Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05017.t1 | XP_003600643.1 | 98.9 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.00E+00 | 1685.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05017.t1 | Q9FX32 | 70.0 | 814 | 241 | 1 | 2 | 815 | 4 | 814 | 0.0e+00 | 1188.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05017.t1 | G7J800 | 98.9 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.0e+00 | 1685.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049698 | MS.gene05017 | 0.847546 | 1.08E-59 | -1.69E-46 |
| MS.gene05017 | MS.gene058909 | 0.820191 | 7.82E-53 | -1.69E-46 |
| MS.gene05017 | MS.gene058912 | 0.818407 | 1.99E-52 | -1.69E-46 |
| MS.gene05017 | MS.gene06426 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene05017 | MS.gene067270 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene05017 | MS.gene067271 | 0.80553 | 1.28E-49 | -1.69E-46 |
| MS.gene05017 | MS.gene26381 | 0.836005 | 1.21E-56 | -1.69E-46 |
| MS.gene05017 | MS.gene30980 | 0.808466 | 3.06E-50 | -1.69E-46 |
| MS.gene05017 | MS.gene35007 | 0.800911 | 1.15E-48 | -1.69E-46 |
| MS.gene05017 | MS.gene42334 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene05017 | MS.gene47958 | 0.819057 | 1.42E-52 | -1.69E-46 |
| MS.gene05017 | MS.gene47960 | 0.814693 | 1.35E-51 | -1.69E-46 |
| MS.gene05017 | MS.gene47963 | 0.826374 | 2.81E-54 | -1.69E-46 |
| MS.gene05017 | MS.gene59879 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene05017 | MS.gene59880 | 0.813272 | 2.78E-51 | -1.69E-46 |
| MS.gene05017 | MS.gene70711 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene05017 | MS.gene71459 | 0.83299 | 6.90E-56 | -1.69E-46 |
| MS.gene05017 | MS.gene71460 | 0.833982 | 3.90E-56 | -1.69E-46 |
| MS.gene05017 | MS.gene75220 | 0.829851 | 4.08E-55 | -1.69E-46 |
| MS.gene05017 | MS.gene80867 | 0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene05017 | MS.gene84497 | 0.815499 | 8.96E-52 | -1.69E-46 |
| MS.gene05017 | MS.gene99526 | 0.803608 | 3.21E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05017 | MS.gene07237 | PPI |
| MS.gene85350 | MS.gene05017 | PPI |
| MS.gene22944 | MS.gene05017 | PPI |
| MS.gene07013 | MS.gene05017 | PPI |
| MS.gene05017 | MS.gene28775 | PPI |
| MS.gene030241 | MS.gene05017 | PPI |
| MS.gene012174 | MS.gene05017 | PPI |
| MS.gene025337 | MS.gene05017 | PPI |
| MS.gene05017 | MS.gene20759 | PPI |
| MS.gene05017 | MS.gene070146 | PPI |
| MS.gene062124 | MS.gene05017 | PPI |
| MS.gene26705 | MS.gene05017 | PPI |
| MS.gene05017 | MS.gene005566 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05017.t1 | MTR_3g064610 | 98.931 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1737 |
| MS.gene05017.t1 | MTR_5g076830 | 82.002 | 839 | 145 | 3 | 1 | 838 | 1 | 834 | 0.0 | 1452 |
| MS.gene05017.t1 | MTR_6g478000 | 63.603 | 816 | 227 | 2 | 19 | 834 | 18 | 763 | 0.0 | 1075 |
| MS.gene05017.t1 | MTR_6g478030 | 75.279 | 627 | 155 | 0 | 133 | 759 | 894 | 1520 | 0.0 | 992 |
| MS.gene05017.t1 | MTR_1g088170 | 56.343 | 804 | 347 | 2 | 1 | 804 | 1 | 800 | 0.0 | 940 |
| MS.gene05017.t1 | MTR_7g108930 | 55.283 | 814 | 357 | 3 | 1 | 814 | 1 | 807 | 0.0 | 934 |
| MS.gene05017.t1 | MTR_2g044070 | 56.057 | 776 | 333 | 6 | 41 | 814 | 35 | 804 | 0.0 | 927 |
| MS.gene05017.t1 | MTR_4g124660 | 56.589 | 774 | 330 | 4 | 41 | 813 | 37 | 805 | 0.0 | 926 |
| MS.gene05017.t1 | MTR_4g124660 | 58.357 | 718 | 293 | 4 | 41 | 757 | 37 | 749 | 0.0 | 874 |
| MS.gene05017.t1 | MTR_6g478020 | 71.500 | 200 | 53 | 1 | 639 | 834 | 1 | 200 | 8.52e-93 | 318 |
| MS.gene05017.t1 | MTR_0277s0020 | 58.854 | 192 | 43 | 2 | 647 | 834 | 1159 | 1318 | 6.64e-62 | 228 |
| MS.gene05017.t1 | MTR_0419s0050 | 52.532 | 158 | 15 | 2 | 583 | 740 | 1 | 98 | 4.15e-43 | 151 |
| MS.gene05017.t1 | MTR_5g091340 | 27.027 | 555 | 321 | 21 | 286 | 787 | 171 | 694 | 4.52e-40 | 160 |
| MS.gene05017.t1 | MTR_4g115620 | 27.306 | 542 | 312 | 19 | 286 | 779 | 168 | 675 | 4.11e-39 | 157 |
| MS.gene05017.t1 | MTR_3g047380 | 26.104 | 521 | 326 | 17 | 286 | 769 | 167 | 665 | 5.72e-38 | 153 |
| MS.gene05017.t1 | MTR_0419s0010 | 74.576 | 59 | 15 | 0 | 747 | 805 | 12 | 70 | 2.50e-26 | 103 |
| MS.gene05017.t1 | MTR_4g021160 | 66.234 | 77 | 23 | 2 | 1 | 76 | 3 | 77 | 6.92e-25 | 99.4 |
| MS.gene05017.t1 | MTR_0277s0030 | 60.714 | 84 | 33 | 0 | 583 | 666 | 1 | 84 | 7.23e-25 | 104 |
| MS.gene05017.t1 | MTR_0277s0030 | 50.617 | 81 | 36 | 1 | 758 | 834 | 65 | 145 | 4.77e-20 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05017.t1 | AT1G73370 | 70.025 | 814 | 241 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1223 |
| MS.gene05017.t1 | AT1G73370 | 70.025 | 814 | 241 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1223 |
| MS.gene05017.t1 | AT5G37180 | 71.159 | 794 | 224 | 2 | 21 | 813 | 13 | 802 | 0.0 | 1204 |
| MS.gene05017.t1 | AT1G73370 | 71.299 | 770 | 221 | 0 | 46 | 815 | 1 | 770 | 0.0 | 1178 |
| MS.gene05017.t1 | AT5G37180 | 74.919 | 614 | 154 | 0 | 200 | 813 | 1 | 614 | 0.0 | 993 |
| MS.gene05017.t1 | AT4G02280 | 57.125 | 793 | 339 | 1 | 22 | 814 | 18 | 809 | 0.0 | 966 |
| MS.gene05017.t1 | AT5G49190 | 54.981 | 793 | 356 | 1 | 22 | 814 | 15 | 806 | 0.0 | 925 |
| MS.gene05017.t1 | AT5G49190 | 55.513 | 780 | 346 | 1 | 35 | 814 | 18 | 796 | 0.0 | 921 |
| MS.gene05017.t1 | AT3G43190 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 918 |
| MS.gene05017.t1 | AT3G43190 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 918 |
| MS.gene05017.t1 | AT5G37180 | 76.439 | 556 | 131 | 0 | 258 | 813 | 1 | 556 | 0.0 | 916 |
| MS.gene05017.t1 | AT5G20830 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 912 |
| MS.gene05017.t1 | AT5G20830 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 912 |
| MS.gene05017.t1 | AT5G20830 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 912 |
| MS.gene05017.t1 | AT5G49190 | 57.510 | 739 | 313 | 1 | 76 | 814 | 3 | 740 | 0.0 | 909 |
| MS.gene05017.t1 | AT5G11110 | 27.903 | 534 | 323 | 17 | 286 | 784 | 177 | 683 | 1.07e-38 | 156 |
| MS.gene05017.t1 | AT1G04920 | 27.091 | 550 | 328 | 21 | 286 | 790 | 172 | 693 | 2.25e-38 | 155 |
| MS.gene05017.t1 | AT5G20280 | 26.866 | 536 | 339 | 18 | 286 | 786 | 170 | 687 | 2.84e-37 | 151 |
| MS.gene05017.t1 | AT4G10120 | 27.027 | 518 | 321 | 18 | 286 | 770 | 23 | 516 | 7.81e-36 | 146 |
| MS.gene05017.t1 | AT4G10120 | 26.731 | 520 | 320 | 19 | 286 | 770 | 197 | 690 | 1.40e-35 | 146 |
| MS.gene05017.t1 | AT4G10120 | 26.731 | 520 | 320 | 19 | 286 | 770 | 197 | 690 | 1.40e-35 | 146 |
| MS.gene05017.t1 | AT4G10120 | 26.731 | 520 | 320 | 19 | 286 | 770 | 197 | 690 | 1.40e-35 | 146 |
| MS.gene05017.t1 | AT4G10120 | 26.761 | 497 | 309 | 16 | 305 | 770 | 17 | 489 | 2.26e-34 | 142 |
Find 175 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTTATGTTTAAGAATT+TGG | 0.104517 | 3.4:-66330505 | MS.gene05017:intron |
| TGCAAACAAGTTGCTGAATA+TGG | 0.128055 | 3.4:-66330604 | MS.gene05017:CDS |
| TTCTCAATTCATGGTTATTT+TGG | 0.152722 | 3.4:-66333178 | MS.gene05017:CDS |
| ATTACTGTTGATGGTGTTTC+TGG | 0.165228 | 3.4:-66330877 | MS.gene05017:CDS |
| AATGCACTTGAAGCAGATTT+TGG | 0.198635 | 3.4:-66333922 | MS.gene05017:CDS |
| CTTGCCATTGAGAAGATTAT+AGG | 0.209492 | 3.4:+66331267 | None:intergenic |
| TATCTTTGCTTTGCCACTTT+TGG | 0.224921 | 3.4:+66330543 | None:intergenic |
| GGACTATGCAGAGTTGTTTC+AGG | 0.262656 | 3.4:-66331562 | MS.gene05017:CDS |
| AATTTCATGGCTTCTGCATC+AGG | 0.265392 | 3.4:-66334848 | None:intergenic |
| AAATTACACTGATGGAAATT+TGG | 0.274664 | 3.4:-66332175 | MS.gene05017:CDS |
| TGAATAGGTTGTTTACATAT+TGG | 0.276020 | 3.4:-66332747 | MS.gene05017:intron |
| ATATTTGATTCCTATCATTC+TGG | 0.280201 | 3.4:+66334660 | None:intergenic |
| TTAAAATTGCCTTCTTCAAT+TGG | 0.283903 | 3.4:-66333874 | MS.gene05017:CDS |
| TTAAGAACTTTGAAACAAAA+TGG | 0.290010 | 3.4:+66333842 | None:intergenic |
| GTTGTGATCTTCTCAATTCA+TGG | 0.292026 | 3.4:-66333187 | MS.gene05017:CDS |
| AGGTAATCAGTGGATGTTAT+AGG | 0.295496 | 3.4:+66334110 | None:intergenic |
| CCTTGGTTCAAAATCATCAT+AGG | 0.298372 | 3.4:+66333431 | None:intergenic |
| AATTGAAGGGTCAATTTAGA+TGG | 0.298875 | 3.4:-66331071 | MS.gene05017:CDS |
| CAAATATTGGAAGGCAATCT+TGG | 0.312412 | 3.4:-66334644 | MS.gene05017:CDS |
| TATAATAAATCTTCAATTGT+AGG | 0.319514 | 3.4:+66331436 | None:intergenic |
| GTTACCTGTCCGCCGGTATC+TGG | 0.321700 | 3.4:+66333133 | None:intergenic |
| AAATTTGGCAGCTTCTCTTA+TGG | 0.323319 | 3.4:-66332160 | MS.gene05017:CDS |
| TAAGGCCAGACCCTGGAGTT+TGG | 0.328183 | 3.4:-66334172 | MS.gene05017:CDS |
| TTGCCTTCTTCAATTGGAAA+TGG | 0.328203 | 3.4:-66333868 | MS.gene05017:CDS |
| GGAAAACCAGATCTCATTAT+AGG | 0.331613 | 3.4:-66332198 | MS.gene05017:CDS |
| TTTGGTCAAGCAGATGTTCT+TGG | 0.337396 | 3.4:-66333160 | MS.gene05017:CDS |
| GAGAAGAGATGGCAGAAATA+AGG | 0.340112 | 3.4:-66331122 | MS.gene05017:CDS |
| TTCCAATTCCTGATTGCATT+TGG | 0.342271 | 3.4:+66332512 | None:intergenic |
| CCTGCTTTGTATGAAGCATT+TGG | 0.348320 | 3.4:-66330970 | MS.gene05017:CDS |
| ATATTCTTTCCTTGAATTTG+AGG | 0.349412 | 3.4:+66334090 | None:intergenic |
| CATTTGGTTCCTTGAGCATC+AGG | 0.353289 | 3.4:+66332528 | None:intergenic |
| TGCTGCTTGGAGTTGGGCAC+TGG | 0.355202 | 3.4:+66330370 | None:intergenic |
| TTCTCCATGTTCATTGGATC+TGG | 0.357587 | 3.4:+66333241 | None:intergenic |
| TTTGCTACTGCAGGCGTTCA+AGG | 0.369565 | 3.4:-66330160 | MS.gene05017:intron |
| GAGACTCTGCTGCTTGGAGT+TGG | 0.376714 | 3.4:+66330363 | None:intergenic |
| AACCAAATGCAATCAGGAAT+TGG | 0.378445 | 3.4:-66332514 | MS.gene05017:CDS |
| AGAAATGGAGCAAGTTATAA+AGG | 0.380139 | 3.4:-66334684 | MS.gene05017:CDS |
| CAATTGTATCGGCCATGAAT+TGG | 0.380384 | 3.4:+66331884 | None:intergenic |
| TCATGATTTGATGGAAGAAA+TGG | 0.387496 | 3.4:-66334699 | MS.gene05017:CDS |
| GAATGATAGGAATCAAATAT+TGG | 0.388211 | 3.4:-66334657 | MS.gene05017:CDS |
| TCACCAAATTCTTAAACATA+AGG | 0.390237 | 3.4:+66330502 | None:intergenic |
| AAGGCCAGACCCTGGAGTTT+GGG | 0.391013 | 3.4:-66334171 | MS.gene05017:CDS |
| CATCATAACCAGCACATATC+AGG | 0.395020 | 3.4:-66331842 | MS.gene05017:CDS |
| GGTTGTTGAGGTTCATCAAT+TGG | 0.407027 | 3.4:+66330391 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+AGG | 0.408099 | 3.4:-66331174 | MS.gene05017:CDS |
| CATAAAAGTTCATGATTTGA+TGG | 0.411962 | 3.4:-66334708 | MS.gene05017:CDS |
| TGGCAAAGCAAAGATACATT+TGG | 0.414762 | 3.4:-66330536 | MS.gene05017:CDS |
| TCACTTCTCATGCCAATTCA+TGG | 0.415497 | 3.4:-66331896 | MS.gene05017:CDS |
| TGTAAGGAAAATAGACAGTT+TGG | 0.415507 | 3.4:+66331491 | None:intergenic |
| GATAACAAGTAGTCCAATAT+AGG | 0.417385 | 3.4:+66333784 | None:intergenic |
| GCCATACCATTCAACTAAAC+CGG | 0.419547 | 3.4:+66331221 | None:intergenic |
| TCTACCTTTCTCAAGGTACT+TGG | 0.421092 | 3.4:+66334736 | None:intergenic |
| CTCCATTGAGAGGATCGATA+TGG | 0.425897 | 3.4:+66330851 | None:intergenic |
| ACATAACCGGTTTAGTTGAA+TGG | 0.426363 | 3.4:-66331227 | MS.gene05017:CDS |
| AGACTCTGCTGCTTGGAGTT+GGG | 0.431324 | 3.4:+66330364 | None:intergenic |
| CACTGATTACCTCAAATTCA+AGG | 0.432595 | 3.4:-66334099 | MS.gene05017:CDS |
| TTATAAAGGACCAGAATGAT+AGG | 0.436409 | 3.4:-66334670 | MS.gene05017:CDS |
| GCGTTCAAGGTCCAGATCAC+AGG | 0.438873 | 3.4:-66330147 | MS.gene05017:CDS |
| AGCACATATCAGGAAATTGC+TGG | 0.441509 | 3.4:-66331832 | MS.gene05017:CDS |
| TGGCATGAGAAGTGATACTT+AGG | 0.443770 | 3.4:+66331904 | None:intergenic |
| CGATTTATTGCCGACACAAA+GGG | 0.445300 | 3.4:-66331006 | MS.gene05017:CDS |
| GAAGCTTTGCAACTGAGCTC+AGG | 0.445828 | 3.4:+66333508 | None:intergenic |
| AGCAATTTCCTGATATGTGC+TGG | 0.445998 | 3.4:+66331834 | None:intergenic |
| CTACTCTGCTTGGATGCATC+TGG | 0.446134 | 3.4:+66334782 | None:intergenic |
| GAGTGCTTGGTATCAATGAT+TGG | 0.446392 | 3.4:+66332489 | None:intergenic |
| TAATTTCCTATAATGAGATC+TGG | 0.449484 | 3.4:+66332192 | None:intergenic |
| AAACATACCACAAGAATTTG+AGG | 0.450197 | 3.4:+66332659 | None:intergenic |
| ATTGGATCAAGTGAGAGCTT+TGG | 0.450839 | 3.4:-66332729 | MS.gene05017:CDS |
| ATAAAGGAATCCTGCGTCAA+TGG | 0.450947 | 3.4:-66332437 | MS.gene05017:CDS |
| CATTCATAGGTTTAAGCAGT+GGG | 0.453853 | 3.4:-66333341 | MS.gene05017:intron |
| CTCTTATGGCTAGCAAACTT+AGG | 0.458904 | 3.4:-66332146 | MS.gene05017:CDS |
| CATATGTTGCCTTTGCAGTA+AGG | 0.461366 | 3.4:-66334190 | MS.gene05017:CDS |
| TGTTCATTGGATCTGGAGCT+TGG | 0.464347 | 3.4:+66333248 | None:intergenic |
| ATTCCTTTATCTGTCTGAAA+AGG | 0.464552 | 3.4:+66332450 | None:intergenic |
| GCATGGCTTTCATATTGTCC+AGG | 0.464964 | 3.4:+66331601 | None:intergenic |
| TTGATCTTAACCCTGTGATC+TGG | 0.465172 | 3.4:+66330136 | None:intergenic |
| GTTCTTGGCTTGCCAGATAC+CGG | 0.467570 | 3.4:-66333145 | MS.gene05017:CDS |
| CCAGCGGAAATTACTGTTGA+TGG | 0.471975 | 3.4:-66330886 | MS.gene05017:CDS |
| GCAAACAAGTTGCTGAATAT+GGG | 0.473370 | 3.4:-66330603 | MS.gene05017:CDS |
| TTGGTGAACCTTGTCATAGT+TGG | 0.474389 | 3.4:-66331177 | MS.gene05017:CDS |
| ATCACAACATTGAATATTGT+GGG | 0.477811 | 3.4:+66333202 | None:intergenic |
| TCAAGGAACCAAATGCAATC+AGG | 0.478957 | 3.4:-66332520 | MS.gene05017:CDS |
| GATGTTGTGAAGAACATAAC+CGG | 0.480452 | 3.4:-66331240 | MS.gene05017:CDS |
| AATTGAAAAGTATCAATTGA+AGG | 0.483871 | 3.4:-66331085 | MS.gene05017:CDS |
| AATGGTATGGCAAGAACAAA+AGG | 0.484935 | 3.4:-66331209 | MS.gene05017:CDS |
| GATCACAACATTGAATATTG+TGG | 0.486777 | 3.4:+66333201 | None:intergenic |
| TAAAGGAATCCTGCGTCAAT+GGG | 0.489529 | 3.4:-66332436 | MS.gene05017:CDS |
| TTCCATATCGATCCTCTCAA+TGG | 0.492417 | 3.4:-66330853 | MS.gene05017:CDS |
| AAAACCTATAATCTTCTCAA+TGG | 0.494217 | 3.4:-66331271 | MS.gene05017:CDS |
| GACTATGCAGAGTTGTTTCA+GGG | 0.497122 | 3.4:-66331561 | MS.gene05017:CDS |
| TTTACATATTCCCAAACTCC+AGG | 0.498127 | 3.4:+66334161 | None:intergenic |
| GAACAAAAGGTTGAGAAGCT+TGG | 0.499509 | 3.4:-66331196 | MS.gene05017:CDS |
| GAAACAACTCTGCATAGTCC+TGG | 0.499572 | 3.4:+66331565 | None:intergenic |
| TATTCCCAAACTCCAGGGTC+TGG | 0.501451 | 3.4:+66334167 | None:intergenic |
| AGTACCTTGAGAAAGGTAGA+AGG | 0.502369 | 3.4:-66334733 | MS.gene05017:CDS |
| ACCGGTTTAGTTGAATGGTA+TGG | 0.505203 | 3.4:-66331222 | MS.gene05017:CDS |
| ATCAAAAGACAGAGAAGAGA+TGG | 0.505369 | 3.4:-66331133 | MS.gene05017:CDS |
| CTCTCCATTGCGATGTCTAT+CGG | 0.511081 | 3.4:+66331035 | None:intergenic |
| CTTACTGCAAAGGCAACATA+TGG | 0.514465 | 3.4:+66334191 | None:intergenic |
| ATTGAAAAGTATCAATTGAA+GGG | 0.514770 | 3.4:-66331084 | MS.gene05017:CDS |
| TCATCATAGGGAGTATCCAC+TGG | 0.521258 | 3.4:+66333444 | None:intergenic |
| CAGCAGAGTCTCAGAAAACA+AGG | 0.523143 | 3.4:-66330352 | MS.gene05017:CDS |
| TTTGCCAAGTACCTTGAGAA+AGG | 0.524246 | 3.4:-66334740 | MS.gene05017:CDS |
| CTTGCCAGATACCGGCGGAC+AGG | 0.524415 | 3.4:-66333137 | MS.gene05017:intron |
| TGCATTCATTGCAATTGTAT+CGG | 0.531501 | 3.4:+66331873 | None:intergenic |
| AGTCCATTTCCAATTGAAGA+AGG | 0.532379 | 3.4:+66333865 | None:intergenic |
| AGTGAATAATGAACCAAAAG+TGG | 0.533551 | 3.4:-66330556 | MS.gene05017:CDS |
| CTTGAATTTGAGGTAATCAG+TGG | 0.533653 | 3.4:+66334100 | None:intergenic |
| CTTGGTTCAAAATCATCATA+GGG | 0.534597 | 3.4:+66333432 | None:intergenic |
| AACTAAGATTCTCAACCTCA+TGG | 0.538311 | 3.4:-66332223 | MS.gene05017:CDS |
| TGATCCTTCTACCTTTCTCA+AGG | 0.540900 | 3.4:+66334729 | None:intergenic |
| ATTTCATGGCTTCTGCATCA+GGG | 0.540993 | 3.4:-66334847 | None:intergenic |
| CTTGATTCGTCTCCATTGAG+AGG | 0.541337 | 3.4:+66330841 | None:intergenic |
| TGAGTAAACCTCTCAAGATA+AGG | 0.545448 | 3.4:+66332393 | None:intergenic |
| TGGAACATGATTTCAGCGGC+AGG | 0.548654 | 3.4:-66330769 | MS.gene05017:CDS |
| CCAAATGCTTCATACAAAGC+AGG | 0.548728 | 3.4:+66330970 | None:intergenic |
| TTATCTTGAGAGGTTTACTC+AGG | 0.550480 | 3.4:-66332391 | MS.gene05017:intron |
| ATTATAGGAAATTACACTGA+TGG | 0.553471 | 3.4:-66332183 | MS.gene05017:CDS |
| ACATTTATCCTTATCTTGAG+AGG | 0.554628 | 3.4:-66332401 | MS.gene05017:CDS |
| GGTGCAGCTATGTTGAACTT+AGG | 0.558768 | 3.4:+66331523 | None:intergenic |
| GATAGGAATCAAATATTGGA+AGG | 0.559030 | 3.4:-66334653 | MS.gene05017:CDS |
| ATGAAGATTCAGATGTCAAG+TGG | 0.562035 | 3.4:-66331939 | MS.gene05017:CDS |
| TAGACAGTTTGGTCAGCACC+AGG | 0.562574 | 3.4:+66331502 | None:intergenic |
| GATTGCAGCGTATTAATGAA+TGG | 0.564848 | 3.4:-66330747 | MS.gene05017:intron |
| GAGTTGGGCACTGGTTGTTG+AGG | 0.565117 | 3.4:+66330379 | None:intergenic |
| CTCAGTTGCAAAGCTTCAGA+TGG | 0.565623 | 3.4:-66333502 | MS.gene05017:CDS |
| CATATGATACCTACTCTGCT+TGG | 0.567145 | 3.4:+66334772 | None:intergenic |
| CTATAATCTTCTCAATGGCA+AGG | 0.572371 | 3.4:-66331266 | MS.gene05017:CDS |
| ATAAATCTTCAATTGTAGGA+TGG | 0.578371 | 3.4:+66331440 | None:intergenic |
| AAGATTCTCAACCTCATGGA+AGG | 0.580091 | 3.4:-66332219 | MS.gene05017:CDS |
| AGGGTCTGGCCTTACTGCAA+AGG | 0.580872 | 3.4:+66334181 | None:intergenic |
| TAGAAATGTTACCTGTCCGC+CGG | 0.582278 | 3.4:+66333126 | None:intergenic |
| CCATGGTTAGTAGCAAAAGT+TGG | 0.583413 | 3.4:+66330913 | None:intergenic |
| AAACAACTCTGCATAGTCCT+GGG | 0.585010 | 3.4:+66331566 | None:intergenic |
| TCGATTTATTGCCGACACAA+AGG | 0.585397 | 3.4:-66331007 | MS.gene05017:CDS |
| AAGTTCAACATAGCTGCACC+TGG | 0.586850 | 3.4:-66331520 | MS.gene05017:CDS |
| CCATCAACAGTAATTTCCGC+TGG | 0.588157 | 3.4:+66330886 | None:intergenic |
| TCAGAAAACAAGGAACAAGC+AGG | 0.590337 | 3.4:-66330342 | MS.gene05017:intron |
| AAGCTTTGCAACTGAGCTCA+GGG | 0.590368 | 3.4:+66333509 | None:intergenic |
| CATGCAACATTTACACTCCC+AGG | 0.590537 | 3.4:-66331583 | MS.gene05017:CDS |
| ACTGCAAAGGCAACATATGG+TGG | 0.591779 | 3.4:+66334194 | None:intergenic |
| CAGATGCATCCAAGCAGAGT+AGG | 0.592157 | 3.4:-66334781 | MS.gene05017:CDS |
| TTGTTATCACTAAATCATCA+AGG | 0.594692 | 3.4:-66333769 | MS.gene05017:CDS |
| AGCTCCAGATCCAATGAACA+TGG | 0.595996 | 3.4:-66333245 | MS.gene05017:CDS |
| TTAGTTAGAATTAAGCAGCA+AGG | 0.596666 | 3.4:-66332695 | MS.gene05017:CDS |
| AGTGGATGGGGAGATACTGC+AGG | 0.599037 | 3.4:-66333310 | MS.gene05017:CDS |
| AGATACTGCAGGAAGAGTGA+AGG | 0.602197 | 3.4:-66333299 | MS.gene05017:CDS |
| AGAGTAGGTATCATATGAAG+AGG | 0.603076 | 3.4:-66334766 | MS.gene05017:CDS |
| TTACATATTCCCAAACTCCA+GGG | 0.604096 | 3.4:+66334162 | None:intergenic |
| AGCGAGAAACCCATTGACGC+AGG | 0.604373 | 3.4:+66332427 | None:intergenic |
| CGTTCAAGGTCCAGATCACA+GGG | 0.611161 | 3.4:-66330146 | MS.gene05017:CDS |
| TTTGCAGTAAGGCCAGACCC+TGG | 0.611570 | 3.4:-66334179 | MS.gene05017:CDS |
| GTAAAGTGGATTCGACACAT+TGG | 0.612673 | 3.4:-66330789 | MS.gene05017:CDS |
| AGTGAATCCTCAAATTCTTG+TGG | 0.613261 | 3.4:-66332666 | MS.gene05017:intron |
| TAGCAAACTTAGGATAACTC+AGG | 0.614245 | 3.4:-66332136 | MS.gene05017:intron |
| GCTTGCAGCAAAGATAAACC+TGG | 0.616014 | 3.4:-66331619 | MS.gene05017:intron |
| GGCATGAGAAGTGATACTTA+GGG | 0.616329 | 3.4:+66331905 | None:intergenic |
| TACTAACCATGGTGGTCCAG+CGG | 0.618133 | 3.4:-66330902 | MS.gene05017:CDS |
| TATCCACTGGAAGTGCTGAA+AGG | 0.620301 | 3.4:+66333457 | None:intergenic |
| AGGCTCATACCTGATGCTCA+AGG | 0.620828 | 3.4:-66332537 | MS.gene05017:CDS |
| CACAAAAGCTCCCTTTGTGT+CGG | 0.624836 | 3.4:+66330996 | None:intergenic |
| TCATTCATAGGTTTAAGCAG+TGG | 0.624989 | 3.4:-66333342 | MS.gene05017:intron |
| GCTTCAGATGGCACTAACAG+TGG | 0.628405 | 3.4:-66333490 | MS.gene05017:CDS |
| CTGGGAGTGTAAATGTTGCA+TGG | 0.644191 | 3.4:+66331584 | None:intergenic |
| CTTGGCTTGCCAGATACCGG+CGG | 0.648157 | 3.4:-66333142 | MS.gene05017:CDS |
| CATATCAGGAAATTGCTGGA+AGG | 0.653215 | 3.4:-66331828 | MS.gene05017:intron |
| ATTCCTTTCAGCACTTCCAG+TGG | 0.655307 | 3.4:-66333460 | MS.gene05017:CDS |
| GTTGACAATGATAGGTCACA+AGG | 0.660394 | 3.4:-66332557 | MS.gene05017:intron |
| ACATTGGAACATGATTTCAG+CGG | 0.663048 | 3.4:-66330773 | MS.gene05017:CDS |
| ATTCATAGGTTTAAGCAGTG+GGG | 0.679591 | 3.4:-66333340 | MS.gene05017:intron |
| GAGGTTGAGAATCTTAGTTG+TGG | 0.682574 | 3.4:+66332227 | None:intergenic |
| CAGACCGATAGACATCGCAA+TGG | 0.696451 | 3.4:-66331039 | MS.gene05017:CDS |
| TAATTTCCGCTGGACCACCA+TGG | 0.697345 | 3.4:+66330896 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.698242 | 3.4:-66330940 | MS.gene05017:CDS |
| AGAAGCCTCCAACTATGACA+AGG | 0.698799 | 3.4:+66331169 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGAAGAAACTATAAA+AGG | - | chr3.4:66333307-66333326 | MS.gene05017:CDS | 15.0% |
| !! | ATATTAAGAAAAATAGTAGA+TGG | - | chr3.4:66330595-66330614 | MS.gene05017:CDS | 15.0% |
| !! | TATAATAAATCTTCAATTGT+AGG | + | chr3.4:66333551-66333570 | None:intergenic | 15.0% |
| !!! | AAAAGTATAGTATAAGTAAA+AGG | + | chr3.4:66330942-66330961 | None:intergenic | 15.0% |
| !!! | TTGTTTTTCTTTTAATTATG+AGG | + | chr3.4:66333187-66333206 | None:intergenic | 15.0% |
| !! | AGCAAAAAAAAAATGCAAAT+TGG | + | chr3.4:66330404-66330423 | None:intergenic | 20.0% |
| !! | AGTTAACCATTAAAAATTGT+TGG | + | chr3.4:66331013-66331032 | None:intergenic | 20.0% |
| !! | ATGCTAAAAATCAATTGTAA+AGG | + | chr3.4:66332033-66332052 | None:intergenic | 20.0% |
| !! | CAAGTTTATTATGTATAGAA+AGG | + | chr3.4:66332371-66332390 | None:intergenic | 20.0% |
| !! | CATAGGCTTATTAATTAATA+TGG | - | chr3.4:66330736-66330755 | MS.gene05017:intron | 20.0% |
| !! | CTATAAACTAATTTACATTG+TGG | - | chr3.4:66330422-66330441 | MS.gene05017:intron | 20.0% |
| !! | TAACCTTATGTTTAAGAATT+TGG | - | chr3.4:66334479-66334498 | MS.gene05017:intron | 20.0% |
| !! | TAATCCTAAGTTTCAATAAT+AGG | + | chr3.4:66332881-66332900 | None:intergenic | 20.0% |
| !! | TCATTATTTATGCAAGAATA+TGG | - | chr3.4:66332403-66332422 | MS.gene05017:CDS | 20.0% |
| !! | TTAAACCTATGAATGAAAAT+AGG | + | chr3.4:66331638-66331657 | None:intergenic | 20.0% |
| !! | TTAAATAAATTTAGACAACG+TGG | + | chr3.4:66330561-66330580 | None:intergenic | 20.0% |
| !!! | AATTGAAAAGTATCAATTGA+AGG | - | chr3.4:66333899-66333918 | MS.gene05017:CDS | 20.0% |
| !!! | ACAATTTTTAATGGTTAACT+TGG | - | chr3.4:66331013-66331032 | MS.gene05017:CDS | 20.0% |
| !!! | ATTGAAAAGTATCAATTGAA+GGG | - | chr3.4:66333900-66333919 | MS.gene05017:CDS | 20.0% |
| !!! | CAAATATATCTAAAGCAATA+TGG | + | chr3.4:66330626-66330645 | None:intergenic | 20.0% |
| !!! | CAATTTTTAATGGTTAACTT+GGG | - | chr3.4:66331014-66331033 | MS.gene05017:CDS | 20.0% |
| !!! | CATATTGCTTTAGATATATT+TGG | - | chr3.4:66330624-66330643 | MS.gene05017:CDS | 20.0% |
| !!! | GTAATTTTGTAATGTACTTT+TGG | - | chr3.4:66331398-66331417 | MS.gene05017:intron | 20.0% |
| !!! | TTAAGAACTTTGAAACAAAA+TGG | + | chr3.4:66331145-66331164 | None:intergenic | 20.0% |
| !!! | TTTCTTTGAAAAATGTAAAG+TGG | - | chr3.4:66334181-66334200 | MS.gene05017:CDS | 20.0% |
| ! | AAAACCTATAATCTTCTCAA+TGG | - | chr3.4:66333713-66333732 | MS.gene05017:intron | 25.0% |
| ! | AAAGAATATACGACCAAAAA+TGG | - | chr3.4:66330908-66330927 | MS.gene05017:CDS | 25.0% |
| ! | AAATTACACTGATGGAAATT+TGG | - | chr3.4:66332809-66332828 | MS.gene05017:intron | 25.0% |
| ! | ATAAATCTTCAATTGTAGGA+TGG | + | chr3.4:66333547-66333566 | None:intergenic | 25.0% |
| ! | ATATTCTTTCCTTGAATTTG+AGG | + | chr3.4:66330897-66330916 | None:intergenic | 25.0% |
| ! | ATATTTGATTCCTATCATTC+TGG | + | chr3.4:66330327-66330346 | None:intergenic | 25.0% |
| ! | ATCACAACATTGAATATTGT+GGG | + | chr3.4:66331785-66331804 | None:intergenic | 25.0% |
| ! | ATTATAGGAAATTACACTGA+TGG | - | chr3.4:66332801-66332820 | MS.gene05017:intron | 25.0% |
| ! | CATAAAAGTTCATGATTTGA+TGG | - | chr3.4:66330276-66330295 | MS.gene05017:intron | 25.0% |
| ! | CTATCCTATTATTGAAACTT+AGG | - | chr3.4:66332874-66332893 | MS.gene05017:intron | 25.0% |
| ! | GAATGATAGGAATCAAATAT+TGG | - | chr3.4:66330327-66330346 | MS.gene05017:intron | 25.0% |
| ! | GGTAACAAAAATTGTTGAAT+AGG | + | chr3.4:66332935-66332954 | None:intergenic | 25.0% |
| ! | GTTATATGTCATTGTTTCAT+AGG | - | chr3.4:66330719-66330738 | MS.gene05017:intron | 25.0% |
| ! | TAACATCAACAACAAAAGAA+TGG | + | chr3.4:66333617-66333636 | None:intergenic | 25.0% |
| ! | TAATTTACATTGTGGAAAGA+CGG | - | chr3.4:66330430-66330449 | MS.gene05017:intron | 25.0% |
| ! | TAATTTCCTATAATGAGATC+TGG | + | chr3.4:66332795-66332814 | None:intergenic | 25.0% |
| ! | TCACCAAATTCTTAAACATA+AGG | + | chr3.4:66334485-66334504 | None:intergenic | 25.0% |
| ! | TGAATAGGTTGTTTACATAT+TGG | - | chr3.4:66332237-66332256 | MS.gene05017:intron | 25.0% |
| ! | TGAATGTAAACTGATATGTT+TGG | + | chr3.4:66332093-66332112 | None:intergenic | 25.0% |
| ! | TTAAAATTGCCTTCTTCAAT+TGG | - | chr3.4:66331110-66331129 | MS.gene05017:CDS | 25.0% |
| ! | TTCTTATATGTAAATGTCAC+AGG | - | chr3.4:66334553-66334572 | MS.gene05017:intron | 25.0% |
| ! | TTGTTATCACTAAATCATCA+AGG | - | chr3.4:66331215-66331234 | MS.gene05017:CDS | 25.0% |
| !! | AACAATTTTTGTTACCCTTA+AGG | - | chr3.4:66332939-66332958 | MS.gene05017:intron | 25.0% |
| !! | ACAATCCTATTTTCATTCAT+AGG | - | chr3.4:66331630-66331649 | MS.gene05017:intron | 25.0% |
| !! | TAAAAATTGTTGGCTAATCA+AGG | + | chr3.4:66331003-66331022 | None:intergenic | 25.0% |
| !! | TATATCTAAAGCAATATGGT+CGG | + | chr3.4:66330622-66330641 | None:intergenic | 25.0% |
| !! | TGATTAATTTTCTCTTACAG+TGG | - | chr3.4:66333672-66333691 | MS.gene05017:intron | 25.0% |
| !! | TTCTCAATTCATGGTTATTT+TGG | - | chr3.4:66331806-66331825 | MS.gene05017:intron | 25.0% |
| !! | TTCTTAACTTTACGTTTTAG+TGG | - | chr3.4:66331158-66331177 | MS.gene05017:CDS | 25.0% |
| !!! | AATTTTGACTCCTCTAAAAA+TGG | + | chr3.4:66331921-66331940 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTTCAGTTATACA+TGG | - | chr3.4:66334349-66334368 | MS.gene05017:intron | 25.0% |
| !!! | GATTAGCCAACAATTTTTAA+TGG | - | chr3.4:66331004-66331023 | MS.gene05017:CDS | 25.0% |
| !!! | TCTTAACTTTACGTTTTAGT+GGG | - | chr3.4:66331159-66331178 | MS.gene05017:CDS | 25.0% |
| AAAAACTTCTCCATGTTCAT+TGG | + | chr3.4:66331752-66331771 | None:intergenic | 30.0% | |
| AAACATACCACAAGAATTTG+AGG | + | chr3.4:66332328-66332347 | None:intergenic | 30.0% | |
| AACATTGAATCAAGATTGCA+TGG | - | chr3.4:66334326-66334345 | MS.gene05017:intron | 30.0% | |
| AAGCACATGTTAAATGAATG+TGG | - | chr3.4:66332183-66332202 | MS.gene05017:CDS | 30.0% | |
| AATTGAAGGGTCAATTTAGA+TGG | - | chr3.4:66333913-66333932 | MS.gene05017:CDS | 30.0% | |
| AATTTACATTGTGGAAAGAC+GGG | - | chr3.4:66330431-66330450 | MS.gene05017:intron | 30.0% | |
| ACATTCATTTAACATGTGCT+TGG | + | chr3.4:66332184-66332203 | None:intergenic | 30.0% | |
| ACATTTATCCTTATCTTGAG+AGG | - | chr3.4:66332583-66332602 | MS.gene05017:intron | 30.0% | |
| AGAAATGGAGCAAGTTATAA+AGG | - | chr3.4:66330300-66330319 | MS.gene05017:intron | 30.0% | |
| AGTAAAAAGGACATCCTTAA+GGG | + | chr3.4:66332956-66332975 | None:intergenic | 30.0% | |
| AGTGAATAATGAACCAAAAG+TGG | - | chr3.4:66334428-66334447 | MS.gene05017:intron | 30.0% | |
| ATTCCTTTATCTGTCTGAAA+AGG | + | chr3.4:66332537-66332556 | None:intergenic | 30.0% | |
| CGACAAAAAATACTGATAGA+CGG | + | chr3.4:66330468-66330487 | None:intergenic | 30.0% | |
| CTTGGTTCAAAATCATCATA+GGG | + | chr3.4:66331555-66331574 | None:intergenic | 30.0% | |
| GACAAAAAATACTGATAGAC+GGG | + | chr3.4:66330467-66330486 | None:intergenic | 30.0% | |
| GATAACAAGTAGTCCAATAT+AGG | + | chr3.4:66331203-66331222 | None:intergenic | 30.0% | |
| GATAGGAATCAAATATTGGA+AGG | - | chr3.4:66330331-66330350 | MS.gene05017:intron | 30.0% | |
| GATCACAACATTGAATATTG+TGG | + | chr3.4:66331786-66331805 | None:intergenic | 30.0% | |
| GTCAAAATTTCTCGATTGAT+TGG | + | chr3.4:66334676-66334695 | None:intergenic | 30.0% | |
| TAACTTGGGTTTATGTTGTA+GGG | - | chr3.4:66331028-66331047 | MS.gene05017:CDS | 30.0% | |
| TATTAGCTCATGCAGTAAAA+AGG | + | chr3.4:66332969-66332988 | None:intergenic | 30.0% | |
| TCATGATTTGATGGAAGAAA+TGG | - | chr3.4:66330285-66330304 | MS.gene05017:intron | 30.0% | |
| TGCATTCATTGCAATTGTAT+CGG | + | chr3.4:66333114-66333133 | None:intergenic | 30.0% | |
| TGTAAGGAAAATAGACAGTT+TGG | + | chr3.4:66333496-66333515 | None:intergenic | 30.0% | |
| TTAGTTAGAATTAAGCAGCA+AGG | - | chr3.4:66332289-66332308 | MS.gene05017:intron | 30.0% | |
| TTATAAAGGACCAGAATGAT+AGG | - | chr3.4:66330314-66330333 | MS.gene05017:intron | 30.0% | |
| TTGGATGCATTCACTTAAAA+GGG | + | chr3.4:66332074-66332093 | None:intergenic | 30.0% | |
| TTTGGATGCATTCACTTAAA+AGG | + | chr3.4:66332075-66332094 | None:intergenic | 30.0% | |
| ! | AAAGGACATAGTACCATTTT+TGG | + | chr3.4:66330924-66330943 | None:intergenic | 30.0% |
| ! | ATGTGATGAGAATTTGAGAT+AGG | - | chr3.4:66334524-66334543 | MS.gene05017:intron | 30.0% |
| ! | CTAATCTAGAGCTAGTAAAT+TGG | + | chr3.4:66334278-66334297 | None:intergenic | 30.0% |
| ! | CTTCTTACTAAGTTTTACAC+AGG | - | chr3.4:66330363-66330382 | MS.gene05017:CDS | 30.0% |
| ! | GCTTTTCTACAATCTTGAAT+AGG | - | chr3.4:66332222-66332241 | MS.gene05017:CDS | 30.0% |
| ! | TTAACTTGGGTTTATGTTGT+AGG | - | chr3.4:66331027-66331046 | MS.gene05017:CDS | 30.0% |
| !! | AATATGGTGTTGACAATGAT+AGG | - | chr3.4:66332419-66332438 | MS.gene05017:CDS | 30.0% |
| !! | ATATGGATTTTAATGCTTGC+AGG | - | chr3.4:66330753-66330772 | MS.gene05017:CDS | 30.0% |
| !! | ATCACTGATTTCCAAAACAT+TGG | + | chr3.4:66331303-66331322 | None:intergenic | 30.0% |
| !! | GAAGCATTTATACTTTTTGG+AGG | - | chr3.4:66334403-66334422 | MS.gene05017:intron | 30.0% |
| !! | GTACGTTGTGTTCTAAAAAT+TGG | + | chr3.4:66331370-66331389 | None:intergenic | 30.0% |
| !! | GTGTTTAGTTCCATTTTTAG+AGG | - | chr3.4:66331908-66331927 | MS.gene05017:CDS | 30.0% |
| !! | TTTACGTTTTAGTGGGAAAT+TGG | - | chr3.4:66331166-66331185 | MS.gene05017:CDS | 30.0% |
| !!! | GAAGAAGGCAATTTTAAGTT+AGG | + | chr3.4:66331107-66331126 | None:intergenic | 30.0% |
| !!! | GGCAATTTTAAGTTAGGAAT+AGG | + | chr3.4:66331101-66331120 | None:intergenic | 30.0% |
| !!! | TCTCTGTCTTTTGATTTCAA+AGG | + | chr3.4:66333846-66333865 | None:intergenic | 30.0% |
| !!! | TGGGAAGCATTTATACTTTT+TGG | - | chr3.4:66334400-66334419 | MS.gene05017:intron | 30.0% |
| AAATTTGGCAGCTTCTCTTA+TGG | - | chr3.4:66332824-66332843 | MS.gene05017:intron | 35.0% | |
| AACCAAATGCAATCAGGAAT+TGG | - | chr3.4:66332470-66332489 | MS.gene05017:CDS | 35.0% | |
| AACTAAGATTCTCAACCTCA+TGG | - | chr3.4:66332761-66332780 | MS.gene05017:intron | 35.0% | |
| AAGTGCAAAGAGATTTACCT+TGG | + | chr3.4:66331573-66331592 | None:intergenic | 35.0% | |
| AATGGTATGGCAAGAACAAA+AGG | - | chr3.4:66333775-66333794 | MS.gene05017:CDS | 35.0% | |
| ACATTGGAACATGATTTCAG+CGG | - | chr3.4:66334211-66334230 | MS.gene05017:CDS | 35.0% | |
| ACTGCATGAGCTAATAAATG+AGG | - | chr3.4:66332973-66332992 | MS.gene05017:intron | 35.0% | |
| AGAGTAGGTATCATATGAAG+AGG | - | chr3.4:66330218-66330237 | MS.gene05017:intron | 35.0% | |
| AGGTAATCAGTGGATGTTAT+AGG | + | chr3.4:66330877-66330896 | None:intergenic | 35.0% | |
| AGTCCATTTCCAATTGAAGA+AGG | + | chr3.4:66331122-66331141 | None:intergenic | 35.0% | |
| AGTGAATCCTCAAATTCTTG+TGG | - | chr3.4:66332318-66332337 | MS.gene05017:intron | 35.0% | |
| AGTTCTTCGGTTCATGTTAT+AGG | - | chr3.4:66332731-66332750 | MS.gene05017:CDS | 35.0% | |
| ATCAAAAGACAGAGAAGAGA+TGG | - | chr3.4:66333851-66333870 | MS.gene05017:CDS | 35.0% | |
| ATCCTGCATTTGATGAGATA+TGG | - | chr3.4:66332645-66332664 | MS.gene05017:intron | 35.0% | |
| ATGAAGATTCAGATGTCAAG+TGG | - | chr3.4:66333045-66333064 | MS.gene05017:intron | 35.0% | |
| ATTCATAGGTTTAAGCAGTG+GGG | - | chr3.4:66331644-66331663 | MS.gene05017:intron | 35.0% | |
| CAAATATTGGAAGGCAATCT+TGG | - | chr3.4:66330340-66330359 | MS.gene05017:intron | 35.0% | |
| CAGCGTATTAATGAATGGTA+AGG | - | chr3.4:66334242-66334261 | MS.gene05017:intron | 35.0% | |
| CAGTAAAAAGGACATCCTTA+AGG | + | chr3.4:66332957-66332976 | None:intergenic | 35.0% | |
| CATTCATAGGTTTAAGCAGT+GGG | - | chr3.4:66331643-66331662 | MS.gene05017:intron | 35.0% | |
| CCTTGGTTCAAAATCATCAT+AGG | + | chr3.4:66331556-66331575 | None:intergenic | 35.0% | |
| CTATAATCTTCTCAATGGCA+AGG | - | chr3.4:66333718-66333737 | MS.gene05017:intron | 35.0% | |
| CTTGCCATTGAGAAGATTAT+AGG | + | chr3.4:66333720-66333739 | None:intergenic | 35.0% | |
| GATGTTGTGAAGAACATAAC+CGG | - | chr3.4:66333744-66333763 | MS.gene05017:intron | 35.0% | |
| GATTGCAGCGTATTAATGAA+TGG | - | chr3.4:66334237-66334256 | MS.gene05017:intron | 35.0% | |
| GCAAACAAGTTGCTGAATAT+GGG | - | chr3.4:66334381-66334400 | MS.gene05017:intron | 35.0% | |
| GGAAAACCAGATCTCATTAT+AGG | - | chr3.4:66332786-66332805 | MS.gene05017:intron | 35.0% | |
| GGCAAAAACACAACCTATAT+TGG | - | chr3.4:66331187-66331206 | MS.gene05017:CDS | 35.0% | |
| GTGAAAACGCGTTTATAAGT+TGG | - | chr3.4:66332669-66332688 | MS.gene05017:CDS | 35.0% | |
| GTTATGGTTCAATCACAGTT+CGG | - | chr3.4:66331343-66331362 | MS.gene05017:intron | 35.0% | |
| GTTGTGATCTTCTCAATTCA+TGG | - | chr3.4:66331797-66331816 | MS.gene05017:intron | 35.0% | |
| TAGCAAACTTAGGATAACTC+AGG | - | chr3.4:66332848-66332867 | MS.gene05017:intron | 35.0% | |
| TCATTCATAGGTTTAAGCAG+TGG | - | chr3.4:66331642-66331661 | MS.gene05017:intron | 35.0% | |
| TCGAGAACATGCAATTATGT+CGG | + | chr3.4:66331968-66331987 | None:intergenic | 35.0% | |
| TCTCTTTGCACTTCATAAAG+TGG | - | chr3.4:66331580-66331599 | MS.gene05017:CDS | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | + | chr3.4:66332594-66332613 | None:intergenic | 35.0% | |
| TGCAAACAAGTTGCTGAATA+TGG | - | chr3.4:66334380-66334399 | MS.gene05017:intron | 35.0% | |
| TGGATGCATTCACTTAAAAG+GGG | + | chr3.4:66332073-66332092 | None:intergenic | 35.0% | |
| TGGCAAAGCAAAGATACATT+TGG | - | chr3.4:66334448-66334467 | MS.gene05017:intron | 35.0% | |
| TTACATATTCCCAAACTCCA+GGG | + | chr3.4:66330825-66330844 | None:intergenic | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | - | chr3.4:66332593-66332612 | MS.gene05017:intron | 35.0% | |
| TTCCAATTCCTGATTGCATT+TGG | + | chr3.4:66332475-66332494 | None:intergenic | 35.0% | |
| TTGCCTTCTTCAATTGGAAA+TGG | - | chr3.4:66331116-66331135 | MS.gene05017:CDS | 35.0% | |
| TTTACATATTCCCAAACTCC+AGG | + | chr3.4:66330826-66330845 | None:intergenic | 35.0% | |
| ! | AAAACGCGTTTATAAGTTGG+AGG | - | chr3.4:66332672-66332691 | MS.gene05017:CDS | 35.0% |
| ! | AATGCACTTGAAGCAGATTT+TGG | - | chr3.4:66331062-66331081 | MS.gene05017:CDS | 35.0% |
| ! | ACACATGTACACCAATGTTT+TGG | - | chr3.4:66331289-66331308 | MS.gene05017:CDS | 35.0% |
| ! | ACATAACCGGTTTAGTTGAA+TGG | - | chr3.4:66333757-66333776 | MS.gene05017:intron | 35.0% |
| ! | CACTGATTACCTCAAATTCA+AGG | - | chr3.4:66330885-66330904 | MS.gene05017:CDS | 35.0% |
| ! | CCTATGATGATTTTGAACCA+AGG | - | chr3.4:66331553-66331572 | MS.gene05017:CDS | 35.0% |
| ! | CTTGAATTTGAGGTAATCAG+TGG | + | chr3.4:66330887-66330906 | None:intergenic | 35.0% |
| ! | CTTTTGTCTTTCTCAGTGTA+AGG | + | chr3.4:66333512-66333531 | None:intergenic | 35.0% |
| ! | GTTCCATTTGACTAGTTCTT+CGG | - | chr3.4:66332718-66332737 | MS.gene05017:CDS | 35.0% |
| !! | ATTACTGTTGATGGTGTTTC+TGG | - | chr3.4:66334107-66334126 | MS.gene05017:CDS | 35.0% |
| !!! | TATCTTTGCTTTGCCACTTT+TGG | + | chr3.4:66334444-66334463 | None:intergenic | 35.0% |
| !!! | TTAACATGTGCTTGGTTTTG+CGG | + | chr3.4:66332176-66332195 | None:intergenic | 35.0% |
| AAACAACTCTGCATAGTCCT+GGG | + | chr3.4:66333421-66333440 | None:intergenic | 40.0% | |
| AAGATTCTCAACCTCATGGA+AGG | - | chr3.4:66332765-66332784 | MS.gene05017:intron | 40.0% | |
| AATGAGGTTGCTTGAAAACC+AGG | - | chr3.4:66332989-66333008 | MS.gene05017:intron | 40.0% | |
| AGCAATTTCCTGATATGTGC+TGG | + | chr3.4:66333153-66333172 | None:intergenic | 40.0% | |
| AGCACATATCAGGAAATTGC+TGG | - | chr3.4:66333152-66333171 | MS.gene05017:CDS | 40.0% | |
| AGTACCTTGAGAAAGGTAGA+AGG | - | chr3.4:66330251-66330270 | MS.gene05017:intron | 40.0% | |
| ATAAAGGAATCCTGCGTCAA+TGG | - | chr3.4:66332547-66332566 | MS.gene05017:intron | 40.0% | |
| ATGAGGTTGCTTGAAAACCA+GGG | - | chr3.4:66332990-66333009 | MS.gene05017:intron | 40.0% | |
| ATTGGATCAAGTGAGAGCTT+TGG | - | chr3.4:66332255-66332274 | MS.gene05017:intron | 40.0% | |
| CATATCAGGAAATTGCTGGA+AGG | - | chr3.4:66333156-66333175 | MS.gene05017:CDS | 40.0% | |
| CATATGATACCTACTCTGCT+TGG | + | chr3.4:66330215-66330234 | None:intergenic | 40.0% | |
| CATATGTTGCCTTTGCAGTA+AGG | - | chr3.4:66330794-66330813 | MS.gene05017:CDS | 40.0% | |
| CATCATAACCAGCACATATC+AGG | - | chr3.4:66333142-66333161 | MS.gene05017:CDS | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | + | chr3.4:66334017-66334036 | None:intergenic | 40.0% | |
| CCATGGTTAGTAGCAAAAGT+TGG | + | chr3.4:66334074-66334093 | None:intergenic | 40.0% | |
| CCTGCAGTAGCAAAACAATA+GGG | + | chr3.4:66334818-66334837 | None:intergenic | 40.0% | |
| CGATTTATTGCCGACACAAA+GGG | - | chr3.4:66333978-66333997 | MS.gene05017:intron | 40.0% | |
| CTCTTATGGCTAGCAAACTT+AGG | - | chr3.4:66332838-66332857 | MS.gene05017:intron | 40.0% | |
| CTTACTGCAAAGGCAACATA+TGG | + | chr3.4:66330796-66330815 | None:intergenic | 40.0% | |
| GAACAAAAGGTTGAGAAGCT+TGG | - | chr3.4:66333788-66333807 | MS.gene05017:CDS | 40.0% | |
| GAACCGAAGAACTAGTCAAA+TGG | + | chr3.4:66332724-66332743 | None:intergenic | 40.0% | |
| GAGAAGAGATGGCAGAAATA+AGG | - | chr3.4:66333862-66333881 | MS.gene05017:CDS | 40.0% | |
| GAGGTTGAGAATCTTAGTTG+TGG | + | chr3.4:66332760-66332779 | None:intergenic | 40.0% | |
| GAGTGCTTGGTATCAATGAT+TGG | + | chr3.4:66332498-66332517 | None:intergenic | 40.0% | |
| GCCATACCATTCAACTAAAC+CGG | + | chr3.4:66333766-66333785 | None:intergenic | 40.0% | |
| GGCATGAGAAGTGATACTTA+GGG | + | chr3.4:66333082-66333101 | None:intergenic | 40.0% | |
| GGTTGTTGAGGTTCATCAAT+TGG | + | chr3.4:66334596-66334615 | None:intergenic | 40.0% | |
| GTCATTGAAGCAATGAACTG+TGG | - | chr3.4:66334044-66334063 | MS.gene05017:intron | 40.0% | |
| GTTGACAATGATAGGTCACA+AGG | - | chr3.4:66332427-66332446 | MS.gene05017:CDS | 40.0% | |
| TAAAGGAATCCTGCGTCAAT+GGG | - | chr3.4:66332548-66332567 | MS.gene05017:intron | 40.0% | |
| TCAAGGAACCAAATGCAATC+AGG | - | chr3.4:66332464-66332483 | MS.gene05017:CDS | 40.0% | |
| TCACTTCTCATGCCAATTCA+TGG | - | chr3.4:66333088-66333107 | MS.gene05017:intron | 40.0% | |
| TCAGAAAACAAGGAACAAGC+AGG | - | chr3.4:66334642-66334661 | MS.gene05017:CDS | 40.0% | |
| TCGATTTATTGCCGACACAA+AGG | - | chr3.4:66333977-66333996 | MS.gene05017:intron | 40.0% | |
| TGATCCTTCTACCTTTCTCA+AGG | + | chr3.4:66330258-66330277 | None:intergenic | 40.0% | |
| TGGCATGAGAAGTGATACTT+AGG | + | chr3.4:66333083-66333102 | None:intergenic | 40.0% | |
| TTATCAGTGTGTGTCATGTC+CGG | + | chr3.4:66333246-66333265 | None:intergenic | 40.0% | |
| TTCTCCATGTTCATTGGATC+TGG | + | chr3.4:66331746-66331765 | None:intergenic | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | - | chr3.4:66333807-66333826 | MS.gene05017:CDS | 40.0% | |
| TTTGCCAAGTACCTTGAGAA+AGG | - | chr3.4:66330244-66330263 | MS.gene05017:intron | 40.0% | |
| TTTGGTCAAGCAGATGTTCT+TGG | - | chr3.4:66331824-66331843 | MS.gene05017:intron | 40.0% | |
| ! | ACCGGTTTAGTTGAATGGTA+TGG | - | chr3.4:66333762-66333781 | MS.gene05017:intron | 40.0% |
| ! | ACTTTTGCTACTAACCATGG+TGG | - | chr3.4:66334074-66334093 | MS.gene05017:intron | 40.0% |
| ! | CAATTGTATCGGCCATGAAT+TGG | + | chr3.4:66333103-66333122 | None:intergenic | 40.0% |
| ! | CCAACTTTTGCTACTAACCA+TGG | - | chr3.4:66334071-66334090 | MS.gene05017:intron | 40.0% |
| ! | CCTGCTTTGTATGAAGCATT+TGG | - | chr3.4:66334014-66334033 | MS.gene05017:intron | 40.0% |
| ! | GACTATGCAGAGTTGTTTCA+GGG | - | chr3.4:66333423-66333442 | MS.gene05017:intron | 40.0% |
| ! | GTAAAGTGGATTCGACACAT+TGG | - | chr3.4:66334195-66334214 | MS.gene05017:CDS | 40.0% |
| ! | GTGCCTTTTCAGACAGATAA+AGG | - | chr3.4:66332531-66332550 | MS.gene05017:CDS | 40.0% |
| ! | TCTACCTTTCTCAAGGTACT+TGG | + | chr3.4:66330251-66330270 | None:intergenic | 40.0% |
| !! | TATCATCAGTGTCGACATGA+CGG | + | chr3.4:66333281-66333300 | None:intergenic | 40.0% |
| !!! | GCGTAAAATTTTCGAGTGCT+TGG | + | chr3.4:66332511-66332530 | None:intergenic | 40.0% |
| AAGCATGTGCTATAGTTCCC+TGG | + | chr3.4:66333010-66333029 | None:intergenic | 45.0% | |
| AAGCTTTGCAACTGAGCTCA+GGG | + | chr3.4:66331478-66331497 | None:intergenic | 45.0% | |
| AAGTTCAACATAGCTGCACC+TGG | - | chr3.4:66333464-66333483 | MS.gene05017:CDS | 45.0% | |
| ACTGATAGACGGGCATGTTA+GGG | + | chr3.4:66330457-66330476 | None:intergenic | 45.0% | |
| ACTGCAAAGGCAACATATGG+TGG | + | chr3.4:66330793-66330812 | None:intergenic | 45.0% | |
| AGAAGCCTCCAACTATGACA+AGG | + | chr3.4:66333818-66333837 | None:intergenic | 45.0% | |
| AGATACTGCAGGAAGAGTGA+AGG | - | chr3.4:66331685-66331704 | MS.gene05017:intron | 45.0% | |
| AGCTCCAGATCCAATGAACA+TGG | - | chr3.4:66331739-66331758 | MS.gene05017:intron | 45.0% | |
| ATTCCTTTCAGCACTTCCAG+TGG | - | chr3.4:66331524-66331543 | MS.gene05017:CDS | 45.0% | |
| CACAAAAGCTCCCTTTGTGT+CGG | + | chr3.4:66333991-66334010 | None:intergenic | 45.0% | |
| CAGCAGAGTCTCAGAAAACA+AGG | - | chr3.4:66334632-66334651 | MS.gene05017:CDS | 45.0% | |
| CATGCAACATTTACACTCCC+AGG | - | chr3.4:66333401-66333420 | MS.gene05017:intron | 45.0% | |
| CCAGAGAGACTTCTGAGTTA+TGG | - | chr3.4:66331327-66331346 | MS.gene05017:intron | 45.0% | |
| CCAGCGGAAATTACTGTTGA+TGG | - | chr3.4:66334098-66334117 | MS.gene05017:CDS | 45.0% | |
| CCATAACTCAGAAGTCTCTC+TGG | + | chr3.4:66331330-66331349 | None:intergenic | 45.0% | |
| CCATCAACAGTAATTTCCGC+TGG | + | chr3.4:66334101-66334120 | None:intergenic | 45.0% | |
| CGCCATATCTCATCAAATGC+AGG | + | chr3.4:66332650-66332669 | None:intergenic | 45.0% | |
| CTCAGTTGCAAAGCTTCAGA+TGG | - | chr3.4:66331482-66331501 | MS.gene05017:CDS | 45.0% | |
| CTCTCCATTGCGATGTCTAT+CGG | + | chr3.4:66333952-66333971 | None:intergenic | 45.0% | |
| GAAACAACTCTGCATAGTCC+TGG | + | chr3.4:66333422-66333441 | None:intergenic | 45.0% | |
| GCATGGCTTTCATATTGTCC+AGG | + | chr3.4:66333386-66333405 | None:intergenic | 45.0% | |
| GCCTGCAGTAGCAAAACAAT+AGG | + | chr3.4:66334819-66334838 | None:intergenic | 45.0% | |
| GCTTGCAGCAAAGATAAACC+TGG | - | chr3.4:66333365-66333384 | MS.gene05017:intron | 45.0% | |
| GGTGCAGCTATGTTGAACTT+AGG | + | chr3.4:66333464-66333483 | None:intergenic | 45.0% | |
| GTGAACCTTGTCATAGTTGG+AGG | - | chr3.4:66333810-66333829 | MS.gene05017:CDS | 45.0% | |
| TACTGATAGACGGGCATGTT+AGG | + | chr3.4:66330458-66330477 | None:intergenic | 45.0% | |
| TAGAAATGTTACCTGTCCGC+CGG | + | chr3.4:66331861-66331880 | None:intergenic | 45.0% | |
| ! | CATTTGGTTCCTTGAGCATC+AGG | + | chr3.4:66332459-66332478 | None:intergenic | 45.0% |
| ! | CTGGGAGTGTAAATGTTGCA+TGG | + | chr3.4:66333403-66333422 | None:intergenic | 45.0% |
| ! | CTTGATTCGTCTCCATTGAG+AGG | + | chr3.4:66334146-66334165 | None:intergenic | 45.0% |
| ! | GGACTATGCAGAGTTGTTTC+AGG | - | chr3.4:66333422-66333441 | MS.gene05017:intron | 45.0% |
| ! | TGTTCATTGGATCTGGAGCT+TGG | + | chr3.4:66331739-66331758 | None:intergenic | 45.0% |
| !! | CCCTATTGTTTTGCTACTGC+AGG | - | chr3.4:66334815-66334834 | MS.gene05017:CDS | 45.0% |
| !! | TATCCACTGGAAGTGCTGAA+AGG | + | chr3.4:66331530-66331549 | None:intergenic | 45.0% |
| !! | TCATCATAGGGAGTATCCAC+TGG | + | chr3.4:66331543-66331562 | None:intergenic | 45.0% |
| !!! | AAGCAGTGGGGTTTTGAAAG+TGG | - | chr3.4:66331656-66331675 | MS.gene05017:intron | 45.0% |
| !!! | AGTGGGGTTTTGAAAGTGGA+TGG | - | chr3.4:66331660-66331679 | MS.gene05017:intron | 45.0% |
| !!! | GATCTGGTTTTCCTTCCATG+AGG | + | chr3.4:66332779-66332798 | None:intergenic | 45.0% |
| !!! | GTGGGGTTTTGAAAGTGGAT+GGG | - | chr3.4:66331661-66331680 | MS.gene05017:intron | 45.0% |
| !!! | TGGGGTTTTGAAAGTGGATG+GGG | - | chr3.4:66331662-66331681 | MS.gene05017:intron | 45.0% |
| !!! | TTTTCTGAGACTCTGCTGCT+TGG | + | chr3.4:66334630-66334649 | None:intergenic | 45.0% |
| AGAAGAACTGACACAGCCAC+CGG | - | chr3.4:66333224-66333243 | MS.gene05017:CDS | 50.0% | |
| AGGCTCATACCTGATGCTCA+AGG | - | chr3.4:66332447-66332466 | MS.gene05017:CDS | 50.0% | |
| CAGACCGATAGACATCGCAA+TGG | - | chr3.4:66333945-66333964 | MS.gene05017:intron | 50.0% | |
| CAGATGCATCCAAGCAGAGT+AGG | - | chr3.4:66330203-66330222 | MS.gene05017:intron | 50.0% | |
| CGTTCAAGGTCCAGATCACA+GGG | - | chr3.4:66334838-66334857 | MS.gene05017:CDS | 50.0% | |
| CTACTCTGCTTGGATGCATC+TGG | + | chr3.4:66330205-66330224 | None:intergenic | 50.0% | |
| GAAGCTTTGCAACTGAGCTC+AGG | + | chr3.4:66331479-66331498 | None:intergenic | 50.0% | |
| GCTTCAGATGGCACTAACAG+TGG | - | chr3.4:66331494-66331513 | MS.gene05017:CDS | 50.0% | |
| TAATTTCCGCTGGACCACCA+TGG | + | chr3.4:66334091-66334110 | None:intergenic | 50.0% | |
| TACTAACCATGGTGGTCCAG+CGG | - | chr3.4:66334082-66334101 | MS.gene05017:CDS | 50.0% | |
| TAGACAGTTTGGTCAGCACC+AGG | + | chr3.4:66333485-66333504 | None:intergenic | 50.0% | |
| TATTCCCAAACTCCAGGGTC+TGG | + | chr3.4:66330820-66330839 | None:intergenic | 50.0% | |
| TGGAACATGATTTCAGCGGC+AGG | - | chr3.4:66334215-66334234 | MS.gene05017:intron | 50.0% | |
| TTTGCTACTGCAGGCGTTCA+AGG | - | chr3.4:66334824-66334843 | MS.gene05017:CDS | 50.0% | |
| ! | AGACTCTGCTGCTTGGAGTT+GGG | + | chr3.4:66334623-66334642 | None:intergenic | 50.0% |
| !! | GTTCTTGGCTTGCCAGATAC+CGG | - | chr3.4:66331839-66331858 | MS.gene05017:CDS | 50.0% |
| AAGGCCAGACCCTGGAGTTT+GGG | - | chr3.4:66330813-66330832 | MS.gene05017:CDS | 55.0% | |
| AGCGAGAAACCCATTGACGC+AGG | + | chr3.4:66332560-66332579 | None:intergenic | 55.0% | |
| AGTGGATGGGGAGATACTGC+AGG | - | chr3.4:66331674-66331693 | MS.gene05017:intron | 55.0% | |
| GCGTTCAAGGTCCAGATCAC+AGG | - | chr3.4:66334837-66334856 | MS.gene05017:CDS | 55.0% | |
| TAAGGCCAGACCCTGGAGTT+TGG | - | chr3.4:66330812-66330831 | MS.gene05017:CDS | 55.0% | |
| TCAGTGTGTGTCATGTCCGG+TGG | + | chr3.4:66333243-66333262 | None:intergenic | 55.0% | |
| TTTGCAGTAAGGCCAGACCC+TGG | - | chr3.4:66330805-66330824 | MS.gene05017:CDS | 55.0% | |
| ! | GAGACTCTGCTGCTTGGAGT+TGG | + | chr3.4:66334624-66334643 | None:intergenic | 55.0% |
| !! | AGGGTCTGGCCTTACTGCAA+AGG | + | chr3.4:66330806-66330825 | None:intergenic | 55.0% |
| !! | GAGTTGGGCACTGGTTGTTG+AGG | + | chr3.4:66334608-66334627 | None:intergenic | 55.0% |
| GTTACCTGTCCGCCGGTATC+TGG | + | chr3.4:66331854-66331873 | None:intergenic | 60.0% | |
| ! | TGCTGCTTGGAGTTGGGCAC+TGG | + | chr3.4:66334617-66334636 | None:intergenic | 60.0% |
| !! | CTTGGCTTGCCAGATACCGG+CGG | - | chr3.4:66331842-66331861 | MS.gene05017:CDS | 60.0% |
| CTTGCCAGATACCGGCGGAC+AGG | - | chr3.4:66331847-66331866 | MS.gene05017:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 66330142 | 66334864 | 66330142 | ID=MS.gene05017 |
| chr3.4 | mRNA | 66330142 | 66334864 | 66330142 | ID=MS.gene05017.t1;Parent=MS.gene05017 |
| chr3.4 | exon | 66334622 | 66334864 | 66334622 | ID=MS.gene05017.t1.exon1;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66334622 | 66334864 | 66334622 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66334077 | 66334231 | 66334077 | ID=MS.gene05017.t1.exon2;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66334077 | 66334231 | 66334077 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66333765 | 66333957 | 66333765 | ID=MS.gene05017.t1.exon3;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66333765 | 66333957 | 66333765 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66333432 | 66333550 | 66333432 | ID=MS.gene05017.t1.exon4;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66333432 | 66333550 | 66333432 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66333138 | 66333354 | 66333138 | ID=MS.gene05017.t1.exon5;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66333138 | 66333354 | 66333138 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66332667 | 66332762 | 66332667 | ID=MS.gene05017.t1.exon6;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66332667 | 66332762 | 66332667 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66332392 | 66332565 | 66332392 | ID=MS.gene05017.t1.exon7;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66332392 | 66332565 | 66332392 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66332137 | 66332253 | 66332137 | ID=MS.gene05017.t1.exon8;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66332137 | 66332253 | 66332137 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66331829 | 66331995 | 66331829 | ID=MS.gene05017.t1.exon9;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66331829 | 66331995 | 66331829 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66331409 | 66331633 | 66331409 | ID=MS.gene05017.t1.exon10;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66331409 | 66331633 | 66331409 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66330748 | 66331314 | 66330748 | ID=MS.gene05017.t1.exon11;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66330748 | 66331314 | 66330748 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66330506 | 66330644 | 66330506 | ID=MS.gene05017.t1.exon12;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66330506 | 66330644 | 66330506 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66330343 | 66330431 | 66330343 | ID=MS.gene05017.t1.exon13;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66330343 | 66330431 | 66330343 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| chr3.4 | exon | 66330142 | 66330169 | 66330142 | ID=MS.gene05017.t1.exon14;Parent=MS.gene05017.t1 |
| chr3.4 | CDS | 66330142 | 66330169 | 66330142 | ID=cds.MS.gene05017.t1;Parent=MS.gene05017.t1 |
| Gene Sequence |
| Protein sequence |
