Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072346.t1 | XP_003625176.1 | 99.5 | 387 | 2 | 0 | 1 | 387 | 1 | 387 | 1.20E-215 | 758.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072346.t1 | Q6IWY1 | 74.0 | 377 | 98 | 0 | 1 | 377 | 1 | 377 | 2.2e-165 | 583.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072346.t1 | G7KTL6 | 99.5 | 387 | 2 | 0 | 1 | 387 | 1 | 387 | 8.7e-216 | 758.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene072346 | 0.835746 | 1.40E-56 | -1.69E-46 |
| MS.gene050630 | MS.gene072346 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene072346 | 0.823768 | 1.16E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene072346 | 0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene072346 | 0.827955 | 1.18E-54 | -1.69E-46 |
| MS.gene052880 | MS.gene072346 | 0.811087 | 8.34E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene072346 | 0.811302 | 7.49E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene072346 | 0.800773 | 1.23E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene072346 | 0.802121 | 6.52E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072346.t1 | MTR_7g092280 | 99.483 | 387 | 2 | 0 | 1 | 387 | 1 | 387 | 0.0 | 783 |
| MS.gene072346.t1 | MTR_1g052685 | 79.070 | 387 | 80 | 1 | 1 | 387 | 1 | 386 | 0.0 | 614 |
| MS.gene072346.t1 | MTR_2g097980 | 58.065 | 372 | 143 | 1 | 1 | 372 | 1 | 359 | 6.96e-163 | 462 |
| MS.gene072346.t1 | MTR_4g069140 | 33.468 | 248 | 162 | 2 | 82 | 329 | 96 | 340 | 2.04e-46 | 163 |
| MS.gene072346.t1 | MTR_1g021925 | 32.472 | 271 | 169 | 3 | 79 | 349 | 93 | 349 | 1.57e-42 | 153 |
| MS.gene072346.t1 | MTR_8g099620 | 41.398 | 186 | 54 | 3 | 129 | 314 | 6 | 136 | 6.69e-39 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072346.t1 | AT3G57650 | 73.615 | 379 | 99 | 1 | 3 | 381 | 2 | 379 | 0.0 | 597 |
| MS.gene072346.t1 | AT1G51260 | 60.656 | 366 | 144 | 0 | 1 | 366 | 1 | 366 | 5.91e-174 | 490 |
| MS.gene072346.t1 | AT3G18850 | 32.794 | 247 | 156 | 4 | 83 | 324 | 68 | 309 | 9.49e-41 | 147 |
| MS.gene072346.t1 | AT3G18850 | 32.794 | 247 | 156 | 4 | 83 | 324 | 91 | 332 | 1.39e-40 | 147 |
| MS.gene072346.t1 | AT3G18850 | 32.794 | 247 | 156 | 4 | 83 | 324 | 91 | 332 | 1.39e-40 | 147 |
| MS.gene072346.t1 | AT3G18850 | 32.794 | 247 | 156 | 4 | 83 | 324 | 91 | 332 | 1.39e-40 | 147 |
| MS.gene072346.t1 | AT3G18850 | 32.794 | 247 | 156 | 4 | 83 | 324 | 91 | 332 | 1.39e-40 | 147 |
| MS.gene072346.t1 | AT1G75020 | 35.111 | 225 | 145 | 1 | 83 | 307 | 96 | 319 | 4.09e-40 | 146 |
| MS.gene072346.t1 | AT1G75020 | 35.111 | 225 | 145 | 1 | 83 | 307 | 96 | 319 | 4.09e-40 | 146 |
| MS.gene072346.t1 | AT3G18850 | 31.579 | 190 | 120 | 4 | 140 | 324 | 17 | 201 | 2.02e-25 | 103 |
Find 94 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCATCGTTAATTTCTTTC+AGG | 0.146587 | 7.4:-16578487 | MS.gene072346:intron |
| GCAACAGCTTCATCTGTTTC+TGG | 0.186144 | 7.4:+16573816 | None:intergenic |
| ATGATTTCCCTCTTCCATTT+TGG | 0.194753 | 7.4:-16576140 | MS.gene072346:CDS |
| TTTGGTTTGGCAGTTGTTAC+TGG | 0.220896 | 7.4:-16573231 | MS.gene072346:CDS |
| TTATACTTCACCTTAGTTCT+AGG | 0.221261 | 7.4:+16576012 | None:intergenic |
| CTAGGAATCAAAACGTTTCT+AGG | 0.227870 | 7.4:+16576030 | None:intergenic |
| TTTGCAGGGGCTACCTTGGC+CGG | 0.287311 | 7.4:+16573162 | None:intergenic |
| TACAATGCTAAGGCTCTTAC+AGG | 0.293441 | 7.4:-16574310 | MS.gene072346:CDS |
| CTTCTACATATGCAGGTAAT+TGG | 0.299535 | 7.4:-16576411 | MS.gene072346:intron |
| CTAACCGCAAGAGGCTTTAT+TGG | 0.301836 | 7.4:+16573476 | None:intergenic |
| TGGGGCTTTGTGGTTGTTGC+AGG | 0.307070 | 7.4:-16573318 | MS.gene072346:CDS |
| TGGAGCAGGTAGCTCTATCT+TGG | 0.336467 | 7.4:-16573338 | MS.gene072346:intron |
| ACAAAGAGAGCCAACCAAAA+TGG | 0.339909 | 7.4:+16576126 | None:intergenic |
| GGCCTGCTCTTCTTCGCTTC+CGG | 0.349777 | 7.4:-16578510 | MS.gene072346:CDS |
| TATATTTCCAGTCAGGTATA+CGG | 0.361628 | 7.4:-16576170 | MS.gene072346:intron |
| AACTTGTTTGGCTTATTGAT+TGG | 0.370682 | 7.4:-16577740 | MS.gene072346:CDS |
| TGGTTGGCTCTCTTTGTAGA+AGG | 0.370999 | 7.4:-16576120 | MS.gene072346:CDS |
| TGTTGTGGCTGGAACTTGTT+TGG | 0.378658 | 7.4:-16577752 | MS.gene072346:CDS |
| CGGCTTTGCAGGGGCTACCT+TGG | 0.380057 | 7.4:+16573158 | None:intergenic |
| TGTAAGAGCCTTAGCATTGT+AGG | 0.383761 | 7.4:+16574312 | None:intergenic |
| ATCACAGAAGTGATATTGAT+TGG | 0.392235 | 7.4:-16577207 | MS.gene072346:CDS |
| AGCTCTATCTTGGGGCTTTG+TGG | 0.399085 | 7.4:-16573328 | MS.gene072346:CDS |
| ATCAAAACGTTTCTAGGAAC+AGG | 0.408421 | 7.4:+16576036 | None:intergenic |
| TTGTTTGTCATTTATAGCCT+CGG | 0.414289 | 7.4:+16573116 | None:intergenic |
| TGATTGGTGGGCTGGAGTTA+AGG | 0.416079 | 7.4:-16577724 | MS.gene072346:intron |
| CAGGAATATGCAACCTCCAC+TGG | 0.418356 | 7.4:-16576063 | MS.gene072346:CDS |
| GTAGGAGCAGGTGAACTCTT+GGG | 0.419853 | 7.4:+16574330 | None:intergenic |
| AGTGATATTGATTGGCTTGT+TGG | 0.423156 | 7.4:-16577199 | MS.gene072346:CDS |
| GGAGCAGGTAGCTCTATCTT+GGG | 0.431261 | 7.4:-16573337 | MS.gene072346:intron |
| TGTCAAATTATTAGCTGCTC+AGG | 0.434589 | 7.4:-16576082 | MS.gene072346:CDS |
| TTGTTTGGCTTATTGATTGG+TGG | 0.438156 | 7.4:-16577737 | MS.gene072346:CDS |
| TTGCAGGGGCTACCTTGGCC+GGG | 0.439197 | 7.4:+16573163 | None:intergenic |
| ATTTGTACAGAAGGATCAAC+CGG | 0.447623 | 7.4:-16577788 | MS.gene072346:CDS |
| TGTAGGAGCAGGTGAACTCT+TGG | 0.448570 | 7.4:+16574329 | None:intergenic |
| TGGCTTATTGATTGGTGGGC+TGG | 0.450389 | 7.4:-16577732 | MS.gene072346:CDS |
| TATTGATTGGCTTGTTGGAT+GGG | 0.454656 | 7.4:-16577194 | MS.gene072346:CDS |
| GGTGGCAGAACTGTTGTGGC+TGG | 0.463743 | 7.4:-16577763 | MS.gene072346:CDS |
| ATAGCAATGAAGACCATTGT+AGG | 0.466450 | 7.4:+16573283 | None:intergenic |
| AACATGATCAAACAGCGTTC+AGG | 0.471064 | 7.4:-16576906 | MS.gene072346:intron |
| GGCCGGAAGCGAAGAAGAGC+AGG | 0.472011 | 7.4:+16578508 | None:intergenic |
| TGTTTGGCTTATTGATTGGT+GGG | 0.485633 | 7.4:-16577736 | MS.gene072346:CDS |
| CCTTGGCCCAACTTCTCTCC+AGG | 0.488070 | 7.4:+16576358 | None:intergenic |
| AGCCACTGTTATGTCGTAAA+CGG | 0.489173 | 7.4:+16574356 | None:intergenic |
| GCTGCTGTTGTGGTTCCACT+AGG | 0.490219 | 7.4:-16578531 | MS.gene072346:CDS |
| CCATCAAACTAAAAGTTTCG+CGG | 0.502575 | 7.4:+16577418 | None:intergenic |
| ATATTGATTGGCTTGTTGGA+TGG | 0.507298 | 7.4:-16577195 | MS.gene072346:CDS |
| TTTCAGTGATCAAGAGCTGC+AGG | 0.514777 | 7.4:-16573510 | MS.gene072346:CDS |
| AGCCTTAGCATTGTAGGAGC+AGG | 0.515820 | 7.4:+16574318 | None:intergenic |
| TATTGCAGCGGCTGCTGTTG+TGG | 0.515967 | 7.4:-16578541 | MS.gene072346:CDS |
| AAACAGCGTTCAGGTTGCCT+TGG | 0.519603 | 7.4:-16576897 | MS.gene072346:intron |
| CCTGGAGAGAAGTTGGGCCA+AGG | 0.521879 | 7.4:-16576358 | MS.gene072346:CDS |
| TAGAGATATATTTGTGGCCA+AGG | 0.522172 | 7.4:-16573784 | MS.gene072346:intron |
| TGTTTGTCATTTATAGCCTC+GGG | 0.526030 | 7.4:+16573117 | None:intergenic |
| TACATATGCAGGTAATTGGC+TGG | 0.527476 | 7.4:-16576407 | MS.gene072346:intron |
| TTCATTGCTATCATCATGGA+AGG | 0.538570 | 7.4:-16573271 | MS.gene072346:CDS |
| AGAGCCAACCAAAATGGAAG+AGG | 0.546286 | 7.4:+16576132 | None:intergenic |
| GGTCTTCATTGCTATCATCA+TGG | 0.551611 | 7.4:-16573275 | MS.gene072346:CDS |
| AGAGCGTTCAAACCCGGCCA+AGG | 0.559503 | 7.4:-16573175 | MS.gene072346:CDS |
| CAGAAGGATCAACCGGGTGG+TGG | 0.569650 | 7.4:-16577781 | MS.gene072346:CDS |
| ACAATGCTAAGGCTCTTACA+GGG | 0.571888 | 7.4:-16574309 | MS.gene072346:CDS |
| ACAGGCAGAGCGTTCAAACC+CGG | 0.574054 | 7.4:-16573181 | MS.gene072346:CDS |
| TAGGAGCAGGTGAACTCTTG+GGG | 0.575579 | 7.4:+16574331 | None:intergenic |
| GGCGGGCATGGCTATTGCAG+CGG | 0.575991 | 7.4:-16578553 | None:intergenic |
| AAAGAAATTAACGATGAGGC+CGG | 0.576745 | 7.4:+16578491 | None:intergenic |
| CACCTGCTCCTACAATGCTA+AGG | 0.582939 | 7.4:-16574320 | MS.gene072346:CDS |
| TGTCGAAGAATTTGTACAGA+AGG | 0.588476 | 7.4:-16577797 | MS.gene072346:CDS |
| CTGTACAAATTCTTCGACAG+CGG | 0.589374 | 7.4:+16577801 | None:intergenic |
| GAAATCGTCAAAGTTTCTGC+CGG | 0.597725 | 7.4:-16576853 | MS.gene072346:intron |
| GCGAAGAAGAGCAGGCCTAG+TGG | 0.598765 | 7.4:+16578516 | None:intergenic |
| ACTGTTATGTCGTAAACGGC+AGG | 0.607362 | 7.4:+16574360 | None:intergenic |
| GGGTGGTGGCAGAACTGTTG+TGG | 0.609128 | 7.4:-16577767 | MS.gene072346:CDS |
| GAGCCAACCAAAATGGAAGA+GGG | 0.611045 | 7.4:+16576133 | None:intergenic |
| ACAACAGTTCTGCCACCACC+CGG | 0.612737 | 7.4:+16577769 | None:intergenic |
| AGGAAGTATCTAACCGCAAG+AGG | 0.613823 | 7.4:+16573467 | None:intergenic |
| GAGCAGGTAGCTCTATCTTG+GGG | 0.613961 | 7.4:-16573336 | MS.gene072346:intron |
| CAATGCTAAGGCTCTTACAG+GGG | 0.628628 | 7.4:-16574308 | MS.gene072346:CDS |
| AAACAAGGAGGAACAACCCG+AGG | 0.629915 | 7.4:-16573133 | MS.gene072346:CDS |
| GTTAGACAAACATGTAGCTG+AGG | 0.641749 | 7.4:-16573537 | MS.gene072346:CDS |
| GTGGTGTAGAGATATATTTG+TGG | 0.645246 | 7.4:-16573790 | MS.gene072346:CDS |
| AGGAACAGGCAATCCAGTGG+AGG | 0.661011 | 7.4:+16576050 | None:intergenic |
| CCTGAAAGAAATTAACGATG+AGG | 0.675461 | 7.4:+16578487 | None:intergenic |
| TCTAGGAACAGGCAATCCAG+TGG | 0.676511 | 7.4:+16576047 | None:intergenic |
| GCAGTGTTAAGTTCCTACAA+TGG | 0.685650 | 7.4:-16573296 | MS.gene072346:CDS |
| TCACTGCTAGAGTACTGCCA+AGG | 0.686243 | 7.4:+16576880 | None:intergenic |
| TCGACCAATAAAGCCTCTTG+CGG | 0.688167 | 7.4:-16573480 | MS.gene072346:intron |
| TCATTGCTATCATCATGGAA+GGG | 0.691790 | 7.4:-16573270 | MS.gene072346:CDS |
| AGGTAATTGGCTGGTCAATG+TGG | 0.693841 | 7.4:-16576398 | MS.gene072346:CDS |
| CTTACAGGGGAAACGTTCAG+TGG | 0.694618 | 7.4:-16574295 | MS.gene072346:intron |
| GCTCCAGGTCGAAATATACA+CGG | 0.702623 | 7.4:-16577442 | MS.gene072346:intron |
| ATTTCCAGTCAGGTATACGG+CGG | 0.705719 | 7.4:-16576167 | MS.gene072346:intron |
| TGCCGTTTACGACATAACAG+TGG | 0.715538 | 7.4:-16574358 | MS.gene072346:CDS |
| CAGATGAAGCTGTTGCTCAG+TGG | 0.717060 | 7.4:-16573809 | MS.gene072346:CDS |
| TTTGTACAGAAGGATCAACC+GGG | 0.728556 | 7.4:-16577787 | MS.gene072346:CDS |
| GTACAGAAGGATCAACCGGG+TGG | 0.763265 | 7.4:-16577784 | MS.gene072346:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACATCTAAATAAAAA+AGG | + | chr7.4:16578271-16578290 | None:intergenic | 10.0% |
| !! | AAAAACATCTAAATAAAAAA+GGG | + | chr7.4:16578270-16578289 | None:intergenic | 10.0% |
| !! | AAGTGCAAATAATAATAAAA+AGG | + | chr7.4:16573988-16574007 | None:intergenic | 15.0% |
| !! | AATAATAATAAAAAGGATTC+CGG | + | chr7.4:16573981-16574000 | None:intergenic | 15.0% |
| !! | CAAAACAATAACAAATAAAT+AGG | + | chr7.4:16578240-16578259 | None:intergenic | 15.0% |
| !! | TAATTTGATATTATCATAAC+AGG | - | chr7.4:16574601-16574620 | MS.gene072346:intron | 15.0% |
| !! | TAGATTATAATCACATATTA+GGG | + | chr7.4:16576711-16576730 | None:intergenic | 15.0% |
| !! | TTATTAACTATGTATTATTC+TGG | - | chr7.4:16575127-16575146 | MS.gene072346:intron | 15.0% |
| !!! | AATTAAAGTATTATAACCTA+TGG | - | chr7.4:16576494-16576513 | MS.gene072346:intron | 15.0% |
| !!! | ATAAGTGATGTATTTTTATA+CGG | - | chr7.4:16577604-16577623 | MS.gene072346:intron | 15.0% |
| !!! | ATCTAGTGAATTTTTTATTT+TGG | - | chr7.4:16575035-16575054 | MS.gene072346:intron | 15.0% |
| !!! | CAATTATTTTCATCAATATT+TGG | - | chr7.4:16575211-16575230 | MS.gene072346:intron | 15.0% |
| !!! | GTTTCTTTTTTAATTAACTT+TGG | + | chr7.4:16576629-16576648 | None:intergenic | 15.0% |
| !!! | TAAACAAATTCTAATTTTTC+CGG | - | chr7.4:16573959-16573978 | MS.gene072346:intron | 15.0% |
| !!! | TACTGATTTTTTATTCTTAT+GGG | - | chr7.4:16575346-16575365 | MS.gene072346:intron | 15.0% |
| !!! | TATATTTATTGTTCAACTTT+TGG | - | chr7.4:16573490-16573509 | MS.gene072346:CDS | 15.0% |
| !!! | TTACTGATTTTTTATTCTTA+TGG | - | chr7.4:16575345-16575364 | MS.gene072346:intron | 15.0% |
| !!! | TTTTTTAATTAACTTTGGTT+GGG | + | chr7.4:16576624-16576643 | None:intergenic | 15.0% |
| !! | AAAAAATTCACTAGATACAA+CGG | + | chr7.4:16575031-16575050 | None:intergenic | 20.0% |
| !! | AATAAGATATCTTTCAATAC+AGG | + | chr7.4:16577118-16577137 | None:intergenic | 20.0% |
| !! | ATAAGTTGTTTATCAAAACA+AGG | - | chr7.4:16573723-16573742 | MS.gene072346:intron | 20.0% |
| !! | ATAATGTAATTGTTCGTAAA+TGG | - | chr7.4:16576814-16576833 | MS.gene072346:intron | 20.0% |
| !! | ATTGCTATCCATATTAAAAA+TGG | + | chr7.4:16577042-16577061 | None:intergenic | 20.0% |
| !! | CAATACTAACATATTTAGAT+TGG | + | chr7.4:16575815-16575834 | None:intergenic | 20.0% |
| !! | CTAGATTATAATCACATATT+AGG | + | chr7.4:16576712-16576731 | None:intergenic | 20.0% |
| !! | CTTATTTATTGGATCATAAT+AGG | - | chr7.4:16577152-16577171 | MS.gene072346:intron | 20.0% |
| !! | CTTCTCTTAACTATTAATTA+TGG | - | chr7.4:16577938-16577957 | MS.gene072346:intron | 20.0% |
| !! | GAAAAATTCAAAATAGAATC+TGG | + | chr7.4:16574400-16574419 | None:intergenic | 20.0% |
| !! | GATTAATCTTATCTTTCATT+TGG | - | chr7.4:16574182-16574201 | MS.gene072346:intron | 20.0% |
| !! | TAAATATGTTAGTATTGCTA+CGG | - | chr7.4:16575818-16575837 | MS.gene072346:intron | 20.0% |
| !! | TCTAACTTGAAGTTAAAAAT+TGG | - | chr7.4:16573575-16573594 | MS.gene072346:intron | 20.0% |
| !! | TTAAATGATATATAAGCTAC+TGG | + | chr7.4:16574572-16574591 | None:intergenic | 20.0% |
| !! | TTAACCTCTAAATCAATATT+GGG | + | chr7.4:16573520-16573539 | None:intergenic | 20.0% |
| !! | TTTAACCTCTAAATCAATAT+TGG | + | chr7.4:16573521-16573540 | None:intergenic | 20.0% |
| !!! | CTTTTTTAATTAACTTTGGT+TGG | + | chr7.4:16576625-16576644 | None:intergenic | 20.0% |
| !!! | GATTCTATTTTGAATTTTTC+AGG | - | chr7.4:16574400-16574419 | MS.gene072346:CDS | 20.0% |
| !!! | TCACATTTCTTCTTATTTAT+TGG | - | chr7.4:16577141-16577160 | MS.gene072346:intron | 20.0% |
| !!! | TCAGTTGAATTTGATTTTTT+GGG | - | chr7.4:16575978-16575997 | MS.gene072346:intron | 20.0% |
| !!! | TCTTTTTTTTATCTTGTCTT+AGG | - | chr7.4:16573809-16573828 | MS.gene072346:CDS | 20.0% |
| !!! | TTCAGTTGAATTTGATTTTT+TGG | - | chr7.4:16575977-16575996 | MS.gene072346:intron | 20.0% |
| !!! | TTTTAATATGGATAGCAATT+AGG | - | chr7.4:16577043-16577062 | MS.gene072346:intron | 20.0% |
| ! | AATGTAGTGATTTCAAAATG+AGG | + | chr7.4:16577670-16577689 | None:intergenic | 25.0% |
| ! | ACATATTTAGATTGGAACAA+TGG | + | chr7.4:16575807-16575826 | None:intergenic | 25.0% |
| ! | ATAAAGACACTAACATACAT+AGG | - | chr7.4:16575935-16575954 | MS.gene072346:intron | 25.0% |
| ! | ATGTAGTGATTTCAAAATGA+GGG | + | chr7.4:16577669-16577688 | None:intergenic | 25.0% |
| ! | ATTTCAGATTTGAATCAGTT+GGG | + | chr7.4:16573352-16573371 | None:intergenic | 25.0% |
| ! | CAAAGTAACAAAATCTGTAA+GGG | - | chr7.4:16576552-16576571 | MS.gene072346:intron | 25.0% |
| ! | GCAAGAAGAAAAAAATAAAG+AGG | + | chr7.4:16574310-16574329 | None:intergenic | 25.0% |
| ! | GGCTATTGTATAATAAGTTT+CGG | - | chr7.4:16574655-16574674 | MS.gene072346:intron | 25.0% |
| ! | TAAAGAGTTAAGACATATCA+AGG | + | chr7.4:16578212-16578231 | None:intergenic | 25.0% |
| ! | TACGAACAATTACATTATTC+AGG | + | chr7.4:16576812-16576831 | None:intergenic | 25.0% |
| ! | TAGCAGTTTATTTGTTCATT+TGG | - | chr7.4:16574160-16574179 | MS.gene072346:intron | 25.0% |
| ! | TAGTAAACATGTATATCATC+AGG | + | chr7.4:16573434-16573453 | None:intergenic | 25.0% |
| ! | TATGTGATTATAATCTAGCA+AGG | - | chr7.4:16576714-16576733 | MS.gene072346:intron | 25.0% |
| ! | TATTATCATAACAGGACAAA+AGG | - | chr7.4:16574609-16574628 | MS.gene072346:intron | 25.0% |
| ! | TGATAGAAACAAAGTATGTT+TGG | + | chr7.4:16573240-16573259 | None:intergenic | 25.0% |
| ! | TTACAGTTCTATAGTTATAC+TGG | + | chr7.4:16575166-16575185 | None:intergenic | 25.0% |
| ! | TTATCAAAACAAGGCTTAAT+TGG | - | chr7.4:16573732-16573751 | MS.gene072346:intron | 25.0% |
| !! | CAACTTATCTAGTGAAATTT+TGG | - | chr7.4:16575060-16575079 | MS.gene072346:intron | 25.0% |
| !! | TTATAATCTAGCAAGGTTTT+TGG | - | chr7.4:16576721-16576740 | MS.gene072346:intron | 25.0% |
| !!! | ACTCTTTTTTCTTTTTTCAG+GGG | - | chr7.4:16577237-16577256 | MS.gene072346:CDS | 25.0% |
| !!! | CACTCTTTTTTCTTTTTTCA+GGG | - | chr7.4:16577236-16577255 | MS.gene072346:CDS | 25.0% |
| !!! | CAGTTGAATTTGATTTTTTG+GGG | - | chr7.4:16575979-16575998 | MS.gene072346:intron | 25.0% |
| !!! | TAATGATTTTCTAGGAAAGA+TGG | + | chr7.4:16574076-16574095 | None:intergenic | 25.0% |
| !!! | TACCATTTTTTTTTTACCTC+CGG | - | chr7.4:16578080-16578099 | MS.gene072346:intron | 25.0% |
| !!! | TCACTCTTTTTTCTTTTTTC+AGG | - | chr7.4:16577235-16577254 | MS.gene072346:CDS | 25.0% |
| AAATAGGTTACAGACAAGTT+TGG | - | chr7.4:16576892-16576911 | MS.gene072346:CDS | 30.0% | |
| AATAGGTTACAGACAAGTTT+GGG | - | chr7.4:16576893-16576912 | MS.gene072346:CDS | 30.0% | |
| ACAGGAAATACAGAAAACAT+CGG | + | chr7.4:16577100-16577119 | None:intergenic | 30.0% | |
| ACATGTTTACTAGACTGTTT+GGG | - | chr7.4:16573442-16573461 | MS.gene072346:intron | 30.0% | |
| ACTTCTTTACTCTTATGTGT+GGG | - | chr7.4:16574634-16574653 | MS.gene072346:intron | 30.0% | |
| ATCACAGAAGTGATATTGAT+TGG | - | chr7.4:16574449-16574468 | MS.gene072346:intron | 30.0% | |
| CAAGTTTGGGTATATTTGAT+TGG | - | chr7.4:16576906-16576925 | MS.gene072346:intron | 30.0% | |
| CCAAAGTAACAAAATCTGTA+AGG | - | chr7.4:16576551-16576570 | MS.gene072346:intron | 30.0% | |
| GAATCGCAGATAAATAACAT+TGG | + | chr7.4:16574711-16574730 | None:intergenic | 30.0% | |
| GATGTGATCTCATATGTTAT+GGG | - | chr7.4:16576295-16576314 | MS.gene072346:intron | 30.0% | |
| GATTTCAGATTTGAATCAGT+TGG | + | chr7.4:16573353-16573372 | None:intergenic | 30.0% | |
| GGCAATCAATATACAAGAAA+AGG | + | chr7.4:16574379-16574398 | None:intergenic | 30.0% | |
| GTATTTCAAAGATACAGTAC+AGG | + | chr7.4:16575699-16575718 | None:intergenic | 30.0% | |
| TAACAAAATCTGTAAGGGAT+AGG | - | chr7.4:16576557-16576576 | MS.gene072346:intron | 30.0% | |
| TAACCTATGGTACATGAATA+AGG | - | chr7.4:16576507-16576526 | MS.gene072346:intron | 30.0% | |
| TACATGTTTACTAGACTGTT+TGG | - | chr7.4:16573441-16573460 | MS.gene072346:intron | 30.0% | |
| TATATTTCCAGTCAGGTATA+CGG | - | chr7.4:16575486-16575505 | MS.gene072346:intron | 30.0% | |
| TCATCATTATATTTCCAGTC+AGG | - | chr7.4:16575479-16575498 | MS.gene072346:intron | 30.0% | |
| TGCTATTAGCTACAAAAGAT+AGG | + | chr7.4:16573687-16573706 | None:intergenic | 30.0% | |
| TGTCTGTACCTGATAAAATA+CGG | + | chr7.4:16577450-16577469 | None:intergenic | 30.0% | |
| TTGCGTTGAAAAAGTGAAAA+AGG | + | chr7.4:16574521-16574540 | None:intergenic | 30.0% | |
| ! | AACTTGTTTGGCTTATTGAT+TGG | - | chr7.4:16573916-16573935 | MS.gene072346:intron | 30.0% |
| ! | AATTCAGATTGGTTATCTTG+TGG | - | chr7.4:16575864-16575883 | MS.gene072346:intron | 30.0% |
| ! | AGCATTTTTCCTAAGGTTTA+AGG | - | chr7.4:16577010-16577029 | MS.gene072346:intron | 30.0% |
| ! | AGTCTTGATTTTATTCTCAC+AGG | - | chr7.4:16578457-16578476 | MS.gene072346:intron | 30.0% |
| ! | ATCTTTCATTTGGAACTTTC+TGG | - | chr7.4:16574192-16574211 | MS.gene072346:intron | 30.0% |
| ! | CTTTTGTTAACCTATGCATT+TGG | - | chr7.4:16574267-16574286 | MS.gene072346:intron | 30.0% |
| ! | GATCTGATTTTCATTCACTT+GGG | + | chr7.4:16576770-16576789 | None:intergenic | 30.0% |
| ! | GCAAACTAAAAGTAAGTTGA+AGG | + | chr7.4:16573653-16573672 | None:intergenic | 30.0% |
| ! | TTATACTTCACCTTAGTTCT+AGG | + | chr7.4:16575647-16575666 | None:intergenic | 30.0% |
| ! | TTGTTTGTCATTTATAGCCT+CGG | + | chr7.4:16578543-16578562 | None:intergenic | 30.0% |
| ! | TTTCAATGTGTTTTCATCCT+TGG | + | chr7.4:16575318-16575337 | None:intergenic | 30.0% |
| !! | AACACCCAATATTGATTTAG+AGG | - | chr7.4:16573513-16573532 | MS.gene072346:CDS | 30.0% |
| !! | CCTTACAGATTTTGTTACTT+TGG | + | chr7.4:16576554-16576573 | None:intergenic | 30.0% |
| !! | GTACTGTATCTTTGAAATAC+TGG | - | chr7.4:16575699-16575718 | MS.gene072346:intron | 30.0% |
| !! | TGCATTTTCAACTTTTGGTT+TGG | - | chr7.4:16578412-16578431 | MS.gene072346:intron | 30.0% |
| !! | TTCTTTCAGGTTTGTTTCTT+TGG | - | chr7.4:16573182-16573201 | MS.gene072346:CDS | 30.0% |
| !!! | AATGAAATGTTTTGAGTTCG+AGG | - | chr7.4:16575909-16575928 | MS.gene072346:intron | 30.0% |
| !!! | ACCATTTTTTTTTTACCTCC+GGG | - | chr7.4:16578081-16578100 | MS.gene072346:intron | 30.0% |
| !!! | GGCTAGTTTTAATGCTAATT+AGG | + | chr7.4:16576599-16576618 | None:intergenic | 30.0% |
| !!! | GGGTACATGTTTAACTTTTT+TGG | - | chr7.4:16575999-16576018 | MS.gene072346:intron | 30.0% |
| !!! | GGTTGTTGCCATTTTTAATA+TGG | - | chr7.4:16577031-16577050 | MS.gene072346:intron | 30.0% |
| AAAGAAATTAACGATGAGGC+CGG | + | chr7.4:16573168-16573187 | None:intergenic | 35.0% | |
| AATGTACACTCTGCAGTTTA+GGG | - | chr7.4:16574907-16574926 | MS.gene072346:intron | 35.0% | |
| ACTGGGTAAAGATCTAATTG+AGG | + | chr7.4:16573391-16573410 | None:intergenic | 35.0% | |
| ACTTTGTAGCAGTTTCAGAT+GGG | - | chr7.4:16576848-16576867 | MS.gene072346:intron | 35.0% | |
| AGTATTTCAAAGCAAGTCAC+AGG | + | chr7.4:16577216-16577235 | None:intergenic | 35.0% | |
| AGTTCAAATAAGCGCATAAC+TGG | + | chr7.4:16573409-16573428 | None:intergenic | 35.0% | |
| ATACAGTACAGGAAGAAGTA+AGG | + | chr7.4:16575688-16575707 | None:intergenic | 35.0% | |
| ATAGCAATGAAGACCATTGT+AGG | + | chr7.4:16578376-16578395 | None:intergenic | 35.0% | |
| ATTTGAATCAGTTGGGTAGT+GGG | + | chr7.4:16573345-16573364 | None:intergenic | 35.0% | |
| ATTTGTACAGAAGGATCAAC+CGG | - | chr7.4:16573868-16573887 | MS.gene072346:intron | 35.0% | |
| CACTTCTTTACTCTTATGTG+TGG | - | chr7.4:16574633-16574652 | MS.gene072346:intron | 35.0% | |
| CAGTAGATGCTAACATTGAA+TGG | + | chr7.4:16575742-16575761 | None:intergenic | 35.0% | |
| CATTAAAGAACTTCATGCAG+AGG | + | chr7.4:16577901-16577920 | None:intergenic | 35.0% | |
| CCATCAAACTAAAAGTTTCG+CGG | + | chr7.4:16574241-16574260 | None:intergenic | 35.0% | |
| CCTCATCGTTAATTTCTTTC+AGG | - | chr7.4:16573169-16573188 | MS.gene072346:CDS | 35.0% | |
| CCTGAAAGAAATTAACGATG+AGG | + | chr7.4:16573172-16573191 | None:intergenic | 35.0% | |
| CTAGGAATCAAAACGTTTCT+AGG | + | chr7.4:16575629-16575648 | None:intergenic | 35.0% | |
| CTATGGTACATGAATAAGGA+AGG | - | chr7.4:16576511-16576530 | MS.gene072346:intron | 35.0% | |
| CTTCCTTATTCATGTACCAT+AGG | + | chr7.4:16576513-16576532 | None:intergenic | 35.0% | |
| CTTCTACATATGCAGGTAAT+TGG | - | chr7.4:16575245-16575264 | MS.gene072346:intron | 35.0% | |
| GCTAAAGGGTAAATTCAGAT+TGG | - | chr7.4:16575853-16575872 | MS.gene072346:intron | 35.0% | |
| GGATGTGATCTCATATGTTA+TGG | - | chr7.4:16576294-16576313 | MS.gene072346:intron | 35.0% | |
| GTCTGTACCTGATAAAATAC+GGG | + | chr7.4:16577449-16577468 | None:intergenic | 35.0% | |
| GTGGTGTAGAGATATATTTG+TGG | - | chr7.4:16577866-16577885 | MS.gene072346:intron | 35.0% | |
| GTTCAAATAAGCGCATAACT+GGG | + | chr7.4:16573408-16573427 | None:intergenic | 35.0% | |
| TACTTTGTAGCAGTTTCAGA+TGG | - | chr7.4:16576847-16576866 | MS.gene072346:intron | 35.0% | |
| TAGAGATATATTTGTGGCCA+AGG | - | chr7.4:16577872-16577891 | MS.gene072346:intron | 35.0% | |
| TCATAAGAGATACATGCTTG+TGG | - | chr7.4:16575375-16575394 | MS.gene072346:intron | 35.0% | |
| TCATTGCTATCATCATGGAA+GGG | - | chr7.4:16578386-16578405 | MS.gene072346:intron | 35.0% | |
| TGATCCATCAATTTCATGTG+TGG | - | chr7.4:16578298-16578317 | MS.gene072346:intron | 35.0% | |
| TGTCAAATTATTAGCTGCTC+AGG | - | chr7.4:16575574-16575593 | MS.gene072346:intron | 35.0% | |
| TGTCGAAGAATTTGTACAGA+AGG | - | chr7.4:16573859-16573878 | MS.gene072346:intron | 35.0% | |
| TGTCTGCTAGCAATTATATC+AGG | - | chr7.4:16577176-16577195 | MS.gene072346:intron | 35.0% | |
| TTAATTAACTTTGGTTGGGC+TGG | + | chr7.4:16576620-16576639 | None:intergenic | 35.0% | |
| TTATTGTTGCGTAGCTGTTA+TGG | - | chr7.4:16576249-16576268 | MS.gene072346:intron | 35.0% | |
| TTCATTGCTATCATCATGGA+AGG | - | chr7.4:16578385-16578404 | MS.gene072346:intron | 35.0% | |
| TTGCTAACTTCTACATATGC+AGG | - | chr7.4:16575238-16575257 | MS.gene072346:intron | 35.0% | |
| TTGGAAGTTACATGTAACAC+TGG | - | chr7.4:16575098-16575117 | MS.gene072346:intron | 35.0% | |
| TTTCGTACATCTCGTGTAAT+CGG | - | chr7.4:16576142-16576161 | MS.gene072346:CDS | 35.0% | |
| TTTGTGATGCTTGCATCATA+AGG | - | chr7.4:16576217-16576236 | MS.gene072346:intron | 35.0% | |
| ! | AAATCTGAAATCACCCAAGT+GGG | - | chr7.4:16573361-16573380 | MS.gene072346:intron | 35.0% |
| ! | ATCAAAACGTTTCTAGGAAC+AGG | + | chr7.4:16575623-16575642 | None:intergenic | 35.0% |
| ! | ATGATTTCCCTCTTCCATTT+TGG | - | chr7.4:16575516-16575535 | MS.gene072346:intron | 35.0% |
| ! | CGATCTGATTTTCATTCACT+TGG | + | chr7.4:16576771-16576790 | None:intergenic | 35.0% |
| ! | GTCTTCAAGCATTTTTCCTA+AGG | - | chr7.4:16577003-16577022 | MS.gene072346:intron | 35.0% |
| ! | GTTTTCTGAGTATCTTTTCC+TGG | - | chr7.4:16575280-16575299 | MS.gene072346:intron | 35.0% |
| ! | TAACTCAATTTTACCACCAC+AGG | - | chr7.4:16577779-16577798 | MS.gene072346:CDS | 35.0% |
| ! | TGTTTGGCTTATTGATTGGT+GGG | - | chr7.4:16573920-16573939 | MS.gene072346:intron | 35.0% |
| ! | TGTTTGTCATTTATAGCCTC+GGG | + | chr7.4:16578542-16578561 | None:intergenic | 35.0% |
| ! | TTGTTTGGCTTATTGATTGG+TGG | - | chr7.4:16573919-16573938 | MS.gene072346:intron | 35.0% |
| !! | AATATCTAAGGCGTTGAAGA+AGG | + | chr7.4:16577724-16577743 | None:intergenic | 35.0% |
| !! | AATCTAGCAAGGTTTTTGGA+AGG | - | chr7.4:16576725-16576744 | MS.gene072346:intron | 35.0% |
| !! | AGTGATATTGATTGGCTTGT+TGG | - | chr7.4:16574457-16574476 | MS.gene072346:intron | 35.0% |
| !! | ATATTGATTGGCTTGTTGGA+TGG | - | chr7.4:16574461-16574480 | MS.gene072346:intron | 35.0% |
| !! | ATTCAGTCCTGAAGGTATTT+AGG | + | chr7.4:16576653-16576672 | None:intergenic | 35.0% |
| !! | GCTCAGGTGATTGTTTTATT+TGG | - | chr7.4:16574490-16574509 | MS.gene072346:intron | 35.0% |
| !! | TATTGATTGGCTTGTTGGAT+GGG | - | chr7.4:16574462-16574481 | MS.gene072346:intron | 35.0% |
| !! | TGCTTCTGAAATGTACATGT+GGG | - | chr7.4:16576272-16576291 | MS.gene072346:intron | 35.0% |
| !! | TTCAGTCCTGAAGGTATTTA+GGG | + | chr7.4:16576652-16576671 | None:intergenic | 35.0% |
| !! | TTTGATGAAGAGTTCTGGAA+AGG | - | chr7.4:16576318-16576337 | MS.gene072346:intron | 35.0% |
| !!! | CCATTTTTTTTTTACCTCCG+GGG | - | chr7.4:16578082-16578101 | MS.gene072346:intron | 35.0% |
| !!! | CGCGAAACTTTTAGTTTGAT+GGG | - | chr7.4:16574239-16574258 | MS.gene072346:intron | 35.0% |
| !!! | CGTTTTGATTCCTAGAACTA+AGG | - | chr7.4:16575634-16575653 | MS.gene072346:intron | 35.0% |
| !!! | CTTTTTTCAGGGGTTTGTTT+CGG | - | chr7.4:16577247-16577266 | MS.gene072346:intron | 35.0% |
| !!! | GAAAGCGCTAATGATTTTCT+AGG | + | chr7.4:16574084-16574103 | None:intergenic | 35.0% |
| !!! | TGCTTGTGTGTTAGTCTTTT+GGG | - | chr7.4:16574327-16574346 | MS.gene072346:CDS | 35.0% |
| !!! | TTGCTTGTGTGTTAGTCTTT+TGG | - | chr7.4:16574326-16574345 | MS.gene072346:CDS | 35.0% |
| AAACGAAGATTCAGTCCTGA+AGG | + | chr7.4:16576661-16576680 | None:intergenic | 40.0% | |
| AACATGATCAAACAGCGTTC+AGG | - | chr7.4:16574750-16574769 | MS.gene072346:intron | 40.0% | |
| AATAGTCCCACACAAGTTCA+TGG | + | chr7.4:16576974-16576993 | None:intergenic | 40.0% | |
| ACAAAGAGAGCCAACCAAAA+TGG | + | chr7.4:16575533-16575552 | None:intergenic | 40.0% | |
| ACAATGCTAAGGCTCTTACA+GGG | - | chr7.4:16577347-16577366 | MS.gene072346:intron | 40.0% | |
| ACATCGGAGAGACAAAACAA+TGG | + | chr7.4:16577084-16577103 | None:intergenic | 40.0% | |
| AGAAACCCCTAAATACCTTC+AGG | - | chr7.4:16576643-16576662 | MS.gene072346:intron | 40.0% | |
| AGCCACTGTTATGTCGTAAA+CGG | + | chr7.4:16577303-16577322 | None:intergenic | 40.0% | |
| AGTCACAGGAAAGAACAATC+AGG | + | chr7.4:16577202-16577221 | None:intergenic | 40.0% | |
| AGTCACAGTGAAGCATATAC+CGG | + | chr7.4:16574825-16574844 | None:intergenic | 40.0% | |
| ATAGTCCCACACAAGTTCAT+GGG | + | chr7.4:16576973-16576992 | None:intergenic | 40.0% | |
| ATCAATTTCATGTGTGGAGC+AGG | - | chr7.4:16578304-16578323 | MS.gene072346:intron | 40.0% | |
| ATGGGTTTGATGAAGAGTTC+TGG | - | chr7.4:16576313-16576332 | MS.gene072346:intron | 40.0% | |
| ATGTACACTCTGCAGTTTAG+GGG | - | chr7.4:16574908-16574927 | MS.gene072346:intron | 40.0% | |
| CCCCGGAGGTAAAAAAAAAA+TGG | + | chr7.4:16578085-16578104 | None:intergenic | 40.0% | |
| CTGTACAAATTCTTCGACAG+CGG | + | chr7.4:16573858-16573877 | None:intergenic | 40.0% | |
| CTTGTGGATAACACATCTGT+TGG | - | chr7.4:16575880-16575899 | MS.gene072346:intron | 40.0% | |
| CTTTGGATTCATCATCGACA+TGG | - | chr7.4:16573199-16573218 | MS.gene072346:CDS | 40.0% | |
| GAAATCGTCAAAGTTTCTGC+CGG | - | chr7.4:16574803-16574822 | MS.gene072346:intron | 40.0% | |
| GAATGTACACTCTGCAGTTT+AGG | - | chr7.4:16574906-16574925 | MS.gene072346:intron | 40.0% | |
| GATTTGAATCAGTTGGGTAG+TGG | + | chr7.4:16573346-16573365 | None:intergenic | 40.0% | |
| GCAACGATTCATAGAACTCT+AGG | - | chr7.4:16574034-16574053 | MS.gene072346:intron | 40.0% | |
| GCAGTGTTAAGTTCCTACAA+TGG | - | chr7.4:16578360-16578379 | MS.gene072346:intron | 40.0% | |
| GGTCTTCATTGCTATCATCA+TGG | - | chr7.4:16578381-16578400 | MS.gene072346:intron | 40.0% | |
| GTTACATGTAACTTCCAAGC+AGG | + | chr7.4:16575096-16575115 | None:intergenic | 40.0% | |
| GTTAGACAAACATGTAGCTG+AGG | - | chr7.4:16578119-16578138 | MS.gene072346:intron | 40.0% | |
| TAACCTATGCATTTGGCACT+GGG | - | chr7.4:16574274-16574293 | MS.gene072346:intron | 40.0% | |
| TAATTGAGGAGAACCCACTT+GGG | + | chr7.4:16573377-16573396 | None:intergenic | 40.0% | |
| TACAATGCTAAGGCTCTTAC+AGG | - | chr7.4:16577346-16577365 | MS.gene072346:intron | 40.0% | |
| TACATATGCAGGTAATTGGC+TGG | - | chr7.4:16575249-16575268 | MS.gene072346:intron | 40.0% | |
| TATCATTGCAGCACAACTGT+GGG | - | chr7.4:16576366-16576385 | MS.gene072346:CDS | 40.0% | |
| TATGTTAGTATTGCTACGGC+TGG | - | chr7.4:16575822-16575841 | MS.gene072346:intron | 40.0% | |
| TGCTCCACACATGAAATTGA+TGG | + | chr7.4:16578305-16578324 | None:intergenic | 40.0% | |
| TGCTTGCATCATAAGGTTTC+TGG | - | chr7.4:16576224-16576243 | MS.gene072346:intron | 40.0% | |
| TGGCAACAACCTTAAACCTT+AGG | + | chr7.4:16577022-16577041 | None:intergenic | 40.0% | |
| TGTAAGAGCCTTAGCATTGT+AGG | + | chr7.4:16577347-16577366 | None:intergenic | 40.0% | |
| TTAACCTATGCATTTGGCAC+TGG | - | chr7.4:16574273-16574292 | MS.gene072346:intron | 40.0% | |
| TTATCCATGCCTGATCTACA+TGG | + | chr7.4:16576417-16576436 | None:intergenic | 40.0% | |
| TTCACTTGGGATAAAATGCC+TGG | + | chr7.4:16576757-16576776 | None:intergenic | 40.0% | |
| TTGATATGAACTTGCACCTG+TGG | + | chr7.4:16577798-16577817 | None:intergenic | 40.0% | |
| TTGGTTGTAACTTACCTGCT+TGG | - | chr7.4:16575079-16575098 | MS.gene072346:intron | 40.0% | |
| TTTCAGATGGGTAGTTGCAA+GGG | - | chr7.4:16576860-16576879 | MS.gene072346:CDS | 40.0% | |
| TTTGTACAGAAGGATCAACC+GGG | - | chr7.4:16573869-16573888 | MS.gene072346:intron | 40.0% | |
| ! | ATCTTTTCCTGGAGAGAAGT+TGG | - | chr7.4:16575291-16575310 | MS.gene072346:intron | 40.0% |
| ! | CAAATCTGAAATCACCCAAG+TGG | - | chr7.4:16573360-16573379 | MS.gene072346:intron | 40.0% |
| ! | GGCGTTGCATTTTCAACTTT+TGG | - | chr7.4:16578407-16578426 | MS.gene072346:intron | 40.0% |
| ! | TCTTTTCCTGGAGAGAAGTT+GGG | - | chr7.4:16575292-16575311 | MS.gene072346:intron | 40.0% |
| ! | TTCTCTGCCCGTATTTTATC+AGG | - | chr7.4:16577439-16577458 | MS.gene072346:intron | 40.0% |
| !! | AGAGTTCTGGAAAGGAACAA+CGG | - | chr7.4:16576326-16576345 | MS.gene072346:intron | 40.0% |
| !! | AGTCTTTTGGGTAGGAAAAC+TGG | - | chr7.4:16574339-16574358 | MS.gene072346:CDS | 40.0% |
| !! | GCTTCTGAAATGTACATGTG+GGG | - | chr7.4:16576273-16576292 | MS.gene072346:intron | 40.0% |
| !! | GTGCTTCTGAAATGTACATG+TGG | - | chr7.4:16576271-16576290 | MS.gene072346:intron | 40.0% |
| !! | GTTTTTGGAAGGTTAAAGCC+AGG | - | chr7.4:16576736-16576755 | MS.gene072346:intron | 40.0% |
| !! | TCAGTCCTGAAGGTATTTAG+GGG | + | chr7.4:16576651-16576670 | None:intergenic | 40.0% |
| !! | TTTCCCTCTTCCATTTTGGT+TGG | - | chr7.4:16575520-16575539 | MS.gene072346:intron | 40.0% |
| !! | TTTGGTTTGGCAGTTGTTAC+TGG | - | chr7.4:16578425-16578444 | MS.gene072346:intron | 40.0% |
| !!! | CCGCGAAACTTTTAGTTTGA+TGG | - | chr7.4:16574238-16574257 | MS.gene072346:intron | 40.0% |
| !!! | GGTTGTTCCTCCTTGTTTTT+CGG | + | chr7.4:16578521-16578540 | None:intergenic | 40.0% |
| !!! | TGTGTGTTAGTCTTTTGGGT+AGG | - | chr7.4:16574331-16574350 | MS.gene072346:CDS | 40.0% |
| ACTGTTATGTCGTAAACGGC+AGG | + | chr7.4:16577299-16577318 | None:intergenic | 45.0% | |
| ACTTCATGCAGAGGTTACCT+TGG | + | chr7.4:16577892-16577911 | None:intergenic | 45.0% | |
| AGAGCCAACCAAAATGGAAG+AGG | + | chr7.4:16575527-16575546 | None:intergenic | 45.0% | |
| ATACTGGAAGCTATGCTGCA+TGG | - | chr7.4:16575715-16575734 | MS.gene072346:intron | 45.0% | |
| ATATGAACTTGCACCTGTGG+TGG | + | chr7.4:16577795-16577814 | None:intergenic | 45.0% | |
| ATTTCCAGTCAGGTATACGG+CGG | - | chr7.4:16575489-16575508 | MS.gene072346:intron | 45.0% | |
| CAATGCTAAGGCTCTTACAG+GGG | - | chr7.4:16577348-16577367 | MS.gene072346:intron | 45.0% | |
| CATATCTGCACTGTGTGTGT+GGG | + | chr7.4:16577542-16577561 | None:intergenic | 45.0% | |
| CATCTCGTGTAATCGGTTAC+TGG | - | chr7.4:16576149-16576168 | MS.gene072346:CDS | 45.0% | |
| CTAATTGAGGAGAACCCACT+TGG | + | chr7.4:16573378-16573397 | None:intergenic | 45.0% | |
| CTCTTCCCATGAACTTGTGT+GGG | - | chr7.4:16576965-16576984 | MS.gene072346:intron | 45.0% | |
| GAGCCAACCAAAATGGAAGA+GGG | + | chr7.4:16575526-16575545 | None:intergenic | 45.0% | |
| GCAACAGCTTCATCTGTTTC+TGG | + | chr7.4:16577843-16577862 | None:intergenic | 45.0% | |
| GCTCCAGGTCGAAATATACA+CGG | - | chr7.4:16574214-16574233 | MS.gene072346:intron | 45.0% | |
| GTATCATTGCAGCACAACTG+TGG | - | chr7.4:16576365-16576384 | MS.gene072346:CDS | 45.0% | |
| GTTTCAGATGGGTAGTTGCA+AGG | - | chr7.4:16576859-16576878 | MS.gene072346:CDS | 45.0% | |
| TCATATCTGCACTGTGTGTG+TGG | + | chr7.4:16577543-16577562 | None:intergenic | 45.0% | |
| TCGACCAATAAAGCCTCTTG+CGG | - | chr7.4:16578176-16578195 | MS.gene072346:intron | 45.0% | |
| TCTCTTCCCATGAACTTGTG+TGG | - | chr7.4:16576964-16576983 | MS.gene072346:intron | 45.0% | |
| TGCAAAGCCGAAAAACAAGG+AGG | - | chr7.4:16578511-16578530 | MS.gene072346:CDS | 45.0% | |
| TGTGGGAAAGACTACAGTCA+AGG | - | chr7.4:16576383-16576402 | MS.gene072346:CDS | 45.0% | |
| TTCAGATGGGTAGTTGCAAG+GGG | - | chr7.4:16576861-16576880 | MS.gene072346:CDS | 45.0% | |
| TTTCAGTGATCAAGAGCTGC+AGG | - | chr7.4:16578146-16578165 | MS.gene072346:intron | 45.0% | |
| ! | AAAGGAACAACGGGCTTTGA+TGG | - | chr7.4:16576336-16576355 | MS.gene072346:intron | 45.0% |
| ! | AAGGAACAACGGGCTTTGAT+GGG | - | chr7.4:16576337-16576356 | MS.gene072346:intron | 45.0% |
| ! | AGGTAATTGGCTGGTCAATG+TGG | - | chr7.4:16575258-16575277 | MS.gene072346:intron | 45.0% |
| ! | CTAACCGCAAGAGGCTTTAT+TGG | + | chr7.4:16578183-16578202 | None:intergenic | 45.0% |
| ! | GTTTTGCGTCCATGTAGATC+AGG | - | chr7.4:16576405-16576424 | MS.gene072346:intron | 45.0% |
| ! | TGCCGTTTACGACATAACAG+TGG | - | chr7.4:16577298-16577317 | MS.gene072346:intron | 45.0% |
| ! | TGGTTGGCTCTCTTTGTAGA+AGG | - | chr7.4:16575536-16575555 | MS.gene072346:intron | 45.0% |
| ! | TGTTGTGGCTGGAACTTGTT+TGG | - | chr7.4:16573904-16573923 | MS.gene072346:intron | 45.0% |
| !! | AGGAAGTATCTAACCGCAAG+AGG | + | chr7.4:16578192-16578211 | None:intergenic | 45.0% |
| !! | AGGCGTTGAAGAAGGAAGAT+TGG | + | chr7.4:16577716-16577735 | None:intergenic | 45.0% |
| !! | ATTTGGAACTTTCTGGCTCC+AGG | - | chr7.4:16574199-16574218 | MS.gene072346:intron | 45.0% |
| !! | CTTGTTTTTCGGCTTTGCAG+GGG | + | chr7.4:16578510-16578529 | None:intergenic | 45.0% |
| !! | GAGTTCTGGAAAGGAACAAC+GGG | - | chr7.4:16576327-16576346 | MS.gene072346:intron | 45.0% |
| !!! | CCTTGTTTTTCGGCTTTGCA+GGG | + | chr7.4:16578511-16578530 | None:intergenic | 45.0% |
| !!! | TCCTTGTTTTTCGGCTTTGC+AGG | + | chr7.4:16578512-16578531 | None:intergenic | 45.0% |
| !!! | TGTTGGATGGGTTTTAGCTC+AGG | - | chr7.4:16574474-16574493 | MS.gene072346:intron | 45.0% |
| !! | GAAATAAATAAATAAATAAA+AGG | + | chr7.4:16576094-16576113 | None:intergenic | 5.0% |
| !! | TATATAAATAAAAATATCTA+AGG | + | chr7.4:16577736-16577755 | None:intergenic | 5.0% |
| !! | TTATAATACTTTAATTATTT+AGG | + | chr7.4:16576490-16576509 | None:intergenic | 5.0% |
| AAACAAGGAGGAACAACCCG+AGG | - | chr7.4:16578523-16578542 | MS.gene072346:CDS | 50.0% | |
| AACAATGCATCCTGATGCCC+CGG | + | chr7.4:16578102-16578121 | None:intergenic | 50.0% | |
| AGCCTTAGCATTGTAGGAGC+AGG | + | chr7.4:16577341-16577360 | None:intergenic | 50.0% | |
| AGCTCTATCTTGGGGCTTTG+TGG | - | chr7.4:16578328-16578347 | MS.gene072346:intron | 50.0% | |
| AGTATTGCTACGGCTGGCAA+GGG | - | chr7.4:16575828-16575847 | MS.gene072346:intron | 50.0% | |
| CACCTGCTCCTACAATGCTA+AGG | - | chr7.4:16577336-16577355 | MS.gene072346:intron | 50.0% | |
| CAGATGAAGCTGTTGCTCAG+TGG | - | chr7.4:16577847-16577866 | MS.gene072346:intron | 50.0% | |
| CAGGAATATGCAACCTCCAC+TGG | - | chr7.4:16575593-16575612 | MS.gene072346:intron | 50.0% | |
| CCCTCCCTGCAGCAAAAAAT+GGG | + | chr7.4:16576033-16576052 | None:intergenic | 50.0% | |
| CCCTGCAAAGCCGAAAAACA+AGG | - | chr7.4:16578508-16578527 | MS.gene072346:CDS | 50.0% | |
| CCCTGCAGCAAAAAATGGGA+GGG | + | chr7.4:16576029-16576048 | None:intergenic | 50.0% | |
| CTTACAGGGGAAACGTTCAG+TGG | - | chr7.4:16577361-16577380 | MS.gene072346:intron | 50.0% | |
| GGTCCGTGTATATTTCGACC+TGG | + | chr7.4:16574220-16574239 | None:intergenic | 50.0% | |
| GTAGGAGCAGGTGAACTCTT+GGG | + | chr7.4:16577329-16577348 | None:intergenic | 50.0% | |
| TAGGAGCAGGTGAACTCTTG+GGG | + | chr7.4:16577328-16577347 | None:intergenic | 50.0% | |
| TAGTATTGCTACGGCTGGCA+AGG | - | chr7.4:16575827-16575846 | MS.gene072346:intron | 50.0% | |
| TCCCTGCAGCAAAAAATGGG+AGG | + | chr7.4:16576030-16576049 | None:intergenic | 50.0% | |
| TCTAGGAACAGGCAATCCAG+TGG | + | chr7.4:16575612-16575631 | None:intergenic | 50.0% | |
| TGTAGGAGCAGGTGAACTCT+TGG | + | chr7.4:16577330-16577349 | None:intergenic | 50.0% | |
| ! | GAGCAGGTAGCTCTATCTTG+GGG | - | chr7.4:16578320-16578339 | MS.gene072346:intron | 50.0% |
| ! | GCAAGGGGCTTGGTAGAAAT+AGG | - | chr7.4:16576876-16576895 | MS.gene072346:CDS | 50.0% |
| ! | GGAGCAGGTAGCTCTATCTT+GGG | - | chr7.4:16578319-16578338 | MS.gene072346:intron | 50.0% |
| ! | TGGAGCAGGTAGCTCTATCT+TGG | - | chr7.4:16578318-16578337 | MS.gene072346:intron | 50.0% |
| ! | TGGCTTATTGATTGGTGGGC+TGG | - | chr7.4:16573924-16573943 | MS.gene072346:intron | 50.0% |
| !! | AAACAGCGTTCAGGTTGCCT+TGG | - | chr7.4:16574759-16574778 | MS.gene072346:intron | 50.0% |
| !! | TCACTGCTAGAGTACTGCCA+AGG | + | chr7.4:16574779-16574798 | None:intergenic | 50.0% |
| !! | TGATTGGTGGGCTGGAGTTA+AGG | - | chr7.4:16573932-16573951 | MS.gene072346:intron | 50.0% |
| !!! | CCATTTTTTGCTGCAGGGAG+GGG | - | chr7.4:16576031-16576050 | MS.gene072346:CDS | 50.0% |
| !!! | CCCATTTTTTGCTGCAGGGA+GGG | - | chr7.4:16576030-16576049 | MS.gene072346:CDS | 50.0% |
| !!! | CCCTCCCATTTTTTGCTGCA+GGG | - | chr7.4:16576026-16576045 | MS.gene072346:CDS | 50.0% |
| !!! | TCCCATTTTTTGCTGCAGGG+AGG | - | chr7.4:16576029-16576048 | MS.gene072346:CDS | 50.0% |
| !!! | TCCCTCCCATTTTTTGCTGC+AGG | - | chr7.4:16576025-16576044 | MS.gene072346:CDS | 50.0% |
| !!! | TTTTTTACCTCCGGGGCATC+AGG | - | chr7.4:16578089-16578108 | MS.gene072346:intron | 50.0% |
| ACAACAGTTCTGCCACCACC+CGG | + | chr7.4:16573890-16573909 | None:intergenic | 55.0% | |
| AGGAACAGGCAATCCAGTGG+AGG | + | chr7.4:16575609-16575628 | None:intergenic | 55.0% | |
| ATGGGTAGTTGCAAGGGGCT+TGG | - | chr7.4:16576866-16576885 | MS.gene072346:CDS | 55.0% | |
| CCCCTCCCTGCAGCAAAAAA+TGG | + | chr7.4:16576034-16576053 | None:intergenic | 55.0% | |
| GCACCCAGTGCCAAATGCAT+AGG | + | chr7.4:16574280-16574299 | None:intergenic | 55.0% | |
| GCGTCCATGTAGATCAGGCA+TGG | - | chr7.4:16576410-16576429 | MS.gene072346:intron | 55.0% | |
| GCTGCTGTTGTGGTTCCACT+AGG | - | chr7.4:16573125-16573144 | MS.gene072346:CDS | 55.0% | |
| GGCTGGCAAGGGTAGCTAAA+GGG | - | chr7.4:16575839-16575858 | MS.gene072346:intron | 55.0% | |
| GTACAGAAGGATCAACCGGG+TGG | - | chr7.4:16573872-16573891 | MS.gene072346:intron | 55.0% | |
| TATTGCAGCGGCTGCTGTTG+TGG | - | chr7.4:16573115-16573134 | MS.gene072346:CDS | 55.0% | |
| TCAACCGCCGTATACCTGAC+TGG | + | chr7.4:16575496-16575515 | None:intergenic | 55.0% | |
| ! | ACAGGCAGAGCGTTCAAACC+CGG | - | chr7.4:16578475-16578494 | MS.gene072346:intron | 55.0% |
| ! | TGGGGCTTTGTGGTTGTTGC+AGG | - | chr7.4:16578338-16578357 | MS.gene072346:intron | 55.0% |
| !! | CAACGGGCTTTGATGGGTTG+AGG | - | chr7.4:16576343-16576362 | MS.gene072346:CDS | 55.0% |
| AATGCATCCTGATGCCCCGG+AGG | + | chr7.4:16578099-16578118 | None:intergenic | 60.0% | |
| CAGAAGGATCAACCGGGTGG+TGG | - | chr7.4:16573875-16573894 | MS.gene072346:intron | 60.0% | |
| CCTGGAGAGAAGTTGGGCCA+AGG | - | chr7.4:16575298-16575317 | MS.gene072346:intron | 60.0% | |
| CCTTGGCCCAACTTCTCTCC+AGG | + | chr7.4:16575301-16575320 | None:intergenic | 60.0% | |
| CGGCTGGCAAGGGTAGCTAA+AGG | - | chr7.4:16575838-16575857 | MS.gene072346:intron | 60.0% | |
| GCGAAGAAGAGCAGGCCTAG+TGG | + | chr7.4:16573143-16573162 | None:intergenic | 60.0% | |
| GGCCTGCTCTTCTTCGCTTC+CGG | - | chr7.4:16573146-16573165 | MS.gene072346:CDS | 60.0% | |
| GGTGGCAGAACTGTTGTGGC+TGG | - | chr7.4:16573893-16573912 | MS.gene072346:intron | 60.0% | |
| TTTGCAGGGGCTACCTTGGC+CGG | + | chr7.4:16578497-16578516 | None:intergenic | 60.0% | |
| ! | AGAGCGTTCAAACCCGGCCA+AGG | - | chr7.4:16578481-16578500 | MS.gene072346:intron | 60.0% |
| ! | GGGTGGTGGCAGAACTGTTG+TGG | - | chr7.4:16573889-16573908 | MS.gene072346:intron | 60.0% |
| CGGCTTTGCAGGGGCTACCT+TGG | + | chr7.4:16578501-16578520 | None:intergenic | 65.0% | |
| GGCCGGAAGCGAAGAAGAGC+AGG | + | chr7.4:16573151-16573170 | None:intergenic | 65.0% | |
| TGGGCGCACACGCATGGTGT+TGG | + | chr7.4:16577523-16577542 | None:intergenic | 65.0% | |
| TGTGTGTGGGCGCACACGCA+TGG | + | chr7.4:16577529-16577548 | None:intergenic | 65.0% | |
| TTGCAGGGGCTACCTTGGCC+GGG | + | chr7.4:16578496-16578515 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 16573110 | 16578568 | 16573110 | ID=MS.gene072346 |
| chr7.4 | mRNA | 16573110 | 16578568 | 16573110 | ID=MS.gene072346.t1;Parent=MS.gene072346 |
| chr7.4 | exon | 16578488 | 16578568 | 16578488 | ID=MS.gene072346.t1.exon1;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16578488 | 16578568 | 16578488 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16577725 | 16577847 | 16577725 | ID=MS.gene072346.t1.exon2;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16577725 | 16577847 | 16577725 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16577418 | 16577457 | 16577418 | ID=MS.gene072346.t1.exon3;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16577418 | 16577457 | 16577418 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16577183 | 16577256 | 16577183 | ID=MS.gene072346.t1.exon4;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16577183 | 16577256 | 16577183 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16576854 | 16576913 | 16576854 | ID=MS.gene072346.t1.exon5;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16576854 | 16576913 | 16576854 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16576341 | 16576418 | 16576341 | ID=MS.gene072346.t1.exon6;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16576341 | 16576418 | 16576341 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16576023 | 16576181 | 16576023 | ID=MS.gene072346.t1.exon7;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16576023 | 16576181 | 16576023 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16574296 | 16574421 | 16574296 | ID=MS.gene072346.t1.exon8;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16574296 | 16574421 | 16574296 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16573785 | 16573877 | 16573785 | ID=MS.gene072346.t1.exon9;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16573785 | 16573877 | 16573785 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16573481 | 16573567 | 16573481 | ID=MS.gene072346.t1.exon10;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16573481 | 16573567 | 16573481 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| chr7.4 | exon | 16573110 | 16573352 | 16573110 | ID=MS.gene072346.t1.exon11;Parent=MS.gene072346.t1 |
| chr7.4 | CDS | 16573110 | 16573352 | 16573110 | ID=cds.MS.gene072346.t1;Parent=MS.gene072346.t1 |
| Gene Sequence |
| Protein sequence |
