AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069127


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069127.t1 MTR_5g031840 87.124 466 58 2 1 464 1 466 0.0 856
MS.gene069127.t1 MTR_5g031860 80.860 465 84 2 4 464 11 474 0.0 771
MS.gene069127.t1 MTR_5g031830 78.755 466 95 1 3 464 10 475 0.0 767
MS.gene069127.t1 MTR_5g464810 39.709 481 249 13 5 459 12 477 8.95e-100 307
MS.gene069127.t1 MTR_5g064240 39.709 481 249 13 5 459 12 477 8.95e-100 307
MS.gene069127.t1 MTR_5g464760 39.916 476 259 13 4 459 11 479 1.10e-98 305
MS.gene069127.t1 MTR_0036s0220 38.477 486 250 15 4 459 11 477 1.73e-96 299
MS.gene069127.t1 MTR_6g014187 33.958 480 284 10 4 459 9 479 1.47e-93 291
MS.gene069127.t1 MTR_6g013960 34.105 475 290 9 4 459 9 479 6.78e-93 290
MS.gene069127.t1 MTR_2g008210 36.653 472 278 10 4 459 10 476 9.36e-93 289
MS.gene069127.t1 MTR_4g094220 35.417 480 273 10 4 456 6 475 3.17e-92 288
MS.gene069127.t1 MTR_6g014040 35.430 477 282 11 4 459 9 480 2.14e-91 286
MS.gene069127.t1 MTR_6g013900 36.287 474 276 11 4 457 9 476 3.53e-91 285
MS.gene069127.t1 MTR_6g014220 35.307 473 285 10 4 459 9 477 5.20e-91 285
MS.gene069127.t1 MTR_3g479520 34.801 477 286 10 2 459 12 482 2.51e-90 283
MS.gene069127.t1 MTR_6g014270 33.753 477 291 9 4 459 6 478 3.05e-90 283
MS.gene069127.t1 MTR_7g011470 36.017 472 267 8 4 459 9 461 1.10e-89 281
MS.gene069127.t1 MTR_7g011470 36.229 472 270 9 4 459 9 465 1.47e-89 281
MS.gene069127.t1 MTR_6g013920 36.175 481 267 11 4 457 9 476 2.31e-89 281
MS.gene069127.t1 MTR_3g479470 36.515 482 266 13 2 457 10 477 5.28e-89 280
MS.gene069127.t1 MTR_6g013450 33.264 481 287 11 4 459 9 480 2.32e-88 278
MS.gene069127.t1 MTR_6g013440 33.891 478 287 12 4 459 10 480 3.75e-88 278
MS.gene069127.t1 MTR_6g014200 35.084 476 284 10 4 459 6 476 5.14e-88 277
MS.gene069127.t1 MTR_5g058320 33.120 468 289 9 4 459 9 464 1.11e-87 276
MS.gene069127.t1 MTR_3g479490 34.599 474 279 11 5 456 6 470 1.33e-87 276
MS.gene069127.t1 MTR_3g079480 33.817 482 280 10 2 457 18 486 7.75e-87 275
MS.gene069127.t1 MTR_6g014250 33.263 472 294 10 5 459 10 477 2.64e-86 273
MS.gene069127.t1 MTR_6g014150 34.025 482 281 10 4 459 6 476 9.99e-86 271
MS.gene069127.t1 MTR_6g014020 32.421 475 298 9 4 459 9 479 1.03e-85 271
MS.gene069127.t1 MTR_8g059425 32.777 479 289 12 4 459 9 477 2.63e-85 270
MS.gene069127.t1 MTR_3g008010 33.121 471 294 10 4 457 9 475 4.78e-85 270
MS.gene069127.t1 MTR_0288s0020 32.842 475 277 9 4 459 9 460 7.21e-85 268
MS.gene069127.t1 MTR_6g014290 32.909 471 295 10 4 457 9 475 8.99e-85 269
MS.gene069127.t1 MTR_6g014050 34.874 476 285 11 4 459 10 480 1.02e-84 269
MS.gene069127.t1 MTR_6g011340 33.895 475 291 9 4 459 9 479 2.71e-84 268
MS.gene069127.t1 MTR_6g014310 33.686 472 290 11 4 456 10 477 3.04e-83 265
MS.gene069127.t1 MTR_6g013990 34.440 482 277 13 4 459 9 477 1.99e-81 260
MS.gene069127.t1 MTR_6g014300 32.983 476 278 13 4 459 11 465 2.39e-79 254
MS.gene069127.t1 MTR_3g069710 34.110 472 264 14 6 461 13 453 2.29e-77 249
MS.gene069127.t1 MTR_6g014170 33.615 473 277 11 4 459 9 461 1.27e-76 247
MS.gene069127.t1 MTR_4g064987 34.947 475 258 16 6 461 9 451 4.43e-76 245
MS.gene069127.t1 MTR_3g069690 34.183 471 269 12 5 461 8 451 8.58e-76 244
MS.gene069127.t1 MTR_6g014240 32.976 467 274 13 5 459 7 446 2.86e-74 241
MS.gene069127.t1 MTR_4g064987 34.737 475 253 17 6 461 9 445 6.34e-74 239
MS.gene069127.t1 MTR_6g014190 38.516 283 171 3 180 459 4 286 7.08e-69 221
MS.gene069127.t1 MTR_7g013220 31.340 485 274 13 1 460 1 451 2.62e-64 214
MS.gene069127.t1 MTR_0891s0010 37.324 284 172 3 180 457 4 287 1.01e-63 208
MS.gene069127.t1 MTR_8g088560 32.770 473 281 16 5 462 10 460 4.95e-63 211
MS.gene069127.t1 MTR_7g013200 30.867 473 277 12 1 458 1 438 7.71e-63 210
MS.gene069127.t1 MTR_5g035560 31.590 478 275 16 5 463 11 455 9.92e-63 212
MS.gene069127.t1 MTR_5g035580 31.315 479 275 16 5 463 13 457 2.46e-62 209
MS.gene069127.t1 MTR_7g013240 31.656 477 261 14 4 458 5 438 2.57e-62 209
MS.gene069127.t1 MTR_0477s0010 32.653 343 189 5 125 459 8 316 1.81e-61 203
MS.gene069127.t1 MTR_7g080935 30.417 480 281 15 5 464 11 457 3.13e-61 207
MS.gene069127.t1 MTR_3g479610 36.014 286 177 3 180 459 27 312 4.06e-61 202
MS.gene069127.t1 MTR_7g080940 30.361 471 284 16 5 461 11 451 9.15e-61 205
MS.gene069127.t1 MTR_7g080950 30.737 475 270 17 5 456 6 444 1.36e-60 205
MS.gene069127.t1 MTR_7g013260 30.342 468 280 12 4 458 5 439 1.87e-59 201
MS.gene069127.t1 MTR_6g038240 30.917 469 285 15 2 456 8 451 3.59e-59 201
MS.gene069127.t1 MTR_3g084520 32.150 479 289 12 5 459 6 472 6.76e-58 198
MS.gene069127.t1 MTR_6g014186 27.883 477 283 10 2 459 4 438 1.55e-57 196
MS.gene069127.t1 MTR_1g107380 30.833 480 295 14 5 463 13 476 2.83e-57 197
MS.gene069127.t1 MTR_8g043470 30.971 381 220 7 86 459 33 377 1.20e-56 192
MS.gene069127.t1 MTR_6g038230 30.720 472 276 18 5 456 11 451 1.48e-56 194
MS.gene069127.t1 MTR_6g038300 30.490 469 286 16 3 456 9 452 1.58e-56 194
MS.gene069127.t1 MTR_1g107315 30.271 479 296 16 5 461 8 470 7.40e-56 193
MS.gene069127.t1 MTR_8g066610 30.498 482 303 15 5 463 9 481 8.79e-55 190
MS.gene069127.t1 MTR_1g107350 30.247 486 292 18 2 460 4 469 2.38e-54 189
MS.gene069127.t1 MTR_1g032490 28.986 483 295 14 5 460 10 471 9.00e-54 187
MS.gene069127.t1 MTR_7g080900 29.645 479 279 18 5 461 12 454 1.87e-53 186
MS.gene069127.t1 MTR_8g007585 42.786 201 113 2 261 459 191 391 9.77e-53 182
MS.gene069127.t1 MTR_7g102560 32.470 502 265 21 5 459 9 483 1.11e-52 184
MS.gene069127.t1 MTR_5g016480 27.883 477 308 13 2 456 5 467 7.59e-52 182
MS.gene069127.t1 MTR_3g009510 29.150 494 293 15 1 457 1 474 3.32e-51 181
MS.gene069127.t1 MTR_6g014160 33.333 285 153 6 108 386 104 357 9.53e-51 177
MS.gene069127.t1 MTR_8g083290 28.008 482 295 14 4 456 2 460 1.46e-50 178
MS.gene069127.t1 MTR_8g064870 28.866 485 295 18 6 461 12 475 2.64e-50 178
MS.gene069127.t1 MTR_6g038200 28.661 478 278 16 5 456 11 451 7.10e-50 176
MS.gene069127.t1 MTR_4g485630 29.800 500 279 20 5 463 9 477 1.17e-49 176
MS.gene069127.t1 MTR_4g094920 29.025 472 292 16 6 456 27 476 1.17e-49 177
MS.gene069127.t1 MTR_3g084530 31.405 484 286 13 5 459 6 472 1.99e-49 176
MS.gene069127.t1 MTR_6g033625 28.931 477 295 13 6 457 5 462 6.04e-49 174
MS.gene069127.t1 MTR_3g084540 30.849 483 291 12 5 459 6 473 9.95e-49 174
MS.gene069127.t1 MTR_7g117170 29.918 488 276 19 4 455 14 471 1.97e-48 173
MS.gene069127.t1 MTR_1g107365 29.046 482 289 18 2 460 41 492 2.14e-48 173
MS.gene069127.t1 MTR_7g013180 27.426 474 292 13 1 454 1 442 2.24e-48 172
MS.gene069127.t1 MTR_5g070090 31.120 482 279 20 7 463 12 465 2.72e-48 172
MS.gene069127.t1 MTR_7g102450 30.515 485 291 17 1 459 7 471 3.43e-48 172
MS.gene069127.t1 MTR_3g049970 28.364 483 307 14 2 461 5 471 9.04e-48 171
MS.gene069127.t1 MTR_1g107375 28.151 476 293 17 5 460 8 454 1.31e-47 170
MS.gene069127.t1 MTR_6g038220 27.859 481 281 21 3 456 9 450 1.41e-47 170
MS.gene069127.t1 MTR_6g013680 30.641 359 189 9 108 459 69 374 1.58e-47 168
MS.gene069127.t1 MTR_4g095008 28.008 482 286 17 5 456 11 461 4.45e-47 171
MS.gene069127.t1 MTR_8g027885 29.916 478 269 20 4 448 17 461 4.49e-47 169
MS.gene069127.t1 MTR_1g107360 29.622 476 298 16 2 459 5 461 5.64e-47 169
MS.gene069127.t1 MTR_6g033725 28.992 476 289 18 6 455 5 457 1.28e-46 168
MS.gene069127.t1 MTR_8g083280 30.372 484 277 17 6 459 8 461 2.54e-46 167
MS.gene069127.t1 MTR_7g117405 29.268 492 294 16 2 459 9 480 5.18e-46 166
MS.gene069127.t1 MTR_5g090700 28.150 508 284 20 1 459 1 476 1.33e-45 165
MS.gene069127.t1 MTR_8g064880 28.855 454 277 18 2 426 5 441 1.38e-45 166
MS.gene069127.t1 MTR_1g107285 26.987 478 304 13 6 460 9 464 1.56e-45 165
MS.gene069127.t1 MTR_8g009050 32.609 368 197 13 117 455 117 462 2.74e-45 164
MS.gene069127.t1 MTR_1g062380 28.916 498 291 20 5 459 16 493 5.67e-45 164
MS.gene069127.t1 MTR_5g090670 28.261 506 286 18 1 459 1 476 1.28e-44 162
MS.gene069127.t1 MTR_8g027870 29.350 477 273 18 4 448 17 461 1.88e-44 162
MS.gene069127.t1 MTR_6g033615 27.637 474 291 14 6 457 5 448 2.65e-44 161
MS.gene069127.t1 MTR_6g033660 27.536 483 289 16 6 455 5 459 3.96e-44 161
MS.gene069127.t1 MTR_6g033675 28.482 481 288 17 6 455 5 460 7.50e-44 160
MS.gene069127.t1 MTR_8g009063 28.106 491 285 20 2 455 10 469 9.09e-44 160
MS.gene069127.t1 MTR_5g072860 27.426 474 299 15 5 459 18 465 1.12e-43 160
MS.gene069127.t1 MTR_6g488280 29.436 479 284 17 6 455 7 460 1.57e-43 159
MS.gene069127.t1 MTR_0428s0010 29.436 479 284 17 6 455 7 460 1.57e-43 159
MS.gene069127.t1 MTR_7g071040 26.735 490 312 15 5 461 17 492 1.72e-43 160
MS.gene069127.t1 MTR_8g008990 27.536 483 300 16 2 455 3 464 2.14e-43 159
MS.gene069127.t1 MTR_8g006710 35.926 270 143 9 212 461 208 467 4.50e-43 158
MS.gene069127.t1 MTR_8g006730 27.664 488 285 18 5 455 6 462 5.12e-43 158
MS.gene069127.t1 MTR_8g090095 29.461 482 276 18 10 459 30 479 7.09e-43 158
MS.gene069127.t1 MTR_7g102490 27.846 492 304 18 5 459 9 486 7.26e-43 158
MS.gene069127.t1 MTR_5g045970 29.091 495 303 18 5 464 16 497 8.30e-43 158
MS.gene069127.t1 MTR_5g090630 27.711 498 288 18 1 459 1 465 9.31e-43 157
MS.gene069127.t1 MTR_4g485620 32.984 382 224 14 99 461 88 456 1.53e-42 157
MS.gene069127.t1 MTR_8g009055 31.519 349 199 11 130 455 131 462 1.69e-42 157
MS.gene069127.t1 MTR_2g059240 27.801 482 297 13 4 459 12 468 4.43e-42 155
MS.gene069127.t1 MTR_6g014185 34.400 250 131 6 211 457 123 342 4.69e-42 153
MS.gene069127.t1 MTR_7g070800 27.049 488 309 15 5 461 6 477 4.76e-42 156
MS.gene069127.t1 MTR_7g070610 27.273 495 303 19 5 461 13 488 5.42e-42 156
MS.gene069127.t1 MTR_7g102550 27.677 495 296 14 5 457 9 483 8.99e-42 155
MS.gene069127.t1 MTR_5g098930 27.833 503 283 18 1 459 1 467 1.03e-41 154
MS.gene069127.t1 MTR_6g023665 27.801 482 288 18 6 455 14 467 1.17e-41 154
MS.gene069127.t1 MTR_5g072810 28.395 486 277 17 5 461 12 455 1.18e-41 154
MS.gene069127.t1 MTR_3g031450 28.482 481 271 17 5 459 18 451 1.21e-41 154
MS.gene069127.t1 MTR_7g055710 27.835 485 302 16 5 456 11 480 1.35e-41 155
MS.gene069127.t1 MTR_4g117960 28.926 484 293 18 10 460 16 481 1.64e-41 154
MS.gene069127.t1 MTR_7g070660 26.978 493 302 18 5 461 11 481 2.63e-41 154
MS.gene069127.t1 MTR_7g102520 28.858 499 295 18 5 462 12 491 2.84e-41 154
MS.gene069127.t1 MTR_8g465670 29.184 490 278 24 6 456 8 467 3.03e-41 153
MS.gene069127.t1 MTR_4g108250 27.000 500 301 18 5 461 11 489 3.11e-41 154
MS.gene069127.t1 MTR_4g024020 26.978 493 308 16 5 459 9 487 3.25e-41 154
MS.gene069127.t1 MTR_6g035185 27.799 518 276 20 1 460 6 483 3.92e-41 153
MS.gene069127.t1 MTR_2g035040 30.105 382 218 12 110 460 24 387 6.76e-41 150
MS.gene069127.t1 MTR_8g077590 32.292 384 207 17 108 463 112 470 7.12e-41 152
MS.gene069127.t1 MTR_0536s0020 25.979 485 306 15 6 460 19 480 7.52e-41 152
MS.gene069127.t1 MTR_5g090580 27.756 508 284 19 1 459 1 474 7.74e-41 152
MS.gene069127.t1 MTR_4g031800 34.432 273 152 7 213 461 205 474 1.05e-40 152
MS.gene069127.t1 MTR_1g019510 28.337 487 286 19 2 455 3 459 1.59e-40 151
MS.gene069127.t1 MTR_7g070740 26.721 494 306 18 5 461 11 485 1.82e-40 152
MS.gene069127.t1 MTR_8g006260 31.854 383 203 10 98 448 102 458 1.96e-40 151
MS.gene069127.t1 MTR_5g090600 28.685 502 266 23 1 459 1 453 1.96e-40 151
MS.gene069127.t1 MTR_5g045960 27.642 492 304 18 5 459 9 485 5.53e-40 150
MS.gene069127.t1 MTR_0009s0240 27.984 486 287 19 5 460 7 459 7.66e-40 149
MS.gene069127.t1 MTR_2g034990 27.959 490 291 17 10 460 16 482 9.85e-40 149
MS.gene069127.t1 MTR_5g090660 26.562 512 283 19 1 459 1 472 1.05e-39 150
MS.gene069127.t1 MTR_7g102460 27.525 505 287 19 5 459 9 484 1.06e-39 149
MS.gene069127.t1 MTR_7g070930 26.369 493 310 17 5 461 14 489 1.06e-39 149
MS.gene069127.t1 MTR_4g128690 29.396 364 226 12 105 461 115 454 1.18e-39 149
MS.gene069127.t1 MTR_5g090610 27.935 494 289 16 1 460 1 461 1.31e-39 149
MS.gene069127.t1 MTR_7g070810 26.000 500 296 16 5 461 9 477 1.66e-39 149
MS.gene069127.t1 MTR_7g070940 27.216 485 306 16 5 461 9 474 1.78e-39 149
MS.gene069127.t1 MTR_2g046820 32.673 303 180 6 173 457 164 460 2.02e-39 148
MS.gene069127.t1 MTR_1g029540 27.215 474 288 14 10 459 19 459 2.02e-39 148
MS.gene069127.t1 MTR_6g035295 28.513 491 299 17 6 461 13 486 2.24e-39 149
MS.gene069127.t1 MTR_8g012650 34.191 272 144 8 203 448 198 460 2.25e-39 148
MS.gene069127.t1 MTR_8g009067 27.708 480 301 16 2 456 3 461 2.45e-39 148
MS.gene069127.t1 MTR_5g098960 26.303 422 293 8 1 419 3 409 2.59e-39 147
MS.gene069127.t1 MTR_6g005600 25.737 509 290 19 1 461 1 469 2.64e-39 148
MS.gene069127.t1 MTR_8g012635 29.487 390 224 14 97 452 92 464 2.89e-39 148
MS.gene069127.t1 MTR_2g046750 33.003 303 175 7 173 457 171 463 3.13e-39 147
MS.gene069127.t1 MTR_7g070860 26.186 485 303 14 5 461 7 464 3.33e-39 148
MS.gene069127.t1 MTR_5g087620 29.447 506 286 22 4 459 9 493 3.74e-39 148
MS.gene069127.t1 MTR_0184s0030 29.494 356 208 9 117 448 120 456 5.49e-39 147
MS.gene069127.t1 MTR_5g070040 29.897 485 284 21 1 456 6 463 7.95e-39 147
MS.gene069127.t1 MTR_4g117980 27.565 497 295 17 10 464 16 489 8.22e-39 147
MS.gene069127.t1 MTR_8g009067 29.692 357 214 11 121 456 3 343 1.09e-38 144
MS.gene069127.t1 MTR_7g070910 27.126 494 305 19 5 461 11 486 1.98e-38 146
MS.gene069127.t1 MTR_5g075440 25.793 473 300 15 5 456 10 452 2.60e-38 145
MS.gene069127.t1 MTR_5g067170 28.657 499 293 15 1 460 6 480 2.62e-38 145
MS.gene069127.t1 MTR_8g009073 29.224 438 260 17 2 415 3 414 2.78e-38 145
MS.gene069127.t1 MTR_8g012630 39.320 206 103 6 269 452 203 408 3.34e-38 144
MS.gene069127.t1 MTR_3g031400 26.915 483 282 16 5 463 18 453 3.66e-38 145
MS.gene069127.t1 MTR_5g072830 27.406 478 289 15 5 461 10 450 4.18e-38 144
MS.gene069127.t1 MTR_4g485640 32.616 279 163 8 200 457 390 664 4.84e-38 147
MS.gene069127.t1 MTR_8g006220 27.944 501 279 23 6 456 7 475 5.47e-38 144
MS.gene069127.t1 MTR_8g008970 28.719 484 289 18 2 455 3 460 5.49e-38 147
MS.gene069127.t1 MTR_8g008970 34.630 257 139 11 212 455 544 784 5.39e-32 130
MS.gene069127.t1 MTR_4g128720 27.754 472 305 18 1 461 11 457 5.61e-38 144
MS.gene069127.t1 MTR_6g035265 27.383 493 295 18 1 457 6 471 5.64e-38 144
MS.gene069127.t1 MTR_4g117950 26.899 487 305 14 1 460 1 463 7.12e-38 144
MS.gene069127.t1 MTR_2g040530 29.581 382 232 12 96 457 98 462 7.64e-38 144
MS.gene069127.t1 MTR_4g118000 27.403 489 279 15 10 460 17 467 8.31e-38 144
MS.gene069127.t1 MTR_8g012730 38.835 206 104 6 264 447 91 296 8.62e-38 140
MS.gene069127.t1 MTR_5g016660 26.789 489 309 17 7 461 12 485 1.08e-37 144
MS.gene069127.t1 MTR_2g035020 27.054 499 296 15 6 462 12 484 1.91e-37 143
MS.gene069127.t1 MTR_8g006270 31.599 269 148 6 213 456 203 460 3.03e-37 142
MS.gene069127.t1 MTR_8g009073 39.269 219 107 9 213 415 77 285 3.74e-37 139
MS.gene069127.t1 MTR_5g004940 34.783 207 118 3 261 463 188 381 1.13e-36 139
MS.gene069127.t1 MTR_8g012745 29.041 365 218 13 108 448 110 457 1.20e-36 140
MS.gene069127.t1 MTR_0078s0010 26.556 482 298 15 5 455 6 462 1.26e-36 140
MS.gene069127.t1 MTR_7g047030 26.598 485 300 17 2 455 3 462 1.46e-36 140
MS.gene069127.t1 MTR_7g047270 26.598 485 300 17 2 455 3 462 1.46e-36 140
MS.gene069127.t1 MTR_4g117890 25.562 489 303 14 6 460 14 475 1.48e-36 140
MS.gene069127.t1 MTR_4g082820 35.926 270 139 10 211 457 203 461 1.64e-36 140
MS.gene069127.t1 MTR_8g071070 25.934 482 312 13 5 460 7 469 2.18e-36 140
MS.gene069127.t1 MTR_7g070780 38.208 212 110 7 270 461 275 485 2.23e-36 140
MS.gene069127.t1 MTR_2086s0010 36.842 171 105 2 292 459 1 171 2.50e-36 132
MS.gene069127.t1 MTR_1996s0010 36.842 171 105 2 292 459 1 171 2.50e-36 132
MS.gene069127.t1 MTR_5g072820 26.667 480 290 15 5 461 10 450 3.33e-36 139
MS.gene069127.t1 MTR_5g040030 31.835 267 161 7 216 461 223 489 3.93e-36 140
MS.gene069127.t1 MTR_4g008630 35.496 262 143 7 216 459 209 462 5.74e-36 139
MS.gene069127.t1 MTR_5g090620 25.299 502 305 18 1 459 1 475 6.48e-36 139
MS.gene069127.t1 MTR_5g072840 27.731 476 290 14 5 461 10 450 8.58e-36 138
MS.gene069127.t1 MTR_0184s0040 26.195 481 306 14 2 455 18 476 9.21e-36 138
MS.gene069127.t1 MTR_0078s0190 26.195 481 306 14 2 455 18 476 9.21e-36 138
MS.gene069127.t1 MTR_7g046490 29.396 364 201 14 123 456 123 460 1.00e-35 138
MS.gene069127.t1 MTR_0536s0010 27.510 498 287 17 1 460 16 477 1.10e-35 138
MS.gene069127.t1 MTR_5g066390 40.625 160 85 4 306 459 59 214 1.62e-35 131
MS.gene069127.t1 MTR_4g485590 28.710 411 243 13 3 401 7 379 1.82e-35 136
MS.gene069127.t1 MTR_0078s0060 31.955 266 150 9 212 455 205 461 1.60e-34 135
MS.gene069127.t1 MTR_7g012120 29.306 389 231 13 99 460 113 484 2.31e-34 134
MS.gene069127.t1 MTR_1g019520 36.408 206 112 5 269 455 3 208 6.45e-34 127
MS.gene069127.t1 MTR_2g098430 28.199 422 253 17 2 395 3 402 1.12e-33 132
MS.gene069127.t1 MTR_5g019580 30.526 285 154 9 201 452 198 471 1.37e-33 132
MS.gene069127.t1 MTR_5g019580 30.526 285 154 9 201 452 222 495 1.63e-33 132
MS.gene069127.t1 MTR_1g040310 34.742 213 122 5 266 461 273 485 2.11e-33 132
MS.gene069127.t1 MTR_5g039900 25.361 485 320 15 6 461 14 485 2.81e-33 132
MS.gene069127.t1 MTR_8g044140 34.884 215 121 5 266 461 236 450 3.88e-33 130
MS.gene069127.t1 MTR_4g082810 39.796 196 94 7 212 393 210 395 3.93e-33 130
MS.gene069127.t1 MTR_6g013435 28.863 343 187 10 120 459 18 306 4.09e-33 127
MS.gene069127.t1 MTR_5g029800 26.061 495 298 15 6 460 12 478 1.38e-32 129
MS.gene069127.t1 MTR_7g070870 37.931 203 111 5 265 461 267 460 1.40e-32 129
MS.gene069127.t1 MTR_7g039550 33.745 243 143 5 237 461 21 263 4.05e-32 124
MS.gene069127.t1 MTR_8g032950 32.258 279 161 7 211 462 206 483 4.39e-32 128
MS.gene069127.t1 MTR_8g074550 28.212 397 220 12 109 459 111 488 9.88e-31 124
MS.gene069127.t1 MTR_7g470610 36.788 193 114 6 216 401 76 267 2.74e-30 119
MS.gene069127.t1 MTR_7g070583 36.788 193 114 6 216 401 76 267 2.74e-30 119
MS.gene069127.t1 MTR_6g078320 30.196 255 152 7 211 447 221 467 6.34e-30 122
MS.gene069127.t1 MTR_6g014000 41.045 134 78 1 326 458 21 154 1.69e-29 120
MS.gene069127.t1 MTR_7g067330 25.934 455 265 15 5 451 9 399 1.71e-29 120
MS.gene069127.t1 MTR_7g071050 34.673 199 111 5 263 442 224 422 2.69e-28 116
MS.gene069127.t1 MTR_5g072850 30.556 324 162 11 156 456 95 378 4.53e-28 115
MS.gene069127.t1 MTR_8g009840 35.714 196 104 6 287 461 333 527 1.94e-27 115
MS.gene069127.t1 MTR_7g080960 31.250 224 104 5 240 461 294 469 3.50e-27 114
MS.gene069127.t1 MTR_7g067120 26.697 442 263 16 5 433 9 402 4.20e-27 113
MS.gene069127.t1 MTR_8g466240 24.740 481 297 16 5 457 8 451 9.39e-27 112
MS.gene069127.t1 MTR_5g027210 29.885 261 154 8 214 447 212 470 1.52e-26 112
MS.gene069127.t1 MTR_6g036650 27.543 403 262 13 5 395 18 402 1.28e-25 109
MS.gene069127.t1 MTR_3g009490 34.783 184 98 6 296 457 3 186 1.40e-25 103
MS.gene069127.t1 MTR_8g056740 43.478 138 76 2 269 405 167 303 1.41e-25 108
MS.gene069127.t1 MTR_6g042310 24.499 449 303 14 5 439 18 444 7.00e-25 107
MS.gene069127.t1 MTR_6g013890 25.506 247 128 5 180 424 46 238 7.39e-25 103
MS.gene069127.t1 MTR_8g068360 25.971 412 259 14 5 395 12 398 5.26e-24 104
MS.gene069127.t1 MTR_0536s0030 39.241 158 79 4 321 461 196 353 7.13e-24 102
MS.gene069127.t1 MTR_1g090270 23.947 451 291 17 5 433 15 435 1.14e-23 103
MS.gene069127.t1 MTR_8g007565 24.020 408 278 10 2 393 4 395 1.15e-23 103
MS.gene069127.t1 MTR_4g123553 24.433 397 275 11 5 395 15 392 1.21e-23 103
MS.gene069127.t1 MTR_8g007650 24.020 408 278 10 2 393 4 395 2.74e-23 102
MS.gene069127.t1 MTR_7g070760 33.163 196 105 4 211 403 29 201 4.99e-23 97.1
MS.gene069127.t1 MTR_2g008220 25.990 404 265 14 5 395 14 396 5.54e-23 101
MS.gene069127.t1 MTR_2g008225 27.047 403 262 15 5 395 15 397 1.55e-22 100
MS.gene069127.t1 MTR_5g066410 24.561 399 260 11 8 393 1 371 1.68e-22 100
MS.gene069127.t1 MTR_8g068330 39.844 128 73 2 272 395 268 395 2.27e-22 99.8
MS.gene069127.t1 MTR_5g090690 32.353 204 107 7 190 371 111 305 7.95e-22 97.4
MS.gene069127.t1 MTR_8g068340 40.625 128 72 2 272 395 272 399 1.66e-21 97.4
MS.gene069127.t1 MTR_2g008226 24.558 452 305 17 5 435 10 446 1.69e-21 97.4
MS.gene069127.t1 MTR_1g107325 33.333 153 95 2 315 460 201 353 4.66e-21 94.7
MS.gene069127.t1 MTR_7g070995 35.461 141 75 3 337 461 6 146 4.91e-21 90.1
MS.gene069127.t1 MTR_4g077960 24.873 394 257 13 15 395 2 369 6.04e-21 95.5
MS.gene069127.t1 MTR_8g006230 31.441 229 135 8 105 329 49 259 2.94e-20 90.9
MS.gene069127.t1 MTR_4g079250 24.490 441 286 15 5 425 8 421 6.18e-20 92.4
MS.gene069127.t1 MTR_2g046620 23.684 418 252 13 5 395 16 393 1.08e-19 91.7
MS.gene069127.t1 MTR_3g479620 33.523 176 90 5 2 162 3 166 3.92e-19 85.1
MS.gene069127.t1 MTR_3g435310 37.302 126 77 2 271 395 227 351 1.27e-18 88.2
MS.gene069127.t1 MTR_2g014900 22.851 442 291 13 5 425 7 419 5.67e-18 86.7
MS.gene069127.t1 MTR_4g079270 23.543 446 293 16 5 430 8 425 2.60e-17 84.3
MS.gene069127.t1 MTR_4g059370 30.201 149 98 3 272 414 190 338 3.63e-16 80.5
MS.gene069127.t1 MTR_0199s0010 25.514 243 165 6 5 235 10 248 2.28e-15 76.6
MS.gene069127.t1 MTR_0475s0030 46.377 69 36 1 355 423 13 80 2.32e-14 69.3
MS.gene069127.t1 MTR_6g014195 28.358 201 123 8 4 186 9 206 1.64e-13 70.1
MS.gene069127.t1 MTR_8g028755 34.783 115 58 4 266 380 97 194 1.73e-12 67.4
MS.gene069127.t1 MTR_2g083490 22.170 424 281 14 1 404 1 395 1.31e-11 66.6
MS.gene069127.t1 MTR_2g083380 21.564 422 284 13 1 403 18 411 2.14e-11 66.2
MS.gene069127.t1 MTR_2g083430 22.628 411 284 14 5 404 8 395 2.67e-11 65.9
MS.gene069127.t1 MTR_6g015160 49.020 51 25 1 355 404 30 80 3.27e-11 60.1
MS.gene069127.t1 MTR_0475s0020 43.478 69 37 1 2 70 7 73 3.92e-11 62.8
MS.gene069127.t1 MTR_6g052375 31.915 188 99 10 169 346 24 192 5.84e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069127.t1 AT1G22380 36.232 483 271 10 2 459 10 480 8.66e-100 308
MS.gene069127.t1 AT1G22400 33.888 481 280 10 2 456 10 478 6.39e-95 295
MS.gene069127.t1 AT1G22360 35.331 484 268 11 5 459 10 477 2.81e-92 288
MS.gene069127.t1 AT1G22370 35.908 479 273 11 2 459 10 475 1.39e-90 284
MS.gene069127.t1 AT1G78270 36.134 476 281 12 2 459 10 480 1.15e-89 281
MS.gene069127.t1 AT1G22360 35.611 483 256 13 5 459 10 465 1.21e-89 281
MS.gene069127.t1 AT1G22340 35.774 478 281 12 2 459 10 481 1.60e-89 281
MS.gene069127.t1 AT3G11340 35.307 473 267 14 1 461 1 446 1.07e-78 252
MS.gene069127.t1 AT3G55710 33.263 472 275 15 6 461 9 456 5.81e-74 240
MS.gene069127.t1 AT5G05900 33.192 473 263 14 6 459 9 447 2.35e-71 233
MS.gene069127.t1 AT5G05880 33.546 471 271 13 5 461 8 450 2.48e-71 233
MS.gene069127.t1 AT3G55700 32.700 474 273 13 5 461 8 452 2.59e-70 230
MS.gene069127.t1 AT5G05860 32.766 470 270 12 5 459 9 447 2.22e-69 228
MS.gene069127.t1 AT5G05890 32.919 483 262 16 5 461 8 454 2.66e-69 228
MS.gene069127.t1 AT3G46670 32.135 473 274 16 5 461 9 450 1.74e-66 220
MS.gene069127.t1 AT3G46660 33.053 475 267 15 6 461 15 457 2.12e-66 220
MS.gene069127.t1 AT5G05870 31.568 472 281 13 5 459 8 454 1.69e-64 215
MS.gene069127.t1 AT3G46680 30.932 472 278 14 2 456 6 446 4.21e-64 214
MS.gene069127.t1 AT5G38010 32.051 468 281 13 5 459 10 453 1.10e-63 213
MS.gene069127.t1 AT5G59580 31.435 474 273 16 5 460 9 448 1.49e-62 210
MS.gene069127.t1 AT3G46700 31.743 482 268 15 1 461 5 446 3.12e-62 209
MS.gene069127.t1 AT1G22370 38.816 304 177 7 163 459 4 305 7.49e-62 204
MS.gene069127.t1 AT5G59590 31.646 474 265 16 5 456 10 446 2.66e-61 206
MS.gene069127.t1 AT4G15480 30.851 470 296 12 5 457 19 476 5.27e-61 207
MS.gene069127.t1 AT3G46720 31.303 476 272 18 2 461 6 442 1.97e-60 204
MS.gene069127.t1 AT5G38040 31.034 464 267 15 13 457 18 447 2.71e-60 204
MS.gene069127.t1 AT3G02100 31.368 475 290 14 1 461 9 461 8.72e-60 203
MS.gene069127.t1 AT2G43820 30.672 476 277 17 5 461 7 448 2.02e-59 201
MS.gene069127.t1 AT2G43840 29.512 471 287 14 5 460 7 447 8.76e-59 200
MS.gene069127.t1 AT2G43840 29.958 474 281 16 5 460 7 447 1.14e-58 199
MS.gene069127.t1 AT3G46690 31.250 480 278 15 1 461 5 451 1.18e-58 199
MS.gene069127.t1 AT2G23260 32.128 470 278 18 5 459 10 453 4.56e-57 196
MS.gene069127.t1 AT3G46650 28.785 469 274 13 5 459 10 432 5.22e-57 195
MS.gene069127.t1 AT2G26480 28.664 464 294 13 6 459 9 445 1.17e-56 194
MS.gene069127.t1 AT3G21560 29.474 475 299 14 4 457 11 470 7.52e-56 193
MS.gene069127.t1 AT4G15490 29.289 478 290 16 5 456 8 463 7.43e-54 187
MS.gene069127.t1 AT4G15500 28.814 472 297 12 4 456 8 459 1.01e-53 187
MS.gene069127.t1 AT1G05675 30.913 482 271 15 2 456 3 449 3.46e-53 185
MS.gene069127.t1 AT2G23250 31.887 461 273 15 14 462 7 438 5.91e-53 184
MS.gene069127.t1 AT2G28080 29.103 457 280 15 10 443 23 458 1.96e-52 184
MS.gene069127.t1 AT2G36970 28.542 480 305 13 4 461 9 472 5.21e-52 183
MS.gene069127.t1 AT2G31750 28.480 467 302 14 5 459 8 454 2.86e-51 180
MS.gene069127.t1 AT2G31750 28.480 467 302 14 5 459 8 454 1.08e-50 179
MS.gene069127.t1 AT1G05680 29.752 484 274 16 2 456 3 449 7.44e-50 176
MS.gene069127.t1 AT2G31790 27.350 468 302 15 5 456 8 453 1.02e-49 176
MS.gene069127.t1 AT5G17050 32.143 364 219 12 104 459 113 456 1.81e-49 175
MS.gene069127.t1 AT5G26310 31.020 490 262 21 4 452 6 460 1.94e-49 176
MS.gene069127.t1 AT5G17040 28.866 485 273 20 1 459 1 439 4.19e-49 174
MS.gene069127.t1 AT2G36770 28.942 501 292 18 5 461 14 494 5.29e-49 175
MS.gene069127.t1 AT4G15550 27.200 500 276 17 4 456 12 470 7.17e-49 174
MS.gene069127.t1 AT3G16520 29.747 474 289 17 6 457 6 457 9.79e-49 173
MS.gene069127.t1 AT2G15480 28.687 495 291 17 2 457 7 478 1.78e-48 173
MS.gene069127.t1 AT2G36780 28.660 485 306 15 5 459 14 488 3.19e-48 173
MS.gene069127.t1 AT2G15480 28.317 505 290 17 2 457 7 488 1.29e-47 171
MS.gene069127.t1 AT5G17040 33.657 309 173 11 163 459 49 337 2.40e-47 167
MS.gene069127.t1 AT2G36760 30.600 500 289 21 5 463 14 496 3.32e-47 170
MS.gene069127.t1 AT2G15490 30.972 494 281 19 2 457 4 475 3.97e-47 169
MS.gene069127.t1 AT1G24100 29.607 483 277 19 5 459 11 458 4.85e-47 169
MS.gene069127.t1 AT2G15490 30.785 497 281 19 2 457 4 478 1.36e-46 168
MS.gene069127.t1 AT3G16520 30.435 437 262 16 6 420 6 422 1.93e-46 167
MS.gene069127.t1 AT3G16520 30.435 437 262 16 6 420 6 422 2.46e-46 167
MS.gene069127.t1 AT1G01420 30.233 473 265 17 3 442 6 446 2.86e-46 167
MS.gene069127.t1 AT4G01070 29.339 484 281 15 2 452 5 460 2.93e-46 167
MS.gene069127.t1 AT1G01420 30.233 473 265 17 3 442 9 449 3.56e-46 167
MS.gene069127.t1 AT5G66690 29.897 485 264 19 4 448 6 454 6.90e-46 166
MS.gene069127.t1 AT2G36800 28.337 487 306 15 5 459 12 487 1.03e-45 166
MS.gene069127.t1 AT1G05530 27.968 497 277 20 1 459 1 454 6.56e-45 163
MS.gene069127.t1 AT1G30530 30.579 363 230 10 101 459 106 450 2.13e-44 161
MS.gene069127.t1 AT4G34138 28.106 491 290 15 5 457 11 476 3.25e-44 162
MS.gene069127.t1 AT1G05560 28.226 496 274 21 1 459 1 451 4.25e-44 161
MS.gene069127.t1 AT1G05560 28.226 496 274 21 1 459 51 501 6.84e-44 161
MS.gene069127.t1 AT4G34131 27.664 488 306 17 5 461 10 481 9.95e-44 160
MS.gene069127.t1 AT5G17030 29.589 365 230 11 104 459 109 455 2.01e-43 159
MS.gene069127.t1 AT3G53160 34.028 288 134 8 214 463 217 486 7.25e-43 158
MS.gene069127.t1 AT2G36790 29.000 500 285 19 5 459 13 487 1.34e-42 157
MS.gene069127.t1 AT1G01390 30.569 422 235 16 3 395 6 398 2.49e-42 156
MS.gene069127.t1 AT2G36750 29.058 499 285 20 5 459 10 483 2.58e-42 157
MS.gene069127.t1 AT1G01390 30.569 422 235 16 3 395 23 415 4.09e-42 156
MS.gene069127.t1 AT4G34135 28.370 497 292 14 5 461 11 483 6.37e-42 155
MS.gene069127.t1 AT3G50740 29.713 488 266 20 4 447 6 460 8.92e-42 155
MS.gene069127.t1 AT2G29710 25.911 494 305 15 1 462 1 465 2.84e-41 153
MS.gene069127.t1 AT5G03490 28.337 487 276 19 2 457 16 460 4.94e-41 152
MS.gene069127.t1 AT3G22250 26.411 443 285 16 2 423 5 427 1.22e-40 151
MS.gene069127.t1 AT2G30140 28.151 476 292 17 5 463 13 455 1.83e-40 151
MS.gene069127.t1 AT2G30140 28.151 476 291 17 5 463 13 454 2.34e-40 150
MS.gene069127.t1 AT1G73880 26.569 478 307 16 5 461 14 468 3.87e-39 147
MS.gene069127.t1 AT3G21790 26.157 497 303 17 5 459 4 478 3.94e-39 148
MS.gene069127.t1 AT4G14090 27.941 476 285 19 4 456 12 452 7.75e-39 146
MS.gene069127.t1 AT2G29730 24.646 495 314 16 1 464 1 467 2.04e-38 145
MS.gene069127.t1 AT1G07250 27.651 481 283 20 7 448 7 461 1.08e-36 141
MS.gene069127.t1 AT4G15260 31.985 272 150 7 211 457 91 352 5.83e-36 136
MS.gene069127.t1 AT1G51210 26.190 462 264 14 4 435 19 433 1.38e-35 137
MS.gene069127.t1 AT3G21800 29.858 422 253 17 6 404 5 406 1.85e-35 137
MS.gene069127.t1 AT2G18570 28.283 495 276 19 1 452 1 459 2.13e-35 137
MS.gene069127.t1 AT2G29740 26.955 486 296 18 7 456 9 471 2.15e-35 137
MS.gene069127.t1 AT3G21760 25.352 497 309 14 5 459 4 480 3.65e-35 137
MS.gene069127.t1 AT3G21780 25.358 489 303 17 5 457 4 466 5.01e-35 136
MS.gene069127.t1 AT5G14860 27.470 506 274 23 5 457 8 473 1.49e-34 135
MS.gene069127.t1 AT2G29750 25.773 485 311 16 2 456 5 470 2.72e-34 134
MS.gene069127.t1 AT1G07240 31.475 305 181 10 172 459 182 475 2.74e-34 134
MS.gene069127.t1 AT4G36770 33.603 247 128 9 217 443 217 447 3.15e-34 134
MS.gene069127.t1 AT4G15280 26.148 501 289 19 5 457 4 471 1.78e-33 132
MS.gene069127.t1 AT1G10400 34.050 279 155 11 190 456 198 459 1.82e-33 132
MS.gene069127.t1 AT4G15280 26.148 501 289 19 5 457 36 503 2.71e-33 132
MS.gene069127.t1 AT2G30150 26.115 471 301 17 5 459 13 452 6.17e-33 130
MS.gene069127.t1 AT3G21750 25.247 507 295 17 5 464 4 473 8.97e-33 130
MS.gene069127.t1 AT1G07260 33.333 234 134 6 236 456 244 468 2.65e-32 129
MS.gene069127.t1 AT5G37950 32.130 277 164 8 106 378 81 337 3.06e-32 126
MS.gene069127.t1 AT2G30150 25.966 466 298 17 10 459 2 436 1.65e-31 125
MS.gene069127.t1 AT2G18560 32.374 278 141 11 207 452 107 369 2.90e-31 124
MS.gene069127.t1 AT5G37950 32.014 278 169 9 106 378 81 343 2.91e-31 123
MS.gene069127.t1 AT3G53150 31.429 280 157 9 214 459 231 509 7.17e-31 125
MS.gene069127.t1 AT2G16890 24.116 481 317 17 5 459 9 467 1.45e-28 118
MS.gene069127.t1 AT5G12890 32.959 267 144 12 213 456 224 478 4.22e-28 117
MS.gene069127.t1 AT5G49690 25.996 477 295 17 2 459 7 444 8.05e-27 112
MS.gene069127.t1 AT1G06000 31.179 263 152 10 214 456 177 430 2.65e-26 111
MS.gene069127.t1 AT2G16890 24.940 417 274 14 5 404 9 403 2.90e-26 110
MS.gene069127.t1 AT5G65550 25.301 415 271 10 5 403 9 400 3.92e-25 108
MS.gene069127.t1 AT4G01070 27.964 329 195 9 2 316 5 305 1.66e-20 92.8
MS.gene069127.t1 AT5G54010 24.038 416 264 15 5 404 6 385 3.26e-19 90.1
MS.gene069127.t1 AT2G22590 39.062 128 74 2 272 395 274 401 1.42e-17 85.5
MS.gene069127.t1 AT1G64910 23.430 414 269 14 2 404 3 379 1.95e-15 78.6
MS.gene069127.t1 AT4G27560 21.687 415 272 15 5 403 7 384 3.71e-15 77.8
MS.gene069127.t1 AT5G53990 31.884 138 87 3 272 404 244 379 2.00e-14 75.5
MS.gene069127.t1 AT4G27570 21.635 416 271 14 5 403 7 384 4.36e-14 74.7
MS.gene069127.t1 AT3G29630 23.188 414 266 13 5 404 6 381 1.16e-13 73.2
MS.gene069127.t1 AT5G54060 21.696 401 282 8 6 394 14 394 5.49e-13 71.2
MS.gene069127.t1 AT4G09500 24.331 411 261 15 5 403 6 378 1.34e-12 69.7
MS.gene069127.t1 AT4G09500 31.538 130 82 4 279 403 226 353 1.51e-11 66.6
MS.gene069127.t1 AT2G22930 23.002 413 268 14 3 403 4 378 2.00e-11 66.2

Find 96 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATACTGAATCAAATTT+TGG 0.160775 5.3:-20547031 None:intergenic
AGGCTTACCATACATATTTA+TGG 0.193194 5.3:-20544424 None:intergenic
TGGGGACTTGAAGACGAATT+TGG 0.196816 5.3:-20546362 None:intergenic
TGCTATTGAAATGGCGGATT+TGG 0.219461 5.3:+20546965 MS.gene069127:CDS
ACTGATTTGGCTCATGAGTT+TGG 0.265323 5.3:+20544519 MS.gene069127:CDS
ATTATATAATATACCTCTAA+TGG 0.273452 5.3:-20544631 None:intergenic
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5.3:-20546816 None:intergenic
GTGAGTGAGGTTTGGAGAAT+TGG 0.287683 5.3:+20546852 MS.gene069127:CDS
GACGAATTTGGGAGAGAATT+GGG 0.312540 5.3:-20546350 None:intergenic
CCAAACATGGTACAAGAAAA+AGG 0.313624 5.3:+20546624 MS.gene069127:CDS
AAAATTTGATTCAGTATATA+AGG 0.317414 5.3:+20547033 MS.gene069127:CDS
AAGGAGAAGCATCCTGGATT+TGG 0.317655 5.3:+20544375 MS.gene069127:CDS
CTGATTTGGCTCATGAGTTT+GGG 0.337441 5.3:+20544520 MS.gene069127:CDS
GAGAACAAATACTTGAGATT+TGG 0.337499 5.3:+20546556 MS.gene069127:CDS
AGACGAATTTGGGAGAGAAT+TGG 0.347001 5.3:-20546351 None:intergenic
GGGGACTTGAAGACGAATTT+GGG 0.347598 5.3:-20546361 None:intergenic
CTGATCAACAAATTAATAGT+AGG 0.360356 5.3:+20546826 MS.gene069127:CDS
CCACCCACTATGTGTCAAAA+AGG 0.361214 5.3:-20546745 None:intergenic
TGGTATTGAGGTGGTGGTGA+AGG 0.367888 5.3:-20546404 None:intergenic
TGAGTGAGGTTTGGAGAATT+GGG 0.369652 5.3:+20546853 MS.gene069127:CDS
GGGCCAATAGTGTAGAGTTT+GGG 0.371521 5.3:-20546381 None:intergenic
AAACTTTATCTAAAACGATA+TGG 0.371646 5.3:-20546260 None:intergenic
CAAAATAAGGAGAAGCATCC+TGG 0.377170 5.3:+20544369 MS.gene069127:CDS
TTTCTGTATGCCCAAGCTCT+TGG 0.383561 5.3:+20544593 MS.gene069127:CDS
TAGGAATGTTGTTGAGAAAA+TGG 0.389004 5.3:+20546899 MS.gene069127:CDS
CATTGACTTTAAGCGATAGT+TGG 0.392299 5.3:-20546293 None:intergenic
TGTGGACGTACTCAGTGTTT+AGG 0.392583 5.3:-20544263 None:intergenic
GTAGGTTTGTGAGTGAGGTT+TGG 0.393510 5.3:+20546844 MS.gene069127:CDS
TTCAAGATCTGCTATTGAAA+TGG 0.395191 5.3:+20546956 MS.gene069127:CDS
TGGTGACCTTGCTACTGATT+TGG 0.401952 5.3:+20544506 MS.gene069127:CDS
GGTATTGAGGTGGTGGTGAA+GGG 0.403113 5.3:-20546403 None:intergenic
CTGTTGGTGCTTGTGCCGTC+TGG 0.405592 5.3:+20544565 MS.gene069127:CDS
GTCCCCAAACTCTACACTAT+TGG 0.413746 5.3:+20546378 MS.gene069127:CDS
CTCATTGCACTCCAAGAGCT+TGG 0.419151 5.3:-20544604 None:intergenic
TGCAATGAGCTTCCCATTAG+AGG 0.422593 5.3:+20544618 MS.gene069127:CDS
GGGGCCAATAGTGTAGAGTT+TGG 0.424125 5.3:-20546382 None:intergenic
ATGGTCTTGAATTGAAGCTT+AGG 0.425350 5.3:-20544336 None:intergenic
GAGAATTGGGTTGGATATGA+AGG 0.449432 5.3:+20546866 MS.gene069127:CDS
TCAGTTGTATATGTCAGCTT+TGG 0.454013 5.3:+20546513 MS.gene069127:CDS
GAAAGGGATGATTGTGGGGT+GGG 0.454518 5.3:+20546683 MS.gene069127:CDS
ACTTTGGAGAGTGTGATTTG+TGG 0.454735 5.3:+20546774 MS.gene069127:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5.3:-20546801 None:intergenic
TTGTTGTAGGAGGAACCATT+AGG 0.462958 5.3:-20547005 None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG 0.463911 5.3:+20546990 MS.gene069127:CDS
GCTTGAGCATTGAGTTTACA+TGG 0.467346 5.3:-20544200 None:intergenic
TTATATAATATACCTCTAAT+GGG 0.468088 5.3:-20544630 None:intergenic
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5.3:+20546678 MS.gene069127:CDS
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5.3:+20546839 MS.gene069127:CDS
ATTGACTTTAAGCGATAGTT+GGG 0.475439 5.3:-20546292 None:intergenic
ATTTCCTCCATAAATATGTA+TGG 0.483586 5.3:+20544417 MS.gene069127:CDS
ACCATTAGGACTTACACTCT+TGG 0.484150 5.3:-20546991 None:intergenic
TCATTGCACTCCAAGAGCTT+GGG 0.494921 5.3:-20544603 None:intergenic
GAGTTTACATGGCCTTGTGC+TGG 0.498291 5.3:-20544189 None:intergenic
CAACTGCAATTTCTTCAAAG+TGG 0.498490 5.3:+20546449 MS.gene069127:CDS
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5.3:+20546666 MS.gene069127:CDS
TCAAACTAATGAGTCGGTTG+TGG 0.503765 5.3:-20544281 None:intergenic
TGGTCTTGAATTGAAGCTTA+GGG 0.509318 5.3:-20544335 None:intergenic
ACATGGCCTTGTGCTGGACA+TGG 0.511830 5.3:-20544183 None:intergenic
TGAGGTTTGGAGAATTGGGT+TGG 0.516327 5.3:+20546857 MS.gene069127:CDS
ATATGAAGGATGTTTGTGAT+AGG 0.519622 5.3:+20546880 MS.gene069127:CDS
ACAATAATATCTCTTAAAGA+AGG 0.522945 5.3:-20544444 None:intergenic
CATAAGAAACGTGCCAGTCA+TGG 0.524294 5.3:+20546182 MS.gene069127:CDS
CGAAGTATGTTCTCCATGAC+TGG 0.528327 5.3:-20546195 None:intergenic
CAAATACTTGAGATTTGGCA+TGG 0.534020 5.3:+20546561 MS.gene069127:CDS
AGAATCGAGCCATGTCATGC+AGG 0.539051 5.3:-20546478 None:intergenic
ACGAATTTGGGAGAGAATTG+GGG 0.540729 5.3:-20546349 None:intergenic
TGTAGAGATCTACCACGTTT+CGG 0.543625 5.3:+20546219 MS.gene069127:CDS
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5.3:+20546758 MS.gene069127:CDS
GTATTGAGGTGGTGGTGAAG+GGG 0.546856 5.3:-20546402 None:intergenic
TGTGACAAAACTTCCTCTTG+TGG 0.551208 5.3:-20546708 None:intergenic
GTGGAGTGCCTATGATATGT+TGG 0.555355 5.3:+20546793 MS.gene069127:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5.3:+20546648 MS.gene069127:CDS
AAGATCTGCTATTGAAATGG+CGG 0.566824 5.3:+20546959 MS.gene069127:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5.3:+20546677 MS.gene069127:CDS
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5.3:+20546644 MS.gene069127:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5.3:+20546682 MS.gene069127:CDS
GTGGGTGATTAGGCCAAACA+TGG 0.589150 5.3:+20546611 MS.gene069127:CDS
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5.3:-20544182 None:intergenic
TGGATAAAACCTGCATGACA+TGG 0.590971 5.3:+20546469 MS.gene069127:CDS
TGTGGGGTGGGTTCCACAAG+AGG 0.592500 5.3:+20546695 MS.gene069127:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5.3:+20546667 MS.gene069127:CDS
TGATATTATGACGAACAAGA+AGG 0.598411 5.3:+20546926 MS.gene069127:CDS
CATCATTCAAACTAATGAGT+CGG 0.601772 5.3:-20544287 None:intergenic
ATCTTCCCATGTCCAGCACA+AGG 0.602792 5.3:+20544177 MS.gene069127:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5.3:+20546679 MS.gene069127:CDS
TATTGAGGTGGTGGTGAAGG+GGG 0.607014 5.3:-20546401 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.607205 5.3:-20546380 None:intergenic
ATTTATAGGAGACAAGGACA+TGG 0.607396 5.3:+20546152 MS.gene069127:intron
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5.3:+20546649 MS.gene069127:CDS
TGTTTAATTTATAGGAGACA+AGG 0.619236 5.3:+20546146 MS.gene069127:intron
CTTACCATACATATTTATGG+AGG 0.622125 5.3:-20544421 None:intergenic
CATGAGCCAAATCAGTAGCA+AGG 0.637420 5.3:-20544512 None:intergenic
TTGTTTGTTGTACCGAAACG+TGG 0.638132 5.3:-20546231 None:intergenic
TTTCGGTACAACAAACAAAG+AGG 0.658970 5.3:+20546236 MS.gene069127:CDS
TATTATGACGAACAAGAAGG+AGG 0.683051 5.3:+20546929 MS.gene069127:CDS
CATGGGAAGATTAACACATG+TGG 0.740669 5.3:-20544165 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAATCAAGAAATT+AGG - chr5.3:20544856-20544875 None:intergenic 10.0%
!! ATAATTAAATCAAGAAATTA+GGG - chr5.3:20544855-20544874 None:intergenic 10.0%
!!! ATTATATATATTTTTGTGAA+GGG + chr5.3:20545832-20545851 MS.gene069127:intron 10.0%
!!! TTTTCTTTTATAAATAAGAT+CGG - chr5.3:20544664-20544683 None:intergenic 10.0%
!! AAAATTTGATTCAGTATATA+AGG + chr5.3:20547033-20547052 MS.gene069127:CDS 15.0%
!! ACAAAAATCAAAAAACTAAT+AGG - chr5.3:20545578-20545597 None:intergenic 15.0%
!! AGATAAGTTTAAATAAAATG+AGG - chr5.3:20545002-20545021 None:intergenic 15.0%
!! ATTATATAATATACCTCTAA+TGG - chr5.3:20544634-20544653 None:intergenic 15.0%
!! TAAGTAAAAAGAAAAAAGAT+AGG - chr5.3:20545238-20545257 None:intergenic 15.0%
!! TAATAGTAGATAAGTTTATT+GGG - chr5.3:20546031-20546050 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG - chr5.3:20544854-20544873 None:intergenic 15.0%
!! TATATTTGTAAAAGACATTT+AGG - chr5.3:20544751-20544770 None:intergenic 15.0%
!! TTATATAATATACCTCTAAT+GGG - chr5.3:20544633-20544652 None:intergenic 15.0%
!!! GATTATATATATTTTTGTGA+AGG + chr5.3:20545831-20545850 MS.gene069127:intron 15.0%
!!! TATTAGTTTTTTGATTTTTG+TGG + chr5.3:20545577-20545596 MS.gene069127:intron 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5.3:20547034-20547053 None:intergenic 15.0%
!!! TTATATATATTTTTGTGAAG+GGG + chr5.3:20545833-20545852 MS.gene069127:intron 15.0%
!! AAAAAATATTAAAACGTGAG+AGG - chr5.3:20545506-20545525 None:intergenic 20.0%
!! ACAATAATATCTCTTAAAGA+AGG - chr5.3:20544447-20544466 None:intergenic 20.0%
!! GTAATAGTAGATAAGTTTAT+TGG - chr5.3:20546032-20546051 None:intergenic 20.0%
!! TTAATACTCACTATCTTATT+GGG + chr5.3:20545068-20545087 MS.gene069127:intron 20.0%
!! TTATTGGATAAAACTTATGT+GGG - chr5.3:20545147-20545166 None:intergenic 20.0%
!! TTTAATACTCACTATCTTAT+TGG + chr5.3:20545067-20545086 MS.gene069127:intron 20.0%
!! TTTATTGGATAAAACTTATG+TGG - chr5.3:20545148-20545167 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG - chr5.3:20546263-20546282 None:intergenic 20.0%
!!! AGATGATGTTGTTTTTTTTA+TGG - chr5.3:20546427-20546446 None:intergenic 20.0%
!!! CTTTTACAAATATAAACGAA+AGG + chr5.3:20544757-20544776 MS.gene069127:intron 20.0%
!!! TAGTAGATAAGTTTTTTTGA+AGG - chr5.3:20546056-20546075 None:intergenic 20.0%
!!! TCAAACACATATTCTTTTAT+TGG - chr5.3:20545163-20545182 None:intergenic 20.0%
!!! TTGTTTTTTTTATGGTATTG+AGG - chr5.3:20546419-20546438 None:intergenic 20.0%
! AAAAAATATTAAAACGCGAG+AGG - chr5.3:20545544-20545563 None:intergenic 25.0%
! AAATAGAGAAGAGAGAAATA+GGG + chr5.3:20545278-20545297 MS.gene069127:intron 25.0%
! AGATAGGTGTATAAAATAAG+AGG - chr5.3:20545222-20545241 None:intergenic 25.0%
! ATCGCTCTTTAATAGAAATT+GGG - chr5.3:20545708-20545727 None:intergenic 25.0%
! ATCTTATTGGGTAATCTATA+TGG + chr5.3:20545080-20545099 MS.gene069127:intron 25.0%
! ATTATACATATGCAAATGCA+AGG + chr5.3:20544873-20544892 MS.gene069127:intron 25.0%
! ATTTCCTCCATAAATATGTA+TGG + chr5.3:20544417-20544436 MS.gene069127:CDS 25.0%
! CTGATCAACAAATTAATAGT+AGG + chr5.3:20546826-20546845 MS.gene069127:CDS 25.0%
! GCAAATAAACTATGAAAACA+TGG - chr5.3:20545467-20545486 None:intergenic 25.0%
! TATCGCTCTTTAATAGAAAT+TGG - chr5.3:20545709-20545728 None:intergenic 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG + chr5.3:20546592-20546611 MS.gene069127:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5.3:20546819-20546838 None:intergenic 25.0%
!! CATCTCTGATTTTCAAAATA+AGG + chr5.3:20544356-20544375 MS.gene069127:CDS 25.0%
!! CTTTTATAAATAAGATCGGA+TGG - chr5.3:20544660-20544679 None:intergenic 25.0%
!! GTTCTCGTTGTTTAATTTAT+AGG + chr5.3:20546138-20546157 MS.gene069127:intron 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG + chr5.3:20546593-20546612 MS.gene069127:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5.3:20547031-20547050 None:intergenic 25.0%
!! TGTTTAATTTATAGGAGACA+AGG + chr5.3:20546146-20546165 MS.gene069127:intron 25.0%
!!! ACATATACAACTGATTTTGA+TGG - chr5.3:20546507-20546526 None:intergenic 25.0%
!!! ATATTTTTTGTACCATCACA+AGG + chr5.3:20545517-20545536 MS.gene069127:intron 25.0%
!!! ATTATTTTAGATGGAGGTTT+TGG + chr5.3:20544486-20544505 MS.gene069127:CDS 25.0%
!!! CTTATTTTGAAAATCAGAGA+TGG - chr5.3:20544358-20544377 None:intergenic 25.0%
!!! GTAAGTTGCATTATTTTAGA+TGG + chr5.3:20544477-20544496 MS.gene069127:CDS 25.0%
!!! TATCTTTGATTTTACGAGAA+AGG + chr5.3:20545017-20545036 MS.gene069127:intron 25.0%
!!! TATTTTTTGTACCATCACAA+GGG + chr5.3:20545518-20545537 MS.gene069127:intron 25.0%
!!! TTTTTTTTATGGTATTGAGG+TGG - chr5.3:20546416-20546435 None:intergenic 25.0%
AAATAAGGCCAACATATCAT+AGG - chr5.3:20546804-20546823 None:intergenic 30.0%
AATAGAGAAGAGAGAAATAG+GGG + chr5.3:20545279-20545298 MS.gene069127:intron 30.0%
ACAAGAAAAAGGACTATTGA+AGG + chr5.3:20546635-20546654 MS.gene069127:CDS 30.0%
AGGCTTACCATACATATTTA+TGG - chr5.3:20544427-20544446 None:intergenic 30.0%
ATAAGTTTATTGGGTGTGTT+TGG - chr5.3:20546022-20546041 None:intergenic 30.0%
ATATGAAGGATGTTTGTGAT+AGG + chr5.3:20546880-20546899 MS.gene069127:CDS 30.0%
ATTGAAGAGAGAGAAATTGA+AGG + chr5.3:20545355-20545374 MS.gene069127:intron 30.0%
CATCATTCAAACTAATGAGT+CGG - chr5.3:20544290-20544309 None:intergenic 30.0%
CTTACCATACATATTTATGG+AGG - chr5.3:20544424-20544443 None:intergenic 30.0%
GAAATAGAGAAGAGAGAAAT+AGG + chr5.3:20545277-20545296 MS.gene069127:intron 30.0%
GAAGTTGTAAAGAGAGAAAT+AGG - chr5.3:20545990-20546009 None:intergenic 30.0%
GAGAACAAATACTTGAGATT+TGG + chr5.3:20546556-20546575 MS.gene069127:CDS 30.0%
TAGGAATGTTGTTGAGAAAA+TGG + chr5.3:20546899-20546918 MS.gene069127:CDS 30.0%
TGATATTATGACGAACAAGA+AGG + chr5.3:20546926-20546945 MS.gene069127:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG + chr5.3:20546956-20546975 MS.gene069127:CDS 30.0%
TTGAAGAGAGAGAAATTGAA+GGG + chr5.3:20545356-20545375 MS.gene069127:intron 30.0%
TTTGCATAAATATACGACCA+AGG - chr5.3:20546099-20546118 None:intergenic 30.0%
! ATTGACTTTAAGCGATAGTT+GGG - chr5.3:20546295-20546314 None:intergenic 30.0%
! GATAGTGACTTTCTTTTGTT+TGG + chr5.3:20545320-20545339 MS.gene069127:intron 30.0%
! TTGATACATTTTCGTACTGT+TGG + chr5.3:20544549-20544568 MS.gene069127:CDS 30.0%
!!! AGTTGCATTATTTTAGATGG+AGG + chr5.3:20544480-20544499 MS.gene069127:CDS 30.0%
!!! CAAACTGCTTTTAGAGTTTT+TGG + chr5.3:20544921-20544940 MS.gene069127:intron 30.0%
AAAGAGAAAGGGATGATTGT+GGG + chr5.3:20546678-20546697 MS.gene069127:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG + chr5.3:20546959-20546978 MS.gene069127:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG + chr5.3:20546667-20546686 MS.gene069127:CDS 35.0%
ATTTATAGGAGACAAGGACA+TGG + chr5.3:20546152-20546171 MS.gene069127:intron 35.0%
CAAATACTTGAGATTTGGCA+TGG + chr5.3:20546561-20546580 MS.gene069127:CDS 35.0%
CAACTGCAATTTCTTCAAAG+TGG + chr5.3:20546449-20546468 MS.gene069127:CDS 35.0%
CATACAGAAAAAAGTCCAGA+CGG - chr5.3:20544583-20544602 None:intergenic 35.0%
CATACCACAATTCAAAACCT+TGG + chr5.3:20546079-20546098 MS.gene069127:intron 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5.3:20546624-20546643 MS.gene069127:CDS 35.0%
GAAAGATGTGAGAAATGTGA+TGG - chr5.3:20545943-20545962 None:intergenic 35.0%
TAAAGAGAAAGGGATGATTG+TGG + chr5.3:20546677-20546696 MS.gene069127:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG + chr5.3:20546839-20546858 MS.gene069127:CDS 35.0%
TATTATGACGAACAAGAAGG+AGG + chr5.3:20546929-20546948 MS.gene069127:CDS 35.0%
TCAGTTGTATATGTCAGCTT+TGG + chr5.3:20546513-20546532 MS.gene069127:CDS 35.0%
TTTCGGTACAACAAACAAAG+AGG + chr5.3:20546236-20546255 MS.gene069127:CDS 35.0%
! AACGATTTTTGTGGGTGATT+AGG + chr5.3:20546601-20546620 MS.gene069127:CDS 35.0%
! ACAATGTTTTCTCCAAATCC+AGG - chr5.3:20544390-20544409 None:intergenic 35.0%
! ACTCTAAAAGCAGTTTGAGA+CGG - chr5.3:20544918-20544937 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG - chr5.3:20544339-20544358 None:intergenic 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5.3:20546627-20546646 None:intergenic 35.0%
! GTTTTGTCACACAAAGCAAT+TGG + chr5.3:20546720-20546739 MS.gene069127:CDS 35.0%
! TGGTCTTGAATTGAAGCTTA+GGG - chr5.3:20544338-20544357 None:intergenic 35.0%
!! ATTTTTGTGAAGGGGCATAT+TGG + chr5.3:20545841-20545860 MS.gene069127:intron 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5.3:20547021-20547040 None:intergenic 35.0%
!! CATTGACTTTAAGCGATAGT+TGG - chr5.3:20546296-20546315 None:intergenic 35.0%
!! GACTTTCTTTTGTTTGGTTC+AGG + chr5.3:20545326-20545345 MS.gene069127:intron 35.0%
!! GATGGATTTGAGGTATTGTT+TGG - chr5.3:20545925-20545944 None:intergenic 35.0%
!! TGAGAAATGTGATGGATTTG+AGG - chr5.3:20545935-20545954 None:intergenic 35.0%
!! TTTTTATGGTATTGAGGTGG+TGG - chr5.3:20546413-20546432 None:intergenic 35.0%
AAGAGAAAGGGATGATTGTG+GGG + chr5.3:20546679-20546698 MS.gene069127:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG - chr5.3:20546994-20547013 None:intergenic 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5.3:20546352-20546371 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5.3:20546354-20546373 None:intergenic 40.0%
CATGGGAAGATTAACACATG+TGG - chr5.3:20544168-20544187 None:intergenic 40.0%
GAAGGGACTACTAAAGAGAA+AGG + chr5.3:20546666-20546685 MS.gene069127:CDS 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5.3:20546353-20546372 None:intergenic 40.0%
TATTGAAGGAGCTTGAGGAA+GGG + chr5.3:20546649-20546668 MS.gene069127:CDS 40.0%
TCAAACTAATGAGTCGGTTG+TGG - chr5.3:20544284-20544303 None:intergenic 40.0%
TCTCAGCAATGCGAAGAAAA+AGG + chr5.3:20545404-20545423 MS.gene069127:intron 40.0%
TGAGTGAGGTTTGGAGAATT+GGG + chr5.3:20546853-20546872 MS.gene069127:CDS 40.0%
TGCGAAGAAAAAGGAGAGAA+AGG + chr5.3:20545413-20545432 MS.gene069127:intron 40.0%
TGGATAAAACCTGCATGACA+TGG + chr5.3:20546469-20546488 MS.gene069127:CDS 40.0%
TGTAGAGATCTACCACGTTT+CGG + chr5.3:20546219-20546238 MS.gene069127:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG - chr5.3:20546711-20546730 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG - chr5.3:20547008-20547027 None:intergenic 40.0%
! ACTTTGGAGAGTGTGATTTG+TGG + chr5.3:20546774-20546793 MS.gene069127:CDS 40.0%
! GTGCCTTTTTGACACATAGT+GGG + chr5.3:20546742-20546761 MS.gene069127:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG + chr5.3:20546990-20547009 MS.gene069127:CDS 40.0%
!! ACTGATTTGGCTCATGAGTT+TGG + chr5.3:20544519-20544538 MS.gene069127:CDS 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5.3:20547018-20547037 None:intergenic 40.0%
!! CAAAATAAGGAGAAGCATCC+TGG + chr5.3:20544369-20544388 MS.gene069127:CDS 40.0%
!! CTGATTTGGCTCATGAGTTT+GGG + chr5.3:20544520-20544539 MS.gene069127:CDS 40.0%
!! GAGAATTGGGTTGGATATGA+AGG + chr5.3:20546866-20546885 MS.gene069127:CDS 40.0%
!! GCTTGAGCATTGAGTTTACA+TGG - chr5.3:20544203-20544222 None:intergenic 40.0%
!! TGCTATTGAAATGGCGGATT+TGG + chr5.3:20546965-20546984 MS.gene069127:CDS 40.0%
!! TTGTTTGTTGTACCGAAACG+TGG - chr5.3:20546234-20546253 None:intergenic 40.0%
!!! ACGACCAAGGTTTTGAATTG+TGG - chr5.3:20546086-20546105 None:intergenic 40.0%
AGGACTATTGAAGGAGCTTG+AGG + chr5.3:20546644-20546663 MS.gene069127:CDS 45.0%
CATAAGAAACGTGCCAGTCA+TGG + chr5.3:20546182-20546201 MS.gene069127:CDS 45.0%
CATGAGCCAAATCAGTAGCA+AGG - chr5.3:20544515-20544534 None:intergenic 45.0%
CCACCCACTATGTGTCAAAA+AGG - chr5.3:20546748-20546767 None:intergenic 45.0%
CGAAGTATGTTCTCCATGAC+TGG - chr5.3:20546198-20546217 None:intergenic 45.0%
CTATTGAAGGAGCTTGAGGA+AGG + chr5.3:20546648-20546667 MS.gene069127:CDS 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5.3:20546383-20546402 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5.3:20546384-20546403 None:intergenic 45.0%
GGGGACTTGAAGACGAATTT+GGG - chr5.3:20546364-20546383 None:intergenic 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5.3:20546844-20546863 MS.gene069127:CDS 45.0%
GTCCCCAAACTCTACACTAT+TGG + chr5.3:20546378-20546397 MS.gene069127:CDS 45.0%
GTGAGTGAGGTTTGGAGAAT+TGG + chr5.3:20546852-20546871 MS.gene069127:CDS 45.0%
TCATTGCACTCCAAGAGCTT+GGG - chr5.3:20544606-20544625 None:intergenic 45.0%
TGAGGTTTGGAGAATTGGGT+TGG + chr5.3:20546857-20546876 MS.gene069127:CDS 45.0%
TGCAATGAGCTTCCCATTAG+AGG + chr5.3:20544618-20544637 MS.gene069127:CDS 45.0%
TGGGGACTTGAAGACGAATT+TGG - chr5.3:20546365-20546384 None:intergenic 45.0%
TGTGGACGTACTCAGTGTTT+AGG - chr5.3:20544266-20544285 None:intergenic 45.0%
TTTCTGTATGCCCAAGCTCT+TGG + chr5.3:20544593-20544612 MS.gene069127:CDS 45.0%
! GGTGCCTTTTTGACACATAG+TGG + chr5.3:20546741-20546760 MS.gene069127:CDS 45.0%
! GTGGAGTGCCTATGATATGT+TGG + chr5.3:20546793-20546812 MS.gene069127:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG + chr5.3:20546758-20546777 MS.gene069127:CDS 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5.3:20544506-20544525 MS.gene069127:CDS 45.0%
!! AAGGAGAAGCATCCTGGATT+TGG + chr5.3:20544375-20544394 MS.gene069127:CDS 45.0%
!! CCTTTTTGACACATAGTGGG+TGG + chr5.3:20546745-20546764 MS.gene069127:CDS 45.0%
AGAAAGGGATGATTGTGGGG+TGG + chr5.3:20546682-20546701 MS.gene069127:CDS 50.0%
AGAATCGAGCCATGTCATGC+AGG - chr5.3:20546481-20546500 None:intergenic 50.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5.3:20544177-20544196 MS.gene069127:CDS 50.0%
CTCATTGCACTCCAAGAGCT+TGG - chr5.3:20544607-20544626 None:intergenic 50.0%
GAAAGGGATGATTGTGGGGT+GGG + chr5.3:20546683-20546702 MS.gene069127:CDS 50.0%
GGGGCCAATAGTGTAGAGTT+TGG - chr5.3:20546385-20546404 None:intergenic 50.0%
GTGGGTGATTAGGCCAAACA+TGG + chr5.3:20546611-20546630 MS.gene069127:CDS 50.0%
! GGTATTGAGGTGGTGGTGAA+GGG - chr5.3:20546406-20546425 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+GGG - chr5.3:20546405-20546424 None:intergenic 50.0%
! TATTGAGGTGGTGGTGAAGG+GGG - chr5.3:20546404-20546423 None:intergenic 50.0%
! TGGTATTGAGGTGGTGGTGA+AGG - chr5.3:20546407-20546426 None:intergenic 50.0%
!! GAGTTTACATGGCCTTGTGC+TGG - chr5.3:20544192-20544211 None:intergenic 50.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5.3:20544186-20544205 None:intergenic 55.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5.3:20544185-20544204 None:intergenic 55.0%
AACGCGAGAGGCCCTTGTGA+TGG - chr5.3:20545532-20545551 None:intergenic 60.0%
! CTGTTGGTGCTTGTGCCGTC+TGG + chr5.3:20544565-20544584 MS.gene069127:CDS 60.0%
! TGTGGGGTGGGTTCCACAAG+AGG + chr5.3:20546695-20546714 MS.gene069127:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 20544156 20547070 20544156 ID=MS.gene069127
chr5.3 mRNA 20544156 20547070 20544156 ID=MS.gene069127.t1;Parent=MS.gene069127
chr5.3 exon 20544156 20544639 20544156 ID=MS.gene069127.t1.exon1;Parent=MS.gene069127.t1
chr5.3 CDS 20544156 20544639 20544156 ID=cds.MS.gene069127.t1;Parent=MS.gene069127.t1
chr5.3 exon 20546160 20547070 20546160 ID=MS.gene069127.t1.exon2;Parent=MS.gene069127.t1
chr5.3 CDS 20546160 20547070 20546160 ID=cds.MS.gene069127.t1;Parent=MS.gene069127.t1
Gene Sequence

>MS.gene069127

ATGGAAACACCACATGTGTTAATCTTCCCATGTCCAGCACAAGGCCATGTAAACTCAATGCTCAAGCTAGCTGAACTTCTTGCAATTCAAAATCTTCACATAACATTCCTAAACACTGAGTACGTCCACAACCGACTCATTAGTTTGAATGATGATATTCAAGCTCTTTTAGAATGTTACCCTAAGCTTCAATTCAAGACCATCTCTGATTTTCAAAATAAGGAGAAGCATCCTGGATTTGGAGAAAACATTGTAGATGTAATTTCCTCCATAAATATGTATGGTAAGCCTTCTTTAAGAGATATTATTGTCTCTGAGAAAGTAAGTTGCATTATTTTAGATGGAGGTTTTGGTGACCTTGCTACTGATTTGGCTCATGAGTTTGGGATACAATTGATACATTTTCGTACTGTTGGTGCTTGTGCCGTCTGGACTTTTTTCTGTATGCCCAAGCTCTTGGAGTGCAATGAGCTTCCCATTAGAGGTATATTATATAATACTCCATCCGATCTTATTTATAAAAGAAAATTGATTCAATAAAAGTTAATGTATCTAGTCTAACTTTTTAACTAGATATATTAATTTTTATTGACCTAAATGTCTTTTACAAATATAAACGAAAGGAATATAATATACTCACTCTCAATCTGCTCTTAGAATTTTAGTTATATTTTTTTTCTTCTTCTTTTTAATTTCCCCTAATTTCTTGATTTAATTATTATACATATGCAAATGCAAGGTCAAAGTATATAATATGTGCCGTCTCAAACTGCTTTTAGAGTTTTTGGCTTAATTAGTGTTTAGCTTATTTTGATACATATTGCTCTTAGAGTTTTCTAAGTGCCTCATTTTATTTAAACTTATCTTTGATTTTACGAGAAAGGTTAGAAACACTATCTTTTTAACATTTGTTTAATACTCACTATCTTATTGGGTAATCTATATGGATTTCACTACTTTATGTTAGATCTATTTCTAAAGTATGAGACCCACATAAGTTTTATCCAATAAAAGAATATGTGTTTGAGAGAGTGCTCATAATAAATTGTTCATAGCTAACGCTCCTCTTATTTTATACACCTATCTTTTTTCTTTTTACTTAGTCTTTGTTTGTTTCGAGAGAAATAGAGAAGAGAGAAATAGGGGAGAGAGAAGTTGAGAAGAGATAGTGACTTTCTTTTGTTTGGTTCAGGAGAGAAATTGAAGAGAGAGAAATTGAAGGGATCAAATTTCAACTTTTTACTTTCTTCTCAGCAATGCGAAGAAAAAGGAGAGAAAGGTTGACTAGTGCTATAATTACGATATTGTCCATGTTTTCATAGTTTATTTGCTGTACAATCACAAGTGCCTCTCACGTTTTAATATTTTTTGTACCATCACAAGGGCCTCTCGCGTTTTAATATTTTTTTTACTATGTTACCTATTAGTTTTTTGATTTTTGTGGTGCTGCTATGTTCGTTATTTAGTTAAAAGCTAATGACATTTTTTTTTCTTCAGAATAACAATTATTTTAAAACTCAAGATTCATAGTTTTTTTTTACAAGAGATTCCCAATTTCTATTAAAGAGCGATAACAATATAACAATATATTTAGTTTTATAAAAAGAATAATAGATTTACAAAAAGTAAATTTAAATTTCACAAAAAGATATTTTTAAAGTTGAAGTATAATTAAGATTATATATATTTTTGTGAAGGGGCATATTGGTCAATTCAAATTGTTATTACATTTCTCTCTTCTCTATTTCTCTTCTATCTCTCGTCTACCAAACAATACCTCAAATCCATCACATTTCTCACATCTTTCTCTCTTCTCAATCTCTCTCTCTCACCTATTTCTCTCTTTACAACTTCTCTTGACAACCAAACACACCCAATAAACTTATCTACTATTACTCCTTCAAAAAAACTTATCTACTATTACATACCACAATTCAAAACCTTGGTCGTATATTTATGCAAATAATATGAGTTATACGTGTGTTCTCGTTGTTTAATTTATAGGAGACAAGGACATGGATCGCATCATAAGAAACGTGCCAGTCATGGAGAACATACTTCGATGTAGAGATCTACCACGTTTCGGTACAACAAACAAAGAGGACCATATCGTTTTAGATAAAGTTTTACAACTAACCCAACTATCGCTTAAAGTCAATGCATTAATACTCAACACATTTGAAGATCTAGAGTCCCCAATTCTCTCCCAAATTCGTCTTCAAGTCCCCAAACTCTACACTATTGGCCCCCTTCACCACCACCTCAATACCATAAAAAAAACAACATCATCTTTCAACTGCAATTTCTTCAAAGTGGATAAAACCTGCATGACATGGCTCGATTCTCAACCATCAAAATCAGTTGTATATGTCAGCTTTGGCAGTATCACTACAATGACAAGAGAACAAATACTTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACGATTTTTGTGGGTGATTAGGCCAAACATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGATTTGTGGAGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAGAATTGGGTTGGATATGAAGGATGTTTGTGATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGACGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTACTAGCCCATAA

Protein sequence

>MS.gene069127.t1

METPHVLIFPCPAQGHVNSMLKLAELLAIQNLHITFLNTEYVHNRLISLNDDIQALLECYPKLQFKTISDFQNKEKHPGFGENIVDVISSINMYGKPSLRDIIVSEKVSCIILDGGFGDLATDLAHEFGIQLIHFRTVGACAVWTFFCMPKLLECNELPIRGDKDMDRIIRNVPVMENILRCRDLPRFGTTNKEDHIVLDKVLQLTQLSLKVNALILNTFEDLESPILSQIRLQVPKLYTIGPLHHHLNTIKKTTSSFNCNFFKVDKTCMTWLDSQPSKSVVYVSFGSITTMTREQILEIWHGLLNSKKRFLWVIRPNMVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVICGVPMICWPYFADQQINSRFVSEVWRIGLDMKDVCDRNVVEKMVNDIMTNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQNLIQYIRSTSP