Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072541.t1 | XP_003626181.1 | 74.4 | 904 | 33 | 2 | 1 | 706 | 1 | 904 | 0.00E+00 | 1166.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072541.t1 | Q9SGH2 | 43.1 | 51 | 28 | 1 | 312 | 361 | 1284 | 1334 | 2.6e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072541.t1 | G7KWI7 | 74.4 | 904 | 33 | 2 | 1 | 706 | 1 | 904 | 0.0e+00 | 1166.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene072541.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050654 | MS.gene072541 | 0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene050737 | MS.gene072541 | 0.952035 | 5.75E-110 | -1.69E-46 |
| MS.gene050941 | MS.gene072541 | 0.906723 | 1.09E-80 | -1.69E-46 |
| MS.gene051541 | MS.gene072541 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene072541 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene072541 | 0.813875 | 2.05E-51 | -1.69E-46 |
| MS.gene059290 | MS.gene072541 | 0.8104 | 1.17E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene072541 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene072541 | 0.808352 | 3.23E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene072541 | 0.808979 | 2.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072541.t1 | MTR_7g112410 | 90.801 | 674 | 25 | 3 | 68 | 706 | 233 | 904 | 0.0 | 1246 |
| MS.gene072541.t1 | MTR_7g112410 | 88.889 | 108 | 9 | 1 | 1 | 108 | 1 | 105 | 1.31e-48 | 184 |
| MS.gene072541.t1 | MTR_7g112410 | 89.951 | 617 | 25 | 3 | 68 | 649 | 233 | 847 | 0.0 | 1123 |
| MS.gene072541.t1 | MTR_7g112410 | 88.889 | 108 | 9 | 1 | 1 | 108 | 1 | 105 | 9.57e-49 | 184 |
| MS.gene072541.t1 | MTR_4g110090 | 40.650 | 123 | 68 | 3 | 263 | 381 | 68 | 189 | 7.16e-22 | 100 |
| MS.gene072541.t1 | MTR_4g110090 | 42.424 | 99 | 55 | 1 | 596 | 694 | 513 | 609 | 1.02e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072541.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 3.70e-124 | 391 |
| MS.gene072541.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 3.70e-124 | 391 |
| MS.gene072541.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 3.70e-124 | 391 |
Find 189 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTATATGGCCTGGAATTT+TGG | 0.124200 | 7.3:-4056632 | MS.gene072541:CDS |
| CCTTGAATTGCTCATTCTTA+TGG | 0.185613 | 7.3:+4056705 | None:intergenic |
| TGAATAGCCCTGAAATTAAT+AGG | 0.209679 | 7.3:-4056843 | MS.gene072541:CDS |
| CTTGGTTCCCTATTAATTTC+AGG | 0.214253 | 7.3:+4056835 | None:intergenic |
| AGATGTGGTTAAAAGTATTT+TGG | 0.222853 | 7.3:-4056023 | MS.gene072541:CDS |
| CTTTCGTCTTCTCTTTCTCT+TGG | 0.260528 | 7.3:+4058148 | None:intergenic |
| CTGCTATTTGTTCTGATGGC+TGG | 0.262892 | 7.3:+4058065 | None:intergenic |
| CACACTTATTGTGTTGGTTT+GGG | 0.278946 | 7.3:-4057273 | MS.gene072541:CDS |
| GGGTCTCCATTCTGCATAAA+TGG | 0.287184 | 7.3:+4056733 | None:intergenic |
| TTCAAGGGGCCCAGTGGTTC+AGG | 0.296545 | 7.3:-4056689 | MS.gene072541:CDS |
| ATTGTCTCAAGATGCTGATT+TGG | 0.302977 | 7.3:-4056452 | MS.gene072541:CDS |
| ACATCAACCTTATCAGATTA+TGG | 0.305141 | 7.3:-4056607 | MS.gene072541:CDS |
| CGATGAGGATTATGTGGTTT+CGG | 0.319604 | 7.3:-4058912 | MS.gene072541:CDS |
| CAACTCAAAGCCTGCCTTCC+CGG | 0.326688 | 7.3:-4057152 | MS.gene072541:CDS |
| ATCCTTGAAGATGCCAATTC+CGG | 0.338850 | 7.3:-4058011 | MS.gene072541:CDS |
| CTTCTAGCAGAGGTCGAAAA+AGG | 0.347985 | 7.3:-4058196 | MS.gene072541:CDS |
| GTGCAGGCTTACTGATTGTT+TGG | 0.350078 | 7.3:+4057574 | None:intergenic |
| ACACACTTATTGTGTTGGTT+TGG | 0.353037 | 7.3:-4057274 | MS.gene072541:CDS |
| TTCAAATACCTGATCACGTT+CGG | 0.363155 | 7.3:+4057515 | None:intergenic |
| GAGAAGTACCTGAAGGTAAT+TGG | 0.364011 | 7.3:-4057248 | MS.gene072541:CDS |
| CTTTCTGCTATTTGTTCTGA+TGG | 0.368521 | 7.3:+4058061 | None:intergenic |
| CTCGCAATCTGAGCCGGAAT+TGG | 0.377934 | 7.3:+4057998 | None:intergenic |
| TTGTCTCAAGATGCTGATTT+GGG | 0.385700 | 7.3:-4056451 | MS.gene072541:intron |
| GGCCTGTGAATGCAGCTATA+TGG | 0.385787 | 7.3:-4056645 | MS.gene072541:CDS |
| CAGGTGATGGCCGGGAAGGC+AGG | 0.388209 | 7.3:+4057142 | None:intergenic |
| TTTCGTCTTCTCTTTCTCTT+GGG | 0.388977 | 7.3:+4058149 | None:intergenic |
| CTGCTGCTGCATGGGTGGAT+TGG | 0.389809 | 7.3:+4056583 | None:intergenic |
| TCTTCACAGTGGTTACGATT+AGG | 0.391290 | 7.3:-4055989 | MS.gene072541:CDS |
| GAGTCCACAAGCAGCGAGTA+TGG | 0.405089 | 7.3:+4056174 | None:intergenic |
| TAAATCAGATTCTTGAGCTT+GGG | 0.405889 | 7.3:+4057182 | None:intergenic |
| CTCCTGAGTTCTTCTTCAGT+TGG | 0.407979 | 7.3:+4057393 | None:intergenic |
| GTTGATGTCCCCAAAATTCC+AGG | 0.409316 | 7.3:+4056622 | None:intergenic |
| CCCCACATTGAATTAATTGC+TGG | 0.411682 | 7.3:-4056103 | MS.gene072541:CDS |
| TGCTATTTGTTCTGATGGCT+GGG | 0.413685 | 7.3:+4058066 | None:intergenic |
| ACAAGTGCCCGAACGTGATC+AGG | 0.415339 | 7.3:-4057523 | MS.gene072541:intron |
| GAAGAGTGAGGTGGGAAAAC+AGG | 0.429247 | 7.3:-4057736 | MS.gene072541:intron |
| GAAGGAGCTTCTCCGATGTC+TGG | 0.435810 | 7.3:-4057012 | MS.gene072541:CDS |
| TCTGCTGTTGTTGATCGTGC+AGG | 0.435897 | 7.3:+4057558 | None:intergenic |
| GATAGAATGGCTTCTACAAC+TGG | 0.435937 | 7.3:-4056907 | MS.gene072541:CDS |
| GTGATTTGAGAAAGAGGGTT+AGG | 0.441305 | 7.3:-4058961 | MS.gene072541:CDS |
| TTGGTTCCCTATTAATTTCA+GGG | 0.441433 | 7.3:+4056836 | None:intergenic |
| GCTACGTTCAATTGATAGAA+TGG | 0.442187 | 7.3:-4056920 | MS.gene072541:CDS |
| AGAGGAATCTCAAGGAAGAA+AGG | 0.442305 | 7.3:-4057781 | MS.gene072541:CDS |
| GGACAAATGAGTATGATTAA+AGG | 0.442629 | 7.3:-4056079 | MS.gene072541:CDS |
| TTTAAAGATGCCAAAGCAAC+TGG | 0.442699 | 7.3:+4057207 | None:intergenic |
| GAACACATAACGGACTCATA+TGG | 0.444472 | 7.3:+4057360 | None:intergenic |
| ATACTTTCTCGTATATGAAC+AGG | 0.444823 | 7.3:+4057123 | None:intergenic |
| AGAAAGAGAAGACGAAAGAA+TGG | 0.448531 | 7.3:-4058143 | MS.gene072541:CDS |
| GTTTATAGAAGACGAGGATT+CGG | 0.452935 | 7.3:-4058807 | MS.gene072541:CDS |
| AGAAAGAGGGTTAGGTCAAA+GGG | 0.453596 | 7.3:-4058953 | MS.gene072541:CDS |
| GAATAGCCCTGAAATTAATA+GGG | 0.454184 | 7.3:-4056842 | MS.gene072541:CDS |
| GGCCATATAGCTGCATTCAC+AGG | 0.458181 | 7.3:+4056643 | None:intergenic |
| GTTCTTATATGTTGAGAACT+TGG | 0.458529 | 7.3:+4056817 | None:intergenic |
| ATCTCTCCATTTATGCAGAA+TGG | 0.461478 | 7.3:-4056739 | MS.gene072541:CDS |
| GCTTCTCCGATGTCTGGAGG+TGG | 0.461950 | 7.3:-4057006 | MS.gene072541:CDS |
| TTAAATCAGATTCTTGAGCT+TGG | 0.463615 | 7.3:+4057181 | None:intergenic |
| CCTGCACACACTTATTGTGT+TGG | 0.464630 | 7.3:-4057279 | MS.gene072541:CDS |
| TCTTCTTCTTTGACAGTAGC+GGG | 0.465078 | 7.3:+4056532 | None:intergenic |
| AATAGATCGAGGGCTAAAAC+TGG | 0.465701 | 7.3:-4058752 | MS.gene072541:CDS |
| TTCAGGTTATAGTACTTTCA+AGG | 0.466528 | 7.3:-4056221 | MS.gene072541:intron |
| TCAAATACCTGATCACGTTC+GGG | 0.467441 | 7.3:+4057516 | None:intergenic |
| GAGGACTTGAAGAGTGAGGT+GGG | 0.468611 | 7.3:-4057744 | MS.gene072541:CDS |
| TGGACAATCAGACACATTCC+CGG | 0.469120 | 7.3:+4058883 | None:intergenic |
| CACAGGCCCGTTCGAAAACA+TGG | 0.469763 | 7.3:+4056660 | None:intergenic |
| TGTTTGATCTGCTGCTGCAT+GGG | 0.470031 | 7.3:+4056575 | None:intergenic |
| ATGGTTGAATCCTGAACCAC+TGG | 0.473286 | 7.3:+4056679 | None:intergenic |
| ATGTTTGATCTGCTGCTGCA+TGG | 0.473519 | 7.3:+4056574 | None:intergenic |
| GCAAACGTGATTTGAGAAAG+AGG | 0.473708 | 7.3:-4058967 | MS.gene072541:CDS |
| CTTCTCCGATGTCTGGAGGT+GGG | 0.475968 | 7.3:-4057005 | MS.gene072541:CDS |
| GAGGTGAAGACATCAGGTTC+AGG | 0.479499 | 7.3:+4057097 | None:intergenic |
| GGAATCTCTGCTTACACAAA+GGG | 0.482495 | 7.3:+4057595 | None:intergenic |
| ATGTATGAGGTGAAGACATC+AGG | 0.483949 | 7.3:+4057091 | None:intergenic |
| AGACATCGGAGAAGCTCCTT+CGG | 0.486565 | 7.3:+4057014 | None:intergenic |
| ATGTGGTTTCGGATGATGCC+GGG | 0.487381 | 7.3:-4058901 | MS.gene072541:CDS |
| GAGAAAGAGGGTTAGGTCAA+AGG | 0.488109 | 7.3:-4058954 | MS.gene072541:CDS |
| TGGTTGTAGACCAGTTGCTT+TGG | 0.490683 | 7.3:-4057217 | MS.gene072541:CDS |
| TTTGTAGCTGCTGAACTTGA+CGG | 0.493087 | 7.3:+4056950 | None:intergenic |
| TTCTCCGATGTCTGGAGGTG+GGG | 0.496212 | 7.3:-4057004 | MS.gene072541:CDS |
| GAAAGAGATCAGTCCTGAAA+AGG | 0.496295 | 7.3:-4058043 | MS.gene072541:CDS |
| CCATAAGAATGAGCAATTCA+AGG | 0.500298 | 7.3:-4056705 | MS.gene072541:CDS |
| GATTGGTCCATAATCTGATA+AGG | 0.500628 | 7.3:+4056600 | None:intergenic |
| TCACAGTACCAATTACCTTC+AGG | 0.502598 | 7.3:+4057240 | None:intergenic |
| AAAGGAGCGATTGCAGTCAA+TGG | 0.505261 | 7.3:-4056494 | MS.gene072541:CDS |
| ACAGATGGTAAAGGGAAGAA+AGG | 0.505504 | 7.3:-4058996 | None:intergenic |
| AGAAGACGAGGATTCGGAAA+AGG | 0.505843 | 7.3:-4058801 | MS.gene072541:CDS |
| AGCCGGAATTGGCATCTTCA+AGG | 0.506290 | 7.3:+4058009 | None:intergenic |
| TTGATCTGCTGCTGCATGGG+TGG | 0.507527 | 7.3:+4056578 | None:intergenic |
| GTATATGAACAGGTGATGGC+CGG | 0.507755 | 7.3:+4057133 | None:intergenic |
| TTGCTCATTCTTATGGAGAA+GGG | 0.514261 | 7.3:+4056712 | None:intergenic |
| TATGTGGTTTCGGATGATGC+CGG | 0.515722 | 7.3:-4058902 | MS.gene072541:CDS |
| GTGAATGCAGCTATATGGCC+TGG | 0.517468 | 7.3:-4056640 | MS.gene072541:CDS |
| AGATAACTTGCACATTGTAA+AGG | 0.517805 | 7.3:-4056512 | MS.gene072541:CDS |
| GTGGTTACGATTAGGACTTT+AGG | 0.519386 | 7.3:-4055981 | None:intergenic |
| GAGGAATCTCAAGGAAGAAA+GGG | 0.523223 | 7.3:-4057780 | MS.gene072541:CDS |
| GGAAAAGGAGGTGATTCAAC+GGG | 0.526113 | 7.3:-4058786 | MS.gene072541:CDS |
| ATCTCAAGGAAGAAAGGGTA+AGG | 0.528597 | 7.3:-4057775 | MS.gene072541:CDS |
| ATTGCTCATTCTTATGGAGA+AGG | 0.529056 | 7.3:+4056711 | None:intergenic |
| CACCGTCTCTCTGATAAAGT+TGG | 0.530129 | 7.3:+4056979 | None:intergenic |
| TCTTCGAATGGAAAATGAAG+TGG | 0.531620 | 7.3:-4057868 | MS.gene072541:CDS |
| TCAAACATTGTCACTGAGGT+TGG | 0.532392 | 7.3:-4056559 | MS.gene072541:CDS |
| AGAGGACTTGAAGAGTGAGG+TGG | 0.533578 | 7.3:-4057745 | MS.gene072541:CDS |
| GAGGAGAGCTTCTCTTCGAA+TGG | 0.534382 | 7.3:-4057880 | MS.gene072541:CDS |
| CACATTGAATTAATTGCTGG+TGG | 0.534434 | 7.3:-4056100 | MS.gene072541:CDS |
| TTTGGATGGATGTGCGGCTG+AGG | 0.536263 | 7.3:-4058843 | MS.gene072541:CDS |
| TAATTCAATGTGGGGACAGA+CGG | 0.539650 | 7.3:+4056111 | None:intergenic |
| ATGGAAGCCTCCAGCACGGA+AGG | 0.541330 | 7.3:-4057817 | MS.gene072541:CDS |
| GCCTCCAGCACGGAAGGGTA+AGG | 0.541396 | 7.3:-4057811 | MS.gene072541:CDS |
| ATCTTCTTCTTTGACAGTAG+CGG | 0.541489 | 7.3:+4056531 | None:intergenic |
| TCCTTACCCTTCCGTGCTGG+AGG | 0.542762 | 7.3:+4057810 | None:intergenic |
| CATAAGAATGAGCAATTCAA+GGG | 0.546538 | 7.3:-4056704 | MS.gene072541:CDS |
| GAAATATAAGAAGGAACTTG+AGG | 0.547708 | 7.3:-4057899 | MS.gene072541:CDS |
| CGAGGGCTAAAACTGGTGTA+AGG | 0.548094 | 7.3:-4058745 | MS.gene072541:CDS |
| TCTAGACTCGCAATCTGAGC+CGG | 0.548400 | 7.3:+4057992 | None:intergenic |
| CCAACACAATAAGTGTGTGC+AGG | 0.549150 | 7.3:+4057279 | None:intergenic |
| TCTACAACTGGCAGAACTAT+CGG | 0.549352 | 7.3:-4056895 | MS.gene072541:CDS |
| GATCAGTCCTGAAAAGGAGA+AGG | 0.552181 | 7.3:-4058037 | MS.gene072541:CDS |
| TGGGGACAGACGGATGGTGG+AGG | 0.552215 | 7.3:+4056121 | None:intergenic |
| ATGACACTCTGAACACATAA+CGG | 0.553670 | 7.3:+4057350 | None:intergenic |
| ATGTGTTCAGAGTGTCATCT+AGG | 0.555373 | 7.3:-4057345 | MS.gene072541:CDS |
| TGCTCATTCTTATGGAGAAG+GGG | 0.556205 | 7.3:+4056713 | None:intergenic |
| GAAGGGTAAGGAAAAGATAG+AGG | 0.556670 | 7.3:-4057799 | MS.gene072541:CDS |
| GTGTGAGAACAGATGGTAAA+GGG | 0.557092 | 7.3:-4059004 | None:intergenic |
| CAACACAATAAGTGTGTGCA+GGG | 0.558064 | 7.3:+4057280 | None:intergenic |
| TGATTCCGATGAGGATTATG+TGG | 0.558363 | 7.3:-4058918 | MS.gene072541:CDS |
| CATACCATACTCGCTGCTTG+TGG | 0.558512 | 7.3:-4056178 | MS.gene072541:CDS |
| AGTAGAGGACTTGAAGAGTG+AGG | 0.559366 | 7.3:-4057748 | MS.gene072541:CDS |
| ACACTTATTGTGTTGGTTTG+GGG | 0.561817 | 7.3:-4057272 | MS.gene072541:CDS |
| AACAAAAGAATCAAAACAAG+AGG | 0.563400 | 7.3:+4056048 | None:intergenic |
| ATTCAAGTTACTTACTGTAC+CGG | 0.563595 | 7.3:+4056861 | None:intergenic |
| ACCAGCAATTAATTCAATGT+GGG | 0.568218 | 7.3:+4056102 | None:intergenic |
| ATGTGGGGACAGACGGATGG+TGG | 0.575769 | 7.3:+4056118 | None:intergenic |
| CCTTGACTAAAAGATGTATG+AGG | 0.577067 | 7.3:+4057078 | None:intergenic |
| ATCAGTCCTGAAAAGGAGAA+GGG | 0.579310 | 7.3:-4058036 | MS.gene072541:CDS |
| CAAACGTGATTTGAGAAAGA+GGG | 0.579793 | 7.3:-4058966 | MS.gene072541:CDS |
| ATGAAGATCTACATCAGCAA+TGG | 0.581305 | 7.3:-4057836 | MS.gene072541:CDS |
| AGAACAGGTGAGAGAAGCCG+TGG | 0.582933 | 7.3:-4057931 | MS.gene072541:CDS |
| CGGAAAAGGAGGTGATTCAA+CGG | 0.587891 | 7.3:-4058787 | MS.gene072541:CDS |
| ACTATCGGTGTTTCAGCTAC+CGG | 0.588312 | 7.3:-4056880 | MS.gene072541:CDS |
| CACCAGCAATTAATTCAATG+TGG | 0.590559 | 7.3:+4056101 | None:intergenic |
| ACGATCAACAACAGCAGAAG+AGG | 0.590744 | 7.3:-4057553 | MS.gene072541:CDS |
| TATATGAACAGGTGATGGCC+GGG | 0.592446 | 7.3:+4057134 | None:intergenic |
| TGACTAAATTTAATAGATCG+AGG | 0.593160 | 7.3:-4058763 | MS.gene072541:CDS |
| TATATTTCCACACAACTCCA+CGG | 0.596331 | 7.3:+4057914 | None:intergenic |
| AGTTGTGTGGAAATATAAGA+AGG | 0.598804 | 7.3:-4057908 | MS.gene072541:CDS |
| ATAGTAAACTCATAATCAGA+TGG | 0.599794 | 7.3:+4057969 | None:intergenic |
| GGAGCTTCTCCGATGTCTGG+AGG | 0.601337 | 7.3:-4057009 | MS.gene072541:CDS |
| GTACTTTCAAGGACATTGCA+AGG | 0.602317 | 7.3:-4056210 | MS.gene072541:CDS |
| TGAACAGGTGATGGCCGGGA+AGG | 0.603021 | 7.3:+4057138 | None:intergenic |
| AGGGTTAGGTCAAAGGGCAG+TGG | 0.607527 | 7.3:-4058947 | MS.gene072541:CDS |
| TGGAATCTCTGCTTACACAA+AGG | 0.608667 | 7.3:+4057594 | None:intergenic |
| TCTCGTATATGAACAGGTGA+TGG | 0.613237 | 7.3:+4057129 | None:intergenic |
| CGAATGGAAAATGAAGTGGT+TGG | 0.613778 | 7.3:-4057864 | MS.gene072541:CDS |
| GAAAAGATAGAGGAATCTCA+AGG | 0.614767 | 7.3:-4057789 | MS.gene072541:CDS |
| GGTGCCCCACCTCCAGACAT+CGG | 0.618253 | 7.3:+4057000 | None:intergenic |
| CGAAACCACATAATCCTCAT+CGG | 0.618800 | 7.3:+4058913 | None:intergenic |
| TGATGGGTTTATAGAAGACG+AGG | 0.620222 | 7.3:-4058813 | MS.gene072541:CDS |
| GACTAAATTTAATAGATCGA+GGG | 0.620528 | 7.3:-4058762 | MS.gene072541:CDS |
| AGCCAACTGAAGAAGAACTC+AGG | 0.620739 | 7.3:-4057395 | MS.gene072541:CDS |
| GTTTCTGCAACTTCTAGCAG+AGG | 0.621858 | 7.3:-4058206 | MS.gene072541:CDS |
| TCAATGTGGGGACAGACGGA+TGG | 0.622245 | 7.3:+4056115 | None:intergenic |
| CACCAACTTTATCAGAGAGA+CGG | 0.623622 | 7.3:-4056981 | MS.gene072541:CDS |
| AAACTGGTGTAAGGCGTCAG+CGG | 0.637909 | 7.3:-4058736 | MS.gene072541:CDS |
| TGTGTGAGAACAGATGGTAA+AGG | 0.641607 | 7.3:-4059005 | None:intergenic |
| GAGCAATTCAAGGGGCCCAG+TGG | 0.643280 | 7.3:-4056695 | MS.gene072541:CDS |
| AGACGAGGATTCGGAAAAGG+AGG | 0.643886 | 7.3:-4058798 | MS.gene072541:CDS |
| TTCTCAACATATAAGAACAC+AGG | 0.644148 | 7.3:-4056812 | MS.gene072541:CDS |
| AGAGAAGCCGTGGAGTTGTG+TGG | 0.645101 | 7.3:-4057921 | MS.gene072541:CDS |
| ATCAACAACAGCAGAAGAGG+CGG | 0.646830 | 7.3:-4057550 | MS.gene072541:CDS |
| AGCAATGGAAGCCTCCAGCA+CGG | 0.653022 | 7.3:-4057821 | MS.gene072541:CDS |
| CATATAAGAACACAGGACGT+AGG | 0.654634 | 7.3:-4056805 | MS.gene072541:CDS |
| AAGAGAAGACGAAAGAATGG+AGG | 0.656131 | 7.3:-4058140 | MS.gene072541:CDS |
| TGGAAGCCTCCAGCACGGAA+GGG | 0.661115 | 7.3:-4057816 | MS.gene072541:CDS |
| TGTCATCTAGGTGGAGACGA+TGG | 0.665066 | 7.3:-4057333 | MS.gene072541:CDS |
| TGTTCAGAGTGTCATCTAGG+TGG | 0.667853 | 7.3:-4057342 | MS.gene072541:CDS |
| CCAGCAATTAATTCAATGTG+GGG | 0.670551 | 7.3:+4056103 | None:intergenic |
| CAACTTTATCAGAGAGACGG+TGG | 0.672641 | 7.3:-4056978 | MS.gene072541:CDS |
| GAAGGTAATTGGTACTGTGA+TGG | 0.672974 | 7.3:-4057237 | MS.gene072541:CDS |
| TTGGGGAGAGAAGTACCTGA+AGG | 0.674115 | 7.3:-4057255 | MS.gene072541:CDS |
| TGGTTCTGATGATTCCGATG+AGG | 0.681336 | 7.3:-4058927 | MS.gene072541:CDS |
| TGGTTGAATCCTGAACCACT+GGG | 0.690869 | 7.3:+4056680 | None:intergenic |
| TCAAGAATCTGATTTAAGAG+CGG | 0.691879 | 7.3:-4057175 | MS.gene072541:CDS |
| CAGATCAAACATTGTCACTG+AGG | 0.704891 | 7.3:-4056563 | MS.gene072541:CDS |
| ATAAGAATGAGCAATTCAAG+GGG | 0.716344 | 7.3:-4056703 | MS.gene072541:CDS |
| ATATATCACAGAGTAGCATG+AGG | 0.719343 | 7.3:+4057310 | None:intergenic |
| GAATGTGTCTGATTGTCCAG+AGG | 0.723141 | 7.3:-4058879 | MS.gene072541:CDS |
| AACACAATAAGTGTGTGCAG+GGG | 0.725731 | 7.3:+4057281 | None:intergenic |
| ACTCGAGCACAATACGAGTG+AGG | 0.731655 | 7.3:-4056155 | MS.gene072541:CDS |
| GAAAGAATGGAGGATCAACG+AGG | 0.744731 | 7.3:-4058130 | MS.gene072541:CDS |
| ACACAAGAATGTCTTCACAG+TGG | 0.768688 | 7.3:-4056000 | MS.gene072541:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTCTATCATTTATATATCA+TGG | - | chr7.3:4058552-4058571 | MS.gene072541:intron | 20.0% |
| !!! | AATATTTTGATTTTACATGC+AGG | - | chr7.3:4057550-4057569 | MS.gene072541:CDS | 20.0% |
| ! | AAATTCTTCGTCTTCATAAA+TGG | + | chr7.3:4056640-4056659 | None:intergenic | 25.0% |
| ! | AACAAAAGAATCAAAACAAG+AGG | + | chr7.3:4058929-4058948 | None:intergenic | 25.0% |
| ! | AGGAAAATAAAAGAAGAGTA+AGG | - | chr7.3:4057282-4057301 | MS.gene072541:CDS | 25.0% |
| ! | ATAGTAAACTCATAATCAGA+TGG | + | chr7.3:4057008-4057027 | None:intergenic | 25.0% |
| ! | CGCATTAAGAAGAAAAATAA+TGG | - | chr7.3:4056708-4056727 | MS.gene072541:CDS | 25.0% |
| ! | GAAAATAAAAGAAGAGTAAG+GGG | - | chr7.3:4057284-4057303 | MS.gene072541:CDS | 25.0% |
| ! | GACTAAATTTAATAGATCGA+GGG | - | chr7.3:4056212-4056231 | MS.gene072541:CDS | 25.0% |
| ! | GGAAAATAAAAGAAGAGTAA+GGG | - | chr7.3:4057283-4057302 | MS.gene072541:CDS | 25.0% |
| ! | TCATCATTCATTACATCATA+AGG | - | chr7.3:4058579-4058598 | MS.gene072541:intron | 25.0% |
| ! | TGACTAAATTTAATAGATCG+AGG | - | chr7.3:4056211-4056230 | MS.gene072541:CDS | 25.0% |
| !!! | AAATTTTGACCATTTGCTTA+TGG | - | chr7.3:4057496-4057515 | MS.gene072541:intron | 25.0% |
| !!! | AGATGTGGTTAAAAGTATTT+TGG | - | chr7.3:4058951-4058970 | MS.gene072541:CDS | 25.0% |
| !!! | TCTTGTTTTGATTCTTTTGT+TGG | - | chr7.3:4058928-4058947 | MS.gene072541:CDS | 25.0% |
| !!! | TGTCTTTTATGTATTGATTC+AGG | - | chr7.3:4058736-4058755 | MS.gene072541:CDS | 25.0% |
| !!! | TTACAGATTTCTAGTATCAT+AGG | + | chr7.3:4058639-4058658 | None:intergenic | 25.0% |
| AAAAATAATGGCACGAAGAT+GGG | - | chr7.3:4056720-4056739 | MS.gene072541:CDS | 30.0% | |
| AAAGAAAAACAATCATCCTC+TGG | + | chr7.3:4056114-4056133 | None:intergenic | 30.0% | |
| ACATCAACCTTATCAGATTA+TGG | - | chr7.3:4058367-4058386 | MS.gene072541:intron | 30.0% | |
| ACCAGCAATTAATTCAATGT+GGG | + | chr7.3:4058875-4058894 | None:intergenic | 30.0% | |
| AGTTGTGTGGAAATATAAGA+AGG | - | chr7.3:4057066-4057085 | MS.gene072541:CDS | 30.0% | |
| ATAAGAATGAGCAATTCAAG+GGG | - | chr7.3:4058271-4058290 | MS.gene072541:intron | 30.0% | |
| ATACTTTCTCGTATATGAAC+AGG | + | chr7.3:4057854-4057873 | None:intergenic | 30.0% | |
| ATTGCAAAACCATAAGCAAA+TGG | + | chr7.3:4057508-4057527 | None:intergenic | 30.0% | |
| CATAAGAATGAGCAATTCAA+GGG | - | chr7.3:4058270-4058289 | MS.gene072541:intron | 30.0% | |
| CCATTACTAGAAATCTGTAA+TGG | - | chr7.3:4058608-4058627 | MS.gene072541:intron | 30.0% | |
| GAAATATAAGAAGGAACTTG+AGG | - | chr7.3:4057075-4057094 | MS.gene072541:CDS | 30.0% | |
| GAAGAACAAGATGAAGAAAA+AGG | - | chr7.3:4056339-4056358 | MS.gene072541:intron | 30.0% | |
| GAATAGCCCTGAAATTAATA+GGG | - | chr7.3:4058132-4058151 | MS.gene072541:CDS | 30.0% | |
| GGACAAATGAGTATGATTAA+AGG | - | chr7.3:4058895-4058914 | MS.gene072541:CDS | 30.0% | |
| GTTCTTATATGTTGAGAACT+TGG | + | chr7.3:4058160-4058179 | None:intergenic | 30.0% | |
| TAAATCAGATTCTTGAGCTT+GGG | + | chr7.3:4057795-4057814 | None:intergenic | 30.0% | |
| TCAAGAATCTGATTTAAGAG+CGG | - | chr7.3:4057799-4057818 | MS.gene072541:CDS | 30.0% | |
| TGAAGACGAAGAATTTAAAC+CGG | - | chr7.3:4056644-4056663 | MS.gene072541:CDS | 30.0% | |
| TGAATAGCCCTGAAATTAAT+AGG | - | chr7.3:4058131-4058150 | MS.gene072541:CDS | 30.0% | |
| TTAAATCAGATTCTTGAGCT+TGG | + | chr7.3:4057796-4057815 | None:intergenic | 30.0% | |
| TTCTCAACATATAAGAACAC+AGG | - | chr7.3:4058162-4058181 | MS.gene072541:CDS | 30.0% | |
| TTGGTTCCCTATTAATTTCA+GGG | + | chr7.3:4058141-4058160 | None:intergenic | 30.0% | |
| ! | AGATAACTTGCACATTGTAA+AGG | - | chr7.3:4058462-4058481 | MS.gene072541:intron | 30.0% |
| ! | ATTCAAGTTACTTACTGTAC+CGG | + | chr7.3:4058116-4058135 | None:intergenic | 30.0% |
| ! | CTCATACATCTTTTAGTCAA+GGG | - | chr7.3:4057897-4057916 | MS.gene072541:CDS | 30.0% |
| ! | CTTTCATCTTCTAGATTTTC+TGG | - | chr7.3:4057929-4057948 | MS.gene072541:CDS | 30.0% |
| ! | TCAACGAAGATTCTTTTCAT+AGG | + | chr7.3:4058670-4058689 | None:intergenic | 30.0% |
| ! | TTACAATGATGTTGATGAAG+AGG | - | chr7.3:4056416-4056435 | MS.gene072541:intron | 30.0% |
| ! | TTCAGGTTATAGTACTTTCA+AGG | - | chr7.3:4058753-4058772 | MS.gene072541:CDS | 30.0% |
| ! | TTTTTGCTTTGCTTGCATTA+TGG | - | chr7.3:4057331-4057350 | MS.gene072541:CDS | 30.0% |
| !! | AGAGGATGATTGTTTTTCTT+TGG | - | chr7.3:4056113-4056132 | MS.gene072541:CDS | 30.0% |
| !! | CCATTACAGATTTCTAGTAA+TGG | + | chr7.3:4058611-4058630 | None:intergenic | 30.0% |
| !! | GATGATTGTTTTTCTTTGGA+TGG | - | chr7.3:4056117-4056136 | MS.gene072541:CDS | 30.0% |
| !!! | ACATTTTTTGAGGAGAGATT+AGG | - | chr7.3:4058205-4058224 | MS.gene072541:CDS | 30.0% |
| !!! | ATCCTATCACACATTTTTTG+AGG | - | chr7.3:4058195-4058214 | MS.gene072541:CDS | 30.0% |
| !!! | TGATGATGCAGATGATTTTT+TGG | - | chr7.3:4056878-4056897 | MS.gene072541:CDS | 30.0% |
| AAAGGGTAAGGAAAAAGTAG+AGG | - | chr7.3:4057211-4057230 | MS.gene072541:CDS | 35.0% | |
| AGAAAAAGAAGAAGTGGAAG+TGG | - | chr7.3:4056506-4056525 | MS.gene072541:CDS | 35.0% | |
| AGAAAGAGAAGACGAAAGAA+TGG | - | chr7.3:4056831-4056850 | MS.gene072541:CDS | 35.0% | |
| AGAGGAAGAAAAAGAAGAAG+TGG | - | chr7.3:4056500-4056519 | MS.gene072541:CDS | 35.0% | |
| ATATATCACAGAGTAGCATG+AGG | + | chr7.3:4057667-4057686 | None:intergenic | 35.0% | |
| ATCTCTCCATTTATGCAGAA+TGG | - | chr7.3:4058235-4058254 | MS.gene072541:intron | 35.0% | |
| ATCTTCTTCTTTGACAGTAG+CGG | + | chr7.3:4058446-4058465 | None:intergenic | 35.0% | |
| ATGAAGATCTACATCAGCAA+TGG | - | chr7.3:4057138-4057157 | MS.gene072541:CDS | 35.0% | |
| ATGACACTCTGAACACATAA+CGG | + | chr7.3:4057627-4057646 | None:intergenic | 35.0% | |
| ATTGCTCATTCTTATGGAGA+AGG | + | chr7.3:4058266-4058285 | None:intergenic | 35.0% | |
| CAAACGTGATTTGAGAAAGA+GGG | - | chr7.3:4056008-4056027 | MS.gene072541:CDS | 35.0% | |
| CACATTGAATTAATTGCTGG+TGG | - | chr7.3:4058874-4058893 | MS.gene072541:CDS | 35.0% | |
| CACCAGCAATTAATTCAATG+TGG | + | chr7.3:4058876-4058895 | None:intergenic | 35.0% | |
| CCAGCAATTAATTCAATGTG+GGG | + | chr7.3:4058874-4058893 | None:intergenic | 35.0% | |
| CCATAAGAATGAGCAATTCA+AGG | - | chr7.3:4058269-4058288 | MS.gene072541:intron | 35.0% | |
| CCTTGAATTGCTCATTCTTA+TGG | + | chr7.3:4058272-4058291 | None:intergenic | 35.0% | |
| CCTTGACTAAAAGATGTATG+AGG | + | chr7.3:4057899-4057918 | None:intergenic | 35.0% | |
| CTCCTCAAAAAATGTGTGAT+AGG | + | chr7.3:4058200-4058219 | None:intergenic | 35.0% | |
| CTTGGTTCCCTATTAATTTC+AGG | + | chr7.3:4058142-4058161 | None:intergenic | 35.0% | |
| GAAAAATAATGGCACGAAGA+TGG | - | chr7.3:4056719-4056738 | MS.gene072541:CDS | 35.0% | |
| GAAAAGATAGAGGAATCTCA+AGG | - | chr7.3:4057185-4057204 | MS.gene072541:CDS | 35.0% | |
| GCTACGTTCAATTGATAGAA+TGG | - | chr7.3:4058054-4058073 | MS.gene072541:CDS | 35.0% | |
| GGATGATGAATTTAAACCAG+AGG | - | chr7.3:4056551-4056570 | MS.gene072541:CDS | 35.0% | |
| GTTTATAGAAGACGAGGATT+CGG | - | chr7.3:4056167-4056186 | MS.gene072541:CDS | 35.0% | |
| TATATTTCCACACAACTCCA+CGG | + | chr7.3:4057063-4057082 | None:intergenic | 35.0% | |
| TCTTCGAATGGAAAATGAAG+TGG | - | chr7.3:4057106-4057125 | MS.gene072541:CDS | 35.0% | |
| TCTTCTTCTTCTTCTTCTTC+TGG | + | chr7.3:4056318-4056337 | None:intergenic | 35.0% | |
| TTCAAATACCTGATCACGTT+CGG | + | chr7.3:4057462-4057481 | None:intergenic | 35.0% | |
| TTGCTCATTCTTATGGAGAA+GGG | + | chr7.3:4058265-4058284 | None:intergenic | 35.0% | |
| TTTAAAGATGCCAAAGCAAC+TGG | + | chr7.3:4057770-4057789 | None:intergenic | 35.0% | |
| TTTCGTCTTCTCTTTCTCTT+GGG | + | chr7.3:4056828-4056847 | None:intergenic | 35.0% | |
| ! | ACATCTTTTAGTCAAGGGTT+CGG | - | chr7.3:4057902-4057921 | MS.gene072541:CDS | 35.0% |
| ! | ATTCAACCATGTTTTCGAAC+GGG | - | chr7.3:4058308-4058327 | MS.gene072541:intron | 35.0% |
| ! | ATTGTCTCAAGATGCTGATT+TGG | - | chr7.3:4058522-4058541 | MS.gene072541:intron | 35.0% |
| ! | CCTCATACATCTTTTAGTCA+AGG | - | chr7.3:4057896-4057915 | MS.gene072541:CDS | 35.0% |
| ! | CTCTGAAGAAGAAAAAGAAC+AGG | - | chr7.3:4057028-4057047 | MS.gene072541:CDS | 35.0% |
| ! | CTTTCTGCTATTTGTTCTGA+TGG | + | chr7.3:4056916-4056935 | None:intergenic | 35.0% |
| ! | GATTCAACCATGTTTTCGAA+CGG | - | chr7.3:4058307-4058326 | MS.gene072541:intron | 35.0% |
| ! | GATTGGTCCATAATCTGATA+AGG | + | chr7.3:4058377-4058396 | None:intergenic | 35.0% |
| ! | TGATTCTTTTGTTGGAGATG+TGG | - | chr7.3:4058936-4058955 | MS.gene072541:CDS | 35.0% |
| ! | TTTTTCTTTGGATGGATGTG+CGG | - | chr7.3:4056125-4056144 | MS.gene072541:CDS | 35.0% |
| !! | ACACACTTATTGTGTTGGTT+TGG | - | chr7.3:4057700-4057719 | MS.gene072541:intron | 35.0% |
| !! | ACACTTATTGTGTTGGTTTG+GGG | - | chr7.3:4057702-4057721 | MS.gene072541:intron | 35.0% |
| !! | AGAAGAAGGCTTTGAAGAAA+AGG | - | chr7.3:4056745-4056764 | MS.gene072541:CDS | 35.0% |
| !! | CACACTTATTGTGTTGGTTT+GGG | - | chr7.3:4057701-4057720 | MS.gene072541:intron | 35.0% |
| !! | GAAGAAGGCTTTGAAGAAAA+GGG | - | chr7.3:4056746-4056765 | MS.gene072541:CDS | 35.0% |
| !! | TTGTCTCAAGATGCTGATTT+GGG | - | chr7.3:4058523-4058542 | MS.gene072541:intron | 35.0% |
| AACACAATAAGTGTGTGCAG+GGG | + | chr7.3:4057696-4057715 | None:intergenic | 40.0% | |
| AAGAGAAGACGAAAGAATGG+AGG | - | chr7.3:4056834-4056853 | MS.gene072541:CDS | 40.0% | |
| AAGGGGCAGAAAGAAGAAAA+AGG | - | chr7.3:4056608-4056627 | MS.gene072541:CDS | 40.0% | |
| AATAGATCGAGGGCTAAAAC+TGG | - | chr7.3:4056222-4056241 | MS.gene072541:intron | 40.0% | |
| ACACAAGAATGTCTTCACAG+TGG | - | chr7.3:4058974-4058993 | MS.gene072541:CDS | 40.0% | |
| AGAAAGAGGGTTAGGTCAAA+GGG | - | chr7.3:4056021-4056040 | MS.gene072541:CDS | 40.0% | |
| AGAAGAAGTGGAAGTGGAAA+TGG | - | chr7.3:4056464-4056483 | MS.gene072541:CDS | 40.0% | |
| AGAAGATTTCACAGATGAGG+AGG | - | chr7.3:4056575-4056594 | MS.gene072541:CDS | 40.0% | |
| AGACGAAGAATTTAAACCGG+AGG | - | chr7.3:4056647-4056666 | MS.gene072541:CDS | 40.0% | |
| AGAGGAAGAAGTAGAAGAAG+AGG | - | chr7.3:4056368-4056387 | MS.gene072541:intron | 40.0% | |
| AGAGGAATCTCAAGGAAGAA+AGG | - | chr7.3:4057193-4057212 | MS.gene072541:CDS | 40.0% | |
| AGAGGTAGGTGAAAATGATG+AGG | - | chr7.3:4056530-4056549 | MS.gene072541:CDS | 40.0% | |
| ATCAGTCCTGAAAAGGAGAA+GGG | - | chr7.3:4056938-4056957 | MS.gene072541:CDS | 40.0% | |
| ATCCTTGAAGATGCCAATTC+CGG | - | chr7.3:4056963-4056982 | MS.gene072541:CDS | 40.0% | |
| ATCTCAAGGAAGAAAGGGTA+AGG | - | chr7.3:4057199-4057218 | MS.gene072541:CDS | 40.0% | |
| ATGAGGAGGAAGAAGAAACA+AGG | - | chr7.3:4056589-4056608 | MS.gene072541:CDS | 40.0% | |
| ATGTATGAGGTGAAGACATC+AGG | + | chr7.3:4057886-4057905 | None:intergenic | 40.0% | |
| CAACACAATAAGTGTGTGCA+GGG | + | chr7.3:4057697-4057716 | None:intergenic | 40.0% | |
| CACCAACTTTATCAGAGAGA+CGG | - | chr7.3:4057993-4058012 | MS.gene072541:CDS | 40.0% | |
| CAGATCAAACATTGTCACTG+AGG | - | chr7.3:4058411-4058430 | MS.gene072541:intron | 40.0% | |
| CATATAAGAACACAGGACGT+AGG | - | chr7.3:4058169-4058188 | MS.gene072541:CDS | 40.0% | |
| CCCCACATTGAATTAATTGC+TGG | - | chr7.3:4058871-4058890 | MS.gene072541:CDS | 40.0% | |
| CGAAACCACATAATCCTCAT+CGG | + | chr7.3:4056064-4056083 | None:intergenic | 40.0% | |
| CGAATGGAAAATGAAGTGGT+TGG | - | chr7.3:4057110-4057129 | MS.gene072541:CDS | 40.0% | |
| CGATGAGGATTATGTGGTTT+CGG | - | chr7.3:4056062-4056081 | MS.gene072541:CDS | 40.0% | |
| CTAATGTAAGTAAAGCCTCG+AGG | - | chr7.3:4056262-4056281 | MS.gene072541:intron | 40.0% | |
| CTTTCGTCTTCTCTTTCTCT+TGG | + | chr7.3:4056829-4056848 | None:intergenic | 40.0% | |
| GAAAGAGATCAGTCCTGAAA+AGG | - | chr7.3:4056931-4056950 | MS.gene072541:CDS | 40.0% | |
| GAAGGGTAAGGAAAAGATAG+AGG | - | chr7.3:4057175-4057194 | MS.gene072541:CDS | 40.0% | |
| GAAGGTAATTGGTACTGTGA+TGG | - | chr7.3:4057737-4057756 | MS.gene072541:CDS | 40.0% | |
| GAGGAATCTCAAGGAAGAAA+GGG | - | chr7.3:4057194-4057213 | MS.gene072541:CDS | 40.0% | |
| GATAGAATGGCTTCTACAAC+TGG | - | chr7.3:4058067-4058086 | MS.gene072541:CDS | 40.0% | |
| GCAAACGTGATTTGAGAAAG+AGG | - | chr7.3:4056007-4056026 | MS.gene072541:CDS | 40.0% | |
| GGAAGAAGATTTCACAGATG+AGG | - | chr7.3:4056572-4056591 | MS.gene072541:CDS | 40.0% | |
| GGAATCTCTGCTTACACAAA+GGG | + | chr7.3:4057382-4057401 | None:intergenic | 40.0% | |
| GTACTTTCAAGGACATTGCA+AGG | - | chr7.3:4058764-4058783 | MS.gene072541:CDS | 40.0% | |
| GTGATTTGAGAAAGAGGGTT+AGG | - | chr7.3:4056013-4056032 | MS.gene072541:CDS | 40.0% | |
| TAATTCAATGTGGGGACAGA+CGG | + | chr7.3:4058866-4058885 | None:intergenic | 40.0% | |
| TCAAACATTGTCACTGAGGT+TGG | - | chr7.3:4058415-4058434 | MS.gene072541:intron | 40.0% | |
| TCAAATACCTGATCACGTTC+GGG | + | chr7.3:4057461-4057480 | None:intergenic | 40.0% | |
| TCACAGTACCAATTACCTTC+AGG | + | chr7.3:4057737-4057756 | None:intergenic | 40.0% | |
| TCTACAACTGGCAGAACTAT+CGG | - | chr7.3:4058079-4058098 | MS.gene072541:CDS | 40.0% | |
| TCTCGTATATGAACAGGTGA+TGG | + | chr7.3:4057848-4057867 | None:intergenic | 40.0% | |
| TCTGTGAAATCTTCTTCCTC+TGG | + | chr7.3:4056570-4056589 | None:intergenic | 40.0% | |
| TCTTCACAGTGGTTACGATT+AGG | - | chr7.3:4058985-4059004 | MS.gene072541:CDS | 40.0% | |
| TCTTCTTCTTTGACAGTAGC+GGG | + | chr7.3:4058445-4058464 | None:intergenic | 40.0% | |
| TGAAGAAAAAGGAGACGAAG+AGG | - | chr7.3:4056350-4056369 | MS.gene072541:intron | 40.0% | |
| TGAGGAGGAAGAAGAAACAA+GGG | - | chr7.3:4056590-4056609 | MS.gene072541:CDS | 40.0% | |
| TGATTCCGATGAGGATTATG+TGG | - | chr7.3:4056056-4056075 | MS.gene072541:CDS | 40.0% | |
| TGCTCATTCTTATGGAGAAG+GGG | + | chr7.3:4058264-4058283 | None:intergenic | 40.0% | |
| TGGAATCTCTGCTTACACAA+AGG | + | chr7.3:4057383-4057402 | None:intergenic | 40.0% | |
| TTGCATTATGGAGTGGTCAA+AGG | - | chr7.3:4057343-4057362 | MS.gene072541:CDS | 40.0% | |
| TTTGTAGCTGCTGAACTTGA+CGG | + | chr7.3:4058027-4058046 | None:intergenic | 40.0% | |
| ! | AGCTATATGGCCTGGAATTT+TGG | - | chr7.3:4058342-4058361 | MS.gene072541:intron | 40.0% |
| ! | ATGTGTTCAGAGTGTCATCT+AGG | - | chr7.3:4057629-4057648 | MS.gene072541:intron | 40.0% |
| ! | CAATGATGTTGATGAAGAGG+AGG | - | chr7.3:4056419-4056438 | MS.gene072541:intron | 40.0% |
| ! | CATCTTTTAGTCAAGGGTTC+GGG | - | chr7.3:4057903-4057922 | MS.gene072541:CDS | 40.0% |
| ! | CTATATGGCCTGGAATTTTG+GGG | - | chr7.3:4058344-4058363 | MS.gene072541:intron | 40.0% |
| ! | GCTATATGGCCTGGAATTTT+GGG | - | chr7.3:4058343-4058362 | MS.gene072541:intron | 40.0% |
| ! | TGCTATTTGTTCTGATGGCT+GGG | + | chr7.3:4056911-4056930 | None:intergenic | 40.0% |
| !! | GAACACATAACGGACTCATA+TGG | + | chr7.3:4057617-4057636 | None:intergenic | 40.0% |
| !! | GAGAAGTACCTGAAGGTAAT+TGG | - | chr7.3:4057726-4057745 | MS.gene072541:intron | 40.0% |
| !! | TGATGGGTTTATAGAAGACG+AGG | - | chr7.3:4056161-4056180 | MS.gene072541:CDS | 40.0% |
| AAAGGAGCGATTGCAGTCAA+TGG | - | chr7.3:4058480-4058499 | MS.gene072541:intron | 45.0% | |
| AATGGAAGAGGAAGAGGAAG+AGG | - | chr7.3:4056482-4056501 | MS.gene072541:CDS | 45.0% | |
| ACGATCAACAACAGCAGAAG+AGG | - | chr7.3:4057421-4057440 | MS.gene072541:intron | 45.0% | |
| AGAAGAAGTGGAAGTGGAAG+AGG | - | chr7.3:4056512-4056531 | MS.gene072541:CDS | 45.0% | |
| AGAAGACGAGGATTCGGAAA+AGG | - | chr7.3:4056173-4056192 | MS.gene072541:CDS | 45.0% | |
| AGAAGTAGAAGAAGAGGAGG+AGG | - | chr7.3:4056374-4056393 | MS.gene072541:intron | 45.0% | |
| AGAGGAAGAAGAAGTGGAAG+TGG | - | chr7.3:4056458-4056477 | MS.gene072541:CDS | 45.0% | |
| AGAGGAAGAGGAAGAAGAAG+TGG | - | chr7.3:4056452-4056471 | MS.gene072541:CDS | 45.0% | |
| AGCCAACTGAAGAAGAACTC+AGG | - | chr7.3:4057579-4057598 | MS.gene072541:CDS | 45.0% | |
| AGTAGAGGACTTGAAGAGTG+AGG | - | chr7.3:4057226-4057245 | MS.gene072541:CDS | 45.0% | |
| AGTGGAAATGGAAGAGGAAG+AGG | - | chr7.3:4056476-4056495 | MS.gene072541:CDS | 45.0% | |
| AGTGGAAGTGGAAATGGAAG+AGG | - | chr7.3:4056470-4056489 | MS.gene072541:CDS | 45.0% | |
| ATCAACAACAGCAGAAGAGG+CGG | - | chr7.3:4057424-4057443 | MS.gene072541:intron | 45.0% | |
| ATGGTTGAATCCTGAACCAC+TGG | + | chr7.3:4058298-4058317 | None:intergenic | 45.0% | |
| ATGTTTGATCTGCTGCTGCA+TGG | + | chr7.3:4058403-4058422 | None:intergenic | 45.0% | |
| CAACTTTATCAGAGAGACGG+TGG | - | chr7.3:4057996-4058015 | MS.gene072541:CDS | 45.0% | |
| CACCGTCTCTCTGATAAAGT+TGG | + | chr7.3:4057998-4058017 | None:intergenic | 45.0% | |
| CCAACACAATAAGTGTGTGC+AGG | + | chr7.3:4057698-4057717 | None:intergenic | 45.0% | |
| CCTGCACACACTTATTGTGT+TGG | - | chr7.3:4057695-4057714 | MS.gene072541:intron | 45.0% | |
| CGAAGATTACACAGATGAGG+AGG | - | chr7.3:4056671-4056690 | MS.gene072541:CDS | 45.0% | |
| CGGAAAAGGAGGTGATTCAA+CGG | - | chr7.3:4056187-4056206 | MS.gene072541:CDS | 45.0% | |
| CTCCTGAGTTCTTCTTCAGT+TGG | + | chr7.3:4057584-4057603 | None:intergenic | 45.0% | |
| CTTCTAGCAGAGGTCGAAAA+AGG | - | chr7.3:4056778-4056797 | MS.gene072541:CDS | 45.0% | |
| GAAAGAATGGAGGATCAACG+AGG | - | chr7.3:4056844-4056863 | MS.gene072541:CDS | 45.0% | |
| GAATGTGTCTGATTGTCCAG+AGG | - | chr7.3:4056095-4056114 | MS.gene072541:CDS | 45.0% | |
| GAGAAAGAGGGTTAGGTCAA+AGG | - | chr7.3:4056020-4056039 | MS.gene072541:CDS | 45.0% | |
| GAGGAGGAAGAAGAAACAAG+GGG | - | chr7.3:4056591-4056610 | MS.gene072541:CDS | 45.0% | |
| GATCAGTCCTGAAAAGGAGA+AGG | - | chr7.3:4056937-4056956 | MS.gene072541:CDS | 45.0% | |
| GCTTTGCTTGCATTATGGAG+TGG | - | chr7.3:4057336-4057355 | MS.gene072541:CDS | 45.0% | |
| GGAAAAGGAGGTGATTCAAC+GGG | - | chr7.3:4056188-4056207 | MS.gene072541:CDS | 45.0% | |
| GGAAGAAGTAGAAGAAGAGG+AGG | - | chr7.3:4056371-4056390 | MS.gene072541:intron | 45.0% | |
| GGACGAAGATTACACAGATG+AGG | - | chr7.3:4056668-4056687 | MS.gene072541:CDS | 45.0% | |
| GGGTCTCCATTCTGCATAAA+TGG | + | chr7.3:4058244-4058263 | None:intergenic | 45.0% | |
| GTGTGGAATTTGTCTGTCTG+AGG | - | chr7.3:4057262-4057281 | MS.gene072541:CDS | 45.0% | |
| GTTGATGTCCCCAAAATTCC+AGG | + | chr7.3:4058355-4058374 | None:intergenic | 45.0% | |
| GTTTCTGCAACTTCTAGCAG+AGG | - | chr7.3:4056768-4056787 | MS.gene072541:CDS | 45.0% | |
| TATGTGGTTTCGGATGATGC+CGG | - | chr7.3:4056072-4056091 | MS.gene072541:CDS | 45.0% | |
| TCTGTGTAATCTTCGTCCTC+CGG | + | chr7.3:4056666-4056685 | None:intergenic | 45.0% | |
| TGGACAATCAGACACATTCC+CGG | + | chr7.3:4056094-4056113 | None:intergenic | 45.0% | |
| TGGTTGAATCCTGAACCACT+GGG | + | chr7.3:4058297-4058316 | None:intergenic | 45.0% | |
| TGGTTGTAGACCAGTTGCTT+TGG | - | chr7.3:4057757-4057776 | MS.gene072541:CDS | 45.0% | |
| TGTTTGATCTGCTGCTGCAT+GGG | + | chr7.3:4058402-4058421 | None:intergenic | 45.0% | |
| ! | ACTATCGGTGTTTCAGCTAC+CGG | - | chr7.3:4058094-4058113 | MS.gene072541:CDS | 45.0% |
| ! | CTGCTATTTGTTCTGATGGC+TGG | + | chr7.3:4056912-4056931 | None:intergenic | 45.0% |
| ! | GGATAACCCTTCTCCTTTTC+AGG | + | chr7.3:4056947-4056966 | None:intergenic | 45.0% |
| ! | GTATATGAACAGGTGATGGC+CGG | + | chr7.3:4057844-4057863 | None:intergenic | 45.0% |
| ! | GTGCAGGCTTACTGATTGTT+TGG | + | chr7.3:4057403-4057422 | None:intergenic | 45.0% |
| ! | TATATGAACAGGTGATGGCC+GGG | + | chr7.3:4057843-4057862 | None:intergenic | 45.0% |
| ! | TGTTCAGAGTGTCATCTAGG+TGG | - | chr7.3:4057632-4057651 | MS.gene072541:intron | 45.0% |
| ! | TGTTGATGAAGAGGAGGATG+AGG | - | chr7.3:4056425-4056444 | MS.gene072541:intron | 45.0% |
| !! | TGGTTCTGATGATTCCGATG+AGG | - | chr7.3:4056047-4056066 | MS.gene072541:CDS | 45.0% |
| !!! | CGGCTGAGGATAGTTTTGAT+GGG | - | chr7.3:4056145-4056164 | MS.gene072541:CDS | 45.0% |
| !!! | TTTTCTGGCAGAAGTACCGA+AGG | - | chr7.3:4057944-4057963 | MS.gene072541:CDS | 45.0% |
| ACTCGAGCACAATACGAGTG+AGG | - | chr7.3:4058819-4058838 | MS.gene072541:CDS | 50.0% | |
| AGACATCGGAGAAGCTCCTT+CGG | + | chr7.3:4057963-4057982 | None:intergenic | 50.0% | |
| AGACGAGGATTCGGAAAAGG+AGG | - | chr7.3:4056176-4056195 | MS.gene072541:CDS | 50.0% | |
| AGAGGACTTGAAGAGTGAGG+TGG | - | chr7.3:4057229-4057248 | MS.gene072541:CDS | 50.0% | |
| AGCAGAGGTCGAAAAAGGAG+TGG | - | chr7.3:4056783-4056802 | MS.gene072541:CDS | 50.0% | |
| AGCCGGAATTGGCATCTTCA+AGG | + | chr7.3:4056968-4056987 | None:intergenic | 50.0% | |
| ATGTGGTTTCGGATGATGCC+GGG | - | chr7.3:4056073-4056092 | MS.gene072541:CDS | 50.0% | |
| CACGAAGATGGGCAAGAAGA+AGG | - | chr7.3:4056731-4056750 | MS.gene072541:CDS | 50.0% | |
| CATACCATACTCGCTGCTTG+TGG | - | chr7.3:4058796-4058815 | MS.gene072541:CDS | 50.0% | |
| CGAGGGCTAAAACTGGTGTA+AGG | - | chr7.3:4056229-4056248 | MS.gene072541:intron | 50.0% | |
| GAAGAGTGAGGTGGGAAAAC+AGG | - | chr7.3:4057238-4057257 | MS.gene072541:CDS | 50.0% | |
| GAAGTGGAAGTGGAAGAGGT+AGG | - | chr7.3:4056516-4056535 | MS.gene072541:CDS | 50.0% | |
| GAGGACTTGAAGAGTGAGGT+GGG | - | chr7.3:4057230-4057249 | MS.gene072541:CDS | 50.0% | |
| GAGGAGAGCTTCTCTTCGAA+TGG | - | chr7.3:4057094-4057113 | MS.gene072541:CDS | 50.0% | |
| GAGGTGAAGACATCAGGTTC+AGG | + | chr7.3:4057880-4057899 | None:intergenic | 50.0% | |
| GGCCATATAGCTGCATTCAC+AGG | + | chr7.3:4058334-4058353 | None:intergenic | 50.0% | |
| GGCCTGTGAATGCAGCTATA+TGG | - | chr7.3:4058329-4058348 | MS.gene072541:intron | 50.0% | |
| GTGAATGCAGCTATATGGCC+TGG | - | chr7.3:4058334-4058353 | MS.gene072541:intron | 50.0% | |
| TCTAGACTCGCAATCTGAGC+CGG | + | chr7.3:4056985-4057004 | None:intergenic | 50.0% | |
| TCTGCTGTTGTTGATCGTGC+AGG | + | chr7.3:4057419-4057438 | None:intergenic | 50.0% | |
| TGATGAAGAGGAGGATGAGG+AGG | - | chr7.3:4056428-4056447 | MS.gene072541:intron | 50.0% | |
| TGTCATCTAGGTGGAGACGA+TGG | - | chr7.3:4057641-4057660 | MS.gene072541:intron | 50.0% | |
| ! | AAACTGGTGTAAGGCGTCAG+CGG | - | chr7.3:4056238-4056257 | MS.gene072541:intron | 50.0% |
| ! | TTTTCCTTACCCTTCCGTGC+TGG | + | chr7.3:4057170-4057189 | None:intergenic | 50.0% |
| !! | TTGGGGAGAGAAGTACCTGA+AGG | - | chr7.3:4057719-4057738 | MS.gene072541:intron | 50.0% |
| !!! | GCGGCTGAGGATAGTTTTGA+TGG | - | chr7.3:4056144-4056163 | MS.gene072541:CDS | 50.0% |
| AACCCTCTGTCTCTTCCTCG+AGG | + | chr7.3:4056280-4056299 | None:intergenic | 55.0% | |
| AAGCCTCGAGGAAGAGACAG+AGG | - | chr7.3:4056274-4056293 | MS.gene072541:intron | 55.0% | |
| ACAAGTGCCCGAACGTGATC+AGG | - | chr7.3:4057451-4057470 | MS.gene072541:intron | 55.0% | |
| AGAACAGGTGAGAGAAGCCG+TGG | - | chr7.3:4057043-4057062 | MS.gene072541:CDS | 55.0% | |
| AGAGAAGCCGTGGAGTTGTG+TGG | - | chr7.3:4057053-4057072 | MS.gene072541:CDS | 55.0% | |
| AGAGGAGGATGAGGAGGAAG+AGG | - | chr7.3:4056434-4056453 | MS.gene072541:intron | 55.0% | |
| AGCAATGGAAGCCTCCAGCA+CGG | - | chr7.3:4057153-4057172 | MS.gene072541:CDS | 55.0% | |
| AGCCTCGAGGAAGAGACAGA+GGG | - | chr7.3:4056275-4056294 | MS.gene072541:intron | 55.0% | |
| AGGGTTAGGTCAAAGGGCAG+TGG | - | chr7.3:4056027-4056046 | MS.gene072541:CDS | 55.0% | |
| CAACTCAAAGCCTGCCTTCC+CGG | - | chr7.3:4057822-4057841 | MS.gene072541:CDS | 55.0% | |
| CACAGGCCCGTTCGAAAACA+TGG | + | chr7.3:4058317-4058336 | None:intergenic | 55.0% | |
| CTCGCAATCTGAGCCGGAAT+TGG | + | chr7.3:4056979-4056998 | None:intergenic | 55.0% | |
| CTTCTCCGATGTCTGGAGGT+GGG | - | chr7.3:4057969-4057988 | MS.gene072541:CDS | 55.0% | |
| GAAGGAGCTTCTCCGATGTC+TGG | - | chr7.3:4057962-4057981 | MS.gene072541:CDS | 55.0% | |
| GAGGTGGGAAAACAGGTGTG+TGG | - | chr7.3:4057245-4057264 | MS.gene072541:CDS | 55.0% | |
| GAGTCCACAAGCAGCGAGTA+TGG | + | chr7.3:4058803-4058822 | None:intergenic | 55.0% | |
| GGATGAGGAGGAAGAGGAAG+AGG | - | chr7.3:4056440-4056459 | MS.gene072541:intron | 55.0% | |
| TCAATGTGGGGACAGACGGA+TGG | + | chr7.3:4058862-4058881 | None:intergenic | 55.0% | |
| TTCTCCGATGTCTGGAGGTG+GGG | - | chr7.3:4057970-4057989 | MS.gene072541:CDS | 55.0% | |
| TTGATCTGCTGCTGCATGGG+TGG | + | chr7.3:4058399-4058418 | None:intergenic | 55.0% | |
| TTTGGATGGATGTGCGGCTG+AGG | - | chr7.3:4056131-4056150 | MS.gene072541:CDS | 55.0% | |
| ATGGAAGCCTCCAGCACGGA+AGG | - | chr7.3:4057157-4057176 | MS.gene072541:CDS | 60.0% | |
| ATGTGGGGACAGACGGATGG+TGG | + | chr7.3:4058859-4058878 | None:intergenic | 60.0% | |
| CTGCTGCTGCATGGGTGGAT+TGG | + | chr7.3:4058394-4058413 | None:intergenic | 60.0% | |
| GAGCAATTCAAGGGGCCCAG+TGG | - | chr7.3:4058279-4058298 | MS.gene072541:intron | 60.0% | |
| GCTTCTCCGATGTCTGGAGG+TGG | - | chr7.3:4057968-4057987 | MS.gene072541:CDS | 60.0% | |
| GGAGCTTCTCCGATGTCTGG+AGG | - | chr7.3:4057965-4057984 | MS.gene072541:CDS | 60.0% | |
| TCCTTACCCTTCCGTGCTGG+AGG | + | chr7.3:4057167-4057186 | None:intergenic | 60.0% | |
| TGGAAGCCTCCAGCACGGAA+GGG | - | chr7.3:4057158-4057177 | MS.gene072541:CDS | 60.0% | |
| TTCAAGGGGCCCAGTGGTTC+AGG | - | chr7.3:4058285-4058304 | MS.gene072541:intron | 60.0% | |
| ! | TGAACAGGTGATGGCCGGGA+AGG | + | chr7.3:4057839-4057858 | None:intergenic | 60.0% |
| GCCTCCAGCACGGAAGGGTA+AGG | - | chr7.3:4057163-4057182 | MS.gene072541:CDS | 65.0% | |
| GGTGCCCCACCTCCAGACAT+CGG | + | chr7.3:4057977-4057996 | None:intergenic | 65.0% | |
| ! | TGGGGACAGACGGATGGTGG+AGG | + | chr7.3:4058856-4058875 | None:intergenic | 65.0% |
| ! | CAGGTGATGGCCGGGAAGGC+AGG | + | chr7.3:4057835-4057854 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4055982 | 4059014 | 4055982 | ID=MS.gene072541 |
| chr7.3 | mRNA | 4055982 | 4059014 | 4055982 | ID=MS.gene072541.t1;Parent=MS.gene072541 |
| chr7.3 | exon | 4058730 | 4059014 | 4058730 | ID=MS.gene072541.t1.exon1;Parent=MS.gene072541.t1 |
| chr7.3 | CDS | 4058730 | 4059014 | 4058730 | ID=cds.MS.gene072541.t1;Parent=MS.gene072541.t1 |
| chr7.3 | exon | 4057737 | 4058234 | 4057737 | ID=MS.gene072541.t1.exon2;Parent=MS.gene072541.t1 |
| chr7.3 | CDS | 4057737 | 4058234 | 4057737 | ID=cds.MS.gene072541.t1;Parent=MS.gene072541.t1 |
| chr7.3 | exon | 4057524 | 4057631 | 4057524 | ID=MS.gene072541.t1.exon3;Parent=MS.gene072541.t1 |
| chr7.3 | CDS | 4057524 | 4057631 | 4057524 | ID=cds.MS.gene072541.t1;Parent=MS.gene072541.t1 |
| chr7.3 | exon | 4056452 | 4057424 | 4056452 | ID=MS.gene072541.t1.exon4;Parent=MS.gene072541.t1 |
| chr7.3 | CDS | 4056452 | 4057424 | 4056452 | ID=cds.MS.gene072541.t1;Parent=MS.gene072541.t1 |
| chr7.3 | exon | 4055982 | 4056238 | 4055982 | ID=MS.gene072541.t1.exon5;Parent=MS.gene072541.t1 |
| chr7.3 | CDS | 4055982 | 4056238 | 4055982 | ID=cds.MS.gene072541.t1;Parent=MS.gene072541.t1 |
| Gene Sequence |
| Protein sequence |
