AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051122


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051122.t1 MTR_8g020880 97.271 733 12 5 1 732 1 726 0.0 1463
MS.gene051122.t1 MTR_8g020880 96.830 631 12 5 1 630 1 624 0.0 1251
MS.gene051122.t1 MTR_7g108940 35.680 412 218 10 227 593 146 555 1.02e-62 224
MS.gene051122.t1 MTR_7g108940 35.680 412 218 10 227 593 146 555 2.27e-62 224
MS.gene051122.t1 MTR_5g007870 43.541 209 106 3 221 417 121 329 1.58e-37 150
MS.gene051122.t1 MTR_5g007870 50.394 127 54 2 443 560 446 572 2.22e-28 122
MS.gene051122.t1 MTR_4g123930 29.787 329 200 6 248 552 112 433 2.33e-34 137
MS.gene051122.t1 MTR_4g123930 29.846 325 197 6 252 552 116 433 2.06e-33 136
MS.gene051122.t1 MTR_4g123930 29.450 309 187 6 268 552 2 303 4.63e-32 127
MS.gene051122.t1 MTR_4g123930 29.450 309 187 6 268 552 2 303 1.81e-30 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051122.t1 AT3G14050 67.121 733 198 9 1 721 2 703 0.0 906
MS.gene051122.t1 AT1G54130 64.495 752 204 14 1 730 2 712 0.0 891
MS.gene051122.t1 AT4G02260 39.316 351 188 7 227 552 148 498 2.83e-60 218
MS.gene051122.t1 AT4G02260 39.316 351 188 7 227 552 148 498 6.17e-60 218
MS.gene051122.t1 AT4G02260 39.316 351 188 7 227 552 148 498 6.64e-60 218
MS.gene051122.t1 AT4G02260 39.205 352 188 8 227 552 148 499 2.30e-58 213
MS.gene051122.t1 AT3G17470 31.212 330 198 7 246 552 107 430 4.18e-37 145
MS.gene051122.t1 AT3G17470 31.212 330 198 7 246 552 122 445 4.24e-36 144
MS.gene051122.t1 AT3G17470 31.212 330 198 7 246 552 107 430 4.49e-36 144

Find 177 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATCTTCAACTTGCAATT+TGG 0.118666 8.3:-70359293 None:intergenic
ATTAACTATGATTTCGAATT+AGG 0.147309 8.3:+70356022 MS.gene051122:CDS
GATGATATCCATGACATTTA+TGG 0.178626 8.3:+70358250 MS.gene051122:CDS
CTTACTTATGATTATATATA+CGG 0.188737 8.3:+70356902 MS.gene051122:CDS
GATGGTGTTGGTGGTGATTC+TGG 0.210059 8.3:+70356484 MS.gene051122:CDS
ATGCATTTGCAAGCAGAATT+TGG 0.213922 8.3:+70358548 MS.gene051122:CDS
TGCTTTGGGTTCTTCTTGTT+TGG 0.222221 8.3:+70356408 MS.gene051122:CDS
TTGTGAAGAGTTTGTTATTA+AGG 0.223595 8.3:+70356627 MS.gene051122:CDS
ATTTCTTATCATGTCATTTC+TGG 0.239861 8.3:+70357960 MS.gene051122:CDS
TCGAGTTTGCACAAAATTCT+TGG 0.262479 8.3:-70359157 None:intergenic
TTGCAATTTGGATCACTTAC+AGG 0.265645 8.3:-70359281 None:intergenic
CTGAATTTCTTCCCTATATT+CGG 0.288112 8.3:-70359360 None:intergenic
GCGACGGCGGCGTCTACGTC+TGG 0.303823 8.3:+70356073 MS.gene051122:CDS
CTCGACAGTACTAGATTTGT+TGG 0.308633 8.3:+70359175 MS.gene051122:CDS
TAGAAGTTGTTCACCGGTTA+TGG 0.315278 8.3:+70358317 MS.gene051122:CDS
CAATCAGGCTTGTAAGAATA+TGG 0.320693 8.3:-70358758 None:intergenic
TCCGTATTTGCAGCATTGTT+TGG 0.330409 8.3:+70356793 MS.gene051122:CDS
GATTATATATACGGGATGTT+TGG 0.331195 8.3:+70356911 MS.gene051122:CDS
ACCGATTAGGAATAGCTAAT+TGG 0.332077 8.3:+70357793 MS.gene051122:CDS
AAGAGCTGTCCTCATTAAAT+TGG 0.336185 8.3:+70357671 MS.gene051122:CDS
CGACGAAGTTTGGTGGATCT+TGG 0.336434 8.3:+70356245 MS.gene051122:CDS
TCCAATTAGCTATTCCTAAT+CGG 0.340721 8.3:-70357794 None:intergenic
GCACCTTTGGCCAACCGATT+AGG 0.347291 8.3:+70357780 MS.gene051122:CDS
ACAAGTATCTGACCGAATAT+AGG 0.349388 8.3:+70359348 MS.gene051122:CDS
TTTGGAAACTGCTGTGTTGT+TGG 0.368793 8.3:+70356811 MS.gene051122:CDS
GGTGGTGGTGGTGAATTTGA+TGG 0.370524 8.3:+70356466 MS.gene051122:CDS
ATGATATCCATGACATTTAT+GGG 0.372392 8.3:+70358251 MS.gene051122:CDS
TGGGTTTGTGAGAAGTGCTT+TGG 0.378293 8.3:+70356393 MS.gene051122:CDS
ATCAACAACTTCTTAGCATA+AGG 0.384347 8.3:-70356577 None:intergenic
GAGAGATCATAGTCCAGTTT+CGG 0.385330 8.3:+70356270 MS.gene051122:CDS
GAAAGCTCTTTGTGCTGTAC+AGG 0.386440 8.3:-70357855 None:intergenic
ATTCTTACAAGCCTGATTGC+GGG 0.405333 8.3:+70358762 MS.gene051122:CDS
TAACCGGTGAACAACTTCTA+AGG 0.405585 8.3:-70358314 None:intergenic
CTTTGCAAACCTCTGCTGCT+TGG 0.408434 8.3:-70357739 None:intergenic
TTGTTCGAATTTGTACTTCA+AGG 0.408493 8.3:-70358520 None:intergenic
CCTCCCTGATCGAATTGTTC+CGG 0.409534 8.3:-70356344 None:intergenic
GGTCCATCCTGCCCGCAATC+AGG 0.410211 8.3:-70358773 None:intergenic
GATGACACTAGATGCATTAC+CGG 0.413123 8.3:+70357713 MS.gene051122:CDS
GGCGTCTACGTCTGGGAAAT+CGG 0.414943 8.3:+70356081 MS.gene051122:CDS
GGTGGTGAATTTGATGGTGT+TGG 0.416217 8.3:+70356472 MS.gene051122:CDS
GGGTTTGTGAGAAGTGCTTT+GGG 0.417938 8.3:+70356394 MS.gene051122:CDS
GGAGTTGCTGATTTAGTTGA+AGG 0.421830 8.3:+70356938 MS.gene051122:CDS
TCCAAACAATGCTGCAAATA+CGG 0.422488 8.3:-70356794 None:intergenic
CAAGTATCTGACCGAATATA+GGG 0.424375 8.3:+70359349 MS.gene051122:CDS
GAGGTTTGCAAAGGAAACTT+TGG 0.428632 8.3:+70357749 MS.gene051122:CDS
AACCTCTGCTGCTTGGCAAC+CGG 0.433003 8.3:-70357732 None:intergenic
ATGGGTGCCGGTGCGGGTAC+CGG 0.442415 8.3:+70356325 MS.gene051122:CDS
ATCTCTGCACACTGTGGTGA+TGG 0.443111 8.3:+70358481 MS.gene051122:CDS
AGTAAAGATTCCACTTCTGT+TGG 0.443308 8.3:+70358680 MS.gene051122:CDS
TGTTTGGATTATGATTCTAC+TGG 0.445310 8.3:+70356424 MS.gene051122:CDS
AATTTGGATTCGCTGCTCAT+TGG 0.445751 8.3:+70358564 MS.gene051122:CDS
TCCAAATTGCAAGTTGAAGA+TGG 0.447857 8.3:+70359292 MS.gene051122:CDS
CATGCACCTCAGACCATAAC+CGG 0.449375 8.3:-70358330 None:intergenic
ACAGGCTTGTGATTCAGTCT+TGG 0.449925 8.3:-70359263 None:intergenic
TACAACATACCCATTGAACT+TGG 0.450219 8.3:-70358380 None:intergenic
ATGCTACTACTACACGAAAC+AGG 0.451567 8.3:-70356304 None:intergenic
AATTCAACAGTAGTTGCTGC+TGG 0.454268 8.3:+70356848 MS.gene051122:CDS
ATACATTGCCCCAAGTTCAA+TGG 0.454579 8.3:+70358370 MS.gene051122:CDS
ACTCATTGCTTCGCACTGCC+AGG 0.456952 8.3:-70358660 None:intergenic
TAGATTTGTTGGAGAGGGTC+GGG 0.457657 8.3:+70359186 MS.gene051122:CDS
TGGTGGTGATTCTGGAATTG+TGG 0.457934 8.3:+70356492 MS.gene051122:CDS
ATCTTCGTCACCGGCGTCTA+CGG 0.466938 8.3:+70356051 MS.gene051122:CDS
TTGGATTCGCTGCTCATTGG+AGG 0.470246 8.3:+70358567 MS.gene051122:CDS
AGTAGCATGGGTGCCGGTGC+GGG 0.474221 8.3:+70356319 MS.gene051122:CDS
TACGTCTGGGAAATCGGTGA+TGG 0.474358 8.3:+70356087 MS.gene051122:CDS
TACATTGCCCCAAGTTCAAT+GGG 0.477235 8.3:+70358371 MS.gene051122:CDS
GCTGTGTTGTTGGCTTTGAT+CGG 0.482957 8.3:+70356821 MS.gene051122:CDS
GCCTCAATTCTTCCTTCAGA+GGG 0.483136 8.3:-70359241 None:intergenic
CGATCAGGGAGGGGAAGTAC+TGG 0.484040 8.3:+70356355 MS.gene051122:CDS
GGTACCGGAACAATTCGATC+AGG 0.485761 8.3:+70356340 MS.gene051122:CDS
TGTTCGAATTTGTACTTCAA+GGG 0.486391 8.3:-70358519 None:intergenic
GCTGCGCTTGATTGTTGATA+AGG 0.487554 8.3:+70358273 MS.gene051122:CDS
AGCTTTCTCAGCTTCACAAA+AGG 0.487843 8.3:-70356650 None:intergenic
AGATTACGCGGTGGTGGTGG+TGG 0.491666 8.3:+70356451 MS.gene051122:CDS
GGGAGGGGAAGTACTGGTGG+TGG 0.494745 8.3:+70356361 MS.gene051122:CDS
GGGCTCGATGGGTTGTCACC+TGG 0.495606 8.3:+70358642 MS.gene051122:CDS
GTTAGATTACGCGGTGGTGG+TGG 0.504725 8.3:+70356448 MS.gene051122:CDS
AGATACTTGTCAGGTATGGC+TGG 0.505901 8.3:-70359335 None:intergenic
AGAGCTTTCGTCAAAGCTTG+TGG 0.510991 8.3:+70357869 MS.gene051122:CDS
TTACTTATGATTATATATAC+GGG 0.511289 8.3:+70356903 MS.gene051122:CDS
TTACGCGGTGGTGGTGGTGG+TGG 0.511301 8.3:+70356454 MS.gene051122:CDS
TATTCGGTCAGATACTTGTC+AGG 0.512446 8.3:-70359344 None:intergenic
ATCTTCATCACCACCACCAC+CGG 0.515186 8.3:-70356179 None:intergenic
CGCTGCTCATTGGAGGTACA+AGG 0.516170 8.3:+70358574 MS.gene051122:CDS
TTCTTCATATGTGCTTCAGA+TGG 0.516537 8.3:+70358613 MS.gene051122:CDS
GGTGAATTTGATGGTGTTGG+TGG 0.516562 8.3:+70356475 MS.gene051122:CDS
CGGTTATGGTCTGAGGTGCA+TGG 0.519568 8.3:+70358331 MS.gene051122:CDS
CTAGATTTGTTGGAGAGGGT+CGG 0.525008 8.3:+70359185 MS.gene051122:CDS
TTACAAGCCTGATTGCGGGC+AGG 0.526518 8.3:+70358766 MS.gene051122:CDS
GGAGGGGAAGTACTGGTGGT+GGG 0.527525 8.3:+70356362 MS.gene051122:CDS
GGCCTCAATTCTTCCTTCAG+AGG 0.533475 8.3:-70359242 None:intergenic
TGAGAAAGCTCATAGAGGAC+AGG 0.534366 8.3:+70356663 MS.gene051122:CDS
TGGTGATGAAGATGAATTGA+AGG 0.535373 8.3:+70356189 MS.gene051122:CDS
ACAACATACCCATTGAACTT+GGG 0.535483 8.3:-70358379 None:intergenic
GTCACCGGCGTCTACGGCGA+CGG 0.537490 8.3:+70356057 MS.gene051122:CDS
AGATGGTTGAGTGGGCTCGA+TGG 0.537950 8.3:+70358630 MS.gene051122:CDS
GATGGTTGAGTGGGCTCGAT+GGG 0.540134 8.3:+70358631 MS.gene051122:CDS
CGGGCTAACTGTATCAAGCA+TGG 0.545579 8.3:+70359397 MS.gene051122:CDS
AACATATAGGTTCCCTCTGA+AGG 0.546405 8.3:+70359229 MS.gene051122:CDS
GACAGTTATCAGCATGAGAA+GGG 0.546477 8.3:-70358736 None:intergenic
TGTTTCGTGTAGTAGTAGCA+TGG 0.546500 8.3:+70356306 MS.gene051122:CDS
ATCGACAAATCCAACAGAAG+TGG 0.547140 8.3:-70358690 None:intergenic
ATATACGGGATGTTTGGAGC+TGG 0.549390 8.3:+70356917 MS.gene051122:CDS
CCAAATTGCAAGTTGAAGAT+GGG 0.550752 8.3:+70359293 MS.gene051122:CDS
AATTGTTCCGGTACCCGCAC+CGG 0.551906 8.3:-70356332 None:intergenic
ATTAGCTATTCCTAATCGGT+TGG 0.552553 8.3:-70357790 None:intergenic
CTCTTGCATCTGCCATTGCA+AGG 0.553256 8.3:-70357653 None:intergenic
TTGCAAGGAACATTGTATGC+AGG 0.553528 8.3:-70357638 None:intergenic
GAGCAAGCACTCAAAGATGA+AGG 0.553848 8.3:+70357936 MS.gene051122:CDS
GCATACAATGTTCCTTGCAA+TGG 0.556040 8.3:+70357641 MS.gene051122:CDS
ACGTCTGGGAAATCGGTGAT+GGG 0.557642 8.3:+70356088 MS.gene051122:CDS
ATTCAACAGTAGTTGCTGCT+GGG 0.558656 8.3:+70356849 MS.gene051122:CDS
TAGTAGCATGGGTGCCGGTG+CGG 0.559495 8.3:+70356318 MS.gene051122:CDS
AAGCCTGATTGCGGGCAGGA+TGG 0.560710 8.3:+70358770 MS.gene051122:CDS
TATTCTTACAAGCCTGATTG+CGG 0.560842 8.3:+70358761 MS.gene051122:CDS
GCTACTGCAAGCAGCATGGT+TGG 0.562551 8.3:+70359428 MS.gene051122:CDS
GGTCAGATACTTGTCAGGTA+TGG 0.563602 8.3:-70359339 None:intergenic
AGCGCAGCCCATAAATGTCA+TGG 0.564123 8.3:-70358258 None:intergenic
TACCGGTTGCCAAGCAGCAG+AGG 0.564469 8.3:+70357730 MS.gene051122:CDS
GGAACAATTCGATCAGGGAG+GGG 0.565296 8.3:+70356346 MS.gene051122:CDS
CGACGGCGGCGTCTACGTCT+GGG 0.569402 8.3:+70356074 MS.gene051122:CDS
CTTATCATGTCATTTCTGGA+CGG 0.571086 8.3:+70357964 MS.gene051122:CDS
CAACATACCCATTGAACTTG+GGG 0.571860 8.3:-70358378 None:intergenic
GGACAGTTATCAGCATGAGA+AGG 0.573734 8.3:-70358737 None:intergenic
GCTGTAGGTTGACAACATAT+AGG 0.573805 8.3:+70359216 MS.gene051122:CDS
TGTTCACCGGTTATGGTCTG+AGG 0.575398 8.3:+70358324 MS.gene051122:CDS
GAGTTGCTGATTTAGTTGAA+GGG 0.580287 8.3:+70356939 MS.gene051122:CDS
TCTCTGCACACTGTGGTGAT+GGG 0.580339 8.3:+70358482 MS.gene051122:CDS
ATCGATCAGCCAATTTAATG+AGG 0.581475 8.3:-70357680 None:intergenic
GTTTCGTGTAGTAGTAGCAT+GGG 0.582976 8.3:+70356307 MS.gene051122:CDS
AAGCCTTAGAAGTTGTTCAC+CGG 0.583932 8.3:+70358311 MS.gene051122:CDS
GGGTCGGGCGAGCAAGCTGT+AGG 0.584040 8.3:+70359201 MS.gene051122:CDS
ACTGAGTCACTTAAGCAAGC+TGG 0.586111 8.3:+70357572 MS.gene051122:CDS
AGTACTAGATTTGTTGGAGA+GGG 0.591903 8.3:+70359181 MS.gene051122:CDS
CGGAACAATTCGATCAGGGA+GGG 0.592758 8.3:+70356345 MS.gene051122:CDS
GGTTATGGTCTGAGGTGCAT+GGG 0.593196 8.3:+70358332 MS.gene051122:CDS
CACACTGTGGTGATGGGTGA+AGG 0.596315 8.3:+70358488 MS.gene051122:CDS
AAAGCTCTTTGTGCTGTACA+GGG 0.599815 8.3:-70357854 None:intergenic
GGTGTAGAACACACACTACT+CGG 0.601489 8.3:-70355992 None:intergenic
ATTAGGAATAGCTAATTGGA+AGG 0.601826 8.3:+70357797 MS.gene051122:CDS
TTCAGCGAATGTATGATCGC+GGG 0.602849 8.3:+70359378 MS.gene051122:CDS
GCGCTTGATTGTTGATAAGG+AGG 0.603331 8.3:+70358276 MS.gene051122:CDS
TGTAGTAGTAGCATGGGTGC+CGG 0.604049 8.3:+70356313 MS.gene051122:CDS
GTTCGAATTTGTACTTCAAG+GGG 0.605083 8.3:-70358518 None:intergenic
ATTCCTAATCGGTTGGCCAA+AGG 0.606063 8.3:-70357783 None:intergenic
CAAGCAGCAGAGGTTTGCAA+AGG 0.607809 8.3:+70357740 MS.gene051122:CDS
GCATGAGAAGGGAACTTGCA+AGG 0.608349 8.3:-70358725 None:intergenic
TCAGGGAGGGGAAGTACTGG+TGG 0.609082 8.3:+70356358 MS.gene051122:CDS
TGTGCTTCAGATGGTTGAGT+GGG 0.610056 8.3:+70358622 MS.gene051122:CDS
ATGTGCTTCAGATGGTTGAG+TGG 0.615998 8.3:+70358621 MS.gene051122:CDS
AGGATCTAGATCTTCGTCAC+CGG 0.616184 8.3:+70356042 MS.gene051122:CDS
GGGCTAACTGTATCAAGCAT+GGG 0.621683 8.3:+70359398 MS.gene051122:CDS
TGTGGTGATGGGTGAAGGCA+AGG 0.624487 8.3:+70358493 MS.gene051122:CDS
TACTGCTACTGCAAGCAGCA+TGG 0.624524 8.3:+70359424 MS.gene051122:CDS
GGTGTTAGATTACGCGGTGG+TGG 0.624885 8.3:+70356445 MS.gene051122:CDS
GCCGCCGTCGCCGTAGACGC+CGG 0.625619 8.3:-70356061 None:intergenic
AAATCATAGTTAATCTGATG+CGG 0.628203 8.3:-70356013 None:intergenic
TCCCTCTGAAGGAAGAATTG+AGG 0.628438 8.3:+70359240 MS.gene051122:CDS
CAAGATCCACCAAACTTCGT+CGG 0.628498 8.3:-70356244 None:intergenic
TCTGGGAAATCGGTGATGGG+TGG 0.638476 8.3:+70356091 MS.gene051122:CDS
CAGTACTAGATTTGTTGGAG+AGG 0.642485 8.3:+70359180 MS.gene051122:CDS
TGTTTGTAGATGCGAGCTAG+TGG 0.645770 8.3:+70356767 MS.gene051122:intron
GAAGCTGAGAAAGCTCATAG+AGG 0.646306 8.3:+70356658 MS.gene051122:CDS
TCTACTGGTGTTAGATTACG+CGG 0.646568 8.3:+70356439 MS.gene051122:CDS
AGTTGCTGATTTAGTTGAAG+GGG 0.648111 8.3:+70356940 MS.gene051122:CDS
ACCGGCGTCTACGGCGACGG+CGG 0.651192 8.3:+70356060 MS.gene051122:CDS
ACATGCTGCTTCACCACCGT+CGG 0.651198 8.3:-70356136 None:intergenic
TCAATCATGATAACAAACAC+AGG 0.655763 8.3:-70358794 None:intergenic
CAAGGAACATTGTATGCAGG+CGG 0.659437 8.3:-70357635 None:intergenic
GTACCGGAACAATTCGATCA+GGG 0.659700 8.3:+70356341 MS.gene051122:CDS
ATTCAGCGAATGTATGATCG+CGG 0.666404 8.3:+70359377 MS.gene051122:CDS
CCGGAACAATTCGATCAGGG+AGG 0.701868 8.3:+70356344 MS.gene051122:CDS
TATCATGATTGAGAATGACA+AGG 0.707357 8.3:+70358805 MS.gene051122:CDS
GTAGAACACACACTACTCGG+TGG 0.713186 8.3:-70355989 None:intergenic
ACTGGTGTTAGATTACGCGG+TGG 0.729692 8.3:+70356442 MS.gene051122:CDS
TGAGAAGGGAACTTGCAAGG+TGG 0.737719 8.3:-70358722 None:intergenic
TTATCAATCTCTGCACACTG+TGG 0.751179 8.3:+70358475 MS.gene051122:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTACTTATGATTATATATA+CGG + chr8.3:70356902-70356921 MS.gene051122:CDS 15.0%
!! TTACTTATGATTATATATAC+GGG + chr8.3:70356903-70356922 MS.gene051122:CDS 15.0%
!!! AGAATTATGTTCAATATTTT+GGG + chr8.3:70358836-70358855 MS.gene051122:intron 15.0%
!!! TAGAATTATGTTCAATATTT+TGG + chr8.3:70358835-70358854 MS.gene051122:intron 15.0%
!! ATAAATAATGAAATGAAAGC+AGG - chr8.3:70358887-70358906 None:intergenic 20.0%
!! ATTAACTATGATTTCGAATT+AGG + chr8.3:70356022-70356041 MS.gene051122:CDS 20.0%
!!! TTTAAGATTAAGATGATTGA+TGG + chr8.3:70357003-70357022 MS.gene051122:intron 20.0%
! AAACAGGAAACTGTTAAATT+AGG + chr8.3:70358985-70359004 MS.gene051122:intron 25.0%
! AAATCATAGTTAATCTGATG+CGG - chr8.3:70356016-70356035 None:intergenic 25.0%
! AACAGGAAACTGTTAAATTA+GGG + chr8.3:70358986-70359005 MS.gene051122:intron 25.0%
! AATGACAATTCAAATCCATT+AGG + chr8.3:70357255-70357274 MS.gene051122:intron 25.0%
! ATGATATCCATGACATTTAT+GGG + chr8.3:70358251-70358270 MS.gene051122:CDS 25.0%
! CAAATCTATCATAAAAAGCT+AGG - chr8.3:70357303-70357322 None:intergenic 25.0%
! CAACCACAATACAAATTAAT+CGG - chr8.3:70357431-70357450 None:intergenic 25.0%
! GAAAACAAGTGTTAAAACAA+AGG - chr8.3:70358928-70358947 None:intergenic 25.0%
! TAAATCAGATGATATAGAGA+CGG - chr8.3:70358438-70358457 None:intergenic 25.0%
! TAATAACTACAAACATCAAG+AGG - chr8.3:70357223-70357242 None:intergenic 25.0%
! TTGTACAGATATTTGAAAAC+AGG + chr8.3:70358969-70358988 MS.gene051122:intron 25.0%
!! ATTTCTTATCATGTCATTTC+TGG + chr8.3:70357960-70357979 MS.gene051122:CDS 25.0%
!! TAATTTGGATGATACTTTTG+TGG + chr8.3:70356528-70356547 MS.gene051122:CDS 25.0%
!! TTATGTGTGTTTGTGATTTT+TGG + chr8.3:70356703-70356722 MS.gene051122:intron 25.0%
!! TTTGAAGTGTGCAAATAATA+TGG - chr8.3:70358181-70358200 None:intergenic 25.0%
!! TTTTTGTATTGCTAGTGATT+TGG + chr8.3:70357376-70357395 MS.gene051122:intron 25.0%
!!! AAACCGATTAATTTGTATTG+TGG + chr8.3:70357425-70357444 MS.gene051122:intron 25.0%
!!! TTCAATATTTTGGGTTTAGT+TGG + chr8.3:70358845-70358864 MS.gene051122:intron 25.0%
!!! TTCGGTGTTAATCAATAATT+GGG + chr8.3:70356975-70356994 MS.gene051122:intron 25.0%
!!! TTGTGAAGAGTTTGTTATTA+AGG + chr8.3:70356627-70356646 MS.gene051122:CDS 25.0%
!!! TTTCGGTGTTAATCAATAAT+TGG + chr8.3:70356974-70356993 MS.gene051122:intron 25.0%
!!! TTTTTTATCTCAAACCAAAC+AGG + chr8.3:70359042-70359061 MS.gene051122:intron 25.0%
AACATGCAATGCAAATCAAA+AGG - chr8.3:70357037-70357056 None:intergenic 30.0%
ACAGGAAACTGTTAAATTAG+GGG + chr8.3:70358987-70359006 MS.gene051122:intron 30.0%
AGCTTATTGCATAAACCTAA+TGG - chr8.3:70357273-70357292 None:intergenic 30.0%
ATAATATGGTGCATAATGTC+AGG - chr8.3:70358167-70358186 None:intergenic 30.0%
ATCAACAACTTCTTAGCATA+AGG - chr8.3:70356580-70356599 None:intergenic 30.0%
ATTAGGAATAGCTAATTGGA+AGG + chr8.3:70357797-70357816 MS.gene051122:CDS 30.0%
CTGAATTTCTTCCCTATATT+CGG - chr8.3:70359363-70359382 None:intergenic 30.0%
GATGATATCCATGACATTTA+TGG + chr8.3:70358250-70358269 MS.gene051122:CDS 30.0%
GATTATATATACGGGATGTT+TGG + chr8.3:70356911-70356930 MS.gene051122:CDS 30.0%
TATACACTTCATGAAACCAA+AGG - chr8.3:70359068-70359087 None:intergenic 30.0%
TATCATGATTGAGAATGACA+AGG + chr8.3:70358805-70358824 MS.gene051122:CDS 30.0%
TATGTTATGTGTTTGTCAAG+TGG + chr8.3:70357332-70357351 MS.gene051122:intron 30.0%
TCAATCATGATAACAAACAC+AGG - chr8.3:70358797-70358816 None:intergenic 30.0%
TCATTTGTCTACATATTTGC+AGG + chr8.3:70358212-70358231 MS.gene051122:intron 30.0%
TCCAATTAGCTATTCCTAAT+CGG - chr8.3:70357797-70357816 None:intergenic 30.0%
TGTTCGAATTTGTACTTCAA+GGG - chr8.3:70358522-70358541 None:intergenic 30.0%
TGTTTGGATTATGATTCTAC+TGG + chr8.3:70356424-70356443 MS.gene051122:CDS 30.0%
TTGTTCGAATTTGTACTTCA+AGG - chr8.3:70358523-70358542 None:intergenic 30.0%
!! CGATTAATTTGTATTGTGGT+TGG + chr8.3:70357429-70357448 MS.gene051122:intron 30.0%
!! GGATGAGTTGACTTTTAATT+TGG + chr8.3:70356513-70356532 MS.gene051122:CDS 30.0%
!!! AGTGATTTGGCTTTTTTGTA+TGG + chr8.3:70357389-70357408 MS.gene051122:intron 30.0%
AAGAGCTGTCCTCATTAAAT+TGG + chr8.3:70357671-70357690 MS.gene051122:CDS 35.0%
ACAACATACCCATTGAACTT+GGG - chr8.3:70358382-70358401 None:intergenic 35.0%
ACAAGTATCTGACCGAATAT+AGG + chr8.3:70359348-70359367 MS.gene051122:CDS 35.0%
ACCGATTAGGAATAGCTAAT+TGG + chr8.3:70357793-70357812 MS.gene051122:CDS 35.0%
ACTATCATTCTGTCTGATTC+TGG + chr8.3:70359118-70359137 MS.gene051122:intron 35.0%
AGTAAAGATTCCACTTCTGT+TGG + chr8.3:70358680-70358699 MS.gene051122:CDS 35.0%
ATCGATCAGCCAATTTAATG+AGG - chr8.3:70357683-70357702 None:intergenic 35.0%
ATGCATTTGCAAGCAGAATT+TGG + chr8.3:70358548-70358567 MS.gene051122:CDS 35.0%
ATTAGCTATTCCTAATCGGT+TGG - chr8.3:70357793-70357812 None:intergenic 35.0%
CAAGTATCTGACCGAATATA+GGG + chr8.3:70359349-70359368 MS.gene051122:CDS 35.0%
CAATCAGGCTTGTAAGAATA+TGG - chr8.3:70358761-70358780 None:intergenic 35.0%
GCTTCAAGAATCTAACTGAT+TGG + chr8.3:70357528-70357547 MS.gene051122:intron 35.0%
GGTATGTTGTAGCTCAATAA+TGG + chr8.3:70358392-70358411 MS.gene051122:intron 35.0%
GTTCGAATTTGTACTTCAAG+GGG - chr8.3:70358521-70358540 None:intergenic 35.0%
TACAACATACCCATTGAACT+TGG - chr8.3:70358383-70358402 None:intergenic 35.0%
TATTCTTACAAGCCTGATTG+CGG + chr8.3:70358761-70358780 MS.gene051122:CDS 35.0%
TCCAAACAATGCTGCAAATA+CGG - chr8.3:70356797-70356816 None:intergenic 35.0%
TCGAGTTTGCACAAAATTCT+TGG - chr8.3:70359160-70359179 None:intergenic 35.0%
TTACCTTTCCCTCTTTCATT+TGG + chr8.3:70358032-70358051 MS.gene051122:intron 35.0%
TTCTTCATATGTGCTTCAGA+TGG + chr8.3:70358613-70358632 MS.gene051122:CDS 35.0%
TTGCAATTTGGATCACTTAC+AGG - chr8.3:70359284-70359303 None:intergenic 35.0%
! ATTGTGGTTGGCATTTTTGT+AGG + chr8.3:70357441-70357460 MS.gene051122:intron 35.0%
! CCAAATTGCAAGTTGAAGAT+GGG + chr8.3:70359293-70359312 MS.gene051122:CDS 35.0%
! CTTATCATGTCATTTCTGGA+CGG + chr8.3:70357964-70357983 MS.gene051122:CDS 35.0%
! TCCAAATTGCAAGTTGAAGA+TGG + chr8.3:70359292-70359311 MS.gene051122:CDS 35.0%
! TGGTGATGAAGATGAATTGA+AGG + chr8.3:70356189-70356208 MS.gene051122:CDS 35.0%
! TTGGATGATACTTTTGTGGA+GGG + chr8.3:70356532-70356551 MS.gene051122:CDS 35.0%
! TTTGGAGATTTTTGCACCTT+TGG + chr8.3:70357767-70357786 MS.gene051122:CDS 35.0%
! TTTGGATGATACTTTTGTGG+AGG + chr8.3:70356531-70356550 MS.gene051122:CDS 35.0%
!! ACTGATTGGTATGCTATTTC+AGG + chr8.3:70357542-70357561 MS.gene051122:intron 35.0%
!! AGTACTAGATTTGTTGGAGA+GGG + chr8.3:70359181-70359200 MS.gene051122:CDS 35.0%
!! AGTTGCTGATTTAGTTGAAG+GGG + chr8.3:70356940-70356959 MS.gene051122:CDS 35.0%
!! CCTTTTACTTCGAGTTTTTC+CGG + chr8.3:70356160-70356179 MS.gene051122:CDS 35.0%
!! GAGTTGCTGATTTAGTTGAA+GGG + chr8.3:70356939-70356958 MS.gene051122:CDS 35.0%
!!! AAGGGGTGAGGAATTTTTTT+CGG + chr8.3:70356957-70356976 MS.gene051122:intron 35.0%
AAAGCTCTTTGTGCTGTACA+GGG - chr8.3:70357857-70357876 None:intergenic 40.0%
AACATATAGGTTCCCTCTGA+AGG + chr8.3:70359229-70359248 MS.gene051122:CDS 40.0%
AAGCCTTAGAAGTTGTTCAC+CGG + chr8.3:70358311-70358330 MS.gene051122:CDS 40.0%
AATTCAACAGTAGTTGCTGC+TGG + chr8.3:70356848-70356867 MS.gene051122:CDS 40.0%
AATTTGGATTCGCTGCTCAT+TGG + chr8.3:70358564-70358583 MS.gene051122:CDS 40.0%
AGCTTTCTCAGCTTCACAAA+AGG - chr8.3:70356653-70356672 None:intergenic 40.0%
AGTGACCATCCAAATGAAAG+AGG - chr8.3:70358044-70358063 None:intergenic 40.0%
ATACATTGCCCCAAGTTCAA+TGG + chr8.3:70358370-70358389 MS.gene051122:CDS 40.0%
ATCGACAAATCCAACAGAAG+TGG - chr8.3:70358693-70358712 None:intergenic 40.0%
ATGCTACTACTACACGAAAC+AGG - chr8.3:70356307-70356326 None:intergenic 40.0%
ATGTCTTCCACCAATTGTTC+GGG + chr8.3:70357142-70357161 MS.gene051122:intron 40.0%
ATTCAACAGTAGTTGCTGCT+GGG + chr8.3:70356849-70356868 MS.gene051122:CDS 40.0%
ATTCAGCGAATGTATGATCG+CGG + chr8.3:70359377-70359396 MS.gene051122:CDS 40.0%
ATTCTTACAAGCCTGATTGC+GGG + chr8.3:70358762-70358781 MS.gene051122:CDS 40.0%
CAACATACCCATTGAACTTG+GGG - chr8.3:70358381-70358400 None:intergenic 40.0%
CATCCAAATGAAAGAGGGAA+AGG - chr8.3:70358038-70358057 None:intergenic 40.0%
CCCATCTTCAACTTGCAATT+TGG - chr8.3:70359296-70359315 None:intergenic 40.0%
CCGGAAAAACTCGAAGTAAA+AGG - chr8.3:70356163-70356182 None:intergenic 40.0%
CTCGACAGTACTAGATTTGT+TGG + chr8.3:70359175-70359194 MS.gene051122:CDS 40.0%
CTTTCCCTCTTTCATTTGGA+TGG + chr8.3:70358036-70358055 MS.gene051122:intron 40.0%
GACAGTTATCAGCATGAGAA+GGG - chr8.3:70358739-70358758 None:intergenic 40.0%
GAGAGATCATAGTCCAGTTT+CGG + chr8.3:70356270-70356289 MS.gene051122:CDS 40.0%
GAGGTTTGCAAAGGAAACTT+TGG + chr8.3:70357749-70357768 MS.gene051122:CDS 40.0%
GATGACACTAGATGCATTAC+CGG + chr8.3:70357713-70357732 MS.gene051122:CDS 40.0%
GATGTCTTCCACCAATTGTT+CGG + chr8.3:70357141-70357160 MS.gene051122:intron 40.0%
GCATACAATGTTCCTTGCAA+TGG + chr8.3:70357641-70357660 MS.gene051122:CDS 40.0%
GTGACCATCCAAATGAAAGA+GGG - chr8.3:70358043-70358062 None:intergenic 40.0%
GTTTCGTGTAGTAGTAGCAT+GGG + chr8.3:70356307-70356326 MS.gene051122:CDS 40.0%
TAACCGGTGAACAACTTCTA+AGG - chr8.3:70358317-70358336 None:intergenic 40.0%
TACATTGCCCCAAGTTCAAT+GGG + chr8.3:70358371-70358390 MS.gene051122:CDS 40.0%
TATTCGGTCAGATACTTGTC+AGG - chr8.3:70359347-70359366 None:intergenic 40.0%
TCCGTATTTGCAGCATTGTT+TGG + chr8.3:70356793-70356812 MS.gene051122:CDS 40.0%
TGTTTCGTGTAGTAGTAGCA+TGG + chr8.3:70356306-70356325 MS.gene051122:CDS 40.0%
TTATCAATCTCTGCACACTG+TGG + chr8.3:70358475-70358494 MS.gene051122:CDS 40.0%
TTGCAAGGAACATTGTATGC+AGG - chr8.3:70357641-70357660 None:intergenic 40.0%
TTTGGAAACTGCTGTGTTGT+TGG + chr8.3:70356811-70356830 MS.gene051122:CDS 40.0%
! GCTGTAGGTTGACAACATAT+AGG + chr8.3:70359216-70359235 MS.gene051122:CDS 40.0%
! TAGAAGTTGTTCACCGGTTA+TGG + chr8.3:70358317-70358336 MS.gene051122:CDS 40.0%
! TCATTTTCACCGACGAAGTT+TGG + chr8.3:70356235-70356254 MS.gene051122:CDS 40.0%
! TCTACTGGTGTTAGATTACG+CGG + chr8.3:70356439-70356458 MS.gene051122:CDS 40.0%
! TGCTTTGGGTTCTTCTTGTT+TGG + chr8.3:70356408-70356427 MS.gene051122:CDS 40.0%
!! CAGTACTAGATTTGTTGGAG+AGG + chr8.3:70359180-70359199 MS.gene051122:CDS 40.0%
!! GGAGTTGCTGATTTAGTTGA+AGG + chr8.3:70356938-70356957 MS.gene051122:CDS 40.0%
!! GTGTTTGTTTTCATCTCCGA+CGG + chr8.3:70356120-70356139 MS.gene051122:CDS 40.0%
!! TTTACTTCGAGTTTTTCCGG+TGG + chr8.3:70356163-70356182 MS.gene051122:CDS 40.0%
AATTGTTCGGGGTACATCTC+TGG + chr8.3:70357154-70357173 MS.gene051122:intron 45.0%
ACAGGCTTGTGATTCAGTCT+TGG - chr8.3:70359266-70359285 None:intergenic 45.0%
ACTGAGTCACTTAAGCAAGC+TGG + chr8.3:70357572-70357591 MS.gene051122:CDS 45.0%
AGAGATGTACCCCGAACAAT+TGG - chr8.3:70357155-70357174 None:intergenic 45.0%
AGAGCTTTCGTCAAAGCTTG+TGG + chr8.3:70357869-70357888 MS.gene051122:CDS 45.0%
AGATACTTGTCAGGTATGGC+TGG - chr8.3:70359338-70359357 None:intergenic 45.0%
AGGATCTAGATCTTCGTCAC+CGG + chr8.3:70356042-70356061 MS.gene051122:CDS 45.0%
ATGTGCTTCAGATGGTTGAG+TGG + chr8.3:70358621-70358640 MS.gene051122:CDS 45.0%
CAAGATCCACCAAACTTCGT+CGG - chr8.3:70356247-70356266 None:intergenic 45.0%
CAAGGAACATTGTATGCAGG+CGG - chr8.3:70357638-70357657 None:intergenic 45.0%
CATGAAACCAAAGGCCTGTT+TGG - chr8.3:70359059-70359078 None:intergenic 45.0%
CTGATTTAGTTGAAGGGGTG+AGG + chr8.3:70356945-70356964 MS.gene051122:intron 45.0%
GAAAGCTCTTTGTGCTGTAC+AGG - chr8.3:70357858-70357877 None:intergenic 45.0%
GAAGCTGAGAAAGCTCATAG+AGG + chr8.3:70356658-70356677 MS.gene051122:CDS 45.0%
GAGCAAGCACTCAAAGATGA+AGG + chr8.3:70357936-70357955 MS.gene051122:CDS 45.0%
GCCTCAATTCTTCCTTCAGA+GGG - chr8.3:70359244-70359263 None:intergenic 45.0%
GCTGCGCTTGATTGTTGATA+AGG + chr8.3:70358273-70358292 MS.gene051122:CDS 45.0%
GGACACTGAAAAACCGAAAC+TGG - chr8.3:70356286-70356305 None:intergenic 45.0%
GGACAGTTATCAGCATGAGA+AGG - chr8.3:70358740-70358759 None:intergenic 45.0%
GGGCTAACTGTATCAAGCAT+GGG + chr8.3:70359398-70359417 MS.gene051122:CDS 45.0%
GGTCAGATACTTGTCAGGTA+TGG - chr8.3:70359342-70359361 None:intergenic 45.0%
GGTGTAGAACACACACTACT+CGG - chr8.3:70355995-70356014 None:intergenic 45.0%
GTACCGGAACAATTCGATCA+GGG + chr8.3:70356341-70356360 MS.gene051122:CDS 45.0%
TCTCAAACCAAACAGGCCTT+TGG + chr8.3:70359049-70359068 MS.gene051122:intron 45.0%
TGAGAAAGCTCATAGAGGAC+AGG + chr8.3:70356663-70356682 MS.gene051122:CDS 45.0%
TGTCTTCCACCAATTGTTCG+GGG + chr8.3:70357143-70357162 MS.gene051122:intron 45.0%
TGTGCTTCAGATGGTTGAGT+GGG + chr8.3:70358622-70358641 MS.gene051122:CDS 45.0%
TGTTTGTAGATGCGAGCTAG+TGG + chr8.3:70356767-70356786 MS.gene051122:intron 45.0%
TTCAGCGAATGTATGATCGC+GGG + chr8.3:70359378-70359397 MS.gene051122:CDS 45.0%
! ACTTTTGTGGAGGGTTGTGT+TGG + chr8.3:70356541-70356560 MS.gene051122:CDS 45.0%
! ATATACGGGATGTTTGGAGC+TGG + chr8.3:70356917-70356936 MS.gene051122:CDS 45.0%
! ATTCCTAATCGGTTGGCCAA+AGG - chr8.3:70357786-70357805 None:intergenic 45.0%
! GCGCTTGATTGTTGATAAGG+AGG + chr8.3:70358276-70358295 MS.gene051122:CDS 45.0%
! TCCCTCTGAAGGAAGAATTG+AGG + chr8.3:70359240-70359259 MS.gene051122:CDS 45.0%
! TTTTCACCGACGAAGTTTGG+TGG + chr8.3:70356238-70356257 MS.gene051122:CDS 45.0%
!! CTAGATTTGTTGGAGAGGGT+CGG + chr8.3:70359185-70359204 MS.gene051122:CDS 45.0%
!! GCTGTGTTGTTGGCTTTGAT+CGG + chr8.3:70356821-70356840 MS.gene051122:CDS 45.0%
!! GGGTTTGTGAGAAGTGCTTT+GGG + chr8.3:70356394-70356413 MS.gene051122:CDS 45.0%
!! GGTGAATTTGATGGTGTTGG+TGG + chr8.3:70356475-70356494 MS.gene051122:CDS 45.0%
!! GGTGGTGAATTTGATGGTGT+TGG + chr8.3:70356472-70356491 MS.gene051122:CDS 45.0%
!! TAGATTTGTTGGAGAGGGTC+GGG + chr8.3:70359186-70359205 MS.gene051122:CDS 45.0%
!! TGGGTTTGTGAGAAGTGCTT+TGG + chr8.3:70356393-70356412 MS.gene051122:CDS 45.0%
!! TGGTGGTGATTCTGGAATTG+TGG + chr8.3:70356492-70356511 MS.gene051122:CDS 45.0%
!! TTTGTTTTCATCTCCGACGG+TGG + chr8.3:70356123-70356142 MS.gene051122:CDS 45.0%
!!! ACTGGTGGTGGGTTTTTTGA+TGG + chr8.3:70356373-70356392 MS.gene051122:CDS 45.0%
!!! CTGGTGGTGGGTTTTTTGAT+GGG + chr8.3:70356374-70356393 MS.gene051122:CDS 45.0%
ACGTCTGGGAAATCGGTGAT+GGG + chr8.3:70356088-70356107 MS.gene051122:CDS 50.0%
AGCGCAGCCCATAAATGTCA+TGG - chr8.3:70358261-70358280 None:intergenic 50.0%
ATCTCTGCACACTGTGGTGA+TGG + chr8.3:70358481-70358500 MS.gene051122:CDS 50.0%
ATCTTCATCACCACCACCAC+CGG - chr8.3:70356182-70356201 None:intergenic 50.0%
CAAGCAGCAGAGGTTTGCAA+AGG + chr8.3:70357740-70357759 MS.gene051122:CDS 50.0%
CATGCACCTCAGACCATAAC+CGG - chr8.3:70358333-70358352 None:intergenic 50.0%
CCTCCCTGATCGAATTGTTC+CGG - chr8.3:70356347-70356366 None:intergenic 50.0%
CGGAACAATTCGATCAGGGA+GGG + chr8.3:70356345-70356364 MS.gene051122:CDS 50.0%
CGGGCTAACTGTATCAAGCA+TGG + chr8.3:70359397-70359416 MS.gene051122:CDS 50.0%
CTCTTGCATCTGCCATTGCA+AGG - chr8.3:70357656-70357675 None:intergenic 50.0%
CTTTGCAAACCTCTGCTGCT+TGG - chr8.3:70357742-70357761 None:intergenic 50.0%
GATGTACCCCGAACAATTGG+TGG - chr8.3:70357152-70357171 None:intergenic 50.0%
GCATGAGAAGGGAACTTGCA+AGG - chr8.3:70358728-70358747 None:intergenic 50.0%
GGAACAATTCGATCAGGGAG+GGG + chr8.3:70356346-70356365 MS.gene051122:CDS 50.0%
GGCCTCAATTCTTCCTTCAG+AGG - chr8.3:70359245-70359264 None:intergenic 50.0%
GTAGAACACACACTACTCGG+TGG - chr8.3:70355992-70356011 None:intergenic 50.0%
TACGTCTGGGAAATCGGTGA+TGG + chr8.3:70356087-70356106 MS.gene051122:CDS 50.0%
TACTGCTACTGCAAGCAGCA+TGG + chr8.3:70359424-70359443 MS.gene051122:CDS 50.0%
TCTCTGCACACTGTGGTGAT+GGG + chr8.3:70358482-70358501 MS.gene051122:CDS 50.0%
TGAGAAGGGAACTTGCAAGG+TGG - chr8.3:70358725-70358744 None:intergenic 50.0%
TGTAGTAGTAGCATGGGTGC+CGG + chr8.3:70356313-70356332 MS.gene051122:CDS 50.0%
TTGGATTCGCTGCTCATTGG+AGG + chr8.3:70358567-70358586 MS.gene051122:CDS 50.0%
! ACTGGTGTTAGATTACGCGG+TGG + chr8.3:70356442-70356461 MS.gene051122:CDS 50.0%
! CGACGAAGTTTGGTGGATCT+TGG + chr8.3:70356245-70356264 MS.gene051122:CDS 50.0%
! GGTACCGGAACAATTCGATC+AGG + chr8.3:70356340-70356359 MS.gene051122:CDS 50.0%
! GGTTATGGTCTGAGGTGCAT+GGG + chr8.3:70358332-70358351 MS.gene051122:CDS 50.0%
! TGTTCACCGGTTATGGTCTG+AGG + chr8.3:70358324-70358343 MS.gene051122:CDS 50.0%
!! ACTTCGAGTTTTTCCGGTGG+TGG + chr8.3:70356166-70356185 MS.gene051122:CDS 50.0%
!! GATGGTGTTGGTGGTGATTC+TGG + chr8.3:70356484-70356503 MS.gene051122:CDS 50.0%
!! GGTGGTGGTGGTGAATTTGA+TGG + chr8.3:70356466-70356485 MS.gene051122:CDS 50.0%
AATTGTTCCGGTACCCGCAC+CGG - chr8.3:70356335-70356354 None:intergenic 55.0%
ACTCATTGCTTCGCACTGCC+AGG - chr8.3:70358663-70358682 None:intergenic 55.0%
ATCTTCGTCACCGGCGTCTA+CGG + chr8.3:70356051-70356070 MS.gene051122:CDS 55.0%
CCGGAACAATTCGATCAGGG+AGG + chr8.3:70356344-70356363 MS.gene051122:CDS 55.0%
GCACCTTTGGCCAACCGATT+AGG + chr8.3:70357780-70357799 MS.gene051122:CDS 55.0%
GCTACTGCAAGCAGCATGGT+TGG + chr8.3:70359428-70359447 MS.gene051122:CDS 55.0%
GGCGTCTACGTCTGGGAAAT+CGG + chr8.3:70356081-70356100 MS.gene051122:CDS 55.0%
GGTGTTAGATTACGCGGTGG+TGG + chr8.3:70356445-70356464 MS.gene051122:CDS 55.0%
TTACAAGCCTGATTGCGGGC+AGG + chr8.3:70358766-70358785 MS.gene051122:CDS 55.0%
! AACCTCTGCTGCTTGGCAAC+CGG - chr8.3:70357735-70357754 None:intergenic 55.0%
! ACATGCTGCTTCACCACCGT+CGG - chr8.3:70356139-70356158 None:intergenic 55.0%
! AGATGGTTGAGTGGGCTCGA+TGG + chr8.3:70358630-70358649 MS.gene051122:CDS 55.0%
! CGCTGCTCATTGGAGGTACA+AGG + chr8.3:70358574-70358593 MS.gene051122:CDS 55.0%
! CGGTTATGGTCTGAGGTGCA+TGG + chr8.3:70358331-70358350 MS.gene051122:CDS 55.0%
! GATGGTTGAGTGGGCTCGAT+GGG + chr8.3:70358631-70358650 MS.gene051122:CDS 55.0%
! GTTAGATTACGCGGTGGTGG+TGG + chr8.3:70356448-70356467 MS.gene051122:CDS 55.0%
!! CACACTGTGGTGATGGGTGA+AGG + chr8.3:70358488-70358507 MS.gene051122:CDS 55.0%
!! TCGAGTTTTTCCGGTGGTGG+TGG + chr8.3:70356169-70356188 MS.gene051122:CDS 55.0%
!! TCTGGGAAATCGGTGATGGG+TGG + chr8.3:70356091-70356110 MS.gene051122:CDS 55.0%
!! TGTGGTGATGGGTGAAGGCA+AGG + chr8.3:70358493-70358512 MS.gene051122:CDS 55.0%
AAGCCTGATTGCGGGCAGGA+TGG + chr8.3:70358770-70358789 MS.gene051122:CDS 60.0%
! CGATCAGGGAGGGGAAGTAC+TGG + chr8.3:70356355-70356374 MS.gene051122:CDS 60.0%
! TACCGGTTGCCAAGCAGCAG+AGG + chr8.3:70357730-70357749 MS.gene051122:CDS 60.0%
!! AGATTACGCGGTGGTGGTGG+TGG + chr8.3:70356451-70356470 MS.gene051122:CDS 60.0%
!! GGAGGGGAAGTACTGGTGGT+GGG + chr8.3:70356362-70356381 MS.gene051122:CDS 60.0%
!! TAGTAGCATGGGTGCCGGTG+CGG + chr8.3:70356318-70356337 MS.gene051122:CDS 60.0%
!! TCAGGGAGGGGAAGTACTGG+TGG + chr8.3:70356358-70356377 MS.gene051122:CDS 60.0%
GGTCCATCCTGCCCGCAATC+AGG - chr8.3:70358776-70358795 None:intergenic 65.0%
!! AGTAGCATGGGTGCCGGTGC+GGG + chr8.3:70356319-70356338 MS.gene051122:CDS 65.0%
!! GGGAGGGGAAGTACTGGTGG+TGG + chr8.3:70356361-70356380 MS.gene051122:CDS 65.0%
!! GGGCTCGATGGGTTGTCACC+TGG + chr8.3:70358642-70358661 MS.gene051122:CDS 65.0%
!! TTACGCGGTGGTGGTGGTGG+TGG + chr8.3:70356454-70356473 MS.gene051122:CDS 65.0%
CGACGGCGGCGTCTACGTCT+GGG + chr8.3:70356074-70356093 MS.gene051122:CDS 70.0%
GGGTCGGGCGAGCAAGCTGT+AGG + chr8.3:70359201-70359220 MS.gene051122:CDS 70.0%
GTCACCGGCGTCTACGGCGA+CGG + chr8.3:70356057-70356076 MS.gene051122:CDS 70.0%
!! ATGGGTGCCGGTGCGGGTAC+CGG + chr8.3:70356325-70356344 MS.gene051122:CDS 70.0%
ACCGGCGTCTACGGCGACGG+CGG + chr8.3:70356060-70356079 MS.gene051122:CDS 75.0%
GCGACGGCGGCGTCTACGTC+TGG + chr8.3:70356073-70356092 MS.gene051122:CDS 75.0%
! GCCGCCGTCGCCGTAGACGC+CGG - chr8.3:70356064-70356083 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 70355956 70359460 70355956 ID=MS.gene051122
chr8.3 mRNA 70355956 70359460 70355956 ID=MS.gene051122.t1;Parent=MS.gene051122
chr8.3 exon 70355956 70356684 70355956 ID=MS.gene051122.t1.exon1;Parent=MS.gene051122.t1
chr8.3 CDS 70355956 70356684 70355956 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
chr8.3 exon 70356776 70356961 70356776 ID=MS.gene051122.t1.exon2;Parent=MS.gene051122.t1
chr8.3 CDS 70356776 70356961 70356776 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
chr8.3 exon 70357564 70358024 70357564 ID=MS.gene051122.t1.exon3;Parent=MS.gene051122.t1
chr8.3 CDS 70357564 70358024 70357564 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
chr8.3 exon 70358234 70358392 70358234 ID=MS.gene051122.t1.exon4;Parent=MS.gene051122.t1
chr8.3 CDS 70358234 70358392 70358234 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
chr8.3 exon 70358475 70358826 70358475 ID=MS.gene051122.t1.exon5;Parent=MS.gene051122.t1
chr8.3 CDS 70358475 70358826 70358475 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
chr8.3 exon 70359149 70359460 70359149 ID=MS.gene051122.t1.exon6;Parent=MS.gene051122.t1
chr8.3 CDS 70359149 70359460 70359149 ID=cds.MS.gene051122.t1;Parent=MS.gene051122.t1
Gene Sequence

>MS.gene051122

ATGGCGGTTTCAACTATAGCGTTATACGCGAGTCCACCGAGTAGTGTGTGTTCTACACCGCATCAGATTAACTATGATTTCGAATTAGGATCTAGATCTTCGTCACCGGCGTCTACGGCGACGGCGGCGTCTACGTCTGGGAAATCGGTGATGGGTGGTTTATCGTGTTTGTTTTCATCTCCGACGGTGGTGAAGCAGCATGTTCCTTTTACTTCGAGTTTTTCCGGTGGTGGTGGTGATGAAGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACGAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAGTAGCATGGGTGCCGGTGCGGGTACCGGAACAATTCGATCAGGGAGGGGAAGTACTGGTGGTGGGTTTTTTGATGGGTTTGTGAGAAGTGCTTTGGGTTCTTCTTGTTTGGATTATGATTCTACTGGTGTTAGATTACGCGGTGGTGGTGGTGGTGGTGAATTTGATGGTGTTGGTGGTGATTCTGGAATTGTGGATGAGTTGACTTTTAATTTGGATGATACTTTTGTGGAGGGTTGTGTTGGAATTGAGATTGAGCCTTATGCTAAGAAGTTGTTGATGAATGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGGTGAATTGAGCTTCATGTTTATGTGTGTTTGTGATTTTTGGTTTTGATTATTTGTGTCAATGATTTTGATGAATTGTTTGTTTGTTTGTAGATGCGAGCTAGTGGCGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTGTTGGCTTTGATCGGTGCGAATTCAACAGTAGTTGCTGCTGGGCTTTTGCATGATACAGTTGATGATGCATTTCTTACTTATGATTATATATACGGGATGTTTGGAGCTGGAGTTGCTGATTTAGTTGAAGGGGTGAGGAATTTTTTTCGGTGTTAATCAATAATTGGGTGTGATTTAAGATTAAGATGATTGATGGTATTTGATCCTTTTGATTTGCATTGCATGTTTTTTTTTTTTGTTGACATTTGAATCAGTCTTTGCAATTGAGTTTGTTACTGAATTTTATGCTTTAGATCTAGTGTTAATTACTCGATGTCTTCCACCAATTGTTCGGGGTACATCTCTGGAATTGTTGTTGTCGTGTCTCTACATTGACTATTGAGCTGTTTTCCTCTTGATGTTTGTAGTTATTATTGTATTGAAGTAATGACAATTCAAATCCATTAGGTTTATGCAATAAGCTTTGTTCACCTAGCTTTTTATGATAGATTTGTTGCGTTAATATGTTATGTGTTTGTCAAGTGGCAACATTTTATTTTTATTCAATTTTTGTATTGCTAGTGATTTGGCTTTTTTGTATGGATGTATAATTATTAAACCGATTAATTTGTATTGTGGTTGGCATTTTTGTAGGAACGTATAATGTATATTACAAATTAATGAATTCATTTATTTTTTTTGAATTTTTATAGTTTGTTGCTTCAAGAATCTAACTGATTGGTATGCTATTTCAGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGCCTGCATACAATGTTCCTTGCAATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTACCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGATTAGGAATAGCTAATTGGAAGGAACAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGCACAAAGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGACGCAATGATTGCTTCTGCAATAGAAAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCTTATCATGTCATTTCTGGACGGCACAAGAGCTTGTATAGCGTTTATTGCAAAATATTAAAGTACGTTTTACCTTTCCCTCTTTCATTTGGATGGTCACTTATATAATTTGCGTCGCTATATTTATGTGAATGAAACTATTAATGAAACAAACTGCTTTGAATTTAAAACTACTGATGTAGAAGTATAGCATCATCTTCGCCTGACATTATGCACCATATTATTTGCACACTTCAAATTCTCAATTATTCATTTGTCTACATATTTGCAGGAAAAAACTAAGCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGATAAGGAGGAAGATTGTTACAAAGCCTTAGAAGTTGTTCACCGGTTATGGTCTGAGGTGCATGGGAAACTGAAAGATTACATACATTGCCCCAAGTTCAATGGGTATGTTGTAGCTCAATAATGGTAGTGTACACTTGAAAGTGACCGTCTCTATATCATCTGATTTATATTTTGTAATTTGCAGTTATCAATCTCTGCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGAACAAAAGATATGCATTTGCAAGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAACTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATTTGTCGATTCAATCAAGCCACCTTGCAAGTTCCCTTCTCATGCTGATAACTGTCCATATTCTTACAAGCCTGATTGCGGGCAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGGTATGTGCTAGAATTATGTTCAATATTTTGGGTTTAGTTGGTCTGCAAAAAAAGTTACCTGCTTTCATTTCATTATTTATTTTCAATTTTAAAACTGTCCTTTGTTTTAACACTTGTTTTCAAAGATATGTATGTTTTACGTTTGTACAGATATTTGAAAACAGGAAACTGTTAAATTAGGGGTAGTTTTGCAGTTAAAAGTAAAAGCAATTTTTTTTTTTATCTCAAACCAAACAGGCCTTTGGTTTCATGAAGTGTATAATCTTAAGCTGTGTTTGAACGTCTGTATTAACTATCATTCTGTCTGATTCTGGATGTGCAGATGTCTGTCCAAGAATTTTGTGCAAACTCGACAGTACTAGATTTGTTGGAGAGGGTCGGGCGAGCAAGCTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGACTGAATCACAAGCCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGATCGAGCTTACACCAGCCATACCTGACAAGTATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTGA

Protein sequence

>MS.gene051122.t1

MAVSTIALYASPPSSVCSTPHQINYDFELGSRSSSPASTATAASTSGKSVMGGLSCLFSSPTVVKQHVPFTSSFSGGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSSSMGAGAGTGTIRSGRGSTGGGFFDGFVRSALGSSCLDYDSTGVRLRGGGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLSIDDIHDIYGLRLIVDKEEDCYKALEVVHRLWSEVHGKLKDYIHCPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGFVDSIKPPCKFPSHADNCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGTTATASSMVGTS