + | chr5.4:22271652-22271671 | None:intergenic | 50.0% | |
| GGTGGCATTACTCAGCATCT+AGG | - | chr5.4:22271479-22271498 | MS.gene069105:CDS | 50.0% | |
| GTCTCTTAAGAGGGAGAAGC+AGG | - | chr5.4:22273450-22273469 | MS.gene069105:intron | 50.0% | |
| TAAGAGGGAGAAGCAGGATG+TGG | - | chr5.4:22273456-22273475 | MS.gene069105:intron | 50.0% | |
| TACTAGCACGAGTTGCTGCT+TGG | + | chr5.4:22272900-22272919 | None:intergenic | 50.0% | |
| TAGCCCTACTCACCATGCAT+AGG | + | chr5.4:22269996-22270015 | None:intergenic | 50.0% | |
| TATGCATGGTGAGTAGGGCT+AGG | - | chr5.4:22269995-22270014 | MS.gene069105:intron | 50.0% | |
| TCAAAACAAGAAGGAGGGGG+GGG | + | chr5.4:22271230-22271249 | None:intergenic | 50.0% | |
| TCAGCATCTAGGTGCCTTTG+TGG | - | chr5.4:22271490-22271509 | MS.gene069105:CDS | 50.0% | |
| TCCATGCTAGCTCACAAGTC+TGG | - | chr5.4:22270378-22270397 | MS.gene069105:intron | 50.0% | |
| TGAACAGGACAGCAACCATG+AGG | - | chr5.4:22273386-22273405 | MS.gene069105:CDS | 50.0% | |
| TGATGACATGCCCACCACAA+AGG | + | chr5.4:22271507-22271526 | None:intergenic | 50.0% | |
| TGCAGCATCATGTAGGCATG+TGG | - | chr5.4:22269655-22269674 | MS.gene069105:CDS | 50.0% | |
| TGCTGTTAGAGGAGATGGGT+GGG | - | chr5.4:22271774-22271793 | MS.gene069105:intron | 50.0% | |
| TGGAGATTGAAGGGCTTCGA+GGG | - | chr5.4:22272095-22272114 | MS.gene069105:intron | 50.0% | |
| TGGCCTATGCATGGTGAGTA+GGG | - | chr5.4:22269990-22270009 | MS.gene069105:intron | 50.0% | |
| TGGTCCTGCTCAAGCATATG+TGG | - | chr5.4:22271904-22271923 | MS.gene069105:intron | 50.0% | |
| TGTGGACAGCATGTGGTTGT+AGG | - | chr5.4:22271995-22272014 | MS.gene069105:intron | 50.0% | |
| TTGGCCTATGCATGGTGAGT+AGG | - | chr5.4:22269989-22270008 | MS.gene069105:intron | 50.0% | |
| TTTAGTGCCATGCGAGCAAG+AGG | - | chr5.4:22271569-22271588 | MS.gene069105:CDS | 50.0% | |
| ! | AAGGCAGGAACTCTGGTTTG+TGG | - | chr5.4:22271977-22271996 | MS.gene069105:intron | 50.0% |
| ! | ACCATGAGGCTTCTAAGGAG+TGG | - | chr5.4:22273400-22273419 | MS.gene069105:CDS | 50.0% |
| ! | ACTAGCACGAGTTGCTGCTT+GGG | + | chr5.4:22272899-22272918 | None:intergenic | 50.0% |
| ! | ATGGTTTGAAGCCCCCAAAG+AGG | - | chr5.4:22270420-22270439 | MS.gene069105:intron | 50.0% |
| ! | CGGGCTAGAATGCTTAGTTC+TGG | - | chr5.4:22272163-22272182 | MS.gene069105:intron | 50.0% |
| ! | GACTGGACTGGATAACCTAG+AGG | - | chr5.4:22271832-22271851 | MS.gene069105:intron | 50.0% |
| ! | GCCTATTTCTCAATCCGACG+TGG | - | chr5.4:22272807-22272826 | MS.gene069105:intron | 50.0% |
| ! | GGTGTGGCTGGTTATAGTAG+GGG | - | chr5.4:22269862-22269881 | MS.gene069105:intron | 50.0% |
| ! | GTGTGGCTGGTTATAGTAGG+GGG | - | chr5.4:22269863-22269882 | MS.gene069105:intron | 50.0% |
| ! | GTTGAACTGGCAAAGCGTTC+TGG | - | chr5.4:22270569-22270588 | MS.gene069105:intron | 50.0% |
| ! | TCAATCTCCACAGGCATTGC+TGG | + | chr5.4:22272085-22272104 | None:intergenic | 50.0% |
| ! | TCTGGTTTGTGGACAGCATG+TGG | - | chr5.4:22271988-22272007 | MS.gene069105:intron | 50.0% |
| ! | TGGTTTGAAGCCCCCAAAGA+GGG | - | chr5.4:22270421-22270440 | MS.gene069105:intron | 50.0% |
| ! | TTGCTGTTAGAGGAGATGGG+TGG | - | chr5.4:22271773-22271792 | MS.gene069105:intron | 50.0% |
| !! | GGCTTGCTGTTAGAGGAGAT+GGG | - | chr5.4:22271770-22271789 | MS.gene069105:intron | 50.0% |
| !! | TTCAGAGGGCTTGCTGTTAG+AGG | - | chr5.4:22271763-22271782 | MS.gene069105:intron | 50.0% |
| !! | TTTGTGGTGGGCATGTCATC+AGG | - | chr5.4:22271506-22271525 | MS.gene069105:CDS | 50.0% |
| AAAACAAGAAGGAGGGGGGG+GGG | + | chr5.4:22271228-22271247 | None:intergenic | 55.0% | |
| AAATAGGCCCCACGCCAACA+TGG | + | chr5.4:22272795-22272814 | None:intergenic | 55.0% | |
| AGCAACTCCAGCAATGCCTG+TGG | - | chr5.4:22272075-22272094 | MS.gene069105:intron | 55.0% | |
| ATGACATCGTCACCGGCCAT+TGG | + | chr5.4:22272124-22272143 | None:intergenic | 55.0% | |
| ATGGCGGCTTTGCTGAAGCT+TGG | - | chr5.4:22269437-22269456 | MS.gene069105:CDS | 55.0% | |
| ATGTGGTTGTAGGCTCGCAG+TGG | - | chr5.4:22272005-22272024 | MS.gene069105:intron | 55.0% | |
| CAAAACAAGAAGGAGGGGGG+GGG | + | chr5.4:22271229-22271248 | None:intergenic | 55.0% | |
| CCGCACAAAGAACAAGGACG+TGG | - | chr5.4:22272430-22272449 | MS.gene069105:CDS | 55.0% | |
| CGAAGCCCTTCAATCTCCAC+AGG | + | chr5.4:22272094-22272113 | None:intergenic | 55.0% | |
| GCACTAAATGCAGCGTGACC+AGG | + | chr5.4:22271557-22271576 | None:intergenic | 55.0% | |
| GCATCAGCAAGATGCATGGC+TGG | - | chr5.4:22269722-22269741 | MS.gene069105:CDS | 55.0% | |
| GCATCTAGGTGCCTTTGTGG+TGG | - | chr5.4:22271493-22271512 | MS.gene069105:CDS | 55.0% | |
| GCTGTTAGAGGAGATGGGTG+GGG | - | chr5.4:22271775-22271794 | MS.gene069105:intron | 55.0% | |
| GCTTGCGGTGCATGCATAGT+TGG | - | chr5.4:22272841-22272860 | MS.gene069105:intron | 55.0% | |
| GGAGATGGGTGGGGATATTC+AGG | - | chr5.4:22271784-22271803 | MS.gene069105:intron | 55.0% | |
| GGCCTAGAGTCTTGGTAGGT+AGG | - | chr5.4:22271077-22271096 | MS.gene069105:CDS | 55.0% | |
| GTGGAGATTGAAGGGCTTCG+AGG | - | chr5.4:22272094-22272113 | MS.gene069105:intron | 55.0% | |
| TCAAACGTCAGTGGCAGCCA+AGG | - | chr5.4:22271451-22271470 | MS.gene069105:CDS | 55.0% | |
| TGACAAAGGACGGGGTCCAT+TGG | - | chr5.4:22271940-22271959 | MS.gene069105:intron | 55.0% | |
| TGATGCTGCAGCCAAAGCTC+TGG | + | chr5.4:22269645-22269664 | None:intergenic | 55.0% | |
| TGCCACTGACGTTTGACGCA+AGG | + | chr5.4:22271447-22271466 | None:intergenic | 55.0% | |
| TGCCTTGCGTCAAACGTCAG+TGG | - | chr5.4:22271442-22271461 | MS.gene069105:CDS | 55.0% | |
| TGTGGTTGTAGGCTCGCAGT+GGG | - | chr5.4:22272006-22272025 | MS.gene069105:intron | 55.0% | |
| ! | ACATGTGGAGCGTCAACAGG+AGG | + | chr5.4:22270479-22270498 | None:intergenic | 55.0% |
| !! | GGGCTTGCTGTTAGAGGAGA+TGG | - | chr5.4:22271769-22271788 | MS.gene069105:intron | 55.0% |
| !!! | GGGATGGGGGCACTTTTAAG+AGG | - | chr5.4:22270059-22270078 | MS.gene069105:intron | 55.0% |
| AAACAAGAAGGAGGGGGGGG+GGG | + | chr5.4:22271227-22271246 | None:intergenic | 60.0% | |
| ACCTGAGTCTCGGGTGTACC+TGG | + | chr5.4:22273265-22273284 | None:intergenic | 60.0% | |
| AGCCTGTGCTAGGTCCACGT+CGG | + | chr5.4:22272824-22272843 | None:intergenic | 60.0% | |
| AGGTACACCCGAGACTCAGG+TGG | - | chr5.4:22273264-22273283 | MS.gene069105:intron | 60.0% | |
| ATCCGACGTGGACCTAGCAC+AGG | - | chr5.4:22272819-22272838 | MS.gene069105:intron | 60.0% | |
| ATGCACCGCAAGCCTGTGCT+AGG | + | chr5.4:22272834-22272853 | None:intergenic | 60.0% | |
| CCTGAGTCTCGGGTGTACCT+GGG | + | chr5.4:22273264-22273283 | None:intergenic | 60.0% | |
| CTGAGTCTCGGGTGTACCTG+GGG | + | chr5.4:22273263-22273282 | None:intergenic | 60.0% | |
| GCTCGCCCGCACAAAGAACA+AGG | - | chr5.4:22272424-22272443 | MS.gene069105:CDS | 60.0% | |
| GTGGACCTAGCACAGGCTTG+CGG | - | chr5.4:22272826-22272845 | MS.gene069105:intron | 60.0% | |
| GTGGTTGTAGGCTCGCAGTG+GGG | - | chr5.4:22272007-22272026 | MS.gene069105:intron | 60.0% | |
| TCAGTGGCAGCCAAGGAAGC+TGG | - | chr5.4:22271458-22271477 | MS.gene069105:CDS | 60.0% | |
| TGCTGCACCTCTTGCTCGCA+TGG | + | chr5.4:22271579-22271598 | None:intergenic | 60.0% | |
| TTGCCCAGCCACCTGAGTCT+CGG | + | chr5.4:22273275-22273294 | None:intergenic | 60.0% | |
| ! | GGGACATGTGGAGCGTCAAC+AGG | + | chr5.4:22270482-22270501 | None:intergenic | 60.0% |
| ACACCCGAGACTCAGGTGGC+TGG | - | chr5.4:22273268-22273287 | MS.gene069105:intron | 65.0% | |
| AGGGCTTCGAGGGCTGCCAA+TGG | - | chr5.4:22272105-22272124 | MS.gene069105:intron | 65.0% | |
| CACCCGAGACTCAGGTGGCT+GGG | - | chr5.4:22273269-22273288 | MS.gene069105:intron | 65.0% | |
| CCCAGGTACACCCGAGACTC+AGG | - | chr5.4:22273261-22273280 | MS.gene069105:intron | 65.0% | |
| CTTCGAGGGCTGCCAATGGC+CGG | - | chr5.4:22272109-22272128 | MS.gene069105:intron | 65.0% | |
| GGGGGGGGATTAGAGAGTGG+CGG | + | chr5.4:22271212-22271231 | None:intergenic | 65.0% | |
| GTGGCAGCCAAGGAAGCTGG+TGG | - | chr5.4:22271461-22271480 | MS.gene069105:CDS | 65.0% | |
| TGCCCAGCCACCTGAGTCTC+GGG | + | chr5.4:22273274-22273293 | None:intergenic | 65.0% | |
| ! | GTGGAGCGTCAACAGGAGGC+TGG | + | chr5.4:22270475-22270494 | None:intergenic | 65.0% |
| GGGGGGGGGGGATTAGAGAG+TGG | + | chr5.4:22271215-22271234 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 22269437 | 22273627 | 22269437 | ID=MS.gene069105 |
| chr5.4 | mRNA | 22269437 | 22273627 | 22269437 | ID=MS.gene069105.t1;Parent=MS.gene069105 |
| chr5.4 | exon | 22273598 | 22273627 | 22273598 | ID=MS.gene069105.t1.exon1;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22273598 | 22273627 | 22273598 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22273321 | 22273441 | 22273321 | ID=MS.gene069105.t1.exon2;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22273321 | 22273441 | 22273321 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22273159 | 22273225 | 22273159 | ID=MS.gene069105.t1.exon3;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22273159 | 22273225 | 22273159 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22272370 | 22272691 | 22272370 | ID=MS.gene069105.t1.exon4;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22272370 | 22272691 | 22272370 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22270701 | 22271738 | 22270701 | ID=MS.gene069105.t1.exon5;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22270701 | 22271738 | 22270701 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22270140 | 22270289 | 22270140 | ID=MS.gene069105.t1.exon6;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22270140 | 22270289 | 22270140 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| chr5.4 | exon | 22269437 | 22269868 | 22269437 | ID=MS.gene069105.t1.exon7;Parent=MS.gene069105.t1 |
| chr5.4 | CDS | 22269437 | 22269868 | 22269437 | ID=cds.MS.gene069105.t1;Parent=MS.gene069105.t1 |
| Gene Sequence |
| Protein sequence |
