Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07149.t1 | RHN50394.1 | 76.1 | 163 | 39 | 0 | 1 | 163 | 97 | 259 | 3.70E-60 | 241.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07149.t1 | A0A072U6L9 | 76.1 | 163 | 39 | 0 | 1 | 163 | 1 | 163 | 2.6e-60 | 241.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene07149 | 0.804222 | 2.40E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene07149 | 0.806297 | 8.81E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene07149 | 0.822886 | 1.86E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene07149 | 0.815759 | 7.84E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene07149 | 0.821126 | 4.77E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene07149 | 0.801594 | 8.37E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene07149 | 0.803628 | 3.18E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene07149 | 0.814708 | 1.34E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene07149 | 0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene07149 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene07149 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene07149 | 0.820086 | 8.26E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene07149 | 0.829052 | 6.38E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07149.t1 | MTR_6g017130 | 80.795 | 151 | 29 | 0 | 1 | 151 | 1 | 151 | 3.80e-77 | 237 |
| MS.gene07149.t1 | MTR_6g017130 | 81.967 | 122 | 22 | 0 | 26 | 147 | 90 | 211 | 9.20e-62 | 197 |
| MS.gene07149.t1 | MTR_6g017120 | 86.441 | 59 | 8 | 0 | 64 | 122 | 95 | 153 | 2.59e-27 | 102 |
| MS.gene07149.t1 | MTR_1g089085 | 45.205 | 73 | 24 | 1 | 162 | 218 | 29 | 101 | 6.52e-14 | 67.4 |
| MS.gene07149.t1 | MTR_1g089620 | 82.353 | 34 | 6 | 0 | 170 | 203 | 1 | 34 | 6.63e-12 | 63.9 |
| MS.gene07149.t1 | MTR_0299s0030 | 84.848 | 33 | 5 | 0 | 1 | 33 | 86 | 118 | 2.32e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTCCAATCTTACAATTT+TGG | 0.047024 | 1.4:-71095524 | None:intergenic |
| GCCATTCTTCTAATCATTCT+AGG | 0.250318 | 1.4:+71100193 | MS.gene07149:CDS |
| AAGGAAGATAATCCGAAAAT+TGG | 0.254203 | 1.4:+71095552 | MS.gene07149:CDS |
| CATTTCCAAAACACTAGATT+TGG | 0.280825 | 1.4:+71098631 | MS.gene07149:CDS |
| TCGGGAGTTGAATGCGATTC+AGG | 0.293806 | 1.4:+71095887 | MS.gene07149:CDS |
| CCGAAAATTAGATGCAATAT+TGG | 0.314170 | 1.4:+71095756 | MS.gene07149:CDS |
| AAAGTTGGAAAGACATCAAT+TGG | 0.370420 | 1.4:+71095832 | MS.gene07149:CDS |
| ATCGTCCAAATCTAGTGTTT+TGG | 0.375684 | 1.4:-71098636 | None:intergenic |
| CAGAGAACTGTGAACTTCCT+TGG | 0.395610 | 1.4:+71098594 | MS.gene07149:CDS |
| AAAGTTGGGATGACATCAAT+TGG | 0.397689 | 1.4:+71095640 | MS.gene07149:CDS |
| TCAACCGTTCACATTAGAAA+TGG | 0.399786 | 1.4:+71100161 | MS.gene07149:CDS |
| GTTGTGATCTAAAGGGAAAA+AGG | 0.420866 | 1.4:+71098559 | MS.gene07149:intron |
| GCGCTCAAGTCCCTCTTAGA+TGG | 0.422869 | 1.4:+71095807 | MS.gene07149:CDS |
| ACATCAATTGGAAAGACATC+AGG | 0.427079 | 1.4:+71095652 | MS.gene07149:CDS |
| ACATCAATTGGAAAGACATA+AGG | 0.428491 | 1.4:+71095844 | MS.gene07149:CDS |
| CCGAAAATTGGATACAATAG+TGG | 0.432070 | 1.4:+71095564 | MS.gene07149:CDS |
| TAGATTTGGACGATCTCTTT+CGG | 0.435718 | 1.4:+71098645 | MS.gene07149:CDS |
| GTGACCCAAAATTGTAAGAT+TGG | 0.439121 | 1.4:+71095519 | MS.gene07149:CDS |
| CCCTCTTAGATGGCAAAAGT+TGG | 0.455555 | 1.4:+71095817 | MS.gene07149:CDS |
| AGAGAACTGTGAACTTCCTT+GGG | 0.473513 | 1.4:+71098595 | MS.gene07149:CDS |
| ACCTAGAATGATTAGAAGAA+TGG | 0.477917 | 1.4:-71100194 | None:intergenic |
| GTCGGGATTTGAAAGCAATA+CGG | 0.480987 | 1.4:+71095694 | MS.gene07149:CDS |
| TGGGTCACCGCACTGTTGGT+TGG | 0.509494 | 1.4:-71095504 | None:intergenic |
| CATCAATTGGAAAGACATAA+GGG | 0.511174 | 1.4:+71095845 | MS.gene07149:CDS |
| GAGTCAGATGGCAAAAGAAA+AGG | 0.513017 | 1.4:+71095960 | MS.gene07149:CDS |
| ATGCGATTCAGGACAAGGCC+AGG | 0.522988 | 1.4:+71095898 | MS.gene07149:CDS |
| CTTTCCATTTCTAATGTGAA+CGG | 0.546121 | 1.4:-71100165 | None:intergenic |
| TCGGGATTTGAAAGCAATAC+GGG | 0.547631 | 1.4:+71095695 | MS.gene07149:CDS |
| GTTGAATGCGATTCAGGACA+AGG | 0.552499 | 1.4:+71095893 | MS.gene07149:CDS |
| TTTGAAAGCAATACGGGACA+AGG | 0.572304 | 1.4:+71095701 | MS.gene07149:CDS |
| AAGCAATACGGGACAAGGCA+AGG | 0.574791 | 1.4:+71095706 | MS.gene07149:CDS |
| AAAGAGTTCATCGAGTCAGA+TGG | 0.590519 | 1.4:+71095948 | MS.gene07149:CDS |
| ATGATATCAAGCACATCCCA+AGG | 0.608076 | 1.4:-71098611 | None:intergenic |
| GATACAATAGTGGTAAGCGT+TGG | 0.621054 | 1.4:+71095574 | MS.gene07149:CDS |
| TATTGGTAAGCCATGGTCAG+AGG | 0.622917 | 1.4:+71095773 | MS.gene07149:CDS |
| GATGCAATATTGGTAAGCCA+TGG | 0.625611 | 1.4:+71095766 | MS.gene07149:CDS |
| CATCAATTGGAAAGACATCA+GGG | 0.635002 | 1.4:+71095653 | MS.gene07149:CDS |
| TAAGATTGGAGAGCTTCCCA+AGG | 0.652916 | 1.4:+71095533 | MS.gene07149:CDS |
| TAGTGATCCAACCAACAGTG+CGG | 0.744899 | 1.4:+71095497 | MS.gene07149:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTATTTATTTATTTT+AGG | - | chr1.4:71098501-71098520 | None:intergenic | 0.0% |
| !! | TTGTTTATTTAATAATATCA+TGG | - | chr1.4:71098462-71098481 | None:intergenic | 10.0% |
| !!! | AAAATTGCTTTTTTTTTTTA+GGG | - | chr1.4:71099850-71099869 | None:intergenic | 10.0% |
| !!! | TTTTCTGATATTTATTTTAT+CGG | - | chr1.4:71100082-71100101 | None:intergenic | 10.0% |
| !! | AAACCAAAATTGTTAATTAA+AGG | - | chr1.4:71096923-71096942 | None:intergenic | 15.0% |
| !! | AAATTGTTATCAAACAATAA+AGG | + | chr1.4:71096850-71096869 | MS.gene07149:intron | 15.0% |
| !! | AGAATCTCTTATATATTTAT+GGG | + | chr1.4:71096752-71096771 | MS.gene07149:intron | 15.0% |
| !! | AGGATTATAATATATAAGAT+AGG | + | chr1.4:71097816-71097835 | MS.gene07149:intron | 15.0% |
| !! | GAATCTTTAATTAACAATTA+AGG | + | chr1.4:71096678-71096697 | MS.gene07149:intron | 15.0% |
| !! | TATAATATATAAGATAGGAT+AGG | + | chr1.4:71097821-71097840 | MS.gene07149:intron | 15.0% |
| !! | TATCGGTAAAAATAAAAATA+AGG | - | chr1.4:71100065-71100084 | None:intergenic | 15.0% |
| !! | TTAATAATATCATGGAATAT+GGG | - | chr1.4:71098454-71098473 | None:intergenic | 15.0% |
| !! | TTTAATAATATCATGGAATA+TGG | - | chr1.4:71098455-71098474 | None:intergenic | 15.0% |
| !!! | AAAAATTATATGCATTGATA+TGG | - | chr1.4:71097661-71097680 | None:intergenic | 15.0% |
| !!! | AAATTGCTTTTTTTTTTTAG+GGG | - | chr1.4:71099849-71099868 | None:intergenic | 15.0% |
| !!! | AACCTTTAAAAAAAAACTTA+CGG | + | chr1.4:71096809-71096828 | MS.gene07149:intron | 15.0% |
| !!! | CAAAATTGCTTTTTTTTTTT+AGG | - | chr1.4:71099851-71099870 | None:intergenic | 15.0% |
| !!! | GGTTTGTTAAAAAAAAAAAA+AGG | + | chr1.4:71098117-71098136 | MS.gene07149:intron | 15.0% |
| !!! | TGTTACAAGTTTTATATTTT+TGG | + | chr1.4:71096418-71096437 | MS.gene07149:intron | 15.0% |
| !!! | TTTTGCCATTTTTTTTAAAA+GGG | + | chr1.4:71099990-71100009 | MS.gene07149:intron | 15.0% |
| !!! | TTTTGCTGTTTTTTATTTTT+AGG | + | chr1.4:71099774-71099793 | MS.gene07149:intron | 15.0% |
| !! | AAAAAAAAAAAAAGGCTTAG+AGG | + | chr1.4:71098125-71098144 | MS.gene07149:intron | 20.0% |
| !! | AAAAGTAAACAAACTACTAA+TGG | - | chr1.4:71099758-71099777 | None:intergenic | 20.0% |
| !! | AATGCGTATAAATTATAAAG+TGG | + | chr1.4:71097692-71097711 | MS.gene07149:intron | 20.0% |
| !! | ATAATATACCAATTGAAGAT+GGG | + | chr1.4:71098398-71098417 | MS.gene07149:intron | 20.0% |
| !! | GAGAATCTCTTATATATTTA+TGG | + | chr1.4:71096751-71096770 | MS.gene07149:intron | 20.0% |
| !! | TAAAAAATTGTATTGGAGAA+GGG | + | chr1.4:71097127-71097146 | MS.gene07149:intron | 20.0% |
| !! | TAATAATATCATGGAATATG+GGG | - | chr1.4:71098453-71098472 | None:intergenic | 20.0% |
| !! | TATAATATACCAATTGAAGA+TGG | + | chr1.4:71098397-71098416 | MS.gene07149:intron | 20.0% |
| !!! | AAATGGTTATATGTTTTAGA+TGG | + | chr1.4:71098014-71098033 | MS.gene07149:intron | 20.0% |
| !!! | AACCGTAAGTTTTTTTTTAA+AGG | - | chr1.4:71096814-71096833 | None:intergenic | 20.0% |
| !!! | AAGTTTTATATTTATCACTG+TGG | + | chr1.4:71096153-71096172 | MS.gene07149:intron | 20.0% |
| !!! | AATTGCTTTTTTTTTTTAGG+GGG | - | chr1.4:71099848-71099867 | None:intergenic | 20.0% |
| !!! | ATACAAGTTTTACATTTTTC+AGG | + | chr1.4:71096287-71096306 | MS.gene07149:intron | 20.0% |
| !!! | ATTGTTTGATAACAATTTGA+AGG | - | chr1.4:71096848-71096867 | None:intergenic | 20.0% |
| !!! | CTTTTGCCATTTTTTTTAAA+AGG | + | chr1.4:71099989-71100008 | MS.gene07149:intron | 20.0% |
| !!! | TTTGCCATTTTTTTTAAAAG+GGG | + | chr1.4:71099991-71100010 | MS.gene07149:intron | 20.0% |
| !!! | TTTTTCAGTAGTGAAAATTA+GGG | + | chr1.4:71098311-71098330 | MS.gene07149:intron | 20.0% |
| !!! | TTTTTTCAGTAGTGAAAATT+AGG | + | chr1.4:71098310-71098329 | MS.gene07149:intron | 20.0% |
| ! | ACCTTCTTTATTCTTGTAAA+CGG | - | chr1.4:71098911-71098930 | None:intergenic | 25.0% |
| ! | ACCTTTCATTATCTAAAAGT+AGG | + | chr1.4:71096014-71096033 | MS.gene07149:intron | 25.0% |
| ! | AGGGTTAATTAATGCAATTA+GGG | + | chr1.4:71098330-71098349 | MS.gene07149:intron | 25.0% |
| ! | AGTTATGATCAATTACCTTA+AGG | + | chr1.4:71096958-71096977 | MS.gene07149:intron | 25.0% |
| ! | ATCTCTTATATATTTATGGG+AGG | + | chr1.4:71096755-71096774 | MS.gene07149:intron | 25.0% |
| ! | ATGAAGAAAAATTGTTTGGT+CGG | + | chr1.4:71095676-71095695 | MS.gene07149:CDS | 25.0% |
| ! | ATGAGATAATTGCATGATTA+AGG | + | chr1.4:71097727-71097746 | MS.gene07149:intron | 25.0% |
| ! | CCAAAATTGTTAATTAAAGG+TGG | - | chr1.4:71096920-71096939 | None:intergenic | 25.0% |
| ! | CTAAAAAATTGTATTGGAGA+AGG | + | chr1.4:71097126-71097145 | MS.gene07149:intron | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | + | chr1.4:71097120-71097139 | MS.gene07149:intron | 25.0% |
| ! | GGTAATTGATCATAACTATT+AGG | - | chr1.4:71096955-71096974 | None:intergenic | 25.0% |
| ! | TAGGGTTAATTAATGCAATT+AGG | + | chr1.4:71098329-71098348 | MS.gene07149:intron | 25.0% |
| ! | TAGTATCATGTATCAAACAA+TGG | - | chr1.4:71096116-71096135 | None:intergenic | 25.0% |
| ! | TCAAGTTTCGTATAATCATA+AGG | + | chr1.4:71098742-71098761 | MS.gene07149:intron | 25.0% |
| ! | TTAAGGTTATCAAACAATTG+AGG | + | chr1.4:71096695-71096714 | MS.gene07149:intron | 25.0% |
| ! | TTAGACATCATAAACATTAG+TGG | + | chr1.4:71098214-71098233 | MS.gene07149:intron | 25.0% |
| ! | TTATCAAACAATTCATGTCA+CGG | - | chr1.4:71096881-71096900 | None:intergenic | 25.0% |
| ! | TTCAGTTCATTCATTTCATT+GGG | + | chr1.4:71097522-71097541 | MS.gene07149:intron | 25.0% |
| ! | TTCTATTGTTGTGATCTAAA+GGG | + | chr1.4:71098552-71098571 | MS.gene07149:intron | 25.0% |
| ! | TTGTTATCAAACAATAAAGG+TGG | + | chr1.4:71096853-71096872 | MS.gene07149:intron | 25.0% |
| ! | TTTACAAAAAGTTGCGATTA+TGG | - | chr1.4:71099927-71099946 | None:intergenic | 25.0% |
| ! | TTTCAGTTCATTCATTTCAT+TGG | + | chr1.4:71097521-71097540 | MS.gene07149:intron | 25.0% |
| !! | CAACTTTTTGTAAAGATAAG+GGG | + | chr1.4:71099933-71099952 | MS.gene07149:intron | 25.0% |
| !! | CCAATATTGCATCTAATTTT+CGG | - | chr1.4:71095759-71095778 | None:intergenic | 25.0% |
| !! | CCACCTTTAATTAACAATTT+TGG | + | chr1.4:71096917-71096936 | MS.gene07149:intron | 25.0% |
| !! | GCAACTTTTTGTAAAGATAA+GGG | + | chr1.4:71099932-71099951 | MS.gene07149:intron | 25.0% |
| !! | GGGAAAGAATTATGATTTTA+AGG | + | chr1.4:71097771-71097790 | MS.gene07149:intron | 25.0% |
| !! | TACATGATACTAGTGAATTT+TGG | + | chr1.4:71096124-71096143 | MS.gene07149:intron | 25.0% |
| !! | TCTTCAAGCAATAAATCTTT+TGG | - | chr1.4:71098796-71098815 | None:intergenic | 25.0% |
| !! | TCTTCATTTTCTTTTCTGTT+AGG | - | chr1.4:71097370-71097389 | None:intergenic | 25.0% |
| !! | TTTTAGACATCTACAATATG+AGG | + | chr1.4:71099570-71099589 | MS.gene07149:intron | 25.0% |
| !! | TTTTTATTGGAGAAATTTGC+TGG | + | chr1.4:71098697-71098716 | MS.gene07149:intron | 25.0% |
| !!! | AAGCAATAAATCTTTTGGTT+GGG | - | chr1.4:71098791-71098810 | None:intergenic | 25.0% |
| !!! | ATGTTTGTTGAATTTTGAGT+AGG | + | chr1.4:71096179-71096198 | MS.gene07149:intron | 25.0% |
| !!! | CTTTTAAAAAGTTGCGATTT+TGG | + | chr1.4:71099822-71099841 | MS.gene07149:intron | 25.0% |
| !!! | TCGCAACTTTTTAAAAGTTA+AGG | - | chr1.4:71099819-71099838 | None:intergenic | 25.0% |
| !!! | TGATTTTAAGGAAGCAATAT+CGG | + | chr1.4:71097783-71097802 | MS.gene07149:intron | 25.0% |
| !!! | TTACATTTTTCAGGATATGT+CGG | + | chr1.4:71096296-71096315 | MS.gene07149:intron | 25.0% |
| !!! | TTCCTTTTTAAAAAACTTCC+TGG | - | chr1.4:71095919-71095938 | None:intergenic | 25.0% |
| AAAGTTGGAAAGACATCAAT+TGG | + | chr1.4:71095832-71095851 | MS.gene07149:CDS | 30.0% | |
| AAATATCAGAAAATGCACTG+TGG | + | chr1.4:71100089-71100108 | MS.gene07149:intron | 30.0% | |
| AACCATGAATTATGTCAAAC+TGG | + | chr1.4:71099330-71099349 | MS.gene07149:intron | 30.0% | |
| AAGATAGAAAGATGAGAAAG+AGG | + | chr1.4:71097386-71097405 | MS.gene07149:intron | 30.0% | |
| AAGGAAGATAATCCGAAAAT+TGG | + | chr1.4:71095552-71095571 | MS.gene07149:CDS | 30.0% | |
| AATACTCAATTGTTGAGTCA+CGG | - | chr1.4:71096725-71096744 | None:intergenic | 30.0% | |
| AATATATGTTGTCACTGACA+AGG | + | chr1.4:71099144-71099163 | MS.gene07149:intron | 30.0% | |
| AATTGGAAGTGGAATATTCA+TGG | + | chr1.4:71097620-71097639 | MS.gene07149:intron | 30.0% | |
| ACATCAATTGGAAAGACATA+AGG | + | chr1.4:71095844-71095863 | MS.gene07149:CDS | 30.0% | |
| ACCTAGAATGATTAGAAGAA+TGG | - | chr1.4:71100197-71100216 | None:intergenic | 30.0% | |
| AGGGATGAAGAAAAATTGTT+TGG | + | chr1.4:71095672-71095691 | MS.gene07149:CDS | 30.0% | |
| ATCAATCTCAAAATTGTGGT+TGG | + | chr1.4:71099059-71099078 | MS.gene07149:intron | 30.0% | |
| ATGAAGAAAAACTGTTTGGT+CGG | + | chr1.4:71095868-71095887 | MS.gene07149:CDS | 30.0% | |
| ATTGGAAGTGGAATATTCAT+GGG | + | chr1.4:71097621-71097640 | MS.gene07149:intron | 30.0% | |
| CATAACAAATTGAAAACCAC+AGG | - | chr1.4:71096340-71096359 | None:intergenic | 30.0% | |
| CATCAATTGGAAAGACATAA+GGG | + | chr1.4:71095845-71095864 | MS.gene07149:CDS | 30.0% | |
| CATTTCCAAAACACTAGATT+TGG | + | chr1.4:71098631-71098650 | MS.gene07149:CDS | 30.0% | |
| CCGAAAATTAGATGCAATAT+TGG | + | chr1.4:71095756-71095775 | MS.gene07149:CDS | 30.0% | |
| CGTCTTAAATGCAAAAAGTT+GGG | + | chr1.4:71095626-71095645 | MS.gene07149:CDS | 30.0% | |
| CTGCATATTAAGTAGCTTAA+TGG | + | chr1.4:71098096-71098115 | MS.gene07149:intron | 30.0% | |
| CTTTCCATTTCTAATGTGAA+CGG | - | chr1.4:71100168-71100187 | None:intergenic | 30.0% | |
| GAGTAGTTGTTAAACACAAT+TGG | + | chr1.4:71097603-71097622 | MS.gene07149:intron | 30.0% | |
| GATTTATTGCTTGAAGATGA+TGG | + | chr1.4:71098799-71098818 | MS.gene07149:intron | 30.0% | |
| GCTTTCATTGGATATTTACA+TGG | + | chr1.4:71098180-71098199 | MS.gene07149:intron | 30.0% | |
| GTCTATCAATCTCAAAATTG+TGG | + | chr1.4:71099055-71099074 | MS.gene07149:intron | 30.0% | |
| GTTCTATTGTTGTGATCTAA+AGG | + | chr1.4:71098551-71098570 | MS.gene07149:intron | 30.0% | |
| TACGAAACTTGAAGAAGTAA+CGG | - | chr1.4:71098734-71098753 | None:intergenic | 30.0% | |
| TAGAAGAGATAGAGGAAAAT+GGG | + | chr1.4:71097042-71097061 | MS.gene07149:intron | 30.0% | |
| TATAAAGACTTCGCTTTCAT+TGG | + | chr1.4:71098168-71098187 | MS.gene07149:intron | 30.0% | |
| TATCAAACAATTCATGTCAC+GGG | - | chr1.4:71096880-71096899 | None:intergenic | 30.0% | |
| TATGTCAAACTGGAAACTTT+GGG | + | chr1.4:71099340-71099359 | MS.gene07149:intron | 30.0% | |
| TCAATCTCAAAATTGTGGTT+GGG | + | chr1.4:71099060-71099079 | MS.gene07149:intron | 30.0% | |
| TCATAACTATTAGGACAAGT+AGG | - | chr1.4:71096946-71096965 | None:intergenic | 30.0% | |
| TCCGTTTACAAGAATAAAGA+AGG | + | chr1.4:71098907-71098926 | MS.gene07149:intron | 30.0% | |
| TGAAGAAAAATTGTTTGGTC+GGG | + | chr1.4:71095677-71095696 | MS.gene07149:CDS | 30.0% | |
| TTATGTCAAACTGGAAACTT+TGG | + | chr1.4:71099339-71099358 | MS.gene07149:intron | 30.0% | |
| TTCCAGTTTGACATAATTCA+TGG | - | chr1.4:71099335-71099354 | None:intergenic | 30.0% | |
| TTGTGGTCTTTGTGTTAATT+AGG | + | chr1.4:71099640-71099659 | MS.gene07149:intron | 30.0% | |
| TTGTTAAACACAATTGGAAG+TGG | + | chr1.4:71097609-71097628 | MS.gene07149:intron | 30.0% | |
| ! | AATCTAAGGTATAGGACATT+GGG | - | chr1.4:71099232-71099251 | None:intergenic | 30.0% |
| ! | AATTTTCGGATTATCTTCCT+TGG | - | chr1.4:71095553-71095572 | None:intergenic | 30.0% |
| ! | ATCAACTGTTACTTACATGT+TGG | + | chr1.4:71098042-71098061 | MS.gene07149:intron | 30.0% |
| ! | ATTTTCGGATTATCTTCCTT+GGG | - | chr1.4:71095552-71095571 | None:intergenic | 30.0% |
| ! | CAAGCAATAAATCTTTTGGT+TGG | - | chr1.4:71098792-71098811 | None:intergenic | 30.0% |
| ! | CCAACTTTTTGCATTTAAGA+CGG | - | chr1.4:71095628-71095647 | None:intergenic | 30.0% |
| ! | CCACTATTGTATCCAATTTT+CGG | - | chr1.4:71095567-71095586 | None:intergenic | 30.0% |
| ! | CGCAACTTTTTGTAAAGATA+AGG | + | chr1.4:71099931-71099950 | MS.gene07149:intron | 30.0% |
| ! | CTCTCCAATCTTACAATTTT+GGG | - | chr1.4:71095526-71095545 | None:intergenic | 30.0% |
| ! | TATCATACCTTACTTGCTTT+TGG | + | chr1.4:71098974-71098993 | MS.gene07149:intron | 30.0% |
| ! | TGGGGTATTTATGTGTTAAA+TGG | + | chr1.4:71097997-71098016 | MS.gene07149:intron | 30.0% |
| ! | TGTATATGTCTGTTGAGTTT+TGG | + | chr1.4:71096445-71096464 | MS.gene07149:intron | 30.0% |
| ! | TTTGAAGCTATTAGTAGTAG+AGG | + | chr1.4:71100117-71100136 | MS.gene07149:intron | 30.0% |
| !! | AGCAATAAATCTTTTGGTTG+GGG | - | chr1.4:71098790-71098809 | None:intergenic | 30.0% |
| !! | ATGTCGGTTGAATTTTAAGT+AGG | + | chr1.4:71096312-71096331 | MS.gene07149:intron | 30.0% |
| !! | GCCTACTTTTAGATAATGAA+AGG | - | chr1.4:71096018-71096037 | None:intergenic | 30.0% |
| !! | GGCAAGGAAACTTTTTAAAA+AGG | + | chr1.4:71095722-71095741 | MS.gene07149:CDS | 30.0% |
| !! | TTCTACCGGTTATTTTATCA+TGG | + | chr1.4:71098853-71098872 | MS.gene07149:intron | 30.0% |
| !! | TTGGCCCCTTTTAAAAAAAA+TGG | - | chr1.4:71099998-71100017 | None:intergenic | 30.0% |
| !!! | ATGTGCTATTTTTCTCTCTT+TGG | - | chr1.4:71097925-71097944 | None:intergenic | 30.0% |
| !!! | GTGAATTGTTTCTTGTTTTG+AGG | + | chr1.4:71097548-71097567 | MS.gene07149:intron | 30.0% |
| !!! | TGGTTTTATGCAAAAGTTCT+AGG | + | chr1.4:71099023-71099042 | MS.gene07149:intron | 30.0% |
| !!! | TGTGCTATTTTTCTCTCTTT+GGG | - | chr1.4:71097924-71097943 | None:intergenic | 30.0% |
| !!! | TTGTTTTGAGGCATTTATTG+AGG | + | chr1.4:71097560-71097579 | MS.gene07149:intron | 30.0% |
| !!! | TTTTCTGTTAGGCTTTGTTT+GGG | - | chr1.4:71097359-71097378 | None:intergenic | 30.0% |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr1.4:71097114-71097133 | None:intergenic | 30.0% |
| AAAGTTGGGATGACATCAAT+TGG | + | chr1.4:71095640-71095659 | MS.gene07149:CDS | 35.0% | |
| AATAGAAAACCCTCCTCATT+TGG | + | chr1.4:71097098-71097117 | MS.gene07149:intron | 35.0% | |
| ACATCAATTGGAAAGACATC+AGG | + | chr1.4:71095652-71095671 | MS.gene07149:CDS | 35.0% | |
| ACCAATTGAAGATGGGAAAA+TGG | + | chr1.4:71098405-71098424 | MS.gene07149:intron | 35.0% | |
| ACGTAACATAGATAGAGTGA+AGG | - | chr1.4:71098832-71098851 | None:intergenic | 35.0% | |
| AGAAAGAGGTGGAAGAAAAA+TGG | + | chr1.4:71097400-71097419 | MS.gene07149:intron | 35.0% | |
| AGACCGATTGAAACATTAGT+GGG | + | chr1.4:71097478-71097497 | MS.gene07149:intron | 35.0% | |
| AGAGCATATTTCCCTAAACA+TGG | + | chr1.4:71099961-71099980 | MS.gene07149:intron | 35.0% | |
| AGATGGCAAAAGAAAAGGTA+AGG | + | chr1.4:71095965-71095984 | MS.gene07149:intron | 35.0% | |
| AGCATATTTCCCTAAACATG+GGG | + | chr1.4:71099963-71099982 | MS.gene07149:intron | 35.0% | |
| AGGACACAGTACAATGAAAA+TGG | + | chr1.4:71097580-71097599 | MS.gene07149:intron | 35.0% | |
| AGGGATGAAGAAAAACTGTT+TGG | + | chr1.4:71095864-71095883 | MS.gene07149:CDS | 35.0% | |
| AGGTTATCAAACAATTGAGG+TGG | + | chr1.4:71096698-71096717 | MS.gene07149:intron | 35.0% | |
| ATAGAAAGATGAGAAAGAGG+TGG | + | chr1.4:71097389-71097408 | MS.gene07149:intron | 35.0% | |
| ATATACTTGTCAGTAACGAC+CGG | - | chr1.4:71096495-71096514 | None:intergenic | 35.0% | |
| ATCTATGTTACGTCTTCTAC+CGG | + | chr1.4:71098839-71098858 | MS.gene07149:intron | 35.0% | |
| ATGTGAGAATCTGTTCCATA+AGG | - | chr1.4:71099538-71099557 | None:intergenic | 35.0% | |
| ATTAATGCAATTAGGGTTGC+AGG | + | chr1.4:71098337-71098356 | MS.gene07149:intron | 35.0% | |
| ATTCATCGTTGAAGGAAACA+AGG | + | chr1.4:71099284-71099303 | MS.gene07149:intron | 35.0% | |
| ATTCATGGGAAAACAAAGTC+TGG | + | chr1.4:71097635-71097654 | MS.gene07149:intron | 35.0% | |
| CAATGTCCTATACCTTAGAT+TGG | + | chr1.4:71099231-71099250 | MS.gene07149:intron | 35.0% | |
| CACAACAATAGAACAGTGTT+AGG | - | chr1.4:71098545-71098564 | None:intergenic | 35.0% | |
| CATCAATTGGAAAGACATCA+GGG | + | chr1.4:71095653-71095672 | MS.gene07149:CDS | 35.0% | |
| CCCTCATAAACCAAATTAGT+GGG | - | chr1.4:71097754-71097773 | None:intergenic | 35.0% | |
| CCGAAAATTGGATACAATAG+TGG | + | chr1.4:71095564-71095583 | MS.gene07149:CDS | 35.0% | |
| CCGTCTTAAATGCAAAAAGT+TGG | + | chr1.4:71095625-71095644 | MS.gene07149:CDS | 35.0% | |
| CTCTGATGAATTTGTCTTGT+TGG | + | chr1.4:71099003-71099022 | MS.gene07149:intron | 35.0% | |
| CTGCAAAAGTTTATGTTGAC+CGG | + | chr1.4:71096473-71096492 | MS.gene07149:intron | 35.0% | |
| GAGCATATTTCCCTAAACAT+GGG | + | chr1.4:71099962-71099981 | MS.gene07149:intron | 35.0% | |
| GCCATTCTTCTAATCATTCT+AGG | + | chr1.4:71100193-71100212 | MS.gene07149:CDS | 35.0% | |
| GGACACAGTACAATGAAAAT+GGG | + | chr1.4:71097581-71097600 | MS.gene07149:intron | 35.0% | |
| GGCATGAATAAACTGCATAT+TGG | + | chr1.4:71098063-71098082 | MS.gene07149:intron | 35.0% | |
| GTAGAAGAGATAGAGGAAAA+TGG | + | chr1.4:71097041-71097060 | MS.gene07149:intron | 35.0% | |
| GTGACCCAAAATTGTAAGAT+TGG | + | chr1.4:71095519-71095538 | MS.gene07149:CDS | 35.0% | |
| GTTGTGATCTAAAGGGAAAA+AGG | + | chr1.4:71098559-71098578 | MS.gene07149:intron | 35.0% | |
| TAGATTTGGACGATCTCTTT+CGG | + | chr1.4:71098645-71098664 | MS.gene07149:CDS | 35.0% | |
| TATTGTGTGACACATGATAC+TGG | + | chr1.4:71096252-71096271 | MS.gene07149:intron | 35.0% | |
| TCAACCGTTCACATTAGAAA+TGG | + | chr1.4:71100161-71100180 | MS.gene07149:CDS | 35.0% | |
| TCCCTCATAAACCAAATTAG+TGG | - | chr1.4:71097755-71097774 | None:intergenic | 35.0% | |
| TGAACAAGTAGAAGAGATAG+AGG | + | chr1.4:71097034-71097053 | MS.gene07149:intron | 35.0% | |
| TGAAGAAAAACTGTTTGGTC+GGG | + | chr1.4:71095869-71095888 | MS.gene07149:CDS | 35.0% | |
| TGATTAAGGACCCACTAATT+TGG | + | chr1.4:71097741-71097760 | MS.gene07149:intron | 35.0% | |
| TGGGTTACTTATTCGATAGT+GGG | + | chr1.4:71099079-71099098 | MS.gene07149:intron | 35.0% | |
| TTGGGTTACTTATTCGATAG+TGG | + | chr1.4:71099078-71099097 | MS.gene07149:intron | 35.0% | |
| TTTCATATCCCCACCTATTT+GGG | - | chr1.4:71099417-71099436 | None:intergenic | 35.0% | |
| ! | ACCCACTAATTTGGTTTATG+AGG | + | chr1.4:71097750-71097769 | MS.gene07149:intron | 35.0% |
| ! | AGAATTGGAGGGCTTTTTAT+TGG | + | chr1.4:71098684-71098703 | MS.gene07149:intron | 35.0% |
| ! | AGTTGACCAATCTAAGGTAT+AGG | - | chr1.4:71099240-71099259 | None:intergenic | 35.0% |
| ! | ATCGTCCAAATCTAGTGTTT+TGG | - | chr1.4:71098639-71098658 | None:intergenic | 35.0% |
| ! | ATTGTATTGGAGAAGGGTTT+TGG | + | chr1.4:71097133-71097152 | MS.gene07149:intron | 35.0% |
| ! | CAATCTAAGGTATAGGACAT+TGG | - | chr1.4:71099233-71099252 | None:intergenic | 35.0% |
| ! | CACATGATACTGGTGAATTT+TGG | + | chr1.4:71096262-71096281 | MS.gene07149:intron | 35.0% |
| ! | CATAACAAACTGAGAAGCAT+AGG | - | chr1.4:71096207-71096226 | None:intergenic | 35.0% |
| ! | CCCACTAATTTGGTTTATGA+GGG | + | chr1.4:71097751-71097770 | MS.gene07149:intron | 35.0% |
| ! | GCTCTCCAATCTTACAATTT+TGG | - | chr1.4:71095527-71095546 | None:intergenic | 35.0% |
| ! | GTTTGCAAAAGTAGCGATTT+TGG | - | chr1.4:71100017-71100036 | None:intergenic | 35.0% |
| ! | TCCATTTTCCCATCTTCAAT+TGG | - | chr1.4:71098409-71098428 | None:intergenic | 35.0% |
| ! | TGTATCAGAAGTGTATGTGT+TGG | + | chr1.4:71099732-71099751 | MS.gene07149:intron | 35.0% |
| ! | TTGTATTGGAGAAGGGTTTT+GGG | + | chr1.4:71097134-71097153 | MS.gene07149:intron | 35.0% |
| ! | TTTGAGGGGTGTAAAATATG+AGG | - | chr1.4:71097309-71097328 | None:intergenic | 35.0% |
| ! | TTTTACCTCTAGTTGTGCAA+GGG | + | chr1.4:71096227-71096246 | MS.gene07149:intron | 35.0% |
| !! | GAATTTTAAGTAGGATCCTG+TGG | + | chr1.4:71096321-71096340 | MS.gene07149:intron | 35.0% |
| !! | TACCGGTTATTTTATCATGG+CGG | + | chr1.4:71098856-71098875 | MS.gene07149:intron | 35.0% |
| !! | TTTTAAGGAAGCAATATCGG+AGG | + | chr1.4:71097786-71097805 | MS.gene07149:intron | 35.0% |
| !!! | ATCGCTACTTTTGCAAACTT+AGG | + | chr1.4:71100019-71100038 | MS.gene07149:intron | 35.0% |
| !!! | CTTTTCTGTTAGGCTTTGTT+TGG | - | chr1.4:71097360-71097379 | None:intergenic | 35.0% |
| !!! | GGCCAGGAAGTTTTTTAAAA+AGG | + | chr1.4:71095914-71095933 | MS.gene07149:CDS | 35.0% |
| !!! | TCGCTACTTTTGCAAACTTA+GGG | + | chr1.4:71100020-71100039 | MS.gene07149:intron | 35.0% |
| AAAATGGGAAGGAGAGCTTT+GGG | + | chr1.4:71097057-71097076 | MS.gene07149:intron | 40.0% | |
| AAAGAGTTCATCGAGTCAGA+TGG | + | chr1.4:71095948-71095967 | MS.gene07149:CDS | 40.0% | |
| AAAGGCTTAGAGGTAGAAAG+TGG | + | chr1.4:71098135-71098154 | MS.gene07149:intron | 40.0% | |
| AAAGTAGTGCCTAAGGTGAT+GGG | + | chr1.4:71097978-71097997 | MS.gene07149:intron | 40.0% | |
| AACTCGCAAACAAAGCCTTA+AGG | - | chr1.4:71096976-71096995 | None:intergenic | 40.0% | |
| AAGGCTTAGAGGTAGAAAGT+GGG | + | chr1.4:71098136-71098155 | MS.gene07149:intron | 40.0% | |
| AGAGAACTGTGAACTTCCTT+GGG | + | chr1.4:71098595-71098614 | MS.gene07149:CDS | 40.0% | |
| AGAGATAGAGGAAAATGGGA+AGG | + | chr1.4:71097046-71097065 | MS.gene07149:intron | 40.0% | |
| ATGATATCAAGCACATCCCA+AGG | - | chr1.4:71098614-71098633 | None:intergenic | 40.0% | |
| ATGCATTGAGCAACCCAAAT+AGG | + | chr1.4:71099401-71099420 | MS.gene07149:intron | 40.0% | |
| ATTGAGCAACCCAAATAGGT+GGG | + | chr1.4:71099405-71099424 | MS.gene07149:intron | 40.0% | |
| CAAAAGTGACCCCATGTTTA+GGG | - | chr1.4:71099975-71099994 | None:intergenic | 40.0% | |
| CACAAAGACCACAAGTAACA+CGG | - | chr1.4:71099634-71099653 | None:intergenic | 40.0% | |
| CAGATTCTCACATGTTGGAT+TGG | + | chr1.4:71099545-71099564 | MS.gene07149:intron | 40.0% | |
| CATAAATACCCCATCACCTT+AGG | - | chr1.4:71097990-71098009 | None:intergenic | 40.0% | |
| CATCACAGTTGACCAATCTA+AGG | - | chr1.4:71099246-71099265 | None:intergenic | 40.0% | |
| CTTTCATATCCCCACCTATT+TGG | - | chr1.4:71099418-71099437 | None:intergenic | 40.0% | |
| GAAGCTATTAGTAGTAGAGG+TGG | + | chr1.4:71100120-71100139 | MS.gene07149:intron | 40.0% | |
| GAATCACAAAGTAGTGCCTA+AGG | + | chr1.4:71097971-71097990 | MS.gene07149:intron | 40.0% | |
| GAGACCGATTGAAACATTAG+TGG | + | chr1.4:71097477-71097496 | MS.gene07149:intron | 40.0% | |
| GAGTCAGATGGCAAAAGAAA+AGG | + | chr1.4:71095960-71095979 | MS.gene07149:CDS | 40.0% | |
| GATACAATAGTGGTAAGCGT+TGG | + | chr1.4:71095574-71095593 | MS.gene07149:CDS | 40.0% | |
| GATGCAATATTGGTAAGCCA+TGG | + | chr1.4:71095766-71095785 | MS.gene07149:CDS | 40.0% | |
| GCAATATCGGAGGACTTAAT+AGG | + | chr1.4:71097796-71097815 | MS.gene07149:intron | 40.0% | |
| GCATTTGCCAAAAGCAAGTA+AGG | - | chr1.4:71098984-71099003 | None:intergenic | 40.0% | |
| GTCGGGATTTGAAAGCAATA+CGG | + | chr1.4:71095694-71095713 | MS.gene07149:CDS | 40.0% | |
| TAAAGGGAAAAAGGCGATGA+AGG | + | chr1.4:71098568-71098587 | MS.gene07149:intron | 40.0% | |
| TCGGGATTTGAAAGCAATAC+GGG | + | chr1.4:71095695-71095714 | MS.gene07149:CDS | 40.0% | |
| TGAGAATCTGTTCCATAAGG+AGG | - | chr1.4:71099535-71099554 | None:intergenic | 40.0% | |
| TGGAACAGATTCTCACATGT+TGG | + | chr1.4:71099540-71099559 | MS.gene07149:intron | 40.0% | |
| TTAGGGTTGCAGGACTTAAT+AGG | + | chr1.4:71098347-71098366 | MS.gene07149:intron | 40.0% | |
| TTAGTTCCTCCAAATGAGGA+GGG | - | chr1.4:71097110-71097129 | None:intergenic | 40.0% | |
| TTGGTTGGGGAAGCTAATAA+AGG | - | chr1.4:71098777-71098796 | None:intergenic | 40.0% | |
| TTTGAAAGCAATACGGGACA+AGG | + | chr1.4:71095701-71095720 | MS.gene07149:CDS | 40.0% | |
| ! | AAGGAAAGGAAAGGCTTTGA+GGG | - | chr1.4:71097324-71097343 | None:intergenic | 40.0% |
| ! | AGTGGTTGATTCATCGTTGA+AGG | + | chr1.4:71099276-71099295 | MS.gene07149:intron | 40.0% |
| ! | CCAACTTTTGCCATCTAAGA+GGG | - | chr1.4:71095820-71095839 | None:intergenic | 40.0% |
| ! | CTGTGATGAGCAACTTTTAG+TGG | + | chr1.4:71099258-71099277 | MS.gene07149:intron | 40.0% |
| ! | GTTTTACCTCTAGTTGTGCA+AGG | + | chr1.4:71096226-71096245 | MS.gene07149:intron | 40.0% |
| ! | TACCTGGTTCGATTCTCTTT+GGG | + | chr1.4:71098271-71098290 | MS.gene07149:intron | 40.0% |
| ! | TCCAACTTTTGCCATCTAAG+AGG | - | chr1.4:71095821-71095840 | None:intergenic | 40.0% |
| ! | TGTATTGGAGAAGGGTTTTG+GGG | + | chr1.4:71097135-71097154 | MS.gene07149:intron | 40.0% |
| ! | TTGTTTTCATCCTCTGACCA+TGG | - | chr1.4:71095786-71095805 | None:intergenic | 40.0% |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | - | chr1.4:71097111-71097130 | None:intergenic | 40.0% |
| !! | ACCGGTTATTTTATCATGGC+GGG | + | chr1.4:71098857-71098876 | MS.gene07149:intron | 40.0% |
| !! | ATTCGATAGTGGGAAAACCA+GGG | + | chr1.4:71099089-71099108 | MS.gene07149:intron | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr1.4:71096976-71096995 | MS.gene07149:intron | 40.0% |
| !! | TATTCGATAGTGGGAAAACC+AGG | + | chr1.4:71099088-71099107 | MS.gene07149:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr1.4:71097352-71097371 | None:intergenic | 40.0% |
| !!! | CAGCAATTTTGGGACGAAAA+GGG | - | chr1.4:71099875-71099894 | None:intergenic | 40.0% |
| !!! | CGCTACTTTTGCAAACTTAG+GGG | + | chr1.4:71100021-71100040 | MS.gene07149:intron | 40.0% |
| !!! | GCTACTTTTGCAAACTTAGG+GGG | + | chr1.4:71100022-71100041 | MS.gene07149:intron | 40.0% |
| !!! | TCAGCAATTTTGGGACGAAA+AGG | - | chr1.4:71099876-71099895 | None:intergenic | 40.0% |
| AAAGTAGGCTCAACTACCCA+AGG | + | chr1.4:71096029-71096048 | MS.gene07149:intron | 45.0% | |
| AAATGGGAAGGAGAGCTTTG+GGG | + | chr1.4:71097058-71097077 | MS.gene07149:intron | 45.0% | |
| AAATGTCACCAAGCTGTACC+TGG | + | chr1.4:71098255-71098274 | MS.gene07149:intron | 45.0% | |
| AAGTAGTGCCTAAGGTGATG+GGG | + | chr1.4:71097979-71097998 | MS.gene07149:intron | 45.0% | |
| AATCCACAGTTGAGAACCAC+AGG | - | chr1.4:71096065-71096084 | None:intergenic | 45.0% | |
| ACGCCACATGTCCCAAAAAA+GGG | + | chr1.4:71099900-71099919 | MS.gene07149:intron | 45.0% | |
| AGAAAACCCTCCTCATTTGG+AGG | + | chr1.4:71097101-71097120 | MS.gene07149:intron | 45.0% | |
| AGGGGAAGGCTTGGAAAAAA+AGG | + | chr1.4:71097009-71097028 | MS.gene07149:intron | 45.0% | |
| ATAGTCCCTTGCACAACTAG+AGG | - | chr1.4:71096235-71096254 | None:intergenic | 45.0% | |
| ATTAGTAGTAGAGGTGGCTC+TGG | + | chr1.4:71100126-71100145 | MS.gene07149:intron | 45.0% | |
| CAAAGTAGTGCCTAAGGTGA+TGG | + | chr1.4:71097977-71097996 | MS.gene07149:intron | 45.0% | |
| CAAGCTAAGTACCCCTATGT+TGG | - | chr1.4:71099170-71099189 | None:intergenic | 45.0% | |
| CACAGGTTCCTAGTTACCTT+GGG | - | chr1.4:71096048-71096067 | None:intergenic | 45.0% | |
| CAGAGAACTGTGAACTTCCT+TGG | + | chr1.4:71098594-71098613 | MS.gene07149:CDS | 45.0% | |
| CATTGAGCAACCCAAATAGG+TGG | + | chr1.4:71099404-71099423 | MS.gene07149:intron | 45.0% | |
| CCCCGCCATGATAAAATAAC+CGG | - | chr1.4:71098861-71098880 | None:intergenic | 45.0% | |
| CCCTCTTAGATGGCAAAAGT+TGG | + | chr1.4:71095817-71095836 | MS.gene07149:CDS | 45.0% | |
| CCGATTGAAACATTAGTGGG+CGG | + | chr1.4:71097481-71097500 | MS.gene07149:intron | 45.0% | |
| CCGCCCACTAATGTTTCAAT+CGG | - | chr1.4:71097484-71097503 | None:intergenic | 45.0% | |
| CTCAACTACCCAAGGTAACT+AGG | + | chr1.4:71096037-71096056 | MS.gene07149:intron | 45.0% | |
| GAAAATGGGAAGGAGAGCTT+TGG | + | chr1.4:71097056-71097075 | MS.gene07149:intron | 45.0% | |
| GAAGGAAAGGAAAGGCTTTG+AGG | - | chr1.4:71097325-71097344 | None:intergenic | 45.0% | |
| GCAAAAGTGACCCCATGTTT+AGG | - | chr1.4:71099976-71099995 | None:intergenic | 45.0% | |
| GTTGAATGCGATTCAGGACA+AGG | + | chr1.4:71095893-71095912 | MS.gene07149:CDS | 45.0% | |
| TAAGATTGGAGAGCTTCCCA+AGG | + | chr1.4:71095533-71095552 | MS.gene07149:CDS | 45.0% | |
| TAGAGGTAGAAAGTGGGCAA+CGG | + | chr1.4:71098142-71098161 | MS.gene07149:intron | 45.0% | |
| TAGTGATCCAACCAACAGTG+CGG | + | chr1.4:71095497-71095516 | MS.gene07149:CDS | 45.0% | |
| TATTGGTAAGCCATGGTCAG+AGG | + | chr1.4:71095773-71095792 | MS.gene07149:CDS | 45.0% | |
| TCACTGACAAGGCCAACATA+GGG | + | chr1.4:71099155-71099174 | MS.gene07149:intron | 45.0% | |
| TTGAGCAACCCAAATAGGTG+GGG | + | chr1.4:71099406-71099425 | MS.gene07149:intron | 45.0% | |
| TTTCCGGTGTGTGCAAGAAT+TGG | + | chr1.4:71098669-71098688 | MS.gene07149:intron | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr1.4:71096981-71097000 | MS.gene07149:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr1.4:71097347-71097366 | None:intergenic | 45.0% |
| ! | GACGATCTCTTTCGGTTTTC+CGG | + | chr1.4:71098653-71098672 | MS.gene07149:CDS | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | - | chr1.4:71099885-71099904 | None:intergenic | 45.0% |
| ! | GTACCTGGTTCGATTCTCTT+TGG | + | chr1.4:71098270-71098289 | MS.gene07149:intron | 45.0% |
| ! | TGAAACATTAGTGGGCGGTA+GGG | + | chr1.4:71097486-71097505 | MS.gene07149:intron | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | - | chr1.4:71099886-71099905 | None:intergenic | 45.0% |
| ! | TTGAAACATTAGTGGGCGGT+AGG | + | chr1.4:71097485-71097504 | MS.gene07149:intron | 45.0% |
| !! | AGGAAAGGAAAGGCTTTGAG+GGG | - | chr1.4:71097323-71097342 | None:intergenic | 45.0% |
| !! | CCGGTTATTTTATCATGGCG+GGG | + | chr1.4:71098858-71098877 | MS.gene07149:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr1.4:71096980-71096999 | MS.gene07149:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr1.4:71097348-71097367 | None:intergenic | 45.0% |
| !! | GTATTGGAGAAGGGTTTTGG+GGG | + | chr1.4:71097136-71097155 | MS.gene07149:intron | 45.0% |
| !! | GTGAACGGTTGATAACCTGT+TGG | - | chr1.4:71100153-71100172 | None:intergenic | 45.0% |
| !! | GTTGTACACCGTGTTACTTG+TGG | + | chr1.4:71099623-71099642 | MS.gene07149:intron | 45.0% |
| !!! | GCGATTATGGCCCCTTTTTT+GGG | - | chr1.4:71099914-71099933 | None:intergenic | 45.0% |
| !!! | TATTGGAGAAGGGTTTTGGG+GGG | + | chr1.4:71097137-71097156 | MS.gene07149:intron | 45.0% |
| !!! | TGCGATTATGGCCCCTTTTT+TGG | - | chr1.4:71099915-71099934 | None:intergenic | 45.0% |
| AAGCAATACGGGACAAGGCA+AGG | + | chr1.4:71095706-71095725 | MS.gene07149:CDS | 50.0% | |
| ATGAAGTCAACAACCCTCCC+TGG | - | chr1.4:71099109-71099128 | None:intergenic | 50.0% | |
| ATGCTTCCAGCTCCTCCTTA+TGG | + | chr1.4:71099520-71099539 | MS.gene07149:intron | 50.0% | |
| CACCCAAAGAGAATCGAACC+AGG | - | chr1.4:71098276-71098295 | None:intergenic | 50.0% | |
| CACTGACAAGGCCAACATAG+GGG | + | chr1.4:71099156-71099175 | MS.gene07149:intron | 50.0% | |
| CCAAGGTAACTAGGAACCTG+TGG | + | chr1.4:71096046-71096065 | MS.gene07149:intron | 50.0% | |
| CCACAGGTTCCTAGTTACCT+TGG | - | chr1.4:71096049-71096068 | None:intergenic | 50.0% | |
| CCTCCAATTCTTGCACACAC+CGG | - | chr1.4:71098675-71098694 | None:intergenic | 50.0% | |
| CGCCACATGTCCCAAAAAAG+GGG | + | chr1.4:71099901-71099920 | MS.gene07149:intron | 50.0% | |
| CGGTGTGTGCAAGAATTGGA+GGG | + | chr1.4:71098673-71098692 | MS.gene07149:intron | 50.0% | |
| GAACCTGTGGTTCTCAACTG+TGG | + | chr1.4:71096059-71096078 | MS.gene07149:intron | 50.0% | |
| GAATCGAACCAGGTACAGCT+TGG | - | chr1.4:71098266-71098285 | None:intergenic | 50.0% | |
| GACGCCACATGTCCCAAAAA+AGG | + | chr1.4:71099899-71099918 | MS.gene07149:intron | 50.0% | |
| GTCACTGACAAGGCCAACAT+AGG | + | chr1.4:71099154-71099173 | MS.gene07149:intron | 50.0% | |
| TCGGGAGTTGAATGCGATTC+AGG | + | chr1.4:71095887-71095906 | MS.gene07149:CDS | 50.0% | |
| TCTGTTCCATAAGGAGGAGC+TGG | - | chr1.4:71099529-71099548 | None:intergenic | 50.0% | |
| TTGGAGGGGAAGGAAAGGAA+AGG | - | chr1.4:71097333-71097352 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr1.4:71096986-71097005 | MS.gene07149:intron | 50.0% | |
| ! | AATGGGAAGGAGAGCTTTGG+GGG | + | chr1.4:71097059-71097078 | MS.gene07149:intron | 50.0% |
| !! | AGGGAGGGTTGTTGACTTCA+TGG | + | chr1.4:71099108-71099127 | MS.gene07149:intron | 50.0% |
| !! | ATTTTGGGTCACCGCACTGT+TGG | - | chr1.4:71095511-71095530 | None:intergenic | 50.0% |
| !! | GATAGTGGGAAAACCAGGGA+GGG | + | chr1.4:71099093-71099112 | MS.gene07149:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr1.4:71096979-71096998 | MS.gene07149:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr1.4:71097349-71097368 | None:intergenic | 50.0% |
| !!! | AGAAGGGTTTTGGGGGGTTT+TGG | + | chr1.4:71097143-71097162 | MS.gene07149:intron | 50.0% |
| ATGCGATTCAGGACAAGGCC+AGG | + | chr1.4:71095898-71095917 | MS.gene07149:CDS | 55.0% | |
| CCGGTGTGTGCAAGAATTGG+AGG | + | chr1.4:71098672-71098691 | MS.gene07149:intron | 55.0% | |
| GCGCTCAAGTCCCTCTTAGA+TGG | + | chr1.4:71095807-71095826 | MS.gene07149:CDS | 55.0% | |
| GGAGTTTGGAGGGGAAGGAA+AGG | - | chr1.4:71097338-71097357 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr1.4:71096985-71097004 | MS.gene07149:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr1.4:71097343-71097362 | None:intergenic | 55.0% | |
| TTGCACACTTGTGCGACGCA+CGG | + | chr1.4:71096610-71096629 | MS.gene07149:intron | 55.0% | |
| ! | AACATTAGTGGGCGGTAGGG+AGG | + | chr1.4:71097489-71097508 | MS.gene07149:intron | 55.0% |
| !! | ATGGGAAGGAGAGCTTTGGG+GGG | + | chr1.4:71097060-71097079 | MS.gene07149:intron | 55.0% |
| !! | CGATAGTGGGAAAACCAGGG+AGG | + | chr1.4:71099092-71099111 | MS.gene07149:intron | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | + | chr1.4:71097146-71097165 | MS.gene07149:intron | 55.0% |
| !!! | GGCCCCTTTTTTGGGACATG+TGG | - | chr1.4:71099906-71099925 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | + | chr1.4:71097147-71097166 | MS.gene07149:intron | 55.0% |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr1.4:71096990-71097009 | MS.gene07149:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr1.4:71096991-71097010 | MS.gene07149:intron | 60.0% | |
| TGCACACTTGTGCGACGCAC+GGG | + | chr1.4:71096611-71096630 | MS.gene07149:intron | 60.0% | |
| TGGGTCACCGCACTGTTGGT+TGG | - | chr1.4:71095507-71095526 | None:intergenic | 60.0% | |
| ! | ATTAGTGGGCGGTAGGGAGG+TGG | + | chr1.4:71097492-71097511 | MS.gene07149:intron | 60.0% |
| !! | AGAGGTGGCTCTGGTCCAAC+AGG | + | chr1.4:71100135-71100154 | MS.gene07149:intron | 60.0% |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr1.4:71096989-71097008 | MS.gene07149:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr1.4:71096995-71097014 | MS.gene07149:intron | 65.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | + | chr1.4:71097000-71097019 | MS.gene07149:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71095486 | 71100218 | 71095486 | ID=MS.gene07149 |
| chr1.4 | mRNA | 71095486 | 71100218 | 71095486 | ID=MS.gene07149.t1;Parent=MS.gene07149 |
| chr1.4 | exon | 71095486 | 71095981 | 71095486 | ID=MS.gene07149.t1.exon1;Parent=MS.gene07149.t1 |
| chr1.4 | CDS | 71095486 | 71095981 | 71095486 | ID=cds.MS.gene07149.t1;Parent=MS.gene07149.t1 |
| chr1.4 | exon | 71098573 | 71098674 | 71098573 | ID=MS.gene07149.t1.exon2;Parent=MS.gene07149.t1 |
| chr1.4 | CDS | 71098573 | 71098674 | 71098573 | ID=cds.MS.gene07149.t1;Parent=MS.gene07149.t1 |
| chr1.4 | exon | 71100157 | 71100218 | 71100157 | ID=MS.gene07149.t1.exon3;Parent=MS.gene07149.t1 |
| chr1.4 | CDS | 71100157 | 71100218 | 71100157 | ID=cds.MS.gene07149.t1;Parent=MS.gene07149.t1 |
| Gene Sequence |
| Protein sequence |
