AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069997

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069997.t1 MTR_5g024340 65.556 360 117 3 26 384 23 376 2.20e-173 488
MS.gene069997.t1 MTR_1g086350 52.273 352 137 5 59 385 24 369 6.86e-122 357
MS.gene069997.t1 MTR_3g107880 53.509 342 148 4 47 385 44 377 3.37e-121 356
MS.gene069997.t1 MTR_1g086350 52.450 347 134 5 64 385 45 385 3.65e-121 356
MS.gene069997.t1 MTR_3g107880 53.801 342 146 5 47 385 44 376 3.32e-120 353
MS.gene069997.t1 MTR_3g107880 54.747 316 140 2 73 385 4 319 4.11e-120 351
MS.gene069997.t1 MTR_4g116420 52.500 320 143 4 72 385 67 383 4.54e-114 338
MS.gene069997.t1 MTR_2g033000 52.733 311 134 3 88 385 56 366 3.41e-110 327
MS.gene069997.t1 MTR_4g123080 53.055 311 133 2 88 385 51 361 5.05e-110 327
MS.gene069997.t1 MTR_4g123080 53.055 311 133 2 88 385 69 379 8.30e-110 327
MS.gene069997.t1 MTR_1g086350 53.650 274 101 4 132 385 16 283 4.20e-97 291
MS.gene069997.t1 MTR_4g123080 54.140 157 69 1 232 385 110 266 9.09e-51 171
MS.gene069997.t1 MTR_1g115570 40.435 230 121 7 131 357 125 341 7.82e-44 155
MS.gene069997.t1 MTR_1g014640 37.828 267 142 8 92 353 76 323 4.88e-43 153
MS.gene069997.t1 MTR_1g013400 37.828 267 142 8 92 353 76 323 4.88e-43 153
MS.gene069997.t1 MTR_3g105730 39.648 227 123 5 131 353 64 280 1.04e-42 151
MS.gene069997.t1 MTR_3g105730 39.648 227 123 5 131 353 42 258 1.35e-42 150
MS.gene069997.t1 MTR_1g050520 34.982 283 151 8 88 355 382 646 1.19e-40 152
MS.gene069997.t1 MTR_2g008850 37.402 254 133 7 106 353 1 234 2.19e-40 143
MS.gene069997.t1 MTR_2g008850 36.431 269 144 8 92 353 32 280 7.14e-40 143
MS.gene069997.t1 MTR_5g071550 35.094 265 139 7 99 351 129 372 9.20e-40 145
MS.gene069997.t1 MTR_4g094208 33.688 282 157 7 80 353 17 276 3.29e-39 141
MS.gene069997.t1 MTR_5g063940 35.433 254 138 7 106 353 1 234 1.03e-38 139
MS.gene069997.t1 MTR_3g074610 36.681 229 127 5 131 353 65 281 1.78e-38 139
MS.gene069997.t1 MTR_5g063940 35.433 254 138 7 106 353 48 281 5.73e-38 138
MS.gene069997.t1 MTR_6g081850 33.333 330 175 12 54 356 10 321 1.20e-36 135
MS.gene069997.t1 MTR_1g014190 28.302 318 162 8 92 353 22 329 1.39e-36 136
MS.gene069997.t1 MTR_1g014190 28.302 318 162 8 92 353 60 367 3.02e-36 136
MS.gene069997.t1 MTR_3g091060 36.364 231 131 6 132 357 125 344 4.89e-36 135
MS.gene069997.t1 MTR_3g464700 36.161 224 120 6 99 316 93 299 3.41e-35 132
MS.gene069997.t1 MTR_3g105880 28.616 318 161 8 92 353 22 329 7.67e-35 132
MS.gene069997.t1 MTR_3g464650 32.950 261 150 7 99 351 69 312 8.75e-35 130
MS.gene069997.t1 MTR_4g125810 28.977 352 186 10 38 351 176 501 4.45e-33 129
MS.gene069997.t1 MTR_4g007440 27.987 318 164 7 91 353 21 328 6.29e-33 127
MS.gene069997.t1 MTR_5g071550 35.683 227 115 6 99 315 129 334 1.12e-32 126
MS.gene069997.t1 MTR_3g105880 28.571 280 139 6 92 320 22 291 1.76e-32 124
MS.gene069997.t1 MTR_8g463130 34.934 229 131 7 131 353 65 281 3.21e-32 123
MS.gene069997.t1 MTR_8g463130 34.934 229 131 7 131 353 37 253 3.32e-32 122
MS.gene069997.t1 MTR_2g078760 35.776 232 121 8 131 351 37 251 6.23e-32 121
MS.gene069997.t1 MTR_2g078760 35.776 232 121 8 131 351 116 330 2.28e-31 122
MS.gene069997.t1 MTR_1g015110 33.588 262 130 9 132 355 290 545 2.87e-31 125
MS.gene069997.t1 MTR_2g040500 30.351 313 149 10 101 351 228 533 8.13e-30 120
MS.gene069997.t1 MTR_3g104710 34.884 258 124 9 132 351 286 537 1.39e-29 120
MS.gene069997.t1 MTR_3g491830 28.402 338 180 10 54 350 30 346 2.18e-29 117
MS.gene069997.t1 MTR_4g094542 31.878 229 137 6 131 353 149 364 1.27e-28 115
MS.gene069997.t1 MTR_1g028300 33.213 277 152 9 95 351 114 377 3.50e-27 111
MS.gene069997.t1 MTR_3g068200 32.308 260 133 9 129 351 120 373 2.15e-26 109
MS.gene069997.t1 MTR_8g102550 29.524 315 177 9 75 366 108 400 3.90e-26 108
MS.gene069997.t1 MTR_3g115900 87.324 71 7 1 1 71 9 77 5.23e-26 100
MS.gene069997.t1 MTR_5g009370 33.473 239 130 8 101 323 60 285 8.11e-25 103
MS.gene069997.t1 MTR_2g078760 33.516 182 107 5 131 306 116 289 1.22e-22 97.1
MS.gene069997.t1 MTR_1g067210 30.000 290 136 8 122 351 66 348 2.65e-22 97.4
MS.gene069997.t1 MTR_7g100240 28.622 283 133 9 130 351 69 343 2.83e-21 94.7
MS.gene069997.t1 MTR_3g032700 30.000 230 112 9 132 318 68 291 3.29e-21 95.1
MS.gene069997.t1 MTR_5g080680 32.353 204 114 5 132 317 132 329 7.94e-21 93.6
MS.gene069997.t1 MTR_1g116260 28.028 289 141 9 130 358 78 359 1.00e-20 93.2
MS.gene069997.t1 MTR_3g032660 29.310 232 115 9 130 318 66 291 1.13e-20 93.6
MS.gene069997.t1 MTR_4g118340 29.008 262 135 10 132 351 86 338 1.38e-20 92.8
MS.gene069997.t1 MTR_3g105730 40.336 119 70 1 131 248 64 182 2.08e-20 89.4
MS.gene069997.t1 MTR_7g090530 27.922 308 127 14 132 364 69 356 1.66e-19 90.1
MS.gene069997.t1 MTR_5g071550 36.184 152 76 4 99 244 129 265 1.86e-19 88.2
MS.gene069997.t1 MTR_2g033910 26.471 306 157 10 130 373 73 372 2.25e-19 89.0
MS.gene069997.t1 MTR_7g090550 28.736 261 131 12 132 345 70 322 5.86e-19 88.6
MS.gene069997.t1 MTR_0015s0140 28.049 246 134 8 130 338 77 316 2.55e-18 86.3
MS.gene069997.t1 MTR_8g074930 26.299 308 147 12 130 369 77 372 3.29e-18 85.9
MS.gene069997.t1 MTR_2g020970 29.181 281 155 11 132 375 87 360 3.81e-18 85.5
MS.gene069997.t1 MTR_4g120410 28.467 274 146 9 132 360 91 359 5.05e-18 85.1
MS.gene069997.t1 MTR_7g080170 34.545 165 84 4 168 313 74 233 5.28e-18 85.1
MS.gene069997.t1 MTR_1g016620 30.702 228 112 8 130 316 66 288 6.61e-18 84.3
MS.gene069997.t1 MTR_2g020970 29.961 257 139 9 132 351 87 339 1.23e-17 84.3
MS.gene069997.t1 MTR_7g080170 34.545 165 84 4 168 313 182 341 1.53e-17 84.3
MS.gene069997.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 2.88e-17 84.3
MS.gene069997.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 2.91e-17 84.3
MS.gene069997.t1 MTR_7g081020 26.897 290 147 9 130 360 74 357 6.15e-17 82.0
MS.gene069997.t1 MTR_2g435550 28.674 279 137 11 134 361 94 361 7.25e-17 81.6
MS.gene069997.t1 MTR_2g435550 28.674 279 137 11 134 361 80 347 8.62e-17 81.3
MS.gene069997.t1 MTR_1g112840 26.846 298 158 11 130 369 79 374 9.86e-17 81.6
MS.gene069997.t1 MTR_1g106855 28.873 284 136 14 129 351 57 335 2.31e-16 80.1
MS.gene069997.t1 MTR_1g106855 30.435 230 120 8 129 318 57 286 6.64e-16 77.8
MS.gene069997.t1 MTR_2g435550 31.111 225 108 9 134 316 94 313 1.79e-15 77.8
MS.gene069997.t1 MTR_7g021530 32.749 171 87 6 169 316 113 278 3.92e-15 76.3
MS.gene069997.t1 MTR_7g081020 27.848 237 124 9 130 327 74 302 1.26e-14 74.7
MS.gene069997.t1 MTR_7g021530 32.558 172 84 6 169 315 163 327 1.43e-14 75.1
MS.gene069997.t1 MTR_7g060770 25.000 248 142 6 131 336 262 507 2.14e-14 75.1
MS.gene069997.t1 MTR_7g021530 32.558 172 84 6 169 315 204 368 2.31e-14 74.7
MS.gene069997.t1 MTR_3g032590 32.278 158 73 7 192 318 143 297 3.81e-14 73.9
MS.gene069997.t1 MTR_4g113480 23.904 251 148 8 132 347 74 316 7.33e-14 73.6
MS.gene069997.t1 MTR_2g090190 28.333 240 109 9 132 315 90 322 8.14e-14 73.2
MS.gene069997.t1 MTR_1g110210 27.206 272 146 14 131 372 67 316 1.15e-13 71.6
MS.gene069997.t1 MTR_4g013295 26.950 282 138 13 132 357 78 347 1.89e-13 71.2
MS.gene069997.t1 MTR_4g037470 27.857 280 127 13 95 315 66 329 2.12e-13 71.6
MS.gene069997.t1 MTR_8g074930 28.205 234 104 9 192 369 35 260 2.44e-13 70.1
MS.gene069997.t1 MTR_4g037470 28.750 240 111 10 132 316 105 339 3.81e-13 70.9
MS.gene069997.t1 MTR_5g005810 27.309 249 155 9 127 353 327 571 4.79e-13 70.9
MS.gene069997.t1 MTR_0015s0140 29.545 176 89 6 192 338 93 262 5.21e-13 69.7
MS.gene069997.t1 MTR_1g083690 31.383 188 95 6 191 353 172 350 6.76e-13 69.7
MS.gene069997.t1 MTR_4g094208 29.651 172 106 4 80 248 17 176 1.03e-12 67.4
MS.gene069997.t1 MTR_5g080680 32.237 152 85 4 132 265 132 283 1.52e-12 67.8
MS.gene069997.t1 MTR_2g078760 33.065 124 70 4 131 248 116 232 1.07e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069997.t1 AT2G33700 70.725 386 101 6 3 385 1 377 0.0 553
MS.gene069997.t1 AT3G51470 66.011 356 106 3 29 384 18 358 3.26e-170 479
MS.gene069997.t1 AT3G51470 71.061 311 85 1 74 384 9 314 5.66e-165 464
MS.gene069997.t1 AT2G25620 52.738 347 150 5 46 385 49 388 3.18e-118 348
MS.gene069997.t1 AT2G25620 52.738 347 150 5 46 385 49 388 3.18e-118 348
MS.gene069997.t1 AT3G62260 48.045 358 164 4 50 385 26 383 9.89e-110 327
MS.gene069997.t1 AT3G62260 48.179 357 164 4 50 385 26 382 2.28e-109 326
MS.gene069997.t1 AT1G48040 46.921 341 154 4 70 384 41 380 7.22e-102 306
MS.gene069997.t1 AT3G62260 52.218 293 127 3 106 385 1 293 6.70e-101 301
MS.gene069997.t1 AT3G17250 49.375 320 140 8 83 385 107 421 4.73e-98 298
MS.gene069997.t1 AT5G10740 39.326 267 138 8 92 353 32 279 1.01e-46 163
MS.gene069997.t1 AT5G10740 39.326 267 138 8 92 353 32 279 1.01e-46 163
MS.gene069997.t1 AT4G31750 37.288 295 155 9 72 361 18 287 1.15e-44 157
MS.gene069997.t1 AT4G31750 37.288 295 155 9 72 361 18 287 1.15e-44 157
MS.gene069997.t1 AT4G31750 37.288 295 155 9 72 361 18 287 1.34e-44 156
MS.gene069997.t1 AT1G43900 37.407 270 138 10 92 353 122 368 4.16e-43 154
MS.gene069997.t1 AT5G24940 40.708 226 120 6 132 353 64 279 6.14e-43 155
MS.gene069997.t1 AT5G53140 34.211 266 153 6 95 356 103 350 1.03e-41 152
MS.gene069997.t1 AT5G53140 34.211 266 153 6 95 356 103 350 1.03e-41 152
MS.gene069997.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.94e-41 146
MS.gene069997.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.94e-41 146
MS.gene069997.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.74e-40 145
MS.gene069997.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.74e-40 145
MS.gene069997.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.74e-40 145
MS.gene069997.t1 AT2G40860 33.882 304 167 8 67 355 268 552 2.98e-40 150
MS.gene069997.t1 AT2G40860 33.882 304 167 8 67 355 366 650 4.65e-40 150
MS.gene069997.t1 AT1G67820 37.247 247 127 8 95 332 86 313 7.47e-39 144
MS.gene069997.t1 AT1G67820 37.247 247 127 8 95 332 122 349 8.78e-39 144
MS.gene069997.t1 AT1G22280 35.156 256 136 7 106 353 47 280 4.81e-38 138
MS.gene069997.t1 AT4G31860 28.182 330 171 6 92 365 22 341 5.65e-38 140
MS.gene069997.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.95e-38 138
MS.gene069997.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.95e-38 138
MS.gene069997.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.95e-38 138
MS.gene069997.t1 AT2G20630 34.498 229 132 5 131 353 62 278 7.36e-37 135
MS.gene069997.t1 AT2G20630 34.498 229 132 5 131 353 62 278 1.47e-36 134
MS.gene069997.t1 AT2G25070 28.313 332 172 6 92 367 22 343 2.94e-36 135
MS.gene069997.t1 AT2G25070 28.313 332 172 6 92 367 22 343 2.94e-36 135
MS.gene069997.t1 AT2G30020 35.496 262 144 8 99 351 145 390 6.33e-36 135
MS.gene069997.t1 AT1G18030 32.372 312 163 10 76 353 51 348 7.13e-36 134
MS.gene069997.t1 AT1G22280 35.496 262 133 9 106 353 47 286 7.89e-36 132
MS.gene069997.t1 AT4G28400 34.498 229 132 6 131 353 44 260 9.28e-35 129
MS.gene069997.t1 AT2G40860 32.526 289 161 8 67 340 366 635 1.77e-34 135
MS.gene069997.t1 AT4G28400 34.498 229 132 6 131 353 66 282 1.99e-34 129
MS.gene069997.t1 AT1G07160 33.712 264 147 8 99 351 128 374 1.37e-33 129
MS.gene069997.t1 AT4G31860 28.571 280 139 5 92 320 22 291 1.77e-32 124
MS.gene069997.t1 AT2G40180 33.208 265 150 7 99 351 134 383 4.59e-32 125
MS.gene069997.t1 AT5G57050 29.752 363 177 14 56 351 58 409 1.24e-30 121
MS.gene069997.t1 AT3G15260 34.211 228 132 6 132 353 73 288 5.11e-30 117
MS.gene069997.t1 AT3G15260 34.211 228 132 6 132 353 73 288 5.11e-30 117
MS.gene069997.t1 AT5G57050 30.556 324 164 13 78 351 57 369 1.32e-29 118
MS.gene069997.t1 AT4G26080 30.145 345 171 15 68 355 93 424 1.76e-29 118
MS.gene069997.t1 AT4G31860 28.409 264 128 5 92 304 22 275 3.45e-29 114
MS.gene069997.t1 AT1G18030 31.439 264 134 9 76 306 51 300 4.78e-28 112
MS.gene069997.t1 AT2G29380 31.930 285 149 11 101 351 85 358 1.17e-27 112
MS.gene069997.t1 AT1G07430 33.171 205 112 5 132 317 157 355 1.87e-26 110
MS.gene069997.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.82e-26 110
MS.gene069997.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.82e-26 110
MS.gene069997.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.82e-26 110
MS.gene069997.t1 AT2G34740 30.870 230 139 7 131 353 118 334 5.09e-26 107
MS.gene069997.t1 AT1G34750 34.066 182 106 4 131 306 65 238 1.50e-25 103
MS.gene069997.t1 AT4G27800 28.197 305 167 7 86 350 53 345 1.40e-24 104
MS.gene069997.t1 AT5G51760 30.714 280 134 8 125 351 107 379 2.30e-24 103
MS.gene069997.t1 AT5G51760 30.714 280 134 8 125 351 137 409 2.94e-24 103
MS.gene069997.t1 AT2G40860 31.707 246 137 7 67 297 366 595 4.31e-24 104
MS.gene069997.t1 AT4G28400 32.418 182 109 4 131 306 66 239 7.64e-24 99.8
MS.gene069997.t1 AT3G11410 29.259 270 152 7 75 317 86 343 2.60e-23 100
MS.gene069997.t1 AT5G02760 29.553 291 142 10 124 357 64 348 3.45e-23 100
MS.gene069997.t1 AT1G17550 28.521 284 145 8 119 351 223 499 4.18e-23 101
MS.gene069997.t1 AT1G17550 28.521 284 145 8 119 351 223 499 4.18e-23 101
MS.gene069997.t1 AT5G59220 31.330 233 136 8 101 317 119 343 1.75e-22 98.6
MS.gene069997.t1 AT3G06270 28.137 263 136 8 132 351 88 340 1.66e-21 95.1
MS.gene069997.t1 AT3G17090 29.010 293 143 11 130 363 82 368 8.50e-21 93.6
MS.gene069997.t1 AT4G27800 27.645 293 160 7 86 338 53 333 1.13e-20 92.4
MS.gene069997.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene069997.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene069997.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene069997.t1 AT4G27800 27.660 282 152 7 86 327 53 322 9.50e-20 89.7
MS.gene069997.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.24e-19 87.8
MS.gene069997.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.24e-19 87.8
MS.gene069997.t1 AT2G34740 31.016 187 113 6 131 310 114 291 1.26e-19 89.0
MS.gene069997.t1 AT2G34740 31.016 187 113 6 131 310 132 309 1.60e-19 89.0
MS.gene069997.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.60e-19 90.5
MS.gene069997.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.69e-19 90.5
MS.gene069997.t1 AT4G08260 31.839 223 116 8 131 351 18 206 4.49e-19 85.5
MS.gene069997.t1 AT5G06750 28.514 249 133 8 130 338 80 323 5.39e-19 88.2
MS.gene069997.t1 AT5G06750 28.514 249 133 8 130 338 80 323 5.39e-19 88.2
MS.gene069997.t1 AT3G51370 25.753 299 157 8 130 369 77 369 8.58e-19 87.4
MS.gene069997.t1 AT3G51370 25.753 299 157 8 130 369 77 369 8.58e-19 87.4
MS.gene069997.t1 AT3G17090 29.289 239 126 9 130 331 82 314 3.22e-18 85.1
MS.gene069997.t1 AT4G38520 26.298 289 150 8 130 360 79 362 3.35e-18 85.9
MS.gene069997.t1 AT4G38520 26.298 289 150 8 130 360 79 362 3.35e-18 85.9
MS.gene069997.t1 AT3G27140 31.624 234 101 8 131 362 18 194 5.27e-18 83.2
MS.gene069997.t1 AT5G26010 29.293 297 160 13 89 349 38 320 1.48e-17 83.2
MS.gene069997.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.58e-17 84.3
MS.gene069997.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.58e-17 84.3
MS.gene069997.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.58e-17 84.3
MS.gene069997.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.58e-17 84.3
MS.gene069997.t1 AT5G57050 29.688 256 130 10 56 266 58 308 1.67e-17 82.8
MS.gene069997.t1 AT3G12620 28.231 294 138 9 130 360 81 364 2.57e-17 83.2
MS.gene069997.t1 AT3G12620 28.231 294 138 9 130 360 81 364 2.57e-17 83.2
MS.gene069997.t1 AT5G19280 32.000 250 143 11 127 353 332 577 1.63e-16 81.6
MS.gene069997.t1 AT4G32950 29.279 222 111 8 130 318 70 278 7.33e-16 78.2
MS.gene069997.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.20e-15 78.2
MS.gene069997.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.20e-15 78.2
MS.gene069997.t1 AT3G02750 32.934 167 88 5 168 315 191 352 3.82e-15 77.4
MS.gene069997.t1 AT3G02750 32.934 167 88 5 168 315 191 352 3.82e-15 77.4
MS.gene069997.t1 AT5G36250 28.922 204 113 6 157 339 171 363 6.58e-15 76.3
MS.gene069997.t1 AT5G66080 25.166 302 158 10 130 369 80 375 7.01e-15 75.9
MS.gene069997.t1 AT5G27930 29.057 265 135 11 132 349 92 350 9.46e-15 75.5
MS.gene069997.t1 AT5G27930 29.057 265 135 11 132 349 92 350 9.46e-15 75.5
MS.gene069997.t1 AT5G19280 30.769 260 143 12 127 353 332 587 1.12e-14 75.9
MS.gene069997.t1 AT1G47380 27.203 261 150 10 131 367 63 307 1.47e-14 75.1
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 151 352 2.87e-14 74.3
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 151 352 2.87e-14 74.3
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.52e-14 73.9
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.52e-14 73.9
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.52e-14 73.9
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.52e-14 73.9
MS.gene069997.t1 AT1G09160 25.703 249 145 10 131 355 67 299 3.90e-14 73.9
MS.gene069997.t1 AT1G09160 25.703 249 145 10 131 355 67 299 3.90e-14 73.9
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 221 422 5.11e-14 73.9
MS.gene069997.t1 AT1G79630 30.986 213 110 8 191 377 217 418 5.11e-14 73.9
MS.gene069997.t1 AT3G51370 27.074 229 110 6 192 369 62 284 5.22e-14 72.4
MS.gene069997.t1 AT1G16220 34.043 141 70 4 191 313 198 333 5.85e-14 73.6
MS.gene069997.t1 AT1G22280 33.562 146 82 4 106 248 47 180 1.27e-13 69.7
MS.gene069997.t1 AT1G72770 28.448 232 113 7 79 264 177 401 4.62e-13 70.5
MS.gene069997.t1 AT1G72770 28.448 232 113 7 79 264 177 401 4.62e-13 70.5
MS.gene069997.t1 AT5G59220 30.000 180 108 6 101 264 119 296 5.67e-13 69.3
MS.gene069997.t1 AT4G33920 25.079 315 151 12 113 359 47 344 5.74e-13 70.1
MS.gene069997.t1 AT4G03415 28.994 169 96 4 167 316 169 332 6.88e-13 70.1
MS.gene069997.t1 AT4G03415 28.994 169 96 4 167 316 169 332 6.88e-13 70.1
MS.gene069997.t1 AT4G03415 28.994 169 96 4 167 316 169 332 6.88e-13 70.1
MS.gene069997.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene069997.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene069997.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene069997.t1 AT5G01700 27.393 303 158 12 132 386 29 317 1.53e-12 68.6
MS.gene069997.t1 AT5G01700 27.393 303 158 12 132 386 78 366 3.06e-12 67.8
MS.gene069997.t1 AT5G06750 30.726 179 87 6 192 338 68 241 6.02e-12 66.6
MS.gene069997.t1 AT5G36250 27.064 218 113 7 157 339 171 377 1.17e-11 66.6
MS.gene069997.t1 AT1G03590 28.571 168 96 5 168 316 160 322 1.50e-11 66.2

Find 112 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATACAATTTGGTTTC+TGG 0.063429 3.1:+91551925 None:intergenic
GCTTTAACTGCACTTGTATT+TGG 0.106810 3.1:-91552372 MS.gene069997:CDS
GGATGATGAATTCTTGATTA+TGG 0.180271 3.1:-91551739 MS.gene069997:CDS
CCTCTTCCCGGAGCTTTCTA+TGG 0.196448 3.1:-91553082 MS.gene069997:CDS
AGTCTTTCTGAAATACAATT+TGG 0.227111 3.1:+91551918 None:intergenic
AGTCCTCAACAATGAGTTTA+AGG 0.235742 3.1:+91552499 None:intergenic
TCGCCTTCTAGTATTGTAAT+TGG 0.239407 3.1:+91553997 None:intergenic
GATAATGATGATGACAAATT+AGG 0.274200 3.1:-91553949 MS.gene069997:CDS
TGCAGCCAGTTTCAATCTAT+TGG 0.280570 3.1:+91553849 None:intergenic
AAGAGGACCTAAACAATATA+TGG 0.314058 3.1:-91553164 MS.gene069997:CDS
ACTTCAAATGTTCCTCTTCC+CGG 0.314733 3.1:-91553094 MS.gene069997:CDS
CTTTAACTGCACTTGTATTT+GGG 0.315593 3.1:-91552371 MS.gene069997:CDS
GATTGTTATGCATGTGGATA+TGG 0.322652 3.1:-91554031 None:intergenic
CTCATTGTTCAGGTGTTTGA+TGG 0.330417 3.1:-91552564 MS.gene069997:intron
AGAAAGCCTTACTTTACTTA+AGG 0.331641 3.1:-91551490 MS.gene069997:CDS
CTCTTCCCGGAGCTTTCTAT+GGG 0.334929 3.1:-91553081 MS.gene069997:CDS
TCATCTTCCATATATTGTTT+AGG 0.337678 3.1:+91553157 None:intergenic
TCTCCCCAGATCCTCCTTCC+AGG 0.343292 3.1:-91551554 MS.gene069997:CDS
GAGTGCCGAGCCAGAGTTGC+AGG 0.350375 3.1:-91551778 MS.gene069997:CDS
TCTATCCTGGAAGGAGGATC+TGG 0.353595 3.1:+91551549 None:intergenic
GAAACTGGCTGCATCAGATT+TGG 0.357220 3.1:-91553839 MS.gene069997:intron
AGGCACGTGAAACAGATAAT+TGG 0.379392 3.1:+91551847 None:intergenic
GAAAGCCTTACTTTACTTAA+GGG 0.380886 3.1:-91551489 MS.gene069997:CDS
GATGATGAATTCTTGATTAT+GGG 0.388378 3.1:-91551738 MS.gene069997:CDS
TTATCTGTTTCACGTGCCTT+AGG 0.408033 3.1:-91551843 MS.gene069997:CDS
ATTGTATTTCAGAAAGACTA+AGG 0.408240 3.1:-91551914 MS.gene069997:CDS
AATCTTAAACCAACCACAAT+TGG 0.411304 3.1:-91553916 MS.gene069997:CDS
AATAAGATTTCCTGCAACTC+TGG 0.414668 3.1:+91551768 None:intergenic
TAGCTCCAATAGATTGAAAC+TGG 0.425800 3.1:-91553854 MS.gene069997:CDS
CAACTTCCTGATCGAAATAT+CGG 0.427335 3.1:+91553193 None:intergenic
AGTGTGGATGCAGAGGTTAC+TGG 0.429225 3.1:-91553253 MS.gene069997:CDS
TAACTCATGTGATAATTTAA+CGG 0.431939 3.1:-91551592 MS.gene069997:CDS
TGCTGTGACCATGGCAAGAA+AGG 0.436779 3.1:-91551679 MS.gene069997:CDS
TTTCACGTGCCTTAGGTGAC+TGG 0.440786 3.1:-91551836 MS.gene069997:CDS
CTCAAACTGGAAGCATGTCT+TGG 0.449022 3.1:+91553886 None:intergenic
AGATACCTCCTTCTCGAGTC+AGG 0.452138 3.1:-91551527 MS.gene069997:CDS
AACTCTCTCGAACACCTTTG+AGG 0.459406 3.1:+91551636 None:intergenic
CCTCCAATTACAATACTAGA+AGG 0.459410 3.1:-91554000 MS.gene069997:CDS
CAAAGGACAGGCAGAACCCT+TGG 0.469942 3.1:+91551800 None:intergenic
AGAAGGAGGTATCTCTATCC+TGG 0.471146 3.1:+91551536 None:intergenic
ATACACCCTTAAGTAAAGTA+AGG 0.471953 3.1:+91551484 None:intergenic
AGAGGAGATATCAAGCGAAC+TGG 0.473514 3.1:+91552404 None:intergenic
CCATAGAAAGCTCCGGGAAG+AGG 0.477635 3.1:+91553082 None:intergenic
GCTAAGGCTATGTCTCAAAC+TGG 0.485089 3.1:+91553873 None:intergenic
GTTCAGGTGTTTGATGGCCA+TGG 0.485255 3.1:-91552558 MS.gene069997:intron
TTCTTGATTATGGGCTGTGA+TGG 0.488636 3.1:-91551729 MS.gene069997:CDS
AGTTCGCTTGATATCTCCTC+TGG 0.489115 3.1:-91552402 MS.gene069997:CDS
CTATCCTGGAAGGAGGATCT+GGG 0.492994 3.1:+91551550 None:intergenic
AAACTGGAAGCATGTCTTGG+AGG 0.497115 3.1:+91553889 None:intergenic
AACATGGTAATTGCAAATGC+GGG 0.500584 3.1:-91552002 MS.gene069997:CDS
TCTTGGAGGTTTACCAATTG+TGG 0.502037 3.1:+91553903 None:intergenic
CCTTCTAGTATTGTAATTGG+AGG 0.506725 3.1:+91554000 None:intergenic
TCTCAGTTTCCAACTTGTGT+GGG 0.508801 3.1:-91552477 MS.gene069997:CDS
GTTTCCAACTTGTGTGGGGA+AGG 0.512554 3.1:-91552472 MS.gene069997:CDS
CTCTCAGTTTCCAACTTGTG+TGG 0.515279 3.1:-91552478 MS.gene069997:CDS
GGAGGTTTACCAATTGTGGT+TGG 0.517867 3.1:+91553907 None:intergenic
TGATAATTTAACGGTTATTG+TGG 0.519496 3.1:-91551583 MS.gene069997:CDS
GTTTCAATCTATTGGAGCTA+AGG 0.520235 3.1:+91553857 None:intergenic
CATCAACTCCTTTCTTGCCA+TGG 0.520543 3.1:+91551671 None:intergenic
ACGAACCCCATAGAAAGCTC+CGG 0.522866 3.1:+91553075 None:intergenic
ATTGCCTTCCCCACACAAGT+TGG 0.523655 3.1:+91552468 None:intergenic
TTTGTTCCGATATTTCGATC+AGG 0.526490 3.1:-91553199 MS.gene069997:CDS
CTTAGGTGACTGGCACATGA+AGG 0.537656 3.1:-91551826 MS.gene069997:CDS
CTTGGTGGGGTGGTATATGA+TGG 0.541375 3.1:-91551882 MS.gene069997:CDS
TTGCCATGGTCACAGCACCT+TGG 0.547224 3.1:+91551685 None:intergenic
AAAGGACAGGCAGAACCCTT+GGG 0.548931 3.1:+91551801 None:intergenic
GGGGATTGTCGAGCTGTACT+GGG 0.549473 3.1:-91551981 MS.gene069997:CDS
TCTTACAAACAAAGCAGCAT+CGG 0.551613 3.1:+91552530 None:intergenic
GATTTCCTGCAACTCTGGCT+CGG 0.555836 3.1:+91551773 None:intergenic
AACTCTGGCTCGGCACTCAA+AGG 0.558498 3.1:+91551783 None:intergenic
CTTCATGTGCCAGTCACCTA+AGG 0.565352 3.1:+91551827 None:intergenic
CTGGCACATGAAGGGTCCCA+AGG 0.566388 3.1:-91551817 MS.gene069997:CDS
CGAGCTGTACTGGGAAGGCG+AGG 0.567777 3.1:-91551972 MS.gene069997:CDS
TCAGGAAGTTGTGCTGAAAG+AGG 0.568890 3.1:-91553181 MS.gene069997:CDS
CTCAGTTTCCAACTTGTGTG+GGG 0.570395 3.1:-91552476 MS.gene069997:CDS
CGAACCCCATAGAAAGCTCC+GGG 0.570787 3.1:+91553076 None:intergenic
AATCAAGAATTCATCATCCT+CGG 0.573522 3.1:+91551743 None:intergenic
TTAGGTGACTGGCACATGAA+GGG 0.574484 3.1:-91551825 MS.gene069997:CDS
TCAAAGGTGTTCGAGAGAGT+TGG 0.583518 3.1:-91551634 MS.gene069997:CDS
TTATGGGCTGTGATGGCCTG+TGG 0.583612 3.1:-91551722 MS.gene069997:CDS
TGGCTCGGCACTCAAAGGAC+AGG 0.584284 3.1:+91551788 None:intergenic
GAACATGGTAATTGCAAATG+CGG 0.589776 3.1:-91552003 MS.gene069997:CDS
GTATATGATGGATACTTGAA+TGG 0.591854 3.1:-91551870 MS.gene069997:CDS
TTTCATCATTGACAGGAACA+TGG 0.594549 3.1:-91552018 MS.gene069997:intron
TATGGGCTGTGATGGCCTGT+GGG 0.595224 3.1:-91551721 MS.gene069997:CDS
AAGCAGCATCGGTTCCTCCA+TGG 0.595456 3.1:+91552541 None:intergenic
ATACTCCTCCTGACTCGAGA+AGG 0.595732 3.1:+91551519 None:intergenic
TAACCAAGGTGCTGTGACCA+TGG 0.601204 3.1:-91551688 MS.gene069997:CDS
TAACTGCACTTGTATTTGGG+AGG 0.603179 3.1:-91552368 MS.gene069997:intron
TGGCACATGAAGGGTCCCAA+GGG 0.607482 3.1:-91551816 MS.gene069997:CDS
ATTGTCGAGCTGTACTGGGA+AGG 0.608398 3.1:-91551977 MS.gene069997:CDS
CATCCTTAAACTCATTGTTG+AGG 0.608747 3.1:-91552502 MS.gene069997:CDS
GGTTACTCATTACATCCCAC+AGG 0.609793 3.1:+91551706 None:intergenic
GGAAGAGATTGTTATGCATG+TGG 0.615504 3.1:-91554037 None:intergenic
TTCGAGAGAGTTGGTCAGAG+AGG 0.616595 3.1:-91551625 MS.gene069997:CDS
TACAAGTGCAGTTAAAGCGG+TGG 0.621319 3.1:+91552377 None:intergenic
GATGATCTTACTCAACACAT+AGG 0.621620 3.1:-91553121 MS.gene069997:CDS
CTCCTCCTGACTCGAGAAGG+AGG 0.623337 3.1:+91551522 None:intergenic
GGAGGTATCTCTATCCTGGA+AGG 0.623574 3.1:+91551540 None:intergenic
AGTTAAAGCGGTGGTGCCAG+AGG 0.623929 3.1:+91552386 None:intergenic
ACATGGTAATTGCAAATGCG+GGG 0.624191 3.1:-91552001 MS.gene069997:CDS
TGATACATAATGATCCTCAA+AGG 0.634106 3.1:-91551650 MS.gene069997:CDS
AAATACAAGTGCAGTTAAAG+CGG 0.641797 3.1:+91552374 None:intergenic
GAGCTGTACTGGGAAGGCGA+GGG 0.651369 3.1:-91551971 MS.gene069997:CDS
TACCTCCTTCTCGAGTCAGG+AGG 0.654982 3.1:-91551524 MS.gene069997:CDS
CATGGTAATTGCAAATGCGG+GGG 0.660694 3.1:-91552000 MS.gene069997:CDS
GCAGGAAATCTTATTGACCG+AGG 0.667282 3.1:-91551760 MS.gene069997:CDS
TATCCTGGAAGGAGGATCTG+GGG 0.673089 3.1:+91551551 None:intergenic
GGTATCTCTATCCTGGAAGG+AGG 0.683404 3.1:+91551543 None:intergenic
CAGGTGTTTGATGGCCATGG+AGG 0.686582 3.1:-91552555 MS.gene069997:CDS
TCTTCCCGGAGCTTTCTATG+GGG 0.694705 3.1:-91553080 MS.gene069997:intron
TGGGATGTAATGAGTAACCA+AGG 0.735826 3.1:-91551702 MS.gene069997:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATATTTTGACATTT+TGG - chr3.1:91551743-91551762 MS.gene069997:CDS 10.0%
!!! CATAAAATATATTGTTTTAA+TGG - chr3.1:91552827-91552846 MS.gene069997:intron 10.0%
!! AAAATTAATGAAAAGAATCA+TGG + chr3.1:91553176-91553195 None:intergenic 15.0%
!! AATGTTTGGAAACAATATAA+TGG - chr3.1:91553283-91553302 MS.gene069997:intron 20.0%
!! AGTAAAGTATAAAGTAGTAT+TGG + chr3.1:91552154-91552173 None:intergenic 20.0%
!! ATTGGTTAAGGAATAAAAAA+AGG - chr3.1:91551911-91551930 MS.gene069997:CDS 20.0%
!! GATGAAATTTCACAAATTTA+GGG + chr3.1:91553466-91553485 None:intergenic 20.0%
!! TAAAAAAAGGTAAGTTTGTA+TGG - chr3.1:91551924-91551943 MS.gene069997:CDS 20.0%
!! TAACATGCAAACAAAAATAA+AGG + chr3.1:91552886-91552905 None:intergenic 20.0%
!! TAACTCATGTGATAATTTAA+CGG - chr3.1:91553905-91553924 MS.gene069997:CDS 20.0%
!! TGATGAAATTTCACAAATTT+AGG + chr3.1:91553467-91553486 None:intergenic 20.0%
!!! AGATCCTATTATTTTTAAGT+GGG - chr3.1:91553237-91553256 MS.gene069997:CDS 20.0%
!!! CATTAATTTTAGCAAGTTTT+AGG - chr3.1:91553186-91553205 MS.gene069997:CDS 20.0%
!!! TAAGATAAACTTTCCTTTTA+TGG - chr3.1:91551981-91552000 MS.gene069997:CDS 20.0%
!!! TAGATCCTATTATTTTTAAG+TGG - chr3.1:91553236-91553255 MS.gene069997:CDS 20.0%
! AAACAACCAATAAAATCTGA+AGG + chr3.1:91553214-91553233 None:intergenic 25.0%
! AACACCCACTTAAAAATAAT+AGG + chr3.1:91553244-91553263 None:intergenic 25.0%
! ATTGTATTTCAGAAAGACTA+AGG - chr3.1:91553583-91553602 MS.gene069997:intron 25.0%
! CATTTGTTTACTTTGCTTAA+AGG - chr3.1:91552556-91552575 MS.gene069997:intron 25.0%
! CTAACTAGTAATCTAAACAT+TGG + chr3.1:91552016-91552035 None:intergenic 25.0%
! GATGATGAATTCTTGATTAT+GGG - chr3.1:91553759-91553778 MS.gene069997:intron 25.0%
! TCATCTTCCATATATTGTTT+AGG + chr3.1:91552343-91552362 None:intergenic 25.0%
! TGATAATTTAACGGTTATTG+TGG - chr3.1:91553914-91553933 MS.gene069997:CDS 25.0%
! TTCAGATGGAAATTAAACAT+CGG + chr3.1:91552741-91552760 None:intergenic 25.0%
! TTGGTTAATGAATCCATAAA+AGG + chr3.1:91551997-91552016 None:intergenic 25.0%
!! GATAATGATGATGACAAATT+AGG - chr3.1:91551548-91551567 MS.gene069997:CDS 25.0%
!! TTTTTATTCCTTAACCAATG+TGG + chr3.1:91551910-91551929 None:intergenic 25.0%
!!! AGTCTTTCTGAAATACAATT+TGG + chr3.1:91553582-91553601 None:intergenic 25.0%
AAATACAAGTGCAGTTAAAG+CGG + chr3.1:91553126-91553145 None:intergenic 30.0%
AAGAGGACCTAAACAATATA+TGG - chr3.1:91552333-91552352 MS.gene069997:intron 30.0%
AATCAAGAATTCATCATCCT+CGG + chr3.1:91553757-91553776 None:intergenic 30.0%
AATCATGGAATCATAATGCA+AGG + chr3.1:91553161-91553180 None:intergenic 30.0%
AATCTTAAACCAACCACAAT+TGG - chr3.1:91551581-91551600 MS.gene069997:CDS 30.0%
AGAAAGCCTTACTTTACTTA+AGG - chr3.1:91554007-91554026 MS.gene069997:CDS 30.0%
AGACTAAGGATTGAAAAACT+TGG - chr3.1:91553597-91553616 MS.gene069997:intron 30.0%
ATACACCCTTAAGTAAAGTA+AGG + chr3.1:91554016-91554035 None:intergenic 30.0%
CATGCAAACAAAAATAAAGG+TGG + chr3.1:91552883-91552902 None:intergenic 30.0%
CTGTTAAGAATAGTAATGCA+TGG + chr3.1:91552710-91552729 None:intergenic 30.0%
CTTTAACTGCACTTGTATTT+GGG - chr3.1:91553126-91553145 MS.gene069997:CDS 30.0%
GAAAGCCTTACTTTACTTAA+GGG - chr3.1:91554008-91554027 MS.gene069997:CDS 30.0%
GATTAGGACAAATGAGTAAT+AGG - chr3.1:91552776-91552795 MS.gene069997:intron 30.0%
GGATGATGAATTCTTGATTA+TGG - chr3.1:91553758-91553777 MS.gene069997:intron 30.0%
GTATTTATGTCTCATCTCAT+TGG - chr3.1:91553359-91553378 MS.gene069997:intron 30.0%
TAAGGATTGAAAAACTTGGT+GGG - chr3.1:91553601-91553620 MS.gene069997:intron 30.0%
TACAACGAATATGACAACAT+AGG + chr3.1:91552178-91552197 None:intergenic 30.0%
TACTATTCTTAACAGAATCG+TGG - chr3.1:91552715-91552734 MS.gene069997:intron 30.0%
TCATATTCGTTGTAAAGCTT+AGG - chr3.1:91552184-91552203 MS.gene069997:intron 30.0%
TGATACATAATGATCCTCAA+AGG - chr3.1:91553847-91553866 MS.gene069997:CDS 30.0%
TGTGAAATTTCATCATTGAC+AGG - chr3.1:91553472-91553491 MS.gene069997:intron 30.0%
TTCTTCAACCGTAATTTATC+CGG - chr3.1:91553313-91553332 MS.gene069997:intron 30.0%
! CTGAAATACAATTTGGTTTC+TGG + chr3.1:91553575-91553594 None:intergenic 30.0%
! TGTTTTTCCCGGATAAATTA+CGG + chr3.1:91553324-91553343 None:intergenic 30.0%
!! GTATATGATGGATACTTGAA+TGG - chr3.1:91553627-91553646 MS.gene069997:intron 30.0%
AAACACCTGAACAATGAGTA+TGG + chr3.1:91552931-91552950 None:intergenic 35.0%
AAATGAGTAATAGGCTAGAG+AGG - chr3.1:91552785-91552804 MS.gene069997:intron 35.0%
AACACCTGAACAATGAGTAT+GGG + chr3.1:91552930-91552949 None:intergenic 35.0%
AACATGGTAATTGCAAATGC+GGG - chr3.1:91553495-91553514 MS.gene069997:intron 35.0%
AATAAGATTTCCTGCAACTC+TGG + chr3.1:91553732-91553751 None:intergenic 35.0%
AATAGTAATGCATGGAGAAG+AGG + chr3.1:91552702-91552721 None:intergenic 35.0%
AGTCCTCAACAATGAGTTTA+AGG + chr3.1:91553001-91553020 None:intergenic 35.0%
AGTTGACATTGCTGAAGATT+AGG - chr3.1:91552760-91552779 MS.gene069997:intron 35.0%
ATATGCAGTACGATCAATGA+TGG + chr3.1:91552638-91552657 None:intergenic 35.0%
ATGGGAAATACAAAGAGTAG+TGG + chr3.1:91552619-91552638 None:intergenic 35.0%
ATGTGTGTATCAGTTTAGCA+AGG + chr3.1:91552102-91552121 None:intergenic 35.0%
CAACTTCCTGATCGAAATAT+CGG + chr3.1:91552307-91552326 None:intergenic 35.0%
CATCCTTAAACTCATTGTTG+AGG - chr3.1:91552995-91553014 MS.gene069997:intron 35.0%
CCTCCAATTACAATACTAGA+AGG - chr3.1:91551497-91551516 MS.gene069997:CDS 35.0%
CCTTCTAGTATTGTAATTGG+AGG + chr3.1:91551500-91551519 None:intergenic 35.0%
CGGGAAAAACATAAGATTCT+GGG - chr3.1:91553333-91553352 MS.gene069997:intron 35.0%
CTAAGGATTGAAAAACTTGG+TGG - chr3.1:91553600-91553619 MS.gene069997:intron 35.0%
GAACATGGTAATTGCAAATG+CGG - chr3.1:91553494-91553513 MS.gene069997:intron 35.0%
GATGATCTTACTCAACACAT+AGG - chr3.1:91552376-91552395 MS.gene069997:CDS 35.0%
GCTTTAACTGCACTTGTATT+TGG - chr3.1:91553125-91553144 MS.gene069997:CDS 35.0%
GTTTCAATCTATTGGAGCTA+AGG + chr3.1:91551643-91551662 None:intergenic 35.0%
TAGCTCCAATAGATTGAAAC+TGG - chr3.1:91551643-91551662 MS.gene069997:CDS 35.0%
TATGCAGTACGATCAATGAT+GGG + chr3.1:91552637-91552656 None:intergenic 35.0%
TCGCCTTCTAGTATTGTAAT+TGG + chr3.1:91551503-91551522 None:intergenic 35.0%
TCTTACAAACAAAGCAGCAT+CGG + chr3.1:91552970-91552989 None:intergenic 35.0%
TCTTCAACCGTAATTTATCC+GGG - chr3.1:91553314-91553333 MS.gene069997:intron 35.0%
TTTAAGTGGGTGTTAGAACA+CGG - chr3.1:91553250-91553269 MS.gene069997:CDS 35.0%
TTTCATCATTGACAGGAACA+TGG - chr3.1:91553479-91553498 MS.gene069997:intron 35.0%
TTTGTTCCGATATTTCGATC+AGG - chr3.1:91552298-91552317 MS.gene069997:intron 35.0%
! AACAAGTTCCACATTGGTTA+AGG - chr3.1:91551899-91551918 MS.gene069997:CDS 35.0%
! AAGGATTGAAAAACTTGGTG+GGG - chr3.1:91553602-91553621 MS.gene069997:intron 35.0%
! CCAGAATCTTATGTTTTTCC+CGG + chr3.1:91553335-91553354 None:intergenic 35.0%
! TAGGTGCCTTCAGATTTTAT+TGG - chr3.1:91553205-91553224 MS.gene069997:CDS 35.0%
!!! CTCTCTCTTTTTTAAGAGTG+TGG - chr3.1:91552228-91552247 MS.gene069997:intron 35.0%
ACATGGTAATTGCAAATGCG+GGG - chr3.1:91553496-91553515 MS.gene069997:intron 40.0%
ACTTCAAATGTTCCTCTTCC+CGG - chr3.1:91552403-91552422 MS.gene069997:CDS 40.0%
AGGCACGTGAAACAGATAAT+TGG + chr3.1:91553653-91553672 None:intergenic 40.0%
ATGTCTCATCTCATTGGAGA+TGG - chr3.1:91553365-91553384 MS.gene069997:intron 40.0%
CCAAGTAACAAGTTCCACAT+TGG - chr3.1:91551893-91551912 MS.gene069997:CDS 40.0%
CCGGGAAAAACATAAGATTC+TGG - chr3.1:91553332-91553351 MS.gene069997:intron 40.0%
CTCATTGTTCAGGTGTTTGA+TGG - chr3.1:91552933-91552952 MS.gene069997:intron 40.0%
GTAACCCATACTCATTGTTC+AGG - chr3.1:91552923-91552942 MS.gene069997:intron 40.0%
GTTTCCAAACATTGACAGAG+CGG + chr3.1:91553276-91553295 None:intergenic 40.0%
TAACTGCACTTGTATTTGGG+AGG - chr3.1:91553129-91553148 MS.gene069997:CDS 40.0%
TCAGCAATGTCAACTTCAGA+TGG + chr3.1:91552755-91552774 None:intergenic 40.0%
TCTCAGTTTCCAACTTGTGT+GGG - chr3.1:91553020-91553039 MS.gene069997:intron 40.0%
TCTTGGAGGTTTACCAATTG+TGG + chr3.1:91551597-91551616 None:intergenic 40.0%
TGCAGCCAGTTTCAATCTAT+TGG + chr3.1:91551651-91551670 None:intergenic 40.0%
TGGGATGTAATGAGTAACCA+AGG - chr3.1:91553795-91553814 MS.gene069997:intron 40.0%
TTATCTGTTTCACGTGCCTT+AGG - chr3.1:91553654-91553673 MS.gene069997:intron 40.0%
! AGTATGGGTTACTGAACTGT+TGG + chr3.1:91552915-91552934 None:intergenic 40.0%
! TTCTTGATTATGGGCTGTGA+TGG - chr3.1:91553768-91553787 MS.gene069997:intron 40.0%
!! CACAGAGCTTGTTATCTAAC+AGG + chr3.1:91552532-91552551 None:intergenic 40.0%
!! CCAATGTGGAACTTGTTACT+TGG + chr3.1:91551896-91551915 None:intergenic 40.0%
!! GCTTGTTATCTAACAGGTAC+AGG + chr3.1:91552526-91552545 None:intergenic 40.0%
!! TTTTAAGAGTGTGGATGCAG+AGG - chr3.1:91552237-91552256 MS.gene069997:intron 40.0%
AAAGGGGAAGAAACTCTGCT+AGG + chr3.1:91552666-91552685 None:intergenic 45.0%
AACTCTCTCGAACACCTTTG+AGG + chr3.1:91553864-91553883 None:intergenic 45.0%
AAGGGGAAGAAACTCTGCTA+GGG + chr3.1:91552665-91552684 None:intergenic 45.0%
AGAGGAGATATCAAGCGAAC+TGG + chr3.1:91553096-91553115 None:intergenic 45.0%
AGTTCGCTTGATATCTCCTC+TGG - chr3.1:91553095-91553114 MS.gene069997:CDS 45.0%
CATCAACTCCTTTCTTGCCA+TGG + chr3.1:91553829-91553848 None:intergenic 45.0%
CATGGTAATTGCAAATGCGG+GGG - chr3.1:91553497-91553516 MS.gene069997:intron 45.0%
CTCAGTTTCCAACTTGTGTG+GGG - chr3.1:91553021-91553040 MS.gene069997:intron 45.0%
CTCTCAGTTTCCAACTTGTG+TGG - chr3.1:91553019-91553038 MS.gene069997:intron 45.0%
GAAACTGGCTGCATCAGATT+TGG - chr3.1:91551658-91551677 MS.gene069997:CDS 45.0%
GCAGGAAATCTTATTGACCG+AGG - chr3.1:91553737-91553756 MS.gene069997:intron 45.0%
GCTAAGGCTATGTCTCAAAC+TGG + chr3.1:91551627-91551646 None:intergenic 45.0%
GGAGGTTTACCAATTGTGGT+TGG + chr3.1:91551593-91551612 None:intergenic 45.0%
GGTTACTCATTACATCCCAC+AGG + chr3.1:91553794-91553813 None:intergenic 45.0%
TACAAGTGCAGTTAAAGCGG+TGG + chr3.1:91553123-91553142 None:intergenic 45.0%
TCAGGAAGTTGTGCTGAAAG+AGG - chr3.1:91552316-91552335 MS.gene069997:intron 45.0%
TTAGGTGACTGGCACATGAA+GGG - chr3.1:91553672-91553691 MS.gene069997:intron 45.0%
! AAACTGGAAGCATGTCTTGG+AGG + chr3.1:91551611-91551630 None:intergenic 45.0%
! CTCAAACTGGAAGCATGTCT+TGG + chr3.1:91551614-91551633 None:intergenic 45.0%
! GATTGAAAAACTTGGTGGGG+TGG - chr3.1:91553605-91553624 MS.gene069997:intron 45.0%
!! AGAAGGAGGTATCTCTATCC+TGG + chr3.1:91553964-91553983 None:intergenic 45.0%
!! TCAAAGGTGTTCGAGAGAGT+TGG - chr3.1:91553863-91553882 MS.gene069997:CDS 45.0%
AAAGGACAGGCAGAACCCTT+GGG + chr3.1:91553699-91553718 None:intergenic 50.0%
ACGAACCCCATAGAAAGCTC+CGG + chr3.1:91552425-91552444 None:intergenic 50.0%
AGAGGCGAAAGAGGGAACAA+AGG + chr3.1:91552684-91552703 None:intergenic 50.0%
AGATACCTCCTTCTCGAGTC+AGG - chr3.1:91553970-91553989 MS.gene069997:CDS 50.0%
AGGCGAAAGAGGGAACAAAG+GGG + chr3.1:91552682-91552701 None:intergenic 50.0%
AGTGTGGATGCAGAGGTTAC+TGG - chr3.1:91552244-91552263 MS.gene069997:intron 50.0%
ATTGCCTTCCCCACACAAGT+TGG + chr3.1:91553032-91553051 None:intergenic 50.0%
ATTGTCGAGCTGTACTGGGA+AGG - chr3.1:91553520-91553539 MS.gene069997:intron 50.0%
CATGGAGAAGAGGCGAAAGA+GGG + chr3.1:91552692-91552711 None:intergenic 50.0%
CTATCCTGGAAGGAGGATCT+GGG + chr3.1:91553950-91553969 None:intergenic 50.0%
CTCTTCCCGGAGCTTTCTAT+GGG - chr3.1:91552416-91552435 MS.gene069997:CDS 50.0%
CTTAGGTGACTGGCACATGA+AGG - chr3.1:91553671-91553690 MS.gene069997:intron 50.0%
CTTCATGTGCCAGTCACCTA+AGG + chr3.1:91553673-91553692 None:intergenic 50.0%
CTTGGTGGGGTGGTATATGA+TGG - chr3.1:91553615-91553634 MS.gene069997:intron 50.0%
GAGATGGAAGAGAGAAGCTG+CGG - chr3.1:91553381-91553400 MS.gene069997:intron 50.0%
GAGGCGAAAGAGGGAACAAA+GGG + chr3.1:91552683-91552702 None:intergenic 50.0%
GATTTCCTGCAACTCTGGCT+CGG + chr3.1:91553727-91553746 None:intergenic 50.0%
GGTATCTCTATCCTGGAAGG+AGG + chr3.1:91553957-91553976 None:intergenic 50.0%
GTTTCCAACTTGTGTGGGGA+AGG - chr3.1:91553025-91553044 MS.gene069997:intron 50.0%
TATCCTGGAAGGAGGATCTG+GGG + chr3.1:91553949-91553968 None:intergenic 50.0%
TCTATCCTGGAAGGAGGATC+TGG + chr3.1:91553951-91553970 None:intergenic 50.0%
TCTTCCCGGAGCTTTCTATG+GGG - chr3.1:91552417-91552436 MS.gene069997:CDS 50.0%
TGCTGTGACCATGGCAAGAA+AGG - chr3.1:91553818-91553837 MS.gene069997:intron 50.0%
TTTCACGTGCCTTAGGTGAC+TGG - chr3.1:91553661-91553680 MS.gene069997:intron 50.0%
! ATACTCCTCCTGACTCGAGA+AGG + chr3.1:91553981-91554000 None:intergenic 50.0%
! GTTCAGGTGTTTGATGGCCA+TGG - chr3.1:91552939-91552958 MS.gene069997:intron 50.0%
! TTCGAGAGAGTTGGTCAGAG+AGG - chr3.1:91553872-91553891 MS.gene069997:CDS 50.0%
!! GGAGGTATCTCTATCCTGGA+AGG + chr3.1:91553960-91553979 None:intergenic 50.0%
!! TAACCAAGGTGCTGTGACCA+TGG - chr3.1:91553809-91553828 MS.gene069997:intron 50.0%
ACGGCCGCTCTGTCAATGTT+TGG - chr3.1:91553269-91553288 MS.gene069997:intron 55.0%
CAAAGGACAGGCAGAACCCT+TGG + chr3.1:91553700-91553719 None:intergenic 55.0%
CCATAGAAAGCTCCGGGAAG+AGG + chr3.1:91552418-91552437 None:intergenic 55.0%
CCTCTTCCCGGAGCTTTCTA+TGG - chr3.1:91552415-91552434 MS.gene069997:CDS 55.0%
CGAACCCCATAGAAAGCTCC+GGG + chr3.1:91552424-91552443 None:intergenic 55.0%
GCATGGAGAAGAGGCGAAAG+AGG + chr3.1:91552693-91552712 None:intergenic 55.0%
GGGGATTGTCGAGCTGTACT+GGG - chr3.1:91553516-91553535 MS.gene069997:intron 55.0%
TACCTCCTTCTCGAGTCAGG+AGG - chr3.1:91553973-91553992 MS.gene069997:CDS 55.0%
TGGCACATGAAGGGTCCCAA+GGG - chr3.1:91553681-91553700 MS.gene069997:intron 55.0%
TTGCCATGGTCACAGCACCT+TGG + chr3.1:91553815-91553834 None:intergenic 55.0%
! AGTTAAAGCGGTGGTGCCAG+AGG + chr3.1:91553114-91553133 None:intergenic 55.0%
! CAGGTGTTTGATGGCCATGG+AGG - chr3.1:91552942-91552961 MS.gene069997:intron 55.0%
! TATGGGCTGTGATGGCCTGT+GGG - chr3.1:91553776-91553795 MS.gene069997:intron 55.0%
! TTATGGGCTGTGATGGCCTG+TGG - chr3.1:91553775-91553794 MS.gene069997:intron 55.0%
!! AACTCTGGCTCGGCACTCAA+AGG + chr3.1:91553717-91553736 None:intergenic 55.0%
!! AAGCAGCATCGGTTCCTCCA+TGG + chr3.1:91552959-91552978 None:intergenic 55.0%
CTGGCACATGAAGGGTCCCA+AGG - chr3.1:91553680-91553699 MS.gene069997:intron 60.0%
GAGCTGTACTGGGAAGGCGA+GGG - chr3.1:91553526-91553545 MS.gene069997:intron 60.0%
GGGGGATTGTCGAGCTGTAC+TGG - chr3.1:91553515-91553534 MS.gene069997:intron 60.0%
TCTCCCCAGATCCTCCTTCC+AGG - chr3.1:91553943-91553962 MS.gene069997:CDS 60.0%
! CTCCTCCTGACTCGAGAAGG+AGG + chr3.1:91553978-91553997 None:intergenic 60.0%
! TGGCTCGGCACTCAAAGGAC+AGG + chr3.1:91553712-91553731 None:intergenic 60.0%
CGAGCTGTACTGGGAAGGCG+AGG - chr3.1:91553525-91553544 MS.gene069997:intron 65.0%
!! GAGTGCCGAGCCAGAGTTGC+AGG - chr3.1:91553719-91553738 MS.gene069997:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 91551473 91554046 91551473 ID=MS.gene069997
chr3.1 mRNA 91551473 91554046 91551473 ID=MS.gene069997.t1;Parent=MS.gene069997
chr3.1 exon 91553840 91554046 91553840 ID=MS.gene069997.t1.exon1;Parent=MS.gene069997.t1
chr3.1 CDS 91553840 91554046 91553840 ID=cds.MS.gene069997.t1;Parent=MS.gene069997.t1
chr3.1 exon 91553081 91553275 91553081 ID=MS.gene069997.t1.exon2;Parent=MS.gene069997.t1
chr3.1 CDS 91553081 91553275 91553081 ID=cds.MS.gene069997.t1;Parent=MS.gene069997.t1
chr3.1 exon 91552369 91552574 91552369 ID=MS.gene069997.t1.exon3;Parent=MS.gene069997.t1
chr3.1 CDS 91552369 91552574 91552369 ID=cds.MS.gene069997.t1;Parent=MS.gene069997.t1
chr3.1 exon 91551473 91552025 91551473 ID=MS.gene069997.t1.exon4;Parent=MS.gene069997.t1
chr3.1 CDS 91551473 91552025 91551473 ID=cds.MS.gene069997.t1;Parent=MS.gene069997.t1
Gene Sequence

>MS.gene069997

ATGCATGTGGATATGGATTATTCTCCTCCAATTACAATACTAGAAGGCGATGATTACAACAAAGACAATGATAATGATAATGATGATGACAAATTAGGAGATTTCAATAATCTTAAACCAACCACAATTGGTAAACCTCCAAGACATGCTTCCAGTTTGAGACATAGCCTTAGCTCCAATAGATTGAAACTGGCTGCATCAGATTTGGTATGTTATTCAACTTTTTCATAAAGTTTGATTTTTTTGCTAATATTTTTTTGTTGTTGTAATAATTATATATTTTGACATTTTGGTTCATGTCATGTTTTGTGTCTTTGTTGTTCTTACTTTGTAGTATTAATTTCTTTTGTTGCTTTGCTTGCTATAATTTTCAGATAATTTTAAATTTTCGTTTATGTTTTTATTACAAAGAAAATGCTACCAAGTAACAAGTTCCACATTGGTTAAGGAATAAAAAAAGGTAAGTTTGTATGGAAGATGATGTATTTATTACATTAACTTGTATTGTTAAGATAAACTTTCCTTTTATGGATTCATTAACCAATGTTTAGATTACTAGTTAGCAAGATACTACTTGTTAGTTTTTTTTAGCAAGCTTTAATGCTCTTGTTAGTCTTCATAATTCACCTTGCTAAACTGATACACACATAAATGCTGTGAACTTCATTTCAATTTTTACCAATACTACTTTATACTTTACTTCCTATGTTGTCATATTCGTTGTAAAGCTTAGGTTATCTGATTTGTCTGTTTCTCTCTCTCTTTTTTAAGAGTGTGGATGCAGAGGTTACTGGAAGTAAGTCATCTTCTGAAAACAAGACAGATTTTGTTCCGATATTTCGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACGTATGTATAGATGATCTTACTCAACACATAGGTTCTACTTCAAATGTTCCTCTTCCCGGAGCTTTCTATGGGGTTCGTATGTTATTCTTACTCGAGATTACAGTTTATATACATTTGATATGATATAAAGCTTCATATTTACATTCACATGTTGAACCTGTACCTGTTAGATAACAAGCTCTGTGTTTTCATTTGTTTACTTTGCTTAAAGGTAGTTTAGTCTTTTGTTACTTTTTGTTCATACATTTACCACTACTCTTTGTATTTCCCATCATTGATCGTACTGCATATTGTACCCTAGCAGAGTTTCTTCCCCTTTGTTCCCTCTTTCGCCTCTTCTCCATGCATTACTATTCTTAACAGAATCGTGGCCGATGTTTAATTTCCATCTGAAGTTGACATTGCTGAAGATTAGGACAAATGAGTAATAGGCTAGAGAGGTCTTTACTTTTGATATTTTCATAAAATATATTGTTTTAATGGATTGAAGTTTGTTGCTCATACAATGAGTTTCCACCTTTATTTTTGTTTGCATGTTAAAAAATCCAACAGTTCAGTAACCCATACTCATTGTTCAGGTGTTTGATGGCCATGGAGGAACCGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAAACTCATTGTTGAGGACTCTCAGTTTCCAACTTGTGTGGGGAAGGCAATTACAAGTGCGTTTATGAAAGCTGATTATGCATTTGCAGATTCCAGTTCGCTTGATATCTCCTCTGGCACCACCGCTTTAACTGCACTTGTATTTGGGAGGTAATGACCTTGCATTATGATTCCATGATTCTTTTCATTAATTTTAGCAAGTTTTAGGTGCCTTCAGATTTTATTGGTTGTTTGTTAGATCCTATTATTTTTAAGTGGGTGTTAGAACACGGCCGCTCTGTCAATGTTTGGAAACAATATAATGGCATTTGCTTCTTCAACCGTAATTTATCCGGGAAAAACATAAGATTCTGGGATAGTATTTATGTCTCATCTCATTGGAGATGGAAGAGAGAAGCTGCGGAAAGAAAAACTTATATGCATTGTGTTCTCTGTTGTTGCATGATTTCTTATGAGCTCTCTCCCTAAATTTGTGAAATTTCATCATTGACAGGAACATGGTAATTGCAAATGCGGGGGATTGTCGAGCTGTACTGGGAAGGCGAGGGAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGTATTTCAGAAAGACTAAGGATTGAAAAACTTGGTGGGGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCACGTGCCTTAGGTGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCTTTGAGTGCCGAGCCAGAGTTGCAGGAAATCTTATTGACCGAGGATGATGAATTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAAGGTGCTGTGACCATGGCAAGAAAGGAGTTGATGATACATAATGATCCTCAAAGGTGTTCGAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCATGTGATAATTTAACGGTTATTGTGGTATGTTTCTCCCCAGATCCTCCTTCCAGGATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGCCTTACTTTACTTAAGGGTGTATTAGAGTGTTAG
Protein sequence

>MS.gene069997.t1

MHVDMDYSPPITILEGDDYNKDNDNDNDDDKLGDFNNLKPTTIGKPPRHASSLRHSLSSNRLKLAASDLSVDAEVTGSKSSSENKTDFVPIFRSGSCAERGPKQYMEDEHVCIDDLTQHIGSTSNVPLPGAFYGVFDGHGGTDAALFVRNNILKLIVEDSQFPTCVGKAITSAFMKADYAFADSSSLDISSGTTALTALVFGRNMVIANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQGAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSPDPPSRIEIPPSRVRRSISAESLTLLKGVLEC