Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069299.t1 | XP_003598417.1 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 1.00E-222 | 782.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069299.t1 | Q8L518 | 68.5 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 7.0e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069299.t1 | G7IVT5 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 7.2e-223 | 782.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene069299 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene051122 | MS.gene069299 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene059710 | MS.gene069299 | 0.803567 | 3.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069299 | MS.gene019492 | PPI |
| MS.gene069299 | MS.gene36871 | PPI |
| MS.gene069299 | MS.gene067354 | PPI |
| MS.gene069299 | MS.gene83346 | PPI |
| MS.gene069299 | MS.gene27633 | PPI |
| MS.gene069299 | MS.gene50958 | PPI |
| MS.gene069299 | MS.gene52160 | PPI |
| MS.gene069299 | MS.gene045848 | PPI |
| MS.gene069299 | MS.gene038844 | PPI |
| MS.gene57514 | MS.gene069299 | PPI |
| MS.gene42220 | MS.gene069299 | PPI |
| MS.gene069299 | MS.gene58299 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069299.t1 | MTR_3g013430 | 98.000 | 500 | 10 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1016 |
| MS.gene069299.t1 | MTR_8g041330 | 72.051 | 390 | 106 | 1 | 113 | 499 | 19 | 408 | 0.0 | 585 |
| MS.gene069299.t1 | MTR_6g039820 | 66.667 | 327 | 108 | 1 | 128 | 453 | 17 | 343 | 1.38e-168 | 479 |
| MS.gene069299.t1 | MTR_1g097850 | 62.259 | 363 | 121 | 3 | 113 | 473 | 2 | 350 | 1.48e-166 | 474 |
| MS.gene069299.t1 | MTR_1g097850 | 64.122 | 262 | 79 | 2 | 113 | 373 | 2 | 249 | 2.04e-119 | 351 |
| MS.gene069299.t1 | MTR_6g040230 | 66.239 | 234 | 77 | 1 | 220 | 453 | 265 | 496 | 2.41e-112 | 342 |
| MS.gene069299.t1 | MTR_2g054370 | 35.312 | 320 | 192 | 5 | 140 | 453 | 56 | 366 | 4.95e-55 | 189 |
| MS.gene069299.t1 | MTR_8g041220 | 74.118 | 85 | 22 | 0 | 356 | 440 | 47 | 131 | 2.86e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069299.t1 | AT1G74320 | 68.529 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 3.37e-180 | 509 |
| MS.gene069299.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 5.82e-158 | 452 |
| MS.gene069299.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 5.82e-158 | 452 |
| MS.gene069299.t1 | AT1G71697 | 62.310 | 329 | 122 | 2 | 126 | 452 | 16 | 344 | 3.33e-156 | 448 |
| MS.gene069299.t1 | AT4G09760 | 58.294 | 211 | 85 | 3 | 126 | 334 | 14 | 223 | 5.24e-85 | 263 |
| MS.gene069299.t1 | AT4G09760 | 56.633 | 196 | 82 | 3 | 126 | 319 | 14 | 208 | 3.61e-75 | 236 |
| MS.gene069299.t1 | AT2G26830 | 36.254 | 331 | 192 | 6 | 131 | 453 | 45 | 364 | 8.00e-60 | 201 |
Find 110 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACAAGGAAATCTCTATTT+TGG | 0.136724 | 3.3:+8393935 | MS.gene069299:CDS |
| CCACCTGCTTGATTGCTTAT+AGG | 0.171347 | 3.3:-8392759 | None:intergenic |
| CGGTCAGCTTTGCTGCTTAC+AGG | 0.183900 | 3.3:-8393023 | None:intergenic |
| CAGGAAGATGAAGAGAGTTT+TGG | 0.228691 | 3.3:+8396929 | MS.gene069299:CDS |
| TGATATCATTAGCAGGTAAA+TGG | 0.242873 | 3.3:+8393072 | MS.gene069299:CDS |
| ATCATGGAACTCCTTCATTT+TGG | 0.268402 | 3.3:-8393678 | None:intergenic |
| TGCCACAATGATTTGCAATA+TGG | 0.280053 | 3.3:+8393996 | MS.gene069299:CDS |
| GTAGGAGTCGCCTGGTTTAC+AGG | 0.321895 | 3.3:-8392726 | None:intergenic |
| ACCAGAGTTCTTCGATCCTT+TGG | 0.330585 | 3.3:-8396901 | None:intergenic |
| GTACCCTCAGGGTTATTAAA+AGG | 0.333817 | 3.3:-8396736 | None:intergenic |
| ACTAGATGCAAATGCGTTAC+AGG | 0.349443 | 3.3:+8393103 | MS.gene069299:CDS |
| CAAAGAGAAACTCACTATTA+TGG | 0.357350 | 3.3:-8394054 | None:intergenic |
| AGAATCTCCTTTGCTTCTGC+TGG | 0.358458 | 3.3:-8393050 | None:intergenic |
| GGGCCTTTGGGGAATAATTT+CGG | 0.370418 | 3.3:+8395693 | MS.gene069299:CDS |
| AGGAGCGTGAAAGATTTGTT+AGG | 0.370918 | 3.3:+8395319 | MS.gene069299:CDS |
| CCACCTAAAGTGTCATTTAC+GGG | 0.371609 | 3.3:-8392834 | None:intergenic |
| ACAGAGGTTTCAAGAGTATT+GGG | 0.371611 | 3.3:+8396675 | MS.gene069299:CDS |
| GTGAAAAGAAAGCCAATCTT+TGG | 0.373883 | 3.3:+8393714 | MS.gene069299:CDS |
| CCTCACGAAAGGTTCTTGTT+AGG | 0.384064 | 3.3:+8393195 | MS.gene069299:CDS |
| CGAAGAACTCTGGTATCTTC+AGG | 0.394810 | 3.3:+8396910 | MS.gene069299:CDS |
| ACAGGGGTTTCAATGGCATC+TGG | 0.397243 | 3.3:-8393005 | None:intergenic |
| GGCAGCTATAAGAGCAGAAA+TGG | 0.397416 | 3.3:-8393657 | None:intergenic |
| AACAGAGGTTTCAAGAGTAT+TGG | 0.403796 | 3.3:+8396674 | MS.gene069299:CDS |
| AAGGTTCTTGTTAGGATCTA+CGG | 0.422916 | 3.3:+8393203 | MS.gene069299:CDS |
| ACCACCTAAAGTGTCATTTA+CGG | 0.432131 | 3.3:-8392835 | None:intergenic |
| CACCAGGCATATCTAGATCA+TGG | 0.437311 | 3.3:-8393694 | None:intergenic |
| ACTTCTCAACTTCTTGTAGT+AGG | 0.438883 | 3.3:-8395645 | None:intergenic |
| GGTCAGGGGCCTCGTCTACT+AGG | 0.440821 | 3.3:+8393293 | MS.gene069299:CDS |
| GCATCAGAGCTTAGAAGATA+AGG | 0.442159 | 3.3:-8396706 | None:intergenic |
| GCTGCTTACAGGGGTTTCAA+TGG | 0.448428 | 3.3:-8393012 | None:intergenic |
| GATATCATTAGCAGGTAAAT+GGG | 0.461907 | 3.3:+8393073 | MS.gene069299:CDS |
| GATTCTTCCGCAATGGGTGC+AGG | 0.463434 | 3.3:+8392663 | None:intergenic |
| GGTCAGCTTTGCTGCTTACA+GGG | 0.464141 | 3.3:-8393022 | None:intergenic |
| AGGTTCTTGTTAGGATCTAC+GGG | 0.464881 | 3.3:+8393204 | MS.gene069299:CDS |
| CCTCAATGTAGGCCAAAGAT+TGG | 0.466655 | 3.3:-8393726 | None:intergenic |
| TTTAATAACCCTGAGGGTAC+AGG | 0.469258 | 3.3:+8396739 | MS.gene069299:CDS |
| GTACATGTCAAAGAATGGTC+AGG | 0.485242 | 3.3:+8393277 | MS.gene069299:CDS |
| CACAATTGAATTTGACTACA+AGG | 0.487535 | 3.3:+8396642 | MS.gene069299:CDS |
| TTGCTATAATCAAGAATATG+AGG | 0.491630 | 3.3:-8395197 | None:intergenic |
| GAATATGAGGCGTTTCTGTA+TGG | 0.492535 | 3.3:-8395184 | None:intergenic |
| GAGGTTTCCTCAGTTGTAGC+TGG | 0.492695 | 3.3:-8393176 | None:intergenic |
| TAGGATCTACGGGGAGGGTG+TGG | 0.493067 | 3.3:+8393214 | MS.gene069299:CDS |
| GCGTCTGCAGCGCATGCCAA+AGG | 0.493926 | 3.3:+8396885 | MS.gene069299:CDS |
| AATGATACAGCAGGTGATGA+TGG | 0.495476 | 3.3:+8392906 | MS.gene069299:CDS |
| GGAGCGTGAAAGATTTGTTA+GGG | 0.498076 | 3.3:+8395320 | MS.gene069299:CDS |
| TGCTCCACTTCACTCTCACT+TGG | 0.498911 | 3.3:-8395622 | None:intergenic |
| TTGATAGGGATGATGAAATA+CGG | 0.500021 | 3.3:+8393246 | MS.gene069299:CDS |
| TTTGTCTTCTCCAAAAGAAG+TGG | 0.502871 | 3.3:+8393890 | MS.gene069299:CDS |
| TCAGGCTCGCATCAACGGAT+AGG | 0.503411 | 3.3:+8393969 | MS.gene069299:CDS |
| AGGGCATATTTGAAGACCTC+AGG | 0.504968 | 3.3:+8395339 | MS.gene069299:CDS |
| CTTGATTATAGCAAATATCC+TGG | 0.508261 | 3.3:+8395206 | MS.gene069299:CDS |
| ATGAGGTATTTGAAATAAAG+TGG | 0.508683 | 3.3:+8393153 | MS.gene069299:CDS |
| AATCAAATACCTGTACCCTC+AGG | 0.510529 | 3.3:-8396748 | None:intergenic |
| CCAATCTTTGGCCTACATTG+AGG | 0.512237 | 3.3:+8393726 | MS.gene069299:CDS |
| CAGGCTCGCATCAACGGATA+GGG | 0.520005 | 3.3:+8393970 | MS.gene069299:CDS |
| TCGCAGCCATCTCACAAAAG+TGG | 0.525991 | 3.3:-8395157 | None:intergenic |
| AACCCCGTAAATGACACTTT+AGG | 0.528458 | 3.3:+8392831 | MS.gene069299:CDS |
| TTTGCTATATCATACGCTAC+AGG | 0.530263 | 3.3:-8395134 | None:intergenic |
| TTTGAGTACATGTCAAAGAA+TGG | 0.530571 | 3.3:+8393272 | MS.gene069299:CDS |
| TCTTATAGCTGCCAAAATGA+AGG | 0.531214 | 3.3:+8393667 | MS.gene069299:CDS |
| AGCTGTCAGGCTCGCATCAA+CGG | 0.536968 | 3.3:+8393964 | MS.gene069299:CDS |
| TGAAGAGTTTATACATGCAC+GGG | 0.537689 | 3.3:+8393337 | MS.gene069299:CDS |
| TTATGTACATACCTCAATGT+AGG | 0.540731 | 3.3:-8393737 | None:intergenic |
| CTTGTTAGGATCTACGGGGA+GGG | 0.546574 | 3.3:+8393209 | MS.gene069299:CDS |
| TCTCCTTTGCTTCTGCTGGA+AGG | 0.547716 | 3.3:-8393046 | None:intergenic |
| GAGATTCTGATATCATTAGC+AGG | 0.548741 | 3.3:+8393065 | MS.gene069299:CDS |
| GCAGGTGATGATGGAAAAGA+AGG | 0.548923 | 3.3:+8392915 | MS.gene069299:CDS |
| CACTATTATGGTCACAGAGT+TGG | 0.554152 | 3.3:-8394042 | None:intergenic |
| TTACAGGTGATCCCTCTCAA+GGG | 0.554414 | 3.3:+8393119 | MS.gene069299:CDS |
| TTGAAGAGTTTATACATGCA+CGG | 0.561716 | 3.3:+8393336 | MS.gene069299:CDS |
| TTTCTGTAGTAGGAGTCGCC+TGG | 0.566230 | 3.3:-8392734 | None:intergenic |
| TACATGTCAAAGAATGGTCA+GGG | 0.568152 | 3.3:+8393278 | MS.gene069299:CDS |
| TTCCATGATCTAGATATGCC+TGG | 0.568317 | 3.3:+8393692 | MS.gene069299:CDS |
| GCCAAAGGATCGAAGAACTC+TGG | 0.572715 | 3.3:+8396900 | MS.gene069299:CDS |
| TGCTGAGAATCCTGTAAACC+AGG | 0.576627 | 3.3:+8392716 | MS.gene069299:CDS |
| ATCAAATACCTGTACCCTCA+GGG | 0.578244 | 3.3:-8396747 | None:intergenic |
| GCTATAAGAGCAGAAATGGA+TGG | 0.579204 | 3.3:-8393653 | None:intergenic |
| CCGCCTTCCAGCAGAAGCAA+AGG | 0.580944 | 3.3:+8393043 | MS.gene069299:CDS |
| AGAACCAAGTGAGAGTGAAG+TGG | 0.582495 | 3.3:+8395618 | MS.gene069299:CDS |
| CACCTAAAGTGTCATTTACG+GGG | 0.582742 | 3.3:-8392833 | None:intergenic |
| GGTTCTCTTGACAGACGTTG+AGG | 0.584712 | 3.3:+8395299 | MS.gene069299:intron |
| AATTCTACAAATGATACAGC+AGG | 0.584713 | 3.3:+8392897 | MS.gene069299:CDS |
| CCTATAAGCAATCAAGCAGG+TGG | 0.589660 | 3.3:+8392759 | MS.gene069299:CDS |
| AAAGTGGCCAGCTACAACTG+AGG | 0.589696 | 3.3:+8393169 | MS.gene069299:CDS |
| GTTACAGGTGATCCCTCTCA+AGG | 0.595301 | 3.3:+8393118 | MS.gene069299:CDS |
| GTCAGCTTTGCTGCTTACAG+GGG | 0.606553 | 3.3:-8393021 | None:intergenic |
| TCAGGGTTATTAAAAGGAGA+AGG | 0.608507 | 3.3:-8396730 | None:intergenic |
| TATAAGCAATCAAGCAGGTG+GGG | 0.609550 | 3.3:+8392761 | MS.gene069299:CDS |
| TACCATATTGCAAATCATTG+TGG | 0.610437 | 3.3:-8393998 | None:intergenic |
| CTTCAGAAATTGGCTTAGTG+AGG | 0.612289 | 3.3:+8393860 | MS.gene069299:intron |
| AACTGAGGAAACCTCACGAA+AGG | 0.614934 | 3.3:+8393184 | MS.gene069299:CDS |
| CCTTTGCTTCTGCTGGAAGG+CGG | 0.617396 | 3.3:-8393043 | None:intergenic |
| TTATTTGGACACGGTCGACA+AGG | 0.618896 | 3.3:+8393920 | MS.gene069299:CDS |
| GTTGCAAAAGACCAAGCAGT+TGG | 0.619982 | 3.3:+8392801 | MS.gene069299:CDS |
| AATCCTATAAGCAATCAAGC+AGG | 0.622217 | 3.3:+8392756 | MS.gene069299:CDS |
| TACAGGTGATCCCTCTCAAG+GGG | 0.630983 | 3.3:+8393120 | MS.gene069299:CDS |
| CTATAAGCAATCAAGCAGGT+GGG | 0.632457 | 3.3:+8392760 | MS.gene069299:CDS |
| GGTGCTATGAAAGACAAAGC+AGG | 0.639091 | 3.3:+8392936 | MS.gene069299:CDS |
| CCCGTAAATGACACTTTAGG+TGG | 0.644090 | 3.3:+8392834 | MS.gene069299:CDS |
| CCTAACAAGAACCTTTCGTG+AGG | 0.644921 | 3.3:-8393195 | None:intergenic |
| TCTTGTTAGGATCTACGGGG+AGG | 0.648442 | 3.3:+8393208 | MS.gene069299:CDS |
| GGTTTCAAGAGTATTGGGCA+AGG | 0.650192 | 3.3:+8396680 | MS.gene069299:CDS |
| ATCATTAGCAGGTAAATGGG+AGG | 0.658690 | 3.3:+8393076 | MS.gene069299:CDS |
| ATACCGAAATTATTCCCCAA+AGG | 0.681258 | 3.3:-8395696 | None:intergenic |
| GCAGGTGAAGATGACAAACA+AGG | 0.687986 | 3.3:+8392954 | MS.gene069299:CDS |
| GTAAAACGTCCTAGTAGACG+AGG | 0.694555 | 3.3:-8393302 | None:intergenic |
| ACAAGGAGTATGCGAAACAG+AGG | 0.696997 | 3.3:+8396659 | MS.gene069299:CDS |
| ACATGTCAAAGAATGGTCAG+GGG | 0.725728 | 3.3:+8393279 | MS.gene069299:CDS |
| ACAGGTGATCCCTCTCAAGG+GGG | 0.737784 | 3.3:+8393121 | MS.gene069299:CDS |
| GGTTCTTGTTAGGATCTACG+GGG | 0.808372 | 3.3:+8393205 | MS.gene069299:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTAAAAAAAATGAAAAAA+GGG | + | chr3.3:8394477-8394496 | MS.gene069299:intron | 10.0% |
| !! | TTTGTAAAAAAAATGAAAAA+AGG | + | chr3.3:8394476-8394495 | MS.gene069299:intron | 10.0% |
| !!! | ATATATAAATTATTGTTTTC+AGG | + | chr3.3:8396855-8396874 | MS.gene069299:intron | 10.0% |
| !!! | TGTTCTTTTTTTTTTTTTTT+GGG | + | chr3.3:8395395-8395414 | MS.gene069299:intron | 10.0% |
| !!! | TTGTTCTTTTTTTTTTTTTT+TGG | + | chr3.3:8395394-8395413 | MS.gene069299:intron | 10.0% |
| !! | ACATTAAATCATAAGATATT+TGG | - | chr3.3:8395076-8395095 | None:intergenic | 15.0% |
| !! | ATTCATAATTATATGAATGA+TGG | - | chr3.3:8395538-8395557 | None:intergenic | 15.0% |
| !! | GTTGCAAAAATAAAAATAAA+AGG | - | chr3.3:8395940-8395959 | None:intergenic | 15.0% |
| !!! | AAGTTTCTAGAAAATTATTT+TGG | + | chr3.3:8396302-8396321 | MS.gene069299:intron | 15.0% |
| !!! | AATTTTTTTGACAAAACAAA+AGG | - | chr3.3:8394325-8394344 | None:intergenic | 15.0% |
| !!! | ACATTTTTTACTTTTAAAAC+AGG | - | chr3.3:8394583-8394602 | None:intergenic | 15.0% |
| !!! | AGTTTCTAGAAAATTATTTT+GGG | + | chr3.3:8396303-8396322 | MS.gene069299:intron | 15.0% |
| !!! | ATTTTTTTGACAAAACAAAA+GGG | - | chr3.3:8394324-8394343 | None:intergenic | 15.0% |
| !!! | CATTTTTTACTTTTAAAACA+GGG | - | chr3.3:8394582-8394601 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATTTTAAATGTT+TGG | + | chr3.3:8396531-8396550 | MS.gene069299:intron | 15.0% |
| !!! | TTTAAAATTGTGTACATATT+GGG | + | chr3.3:8394871-8394890 | MS.gene069299:intron | 15.0% |
| !!! | TTTATAATGCATCAATTTTA+TGG | - | chr3.3:8393456-8393475 | None:intergenic | 15.0% |
| !!! | TTTTAAAATTGTGTACATAT+TGG | + | chr3.3:8394870-8394889 | MS.gene069299:intron | 15.0% |
| !! | AAAAAAATTGTCAACGAAAA+AGG | - | chr3.3:8394354-8394373 | None:intergenic | 20.0% |
| !! | AATATGAATTAACCATAAGT+GGG | + | chr3.3:8396468-8396487 | MS.gene069299:intron | 20.0% |
| !! | ATAAACCTTATCTGTATTTA+TGG | + | chr3.3:8394734-8394753 | MS.gene069299:intron | 20.0% |
| !! | CAAAAATAAAAATAAAAGGC+GGG | - | chr3.3:8395936-8395955 | None:intergenic | 20.0% |
| !! | GCAAAAATAAAAATAAAAGG+CGG | - | chr3.3:8395937-8395956 | None:intergenic | 20.0% |
| !! | TCAATGAACAAATAAAACAA+AGG | - | chr3.3:8394962-8394981 | None:intergenic | 20.0% |
| !!! | AACATTTTTGTCAGTAAAAA+GGG | - | chr3.3:8394298-8394317 | None:intergenic | 20.0% |
| !!! | AATTTTCTAGAAACTTAGAA+GGG | - | chr3.3:8396298-8396317 | None:intergenic | 20.0% |
| !!! | AGAAATGTATTTTATCTTGT+TGG | + | chr3.3:8395905-8395924 | MS.gene069299:intron | 20.0% |
| !!! | ATTATATAATTAGTCTGCAA+AGG | - | chr3.3:8394116-8394135 | None:intergenic | 20.0% |
| !!! | GAATGATGATTCTTTATTTT+TGG | - | chr3.3:8394710-8394729 | None:intergenic | 20.0% |
| !!! | TAACATTTTTGTCAGTAAAA+AGG | - | chr3.3:8394299-8394318 | None:intergenic | 20.0% |
| !!! | TAATTTTCTAGAAACTTAGA+AGG | - | chr3.3:8396299-8396318 | None:intergenic | 20.0% |
| !!! | TGTATCATTTGTAGAATTTT+CGG | - | chr3.3:8392895-8392914 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTAAATGTTTGG+CGG | + | chr3.3:8396534-8396553 | MS.gene069299:intron | 20.0% |
| ! | ACTAGTATCACTTCAAATTT+AGG | + | chr3.3:8393476-8393495 | MS.gene069299:intron | 25.0% |
| ! | AGTTATTTAACAAACACACT+AGG | + | chr3.3:8395801-8395820 | MS.gene069299:intron | 25.0% |
| ! | ATGAACAAATAAAACAAAGG+AGG | - | chr3.3:8394959-8394978 | None:intergenic | 25.0% |
| ! | ATGTGAAAATAATTAGTCAC+AGG | - | chr3.3:8395275-8395294 | None:intergenic | 25.0% |
| ! | ATTATTCTTCTTTGTACTCT+TGG | + | chr3.3:8395747-8395766 | MS.gene069299:intron | 25.0% |
| ! | CATTAAAATACAGAAAACCA+TGG | - | chr3.3:8396086-8396105 | None:intergenic | 25.0% |
| ! | GAATATGAATTAACCATAAG+TGG | + | chr3.3:8396467-8396486 | MS.gene069299:intron | 25.0% |
| ! | TACAAACAAAATTCTTCCAT+AGG | - | chr3.3:8394462-8394481 | None:intergenic | 25.0% |
| ! | TACCTATTATTTCATTTGCA+AGG | - | chr3.3:8396794-8396813 | None:intergenic | 25.0% |
| ! | TATTTCAATGCTTCAGAAAT+TGG | + | chr3.3:8393850-8393869 | MS.gene069299:intron | 25.0% |
| ! | TGGCAAAAAAAAAATAACGA+AGG | - | chr3.3:8395056-8395075 | None:intergenic | 25.0% |
| ! | TTACAAAAGAAATTGCATTG+TGG | - | chr3.3:8396520-8396539 | None:intergenic | 25.0% |
| ! | TTATGAATGACCTTAAGAAA+TGG | + | chr3.3:8395550-8395569 | MS.gene069299:intron | 25.0% |
| ! | TTGCTATAATCAAGAATATG+AGG | - | chr3.3:8395200-8395219 | None:intergenic | 25.0% |
| ! | TTTAATGTTATGTCTGTAAC+AGG | + | chr3.3:8395088-8395107 | MS.gene069299:intron | 25.0% |
| ! | TTTGAGAATTACAAAGGATT+GGG | + | chr3.3:8396329-8396348 | MS.gene069299:intron | 25.0% |
| ! | TTTGTTCCAAATCATGAAAT+AGG | - | chr3.3:8395458-8395477 | None:intergenic | 25.0% |
| !! | ATATGAATGATGGAATACAA+GGG | - | chr3.3:8395528-8395547 | None:intergenic | 25.0% |
| !! | ATGAGGTATTTGAAATAAAG+TGG | + | chr3.3:8393153-8393172 | MS.gene069299:CDS | 25.0% |
| !! | GATAATTATTTCTTCAGAAC+AGG | - | chr3.3:8394161-8394180 | None:intergenic | 25.0% |
| !! | TATATGAATGATGGAATACA+AGG | - | chr3.3:8395529-8395548 | None:intergenic | 25.0% |
| !! | TGTGACTAATTATTTTCACA+TGG | + | chr3.3:8395274-8395293 | MS.gene069299:intron | 25.0% |
| !! | TGTGGAAATTTTCTTTGATA+GGG | + | chr3.3:8393232-8393251 | MS.gene069299:CDS | 25.0% |
| !! | TTTGGAACAAAAAAGTTGTA+TGG | + | chr3.3:8395467-8395486 | MS.gene069299:intron | 25.0% |
| !!! | GATTCTTTATTTTTGGACAA+GGG | - | chr3.3:8394703-8394722 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTCATTGACA+TGG | + | chr3.3:8394964-8394983 | MS.gene069299:intron | 25.0% |
| !!! | TGATTCTTTATTTTTGGACA+AGG | - | chr3.3:8394704-8394723 | None:intergenic | 25.0% |
| !!! | TTTACTTTTAAAACAGGGTA+AGG | - | chr3.3:8394577-8394596 | None:intergenic | 25.0% |
| !!! | TTTTGAGAATTACAAAGGAT+TGG | + | chr3.3:8396328-8396347 | MS.gene069299:intron | 25.0% |
| AACTAACAGTCCATTTCTTA+AGG | - | chr3.3:8395563-8395582 | None:intergenic | 30.0% | |
| AATTCTACAAATGATACAGC+AGG | + | chr3.3:8392897-8392916 | MS.gene069299:CDS | 30.0% | |
| ACGATGAAAATAATTACCTG+AGG | - | chr3.3:8395358-8395377 | None:intergenic | 30.0% | |
| AGTTTCTGTTCCTGATATTA+TGG | + | chr3.3:8395579-8395598 | MS.gene069299:intron | 30.0% | |
| ATAAATTCAGAAGGGAAACA+TGG | - | chr3.3:8393603-8393622 | None:intergenic | 30.0% | |
| ATAGTAAATACCCTGATCAT+TGG | - | chr3.3:8395971-8395990 | None:intergenic | 30.0% | |
| ATATGTTTCCACAATACTGT+TGG | - | chr3.3:8396263-8396282 | None:intergenic | 30.0% | |
| ATCAATGTTGTGTAACTCAA+AGG | - | chr3.3:8394675-8394694 | None:intergenic | 30.0% | |
| ATGAAAAGGAGTCAAAAATC+AGG | - | chr3.3:8396238-8396257 | None:intergenic | 30.0% | |
| CAAAGAGAAACTCACTATTA+TGG | - | chr3.3:8394057-8394076 | None:intergenic | 30.0% | |
| CACAATTGAATTTGACTACA+AGG | + | chr3.3:8396642-8396661 | MS.gene069299:CDS | 30.0% | |
| CTTGATTATAGCAAATATCC+TGG | + | chr3.3:8395206-8395225 | MS.gene069299:CDS | 30.0% | |
| GATATCATTAGCAGGTAAAT+GGG | + | chr3.3:8393073-8393092 | MS.gene069299:CDS | 30.0% | |
| GATTATCCAAACAAATTGCT+TGG | + | chr3.3:8396398-8396417 | MS.gene069299:intron | 30.0% | |
| GTATTCACACACAAAAATGT+TGG | + | chr3.3:8396811-8396830 | MS.gene069299:intron | 30.0% | |
| GTTTCTGTTCCTGATATTAT+GGG | + | chr3.3:8395580-8395599 | MS.gene069299:intron | 30.0% | |
| TACCATATTGCAAATCATTG+TGG | - | chr3.3:8394001-8394020 | None:intergenic | 30.0% | |
| TCAATGTTGTGTAACTCAAA+GGG | - | chr3.3:8394674-8394693 | None:intergenic | 30.0% | |
| TCAGCACTTATCTTTATGTT+GGG | + | chr3.3:8396182-8396201 | MS.gene069299:intron | 30.0% | |
| TGATATCATTAGCAGGTAAA+TGG | + | chr3.3:8393072-8393091 | MS.gene069299:CDS | 30.0% | |
| TGATGACCTATTTCATGATT+TGG | + | chr3.3:8395449-8395468 | MS.gene069299:intron | 30.0% | |
| TGCCTTGCAAATGAAATAAT+AGG | + | chr3.3:8396789-8396808 | MS.gene069299:intron | 30.0% | |
| TTATGTACATACCTCAATGT+AGG | - | chr3.3:8393740-8393759 | None:intergenic | 30.0% | |
| TTCAGCACTTATCTTTATGT+TGG | + | chr3.3:8396181-8396200 | MS.gene069299:intron | 30.0% | |
| TTGAAGAGTTTATACATGCA+CGG | + | chr3.3:8393336-8393355 | MS.gene069299:CDS | 30.0% | |
| TTGAGAATTACAAAGGATTG+GGG | + | chr3.3:8396330-8396349 | MS.gene069299:intron | 30.0% | |
| TTGATAGGGATGATGAAATA+CGG | + | chr3.3:8393246-8393265 | MS.gene069299:CDS | 30.0% | |
| TTTGAGTACATGTCAAAGAA+TGG | + | chr3.3:8393272-8393291 | MS.gene069299:CDS | 30.0% | |
| ! | AAACTACAACCAAGTACTTT+TGG | + | chr3.3:8396557-8396576 | MS.gene069299:intron | 30.0% |
| ! | AATAGTCCAAGCAATTTGTT+TGG | - | chr3.3:8396407-8396426 | None:intergenic | 30.0% |
| ! | ACTAATTATTTTCACATGGC+TGG | + | chr3.3:8395278-8395297 | MS.gene069299:intron | 30.0% |
| ! | AGAAGTGGAAGCTTTTTATT+TGG | + | chr3.3:8393905-8393924 | MS.gene069299:CDS | 30.0% |
| ! | CAAAATTCTTCCATAGGTTT+TGG | - | chr3.3:8394456-8394475 | None:intergenic | 30.0% |
| ! | CTTATAGGATTTTCTGTAGT+AGG | - | chr3.3:8392747-8392766 | None:intergenic | 30.0% |
| ! | GTGTGGAAATTTTCTTTGAT+AGG | + | chr3.3:8393231-8393250 | MS.gene069299:CDS | 30.0% |
| ! | TAAAAAGCTTCCACTTCTTT+TGG | - | chr3.3:8393903-8393922 | None:intergenic | 30.0% |
| ! | TTTTGGTAAAGTTCAGTTGA+AGG | - | chr3.3:8394439-8394458 | None:intergenic | 30.0% |
| !! | ATAAGTGCTGAAGATTCAAT+GGG | - | chr3.3:8396173-8396192 | None:intergenic | 30.0% |
| !! | GGAAATCTCTATTTTGGAAA+AGG | + | chr3.3:8393941-8393960 | MS.gene069299:CDS | 30.0% |
| AAAATGAAAAAAGGGCAACC+CGG | + | chr3.3:8394485-8394504 | MS.gene069299:intron | 35.0% | |
| AACTGTTCAAACCAATGATC+AGG | + | chr3.3:8395957-8395976 | MS.gene069299:intron | 35.0% | |
| AAGGTTCTTGTTAGGATCTA+CGG | + | chr3.3:8393203-8393222 | MS.gene069299:CDS | 35.0% | |
| AATCCTATAAGCAATCAAGC+AGG | + | chr3.3:8392756-8392775 | MS.gene069299:CDS | 35.0% | |
| ACCTTATCTGTATTTATGGC+CGG | + | chr3.3:8394738-8394757 | MS.gene069299:intron | 35.0% | |
| ACTGTTCAAACCAATGATCA+GGG | + | chr3.3:8395958-8395977 | MS.gene069299:intron | 35.0% | |
| ACTTCTCAACTTCTTGTAGT+AGG | - | chr3.3:8395648-8395667 | None:intergenic | 35.0% | |
| AGAAACTTAGAAGGGTAGAA+GGG | - | chr3.3:8396290-8396309 | None:intergenic | 35.0% | |
| AGCGTCTGATAAATTCAGAA+GGG | - | chr3.3:8393611-8393630 | None:intergenic | 35.0% | |
| ATACCGAAATTATTCCCCAA+AGG | - | chr3.3:8395699-8395718 | None:intergenic | 35.0% | |
| ATAGACTGACAAAAGAGAAG+TGG | + | chr3.3:8395846-8395865 | MS.gene069299:intron | 35.0% | |
| ATCTTCTGATTATCTTGCTC+AGG | + | chr3.3:8396609-8396628 | MS.gene069299:intron | 35.0% | |
| CAATACTGTTGGTCATGAAA+AGG | - | chr3.3:8396252-8396271 | None:intergenic | 35.0% | |
| CAATGTTGTGTAACTCAAAG+GGG | - | chr3.3:8394673-8394692 | None:intergenic | 35.0% | |
| CTGAACTTTACCAAAACCTA+TGG | + | chr3.3:8394443-8394462 | MS.gene069299:intron | 35.0% | |
| GAGATTCTGATATCATTAGC+AGG | + | chr3.3:8393065-8393084 | MS.gene069299:CDS | 35.0% | |
| GTGAAAAGAAAGCCAATCTT+TGG | + | chr3.3:8393714-8393733 | MS.gene069299:CDS | 35.0% | |
| TACATGTCAAAGAATGGTCA+GGG | + | chr3.3:8393278-8393297 | MS.gene069299:CDS | 35.0% | |
| TAGAAACTTAGAAGGGTAGA+AGG | - | chr3.3:8396291-8396310 | None:intergenic | 35.0% | |
| TAGTCTGAGAAATGATGTTG+AGG | - | chr3.3:8393827-8393846 | None:intergenic | 35.0% | |
| TCAGGGTTATTAAAAGGAGA+AGG | - | chr3.3:8396733-8396752 | None:intergenic | 35.0% | |
| TCTTATAGCTGCCAAAATGA+AGG | + | chr3.3:8393667-8393686 | MS.gene069299:CDS | 35.0% | |
| TCTTCTGATTATCTTGCTCA+GGG | + | chr3.3:8396610-8396629 | MS.gene069299:intron | 35.0% | |
| TCTTTATGTTGGGTCATTAG+AGG | + | chr3.3:8396192-8396211 | MS.gene069299:intron | 35.0% | |
| TGAAGAGTTTATACATGCAC+GGG | + | chr3.3:8393337-8393356 | MS.gene069299:CDS | 35.0% | |
| TTATGAACCGTAACACTTCA+GGG | - | chr3.3:8393520-8393539 | None:intergenic | 35.0% | |
| TTATTGACCAAGTGTTAGAC+TGG | + | chr3.3:8396370-8396389 | MS.gene069299:intron | 35.0% | |
| TTCTTCTTTGTACTCTTGGA+TGG | + | chr3.3:8395751-8395770 | MS.gene069299:intron | 35.0% | |
| TTTATGAACCGTAACACTTC+AGG | - | chr3.3:8393521-8393540 | None:intergenic | 35.0% | |
| TTTCATGACCAACAGTATTG+TGG | + | chr3.3:8396252-8396271 | MS.gene069299:intron | 35.0% | |
| TTTGTCTTCTCCAAAAGAAG+TGG | + | chr3.3:8393890-8393909 | MS.gene069299:CDS | 35.0% | |
| ! | AACAGAGGTTTCAAGAGTAT+TGG | + | chr3.3:8396674-8396693 | MS.gene069299:CDS | 35.0% |
| ! | AACTGATTCACTCAGTCATT+TGG | + | chr3.3:8395001-8395020 | MS.gene069299:intron | 35.0% |
| ! | ACTCGCAAATCATCTTTTCT+GGG | + | chr3.3:8395672-8395691 | MS.gene069299:CDS | 35.0% |
| ! | AGGAAGATGAAGAGAGTTTT+GGG | + | chr3.3:8396930-8396949 | MS.gene069299:CDS | 35.0% |
| ! | ATCAGGGTATTTACTATTCG+TGG | + | chr3.3:8395974-8395993 | MS.gene069299:intron | 35.0% |
| ! | ATCATGGAACTCCTTCATTT+TGG | - | chr3.3:8393681-8393700 | None:intergenic | 35.0% |
| ! | CGACAAGGAAATCTCTATTT+TGG | + | chr3.3:8393935-8393954 | MS.gene069299:CDS | 35.0% |
| ! | CTACTAGGACGTTTTACAAA+TGG | + | chr3.3:8393308-8393327 | MS.gene069299:CDS | 35.0% |
| ! | TCTCCTTTTAATAACCCTGA+GGG | + | chr3.3:8396733-8396752 | MS.gene069299:CDS | 35.0% |
| ! | TGCCACAATGATTTGCAATA+TGG | + | chr3.3:8393996-8394015 | MS.gene069299:CDS | 35.0% |
| ! | TGGTCTTTTGCAACATTTAC+AGG | - | chr3.3:8392795-8392814 | None:intergenic | 35.0% |
| ! | TTCTCCTTTTAATAACCCTG+AGG | + | chr3.3:8396732-8396751 | MS.gene069299:CDS | 35.0% |
| ! | TTTGCTATATCATACGCTAC+AGG | - | chr3.3:8395137-8395156 | None:intergenic | 35.0% |
| !! | ACAGAGGTTTCAAGAGTATT+GGG | + | chr3.3:8396675-8396694 | MS.gene069299:CDS | 35.0% |
| !! | ACCACCTAAAGTGTCATTTA+CGG | - | chr3.3:8392838-8392857 | None:intergenic | 35.0% |
| !! | GATAAGTGCTGAAGATTCAA+TGG | - | chr3.3:8396174-8396193 | None:intergenic | 35.0% |
| !! | GGAAGCTTTTTATTTGGACA+CGG | + | chr3.3:8393911-8393930 | MS.gene069299:CDS | 35.0% |
| !! | GGGCATTTTGAGAATTACAA+AGG | + | chr3.3:8396323-8396342 | MS.gene069299:intron | 35.0% |
| !! | TCTTCGAAACCAAAAGTACT+TGG | - | chr3.3:8396569-8396588 | None:intergenic | 35.0% |
| !! | TTTTGGAGAAGACAAACGTT+TGG | - | chr3.3:8393886-8393905 | None:intergenic | 35.0% |
| !!! | TCTTTATTTTTGGACAAGGG+AGG | - | chr3.3:8394700-8394719 | None:intergenic | 35.0% |
| AAATAACTTCTCCCTCTCCA+AGG | - | chr3.3:8395789-8395808 | None:intergenic | 40.0% | |
| AACCCCGTAAATGACACTTT+AGG | + | chr3.3:8392831-8392850 | MS.gene069299:CDS | 40.0% | |
| AATATCCTGGTATGAACCTG+TGG | + | chr3.3:8395219-8395238 | MS.gene069299:intron | 40.0% | |
| AATCAAATACCTGTACCCTC+AGG | - | chr3.3:8396751-8396770 | None:intergenic | 40.0% | |
| AATGATACAGCAGGTGATGA+TGG | + | chr3.3:8392906-8392925 | MS.gene069299:CDS | 40.0% | |
| ACATGTCAAAGAATGGTCAG+GGG | + | chr3.3:8393279-8393298 | MS.gene069299:CDS | 40.0% | |
| ACTAGATGCAAATGCGTTAC+AGG | + | chr3.3:8393103-8393122 | MS.gene069299:CDS | 40.0% | |
| AGCTAGCTATTCATCAACCA+TGG | + | chr3.3:8396066-8396085 | MS.gene069299:intron | 40.0% | |
| AGGTTCTTGTTAGGATCTAC+GGG | + | chr3.3:8393204-8393223 | MS.gene069299:CDS | 40.0% | |
| AGTCAAAAATCAGGTGAGAC+AGG | - | chr3.3:8396229-8396248 | None:intergenic | 40.0% | |
| ATCAAATACCTGTACCCTCA+GGG | - | chr3.3:8396750-8396769 | None:intergenic | 40.0% | |
| ATCATTAGCAGGTAAATGGG+AGG | + | chr3.3:8393076-8393095 | MS.gene069299:CDS | 40.0% | |
| ATTGATGAGAAGCCCACTTA+TGG | - | chr3.3:8396483-8396502 | None:intergenic | 40.0% | |
| CACTATTATGGTCACAGAGT+TGG | - | chr3.3:8394045-8394064 | None:intergenic | 40.0% | |
| CAGCGTCTGATAAATTCAGA+AGG | - | chr3.3:8393612-8393631 | None:intergenic | 40.0% | |
| CCCACATTCAAAATGCTATC+CGG | - | chr3.3:8394760-8394779 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.3:8394551-8394570 | None:intergenic | 40.0% | |
| CTATAAGCAATCAAGCAGGT+GGG | + | chr3.3:8392760-8392779 | MS.gene069299:CDS | 40.0% | |
| CTTTGTACTCTTGGATGGTT+TGG | + | chr3.3:8395756-8395775 | MS.gene069299:intron | 40.0% | |
| GATATTATGGGATTGAACGC+AGG | + | chr3.3:8395592-8395611 | MS.gene069299:intron | 40.0% | |
| GATTCACTCAGTCATTTGGT+TGG | + | chr3.3:8395005-8395024 | MS.gene069299:intron | 40.0% | |
| GCACATCGAGTTCATAAGTT+TGG | - | chr3.3:8393571-8393590 | None:intergenic | 40.0% | |
| GCATCAGAGCTTAGAAGATA+AGG | - | chr3.3:8396709-8396728 | None:intergenic | 40.0% | |
| GCGTTCAATCCCATAATATC+AGG | - | chr3.3:8395592-8395611 | None:intergenic | 40.0% | |
| GCTATAAGAGCAGAAATGGA+TGG | - | chr3.3:8393656-8393675 | None:intergenic | 40.0% | |
| GTACATGTCAAAGAATGGTC+AGG | + | chr3.3:8393277-8393296 | MS.gene069299:CDS | 40.0% | |
| GTACCCTCAGGGTTATTAAA+AGG | - | chr3.3:8396739-8396758 | None:intergenic | 40.0% | |
| GTAGATGATTCTCAGCAAGA+AGG | - | chr3.3:8394834-8394853 | None:intergenic | 40.0% | |
| GTTGCTATGTTTCGAGATCA+TGG | + | chr3.3:8394601-8394620 | MS.gene069299:intron | 40.0% | |
| TATAAGCAATCAAGCAGGTG+GGG | + | chr3.3:8392761-8392780 | MS.gene069299:CDS | 40.0% | |
| TCAAAGTCCAGTCTAACACT+TGG | - | chr3.3:8396380-8396399 | None:intergenic | 40.0% | |
| TCCGGCCATAAATACAGATA+AGG | - | chr3.3:8394742-8394761 | None:intergenic | 40.0% | |
| TGGTAAAGTTCAGTTGAAGG+AGG | - | chr3.3:8394436-8394455 | None:intergenic | 40.0% | |
| TGTCAGTCTATCAAAACCCT+TGG | - | chr3.3:8395837-8395856 | None:intergenic | 40.0% | |
| TGTGTACATATTGGGAGTCA+AGG | + | chr3.3:8394879-8394898 | MS.gene069299:intron | 40.0% | |
| TTCCATGATCTAGATATGCC+TGG | + | chr3.3:8393692-8393711 | MS.gene069299:CDS | 40.0% | |
| ! | ACTAGGTTTTTGTGCACCAA+GGG | + | chr3.3:8395818-8395837 | MS.gene069299:intron | 40.0% |
| ! | AGGAGCGTGAAAGATTTGTT+AGG | + | chr3.3:8395319-8395338 | MS.gene069299:CDS | 40.0% |
| ! | CACTCGCAAATCATCTTTTC+TGG | + | chr3.3:8395671-8395690 | MS.gene069299:CDS | 40.0% |
| ! | CAGGAAGATGAAGAGAGTTT+TGG | + | chr3.3:8396929-8396948 | MS.gene069299:CDS | 40.0% |
| ! | CCGGATAGCATTTTGAATGT+GGG | + | chr3.3:8394757-8394776 | MS.gene069299:intron | 40.0% |
| ! | CGGATAGCATTTTGAATGTG+GGG | + | chr3.3:8394758-8394777 | MS.gene069299:intron | 40.0% |
| ! | CTCGCAAATCATCTTTTCTG+GGG | + | chr3.3:8395673-8395692 | MS.gene069299:CDS | 40.0% |
| ! | CTTCAGAAATTGGCTTAGTG+AGG | + | chr3.3:8393860-8393879 | MS.gene069299:intron | 40.0% |
| ! | GAATATGAGGCGTTTCTGTA+TGG | - | chr3.3:8395187-8395206 | None:intergenic | 40.0% |
| ! | TTGTTCACCCTGAAGTGTTA+CGG | + | chr3.3:8393510-8393529 | MS.gene069299:intron | 40.0% |
| ! | TTTAATAACCCTGAGGGTAC+AGG | + | chr3.3:8396739-8396758 | MS.gene069299:CDS | 40.0% |
| !! | AGCAAACCACTTTTGTGAGA+TGG | + | chr3.3:8395151-8395170 | MS.gene069299:CDS | 40.0% |
| !! | ATTTTGGAAAAGGAGCTGTC+AGG | + | chr3.3:8393951-8393970 | MS.gene069299:CDS | 40.0% |
| !! | CACCTAAAGTGTCATTTACG+GGG | - | chr3.3:8392836-8392855 | None:intergenic | 40.0% |
| !! | CCACCTAAAGTGTCATTTAC+GGG | - | chr3.3:8392837-8392856 | None:intergenic | 40.0% |
| !! | GATGAATAGCTAGCTCTGTA+TGG | - | chr3.3:8396061-8396080 | None:intergenic | 40.0% |
| !! | GGAGCGTGAAAGATTTGTTA+GGG | + | chr3.3:8395320-8395339 | MS.gene069299:CDS | 40.0% |
| !!! | AGATTGGCTTTCTTTTCACC+AGG | - | chr3.3:8393713-8393732 | None:intergenic | 40.0% |
| !!! | ATGAAGAGAGTTTTGGGTCT+TGG | + | chr3.3:8396936-8396955 | MS.gene069299:CDS | 40.0% |
| AACTGAGGAAACCTCACGAA+AGG | + | chr3.3:8393184-8393203 | MS.gene069299:CDS | 45.0% | |
| ACCAGAGTTCTTCGATCCTT+TGG | - | chr3.3:8396904-8396923 | None:intergenic | 45.0% | |
| ACTATTCGTGGCTCGTTTCA+TGG | + | chr3.3:8395986-8396005 | MS.gene069299:intron | 45.0% | |
| AGAACCAAGTGAGAGTGAAG+TGG | + | chr3.3:8395618-8395637 | MS.gene069299:CDS | 45.0% | |
| AGAATCTCCTTTGCTTCTGC+TGG | - | chr3.3:8393053-8393072 | None:intergenic | 45.0% | |
| AGGGCATATTTGAAGACCTC+AGG | + | chr3.3:8395339-8395358 | MS.gene069299:CDS | 45.0% | |
| CACCAGGCATATCTAGATCA+TGG | - | chr3.3:8393697-8393716 | None:intergenic | 45.0% | |
| CCAATCTTTGGCCTACATTG+AGG | + | chr3.3:8393726-8393745 | MS.gene069299:CDS | 45.0% | |
| CCACCTGCTTGATTGCTTAT+AGG | - | chr3.3:8392762-8392781 | None:intergenic | 45.0% | |
| CCCGTAAATGACACTTTAGG+TGG | + | chr3.3:8392834-8392853 | MS.gene069299:CDS | 45.0% | |
| CCTAACAAGAACCTTTCGTG+AGG | - | chr3.3:8393198-8393217 | None:intergenic | 45.0% | |
| CCTATAAGCAATCAAGCAGG+TGG | + | chr3.3:8392759-8392778 | MS.gene069299:CDS | 45.0% | |
| CCTCAATGTAGGCCAAAGAT+TGG | - | chr3.3:8393729-8393748 | None:intergenic | 45.0% | |
| CCTCACGAAAGGTTCTTGTT+AGG | + | chr3.3:8393195-8393214 | MS.gene069299:CDS | 45.0% | |
| CGAAGAACTCTGGTATCTTC+AGG | + | chr3.3:8396910-8396929 | MS.gene069299:CDS | 45.0% | |
| CTATTCGTGGCTCGTTTCAT+GGG | + | chr3.3:8395987-8396006 | MS.gene069299:intron | 45.0% | |
| GCAGGTGAAGATGACAAACA+AGG | + | chr3.3:8392954-8392973 | MS.gene069299:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.3:8394552-8394571 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.3:8394555-8394574 | None:intergenic | 45.0% | |
| GGAAACCAACAACACTCATC+AGG | - | chr3.3:8394813-8394832 | None:intergenic | 45.0% | |
| GGCAGCTATAAGAGCAGAAA+TGG | - | chr3.3:8393660-8393679 | None:intergenic | 45.0% | |
| GGTTCTTGTTAGGATCTACG+GGG | + | chr3.3:8393205-8393224 | MS.gene069299:CDS | 45.0% | |
| GTAAAACGTCCTAGTAGACG+AGG | - | chr3.3:8393305-8393324 | None:intergenic | 45.0% | |
| GTTCAGTTGAAGGAGGAAAC+AGG | - | chr3.3:8394429-8394448 | None:intergenic | 45.0% | |
| GTTGCAAAAGACCAAGCAGT+TGG | + | chr3.3:8392801-8392820 | MS.gene069299:CDS | 45.0% | |
| GTTGTGTAACTCAAAGGGGA+GGG | - | chr3.3:8394669-8394688 | None:intergenic | 45.0% | |
| TGAATGCTTCAGAAAGCCAC+AGG | - | chr3.3:8395238-8395257 | None:intergenic | 45.0% | |
| TGCTGAGAATCCTGTAAACC+AGG | + | chr3.3:8392716-8392735 | MS.gene069299:CDS | 45.0% | |
| TGTTGTGTAACTCAAAGGGG+AGG | - | chr3.3:8394670-8394689 | None:intergenic | 45.0% | |
| TTACAGGTGATCCCTCTCAA+GGG | + | chr3.3:8393119-8393138 | MS.gene069299:CDS | 45.0% | |
| TTATTTGGACACGGTCGACA+AGG | + | chr3.3:8393920-8393939 | MS.gene069299:CDS | 45.0% | |
| TTGTGTAACTCAAAGGGGAG+GGG | - | chr3.3:8394668-8394687 | None:intergenic | 45.0% | |
| ! | CACTAGGTTTTTGTGCACCA+AGG | + | chr3.3:8395817-8395836 | MS.gene069299:intron | 45.0% |
| ! | GCCGGATAGCATTTTGAATG+TGG | + | chr3.3:8394756-8394775 | MS.gene069299:intron | 45.0% |
| ! | GGGCCTTTGGGGAATAATTT+CGG | + | chr3.3:8395693-8395712 | MS.gene069299:CDS | 45.0% |
| ! | GGTGCTATGAAAGACAAAGC+AGG | + | chr3.3:8392936-8392955 | MS.gene069299:CDS | 45.0% |
| ! | TACAGCCTGATGAGTGTTGT+TGG | + | chr3.3:8394805-8394824 | MS.gene069299:intron | 45.0% |
| !! | GCAGGTGATGATGGAAAAGA+AGG | + | chr3.3:8392915-8392934 | MS.gene069299:CDS | 45.0% |
| !! | GGTTTCAAGAGTATTGGGCA+AGG | + | chr3.3:8396680-8396699 | MS.gene069299:CDS | 45.0% |
| !!! | ATCATCTTTTCTGGGGCCTT+TGG | + | chr3.3:8395680-8395699 | MS.gene069299:CDS | 45.0% |
| !!! | TCATCTTTTCTGGGGCCTTT+GGG | + | chr3.3:8395681-8395700 | MS.gene069299:CDS | 45.0% |
| !!! | TTTTGGGTCTTGGCTTGTTC+AGG | + | chr3.3:8396946-8396965 | MS.gene069299:CDS | 45.0% |
| !!! | ATATTTAATTTAATTTTCTT+TGG | + | chr3.3:8394134-8394153 | MS.gene069299:intron | 5.0% |
| AAAGTGGCCAGCTACAACTG+AGG | + | chr3.3:8393169-8393188 | MS.gene069299:CDS | 50.0% | |
| ACAGGGGTTTCAATGGCATC+TGG | - | chr3.3:8393008-8393027 | None:intergenic | 50.0% | |
| CAAGGGGGCAATGACAAATG+AGG | + | chr3.3:8393136-8393155 | MS.gene069299:CDS | 50.0% | |
| CTTGTTAGGATCTACGGGGA+GGG | + | chr3.3:8393209-8393228 | MS.gene069299:CDS | 50.0% | |
| GAAAGCCACAGGTTCATACC+AGG | - | chr3.3:8395227-8395246 | None:intergenic | 50.0% | |
| GAGGTTTCCTCAGTTGTAGC+TGG | - | chr3.3:8393179-8393198 | None:intergenic | 50.0% | |
| GCCAAAGGATCGAAGAACTC+TGG | + | chr3.3:8396900-8396919 | MS.gene069299:CDS | 50.0% | |
| GCTGCTTACAGGGGTTTCAA+TGG | - | chr3.3:8393015-8393034 | None:intergenic | 50.0% | |
| GGTTCTCTTGACAGACGTTG+AGG | + | chr3.3:8395299-8395318 | MS.gene069299:intron | 50.0% | |
| GTTACAGGTGATCCCTCTCA+AGG | + | chr3.3:8393118-8393137 | MS.gene069299:CDS | 50.0% | |
| TACAGGTGATCCCTCTCAAG+GGG | + | chr3.3:8393120-8393139 | MS.gene069299:CDS | 50.0% | |
| TCAAAGGGGAGGGGATTTAC+AGG | - | chr3.3:8394659-8394678 | None:intergenic | 50.0% | |
| TCGCAGCCATCTCACAAAAG+TGG | - | chr3.3:8395160-8395179 | None:intergenic | 50.0% | |
| TCTCCTTTGCTTCTGCTGGA+AGG | - | chr3.3:8393049-8393068 | None:intergenic | 50.0% | |
| TCTTGTTAGGATCTACGGGG+AGG | + | chr3.3:8393208-8393227 | MS.gene069299:CDS | 50.0% | |
| TGCTCCACTTCACTCTCACT+TGG | - | chr3.3:8395625-8395644 | None:intergenic | 50.0% | |
| TTGTCATTGCCCCCTTGAGA+GGG | - | chr3.3:8393133-8393152 | None:intergenic | 50.0% | |
| TTTCTGTAGTAGGAGTCGCC+TGG | - | chr3.3:8392737-8392756 | None:intergenic | 50.0% | |
| TTTGTCATTGCCCCCTTGAG+AGG | - | chr3.3:8393134-8393153 | None:intergenic | 50.0% | |
| ! | GGTCAGCTTTGCTGCTTACA+GGG | - | chr3.3:8393025-8393044 | None:intergenic | 50.0% |
| ! | GGTTTTCTGCACCAACTGCT+TGG | - | chr3.3:8392815-8392834 | None:intergenic | 50.0% |
| ! | GTCAGCTTTGCTGCTTACAG+GGG | - | chr3.3:8393024-8393043 | None:intergenic | 50.0% |
| ! | TTGGCTTGAGACCTTGGAGA+GGG | + | chr3.3:8395775-8395794 | MS.gene069299:intron | 50.0% |
| !! | GATGGTTTGGCTTGAGACCT+TGG | + | chr3.3:8395769-8395788 | MS.gene069299:intron | 50.0% |
| !! | TTTGGCTTGAGACCTTGGAG+AGG | + | chr3.3:8395774-8395793 | MS.gene069299:intron | 50.0% |
| !!! | CATCTTTTCTGGGGCCTTTG+GGG | + | chr3.3:8395682-8395701 | MS.gene069299:CDS | 50.0% |
| ACAGGTGATCCCTCTCAAGG+GGG | + | chr3.3:8393121-8393140 | MS.gene069299:CDS | 55.0% | |
| AGCTGTCAGGCTCGCATCAA+CGG | + | chr3.3:8393964-8393983 | MS.gene069299:CDS | 55.0% | |
| CAGGCTCGCATCAACGGATA+GGG | + | chr3.3:8393970-8393989 | MS.gene069299:CDS | 55.0% | |
| CCTTTGCTTCTGCTGGAAGG+CGG | - | chr3.3:8393046-8393065 | None:intergenic | 55.0% | |
| GTAGGAGTCGCCTGGTTTAC+AGG | - | chr3.3:8392729-8392748 | None:intergenic | 55.0% | |
| TCAGGCTCGCATCAACGGAT+AGG | + | chr3.3:8393969-8393988 | MS.gene069299:CDS | 55.0% | |
| ! | CGGTCAGCTTTGCTGCTTAC+AGG | - | chr3.3:8393026-8393045 | None:intergenic | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3.3:8394511-8394530 | MS.gene069299:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.3:8394507-8394526 | None:intergenic | 60.0% | |
| CCGCCTTCCAGCAGAAGCAA+AGG | + | chr3.3:8393043-8393062 | MS.gene069299:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3.3:8394512-8394531 | MS.gene069299:intron | 60.0% | |
| TAGGATCTACGGGGAGGGTG+TGG | + | chr3.3:8393214-8393233 | MS.gene069299:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3.3:8394539-8394558 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3.3:8394524-8394543 | MS.gene069299:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3.3:8394537-8394556 | MS.gene069299:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3.3:8394524-8394543 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3.3:8394523-8394542 | MS.gene069299:intron | 65.0% | |
| GCGTCTGCAGCGCATGCCAA+AGG | + | chr3.3:8396885-8396904 | MS.gene069299:CDS | 65.0% | |
| GGTCAGGGGCCTCGTCTACT+AGG | + | chr3.3:8393293-8393312 | MS.gene069299:CDS | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.3:8394506-8394525 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3.3:8394523-8394542 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3.3:8394522-8394541 | MS.gene069299:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3.3:8394518-8394537 | MS.gene069299:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3.3:8394517-8394536 | MS.gene069299:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 8392675 | 8396980 | 8392675 | ID=MS.gene069299 |
| chr3.3 | mRNA | 8392675 | 8396980 | 8392675 | ID=MS.gene069299.t1;Parent=MS.gene069299 |
| chr3.3 | exon | 8392675 | 8393358 | 8392675 | ID=MS.gene069299.t1.exon1;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8392675 | 8393358 | 8392675 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8393626 | 8393747 | 8393626 | ID=MS.gene069299.t1.exon2;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8393626 | 8393747 | 8393626 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8393866 | 8394061 | 8393866 | ID=MS.gene069299.t1.exon3;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8393866 | 8394061 | 8393866 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8395110 | 8395227 | 8395110 | ID=MS.gene069299.t1.exon4;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8395110 | 8395227 | 8395110 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8395313 | 8395360 | 8395313 | ID=MS.gene069299.t1.exon5;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8395313 | 8395360 | 8395313 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8395614 | 8395714 | 8395614 | ID=MS.gene069299.t1.exon6;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8395614 | 8395714 | 8395614 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8396631 | 8396760 | 8396631 | ID=MS.gene069299.t1.exon7;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8396631 | 8396760 | 8396631 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| chr3.3 | exon | 8396877 | 8396980 | 8396877 | ID=MS.gene069299.t1.exon8;Parent=MS.gene069299.t1 |
| chr3.3 | CDS | 8396877 | 8396980 | 8396877 | ID=cds.MS.gene069299.t1;Parent=MS.gene069299.t1 |
| Gene Sequence |
| Protein sequence |
