AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072669


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072669.t1 MTR_7g110000 94.475 724 7 2 1 691 1 724 0.0 1392
MS.gene072669.t1 MTR_3g077670 70.555 703 155 9 1 665 1 689 0.0 940
MS.gene072669.t1 MTR_2g032690 71.186 649 152 3 1 616 1 647 0.0 930
MS.gene072669.t1 MTR_3g107730 54.745 685 245 8 7 647 4 667 0.0 729
MS.gene072669.t1 MTR_0459s0020 56.231 658 236 8 1 617 9 655 0.0 726
MS.gene072669.t1 MTR_1g011840 52.688 651 254 5 7 617 3 639 0.0 691
MS.gene072669.t1 MTR_3g107730 58.700 523 173 4 7 499 4 513 0.0 631
MS.gene072669.t1 MTR_0366s0020 51.145 655 190 7 1 617 9 571 0.0 625
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072669.t1 AT3G62270 78.255 699 107 6 1 664 1 689 0.0 1095
MS.gene072669.t1 AT2G47160 76.283 721 120 8 1 687 1 704 0.0 1077
MS.gene072669.t1 AT2G47160 78.852 662 119 7 30 687 85 729 0.0 1026
MS.gene072669.t1 AT3G06450 68.421 646 163 6 3 614 5 643 0.0 905
MS.gene072669.t1 AT3G06450 68.421 646 163 6 3 614 5 643 0.0 905
MS.gene072669.t1 AT3G06450 68.421 646 163 6 3 614 5 643 0.0 905
MS.gene072669.t1 AT3G06450 68.421 646 163 6 3 614 5 643 0.0 905
MS.gene072669.t1 AT1G15460 56.410 663 244 8 8 630 13 670 0.0 761
MS.gene072669.t1 AT1G15460 56.410 663 244 8 8 630 13 670 0.0 761
MS.gene072669.t1 AT1G15460 58.456 609 218 4 8 585 13 617 0.0 746
MS.gene072669.t1 AT1G74810 54.103 658 257 6 1 617 1 654 0.0 729
MS.gene072669.t1 AT1G74810 54.103 658 257 6 1 617 1 654 0.0 729
MS.gene072669.t1 AT1G74810 54.103 658 257 6 1 617 1 654 0.0 729
MS.gene072669.t1 AT5G25430 53.582 670 253 11 7 631 9 665 0.0 712
MS.gene072669.t1 AT1G74810 57.483 588 240 4 36 617 39 622 0.0 706
MS.gene072669.t1 AT1G74810 57.483 588 240 4 36 617 39 622 0.0 706
MS.gene072669.t1 AT4G32510 50.803 685 277 7 1 635 1 675 0.0 692
MS.gene072669.t1 AT4G32510 51.187 674 270 6 1 625 1 664 0.0 692
MS.gene072669.t1 AT1G15460 58.172 569 223 7 72 630 1 564 0.0 676
MS.gene072669.t1 AT1G74810 56.341 552 231 4 72 617 1 548 0.0 647
MS.gene072669.t1 AT1G74810 55.728 515 218 4 109 617 1 511 0.0 588

Find 169 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGGCTACTTTGCCTTTA+TGG 0.123064 7.3:-5068638 MS.gene072669:CDS
TCATTATGATTTGCTCCTTT+TGG 0.138425 7.3:-5069777 MS.gene072669:CDS
AATATTGCTATTGTCTTAAA+AGG 0.159285 7.3:+5068397 None:intergenic
ACATTATTGTGTGGCCTTAT+TGG 0.170662 7.3:-5069306 MS.gene072669:CDS
GTTCCTGTTGTGTTCATAAT+TGG 0.189623 7.3:-5069908 MS.gene072669:CDS
TTGTCTTGGTGTTTGGAATC+AGG 0.217098 7.3:+5067697 None:intergenic
ATTTATCTATTTATATGTTT+TGG 0.242133 7.3:-5068358 MS.gene072669:CDS
TGCTTTGATACTATTCTTAC+TGG 0.270594 7.3:-5070788 MS.gene072669:CDS
ACCTGACAATCTCATTTCTT+TGG 0.287431 7.3:+5067741 None:intergenic
CTATTCTTACTGGCCATCTT+AGG 0.291093 7.3:-5070778 MS.gene072669:CDS
CTTTCCCAAAACTGGTTTCC+AGG 0.295534 7.3:+5068601 None:intergenic
TAAACTTTCAATTGCCATAA+AGG 0.296865 7.3:+5068624 None:intergenic
AATACCAACTTCAGTACTTT+GGG 0.301075 7.3:-5068656 MS.gene072669:CDS
TTATTTCTTGTCTTGGTGTT+TGG 0.301293 7.3:+5067690 None:intergenic
CATTCAAGCAGCTACAAGTA+TGG 0.304452 7.3:-5068833 MS.gene072669:CDS
AAAGGATCCTTTCCCAAAAC+TGG 0.307317 7.3:+5068593 None:intergenic
AATCTCATTTCTTTGGTCAT+TGG 0.313846 7.3:+5067748 None:intergenic
TTCGCTTTGGTCCTTTCATT+TGG 0.315725 7.3:-5070428 MS.gene072669:CDS
GTTTACCTGGAAACCAGTTT+TGG 0.316421 7.3:-5068606 MS.gene072669:CDS
GCTTTCGTATCTTCCCTCTT+TGG 0.317423 7.3:+5070491 None:intergenic
GCGCCGGGCGACCACGGATT+TGG 0.326784 7.3:+5070079 None:intergenic
GGAGTGGAGCTATTGATCTT+TGG 0.338665 7.3:+5067886 None:intergenic
CGACTATGGTGTGCCACTTA+TGG 0.341912 7.3:-5070176 MS.gene072669:CDS
CTTGCTTCCTGTTGAGGTTA+AGG 0.342949 7.3:-5068752 MS.gene072669:CDS
TCCTTTGATGATCATGCTCT+TGG 0.344685 7.3:-5068302 MS.gene072669:CDS
CTTCGTGGAGGTTTGCTAAT+GGG 0.346782 7.3:-5070454 MS.gene072669:CDS
AAAACATATAAATAGATAAA+TGG 0.347506 7.3:+5068360 None:intergenic
CAAGAAGCCGTGGTGAATTT+AGG 0.358792 7.3:-5067924 MS.gene072669:CDS
CCTTCGTGGAGGTTTGCTAA+TGG 0.359784 7.3:-5070455 MS.gene072669:CDS
AACCGCTTTACCCGAATTGC+GGG 0.360056 7.3:-5070739 MS.gene072669:CDS
TTGGGTAGAAACCTGTTTCT+TGG 0.364718 7.3:-5071274 MS.gene072669:CDS
TCTTAAATTATTTCTTGTCT+TGG 0.364780 7.3:+5067683 None:intergenic
GCTAGTTTAGGACAGTTATA+TGG 0.368479 7.3:-5069045 MS.gene072669:CDS
TGCCACTTATGGTCCTAGTT+TGG 0.369045 7.3:-5070165 MS.gene072669:CDS
CGCCCGGCGCCTATGACAAT+TGG 0.370935 7.3:-5070066 MS.gene072669:CDS
CGTTGTTCCTTAACCTCAAC+AGG 0.372694 7.3:+5068745 None:intergenic
CAAACAACTCTCCCGCAATT+CGG 0.374938 7.3:+5070728 None:intergenic
CGAATTGCGGGAGAGTTGTT+TGG 0.375063 7.3:-5070727 MS.gene072669:CDS
TTGCAGGAGGAATTCCAATA+AGG 0.379495 7.3:+5069292 None:intergenic
TTCTTTGGTCATTGGACTGT+TGG 0.381083 7.3:+5067756 None:intergenic
GGGAGAAAGTATTGTCTTAG+TGG 0.386465 7.3:+5068277 None:intergenic
TTAGGATCATTTCTTGGTGT+TGG 0.387898 7.3:+5067865 None:intergenic
AAATACCAACTTCAGTACTT+TGG 0.388661 7.3:-5068657 MS.gene072669:CDS
TGCTAATGGGATGTTCGCTT+TGG 0.391611 7.3:-5070441 MS.gene072669:CDS
GGAGCTGGTGCTTCTCATAT+TGG 0.397606 7.3:-5067976 MS.gene072669:CDS
ATTTACTTGTATCTTCTGCT+TGG 0.404528 7.3:+5068556 None:intergenic
GCACACCATAGTCGGCTATA+AGG 0.404541 7.3:+5070185 None:intergenic
ATCAGTAAGAATGCTAGTTT+AGG 0.405750 7.3:-5069057 MS.gene072669:CDS
CATACTTGTAGCTGCTTGAA+TGG 0.407531 7.3:+5068834 None:intergenic
CAGCTGCATCCAAGTCTTGA+AGG 0.411041 7.3:+5068233 None:intergenic
TGCTAAAGAAAGACCTGAGT+TGG 0.415592 7.3:-5071293 MS.gene072669:CDS
TGACAATTGGACTGTTGTTA+AGG 0.418583 7.3:-5070053 MS.gene072669:intron
ATATAAATAGATAAATGGTT+TGG 0.420632 7.3:+5068365 None:intergenic
AACCTGTTTCTTGGATGGGC+TGG 0.422896 7.3:-5071265 MS.gene072669:CDS
AGGCGCCTTGGGATACCGTT+TGG 0.423298 7.3:+5070109 None:intergenic
TGTCTTGGTGTTTGGAATCA+GGG 0.423999 7.3:+5067698 None:intergenic
TTGGACTAAAGAGGCGCCTT+GGG 0.427252 7.3:+5070098 None:intergenic
ACCAAAGAAATGAGATTGTC+AGG 0.428973 7.3:-5067742 MS.gene072669:CDS
CTAACTTGGGTACCTATTGC+TGG 0.436565 7.3:-5068334 MS.gene072669:CDS
TGTGGTATGACTCCATTTGC+AGG 0.439053 7.3:+5069276 None:intergenic
AGCACTGCAATCATAGTTGC+TGG 0.439606 7.3:+5069875 None:intergenic
GGAAACATGACTCCAGCAAT+AGG 0.440092 7.3:+5068322 None:intergenic
TTGGTGCAGTGAAGAGTAAA+AGG 0.440613 7.3:+5068575 None:intergenic
AAACAACTCTCCCGCAATTC+GGG 0.442782 7.3:+5070729 None:intergenic
AGTCCTCGGTCTGGCGTAAG+AGG 0.444825 7.3:-5067781 MS.gene072669:CDS
TAACTTGCTTCAATCAGTAT+TGG 0.448829 7.3:-5068716 MS.gene072669:CDS
GTAGAAACCTGTTTCTTGGA+TGG 0.449097 7.3:-5071270 MS.gene072669:CDS
ATTGGAATTCCTCCTGCAAA+TGG 0.450026 7.3:-5069288 MS.gene072669:CDS
ATCCAGCCCATCCAAGAAAC+AGG 0.452822 7.3:+5071263 None:intergenic
CTTTAACTACAGGTTGGCTT+CGG 0.453709 7.3:-5070210 MS.gene072669:intron
TAATGTGCTACAAGCAAGAT+TGG 0.456259 7.3:-5071837 MS.gene072669:CDS
CTTCAATCAGTATTGGTTGG+AGG 0.463638 7.3:-5068709 MS.gene072669:CDS
AAGGCTAGATCATGGCGTTA+TGG 0.470484 7.3:-5070377 MS.gene072669:CDS
ATGGCAATTGAAAGTTTACC+TGG 0.470571 7.3:-5068619 MS.gene072669:CDS
GCTCCAATTATGAACACAAC+AGG 0.475392 7.3:+5069905 None:intergenic
ATCATTTCTTGGTGTTGGAG+TGG 0.476671 7.3:+5067870 None:intergenic
CTTGGATGCAGCTGAGTATG+AGG 0.477776 7.3:-5068224 MS.gene072669:CDS
TTTGGACTAAAGAGGCGCCT+TGG 0.478346 7.3:+5070097 None:intergenic
TCTAGCAACTCTTAAACATC+AGG 0.479084 7.3:-5069232 MS.gene072669:intron
CGGAGCCTTATAGCCGACTA+TGG 0.480808 7.3:-5070190 MS.gene072669:CDS
GGCATTATACACTCAATCAT+TGG 0.482191 7.3:-5071385 MS.gene072669:CDS
AGTCCAAATCCGTGGTCGCC+CGG 0.483928 7.3:-5070082 MS.gene072669:CDS
TTGCTTCAATCAGTATTGGT+TGG 0.485493 7.3:-5068712 MS.gene072669:CDS
TAAGAGGTGTCTGCATTTGA+TGG 0.489462 7.3:+5069004 None:intergenic
TAGAAACCTGTTTCTTGGAT+GGG 0.489881 7.3:-5071269 MS.gene072669:CDS
TCGGGTAAAGCGGTTGATGA+TGG 0.490490 7.3:+5070747 None:intergenic
AGACGACTTGCTTCCTGTTG+AGG 0.494310 7.3:-5068758 MS.gene072669:CDS
GAGCAAATCATAATGATAAG+AGG 0.503024 7.3:+5069784 None:intergenic
GAGAATTAAAAGAGAGGTGC+GGG 0.503560 7.3:+5067830 None:intergenic
GCTAAAGAAAGACCTGAGTT+GGG 0.505588 7.3:-5071292 MS.gene072669:CDS
AGATCATGGCGTTATGGTAG+TGG 0.507525 7.3:-5070371 MS.gene072669:intron
CTTATGGTCCTAGTTTGGAC+AGG 0.509478 7.3:-5070160 MS.gene072669:CDS
AGAAATGAGATTGTCAGGTA+GGG 0.510643 7.3:-5067737 MS.gene072669:CDS
AACAACAGTCCAATTGTCAT+AGG 0.516200 7.3:+5070057 None:intergenic
AAGAGAGGTGCGGGCTCAGA+CGG 0.517099 7.3:+5067839 None:intergenic
CAGCAATCTGAGTTTGGAGC+TGG 0.517149 7.3:-5067991 MS.gene072669:intron
AAGAAATGAGATTGTCAGGT+AGG 0.518072 7.3:-5067738 MS.gene072669:CDS
AGTCCAATTGTCATAGGCGC+CGG 0.518211 7.3:+5070063 None:intergenic
AGGACACACCTGTCCAAACT+AGG 0.523221 7.3:+5070152 None:intergenic
GAAGGGTCCTGGTAAATAAG+AGG 0.523540 7.3:+5068988 None:intergenic
TAGCCCCAAAGTACTGAAGT+TGG 0.525039 7.3:+5068652 None:intergenic
TTACTCGAGCAGAAGGGTCC+TGG 0.527068 7.3:+5068977 None:intergenic
TCAAATATAGTCTCATCGAC+CGG 0.529909 7.3:+5068796 None:intergenic
ACTGAGCAAAGTCCTCGGTC+TGG 0.531263 7.3:-5067790 MS.gene072669:CDS
GTCCAATTGTCATAGGCGCC+GGG 0.533568 7.3:+5070064 None:intergenic
TATGGGAAACGTGGATGCCC+CGG 0.533589 7.3:-5068815 MS.gene072669:CDS
ACATATTGAAGTTGATGCCA+AGG 0.539736 7.3:+5071408 None:intergenic
CAAATATAGTCTCATCGACC+GGG 0.540975 7.3:+5068797 None:intergenic
GCTAGACTCTTTGTATGCAT+CGG 0.543376 7.3:+5069249 None:intergenic
GCCACTCCTAAAATCAGTAA+AGG 0.544686 7.3:+5071355 None:intergenic
GATCGACTTACTCGAGCAGA+AGG 0.551281 7.3:+5068970 None:intergenic
TCATTCTTGATACCTTCAAA+AGG 0.552421 7.3:+5071874 None:intergenic
TCTAACAGCTGTTCAAACCT+TGG 0.553634 7.3:-5071425 MS.gene072669:CDS
GTCCAAACTAGGACCATAAG+TGG 0.562627 7.3:+5070163 None:intergenic
ATTCAAGCAGCTACAAGTAT+GGG 0.564842 7.3:-5068832 MS.gene072669:CDS
TGCTACAAGCAAGATTGGAC+AGG 0.567931 7.3:-5071832 MS.gene072669:CDS
GGTATCAAGAATGATCTAAG+AGG 0.570702 7.3:-5071865 MS.gene072669:CDS
AGGTGCACACCTTCAAGACT+TGG 0.572324 7.3:-5068242 MS.gene072669:CDS
CTTACTGATGCAAGGTTGAA+CGG 0.572769 7.3:+5068187 None:intergenic
TGAGTTTCGCATACCAAAGA+GGG 0.573302 7.3:-5070504 MS.gene072669:CDS
TGGACAGGTGGAATCAAAGC+AGG 0.574832 7.3:-5071817 MS.gene072669:intron
GAAATGAGATTGTCAGGTAG+GGG 0.575756 7.3:-5067736 MS.gene072669:CDS
TAAGGAGAAGGCCAAATGAA+AGG 0.576331 7.3:+5070417 None:intergenic
CAACCGCTTTACCCGAATTG+CGG 0.578492 7.3:-5070740 MS.gene072669:CDS
ACCAAGAGCATGATCATCAA+AGG 0.580024 7.3:+5068301 None:intergenic
GATGGAACATGCTCCTAAGA+TGG 0.580149 7.3:+5070765 None:intergenic
TGTTTCTTGGATGGGCTGGA+TGG 0.584884 7.3:-5071261 MS.gene072669:intron
AAAGCAGAAAGGCTAGATCA+TGG 0.585011 7.3:-5070385 MS.gene072669:CDS
TTGGCATCAACTTCAATATG+TGG 0.585839 7.3:-5071406 MS.gene072669:CDS
TGCTGGAAGACATTATTGTG+TGG 0.586710 7.3:-5069315 MS.gene072669:intron
CATAAGTGGCACACCATAGT+CGG 0.587251 7.3:+5070177 None:intergenic
GCAGACACCTCTTATTTACC+AGG 0.589449 7.3:-5068995 MS.gene072669:CDS
TACGAAATCTTACTGATGCA+AGG 0.591093 7.3:+5068179 None:intergenic
ACCACGGATTTGGACTAAAG+AGG 0.593964 7.3:+5070089 None:intergenic
TGTTTGGAATCAGGGTTGAG+AGG 0.594019 7.3:+5067706 None:intergenic
AACAGGTTTCTACCCAACTC+AGG 0.597836 7.3:+5071280 None:intergenic
TCATAGGCGCCGGGCGACCA+CGG 0.600175 7.3:+5070073 None:intergenic
GTCATTGTGTCAGGGACTCG+TGG 0.604174 7.3:-5070528 MS.gene072669:intron
GGTGCTTCTCATATTGGAGA+AGG 0.606762 7.3:-5067970 MS.gene072669:CDS
CTCCCGCAATTCGGGTAAAG+CGG 0.606782 7.3:+5070737 None:intergenic
TCGCGACTGAGCAAAGTCCT+CGG 0.608512 7.3:-5067795 MS.gene072669:CDS
AAATCATAATGATAAGAGGA+TGG 0.616364 7.3:+5069788 None:intergenic
ATACCAACTTCAGTACTTTG+GGG 0.618229 7.3:-5068655 MS.gene072669:CDS
CTTACTGATACTGTTTCGAG+CGG 0.622907 7.3:+5069071 None:intergenic
TCAAGAATGATCTAAGAGGA+AGG 0.623945 7.3:-5071861 MS.gene072669:CDS
GTGTTCCAAACGGTATCCCA+AGG 0.628714 7.3:-5070114 MS.gene072669:CDS
TGCAAGGTTGAACGGTAAAG+CGG 0.629157 7.3:+5068195 None:intergenic
AATGTGTACATGATCACAGT+AGG 0.629188 7.3:+5071328 None:intergenic
CGAGAATTAAAAGAGAGGTG+CGG 0.634346 7.3:+5067829 None:intergenic
GAAGTTATCACAAGAAGCCG+TGG 0.642922 7.3:-5067934 MS.gene072669:CDS
ATTATACACTCAATCATTGG+TGG 0.645714 7.3:-5071382 MS.gene072669:CDS
CCGTTTGGAACACTTGCAGT+CGG 0.647413 7.3:+5070124 None:intergenic
CCGACTGCAAGTGTTCCAAA+CGG 0.649059 7.3:-5070124 MS.gene072669:CDS
TACAAGCAAGATTGGACAGG+TGG 0.649360 7.3:-5071829 MS.gene072669:CDS
CCCCACGAGAATTAAAAGAG+AGG 0.650516 7.3:+5067824 None:intergenic
CTGTTTCAACAAAAGTAGCA+TGG 0.650562 7.3:+5068422 None:intergenic
GCCTCTTTAGTCCAAATCCG+TGG 0.651698 7.3:-5070090 MS.gene072669:CDS
TTTGTATGCATCGGAGACTG+TGG 0.655466 7.3:+5069258 None:intergenic
ATCGACTTACTCGAGCAGAA+GGG 0.656100 7.3:+5068971 None:intergenic
ATGAGTTTCGCATACCAAAG+AGG 0.658659 7.3:-5070505 MS.gene072669:CDS
TGTGACAATGATTAGGCACA+AGG 0.668999 7.3:-5068880 MS.gene072669:intron
AACACTTGCAGTCGGCGTGT+AGG 0.674908 7.3:+5070132 None:intergenic
AGCTACAAGTATGGGAAACG+TGG 0.675908 7.3:-5068824 MS.gene072669:CDS
AAATATAGTCTCATCGACCG+GGG 0.685107 7.3:+5068798 None:intergenic
GTGCCTCTTACGCCAGACCG+AGG 0.694511 7.3:+5067778 None:intergenic
TAGTATGCCTAAATTCACCA+CGG 0.697327 7.3:+5067917 None:intergenic
GGTATGACTCCATTTGCAGG+AGG 0.716901 7.3:+5069279 None:intergenic
CCATTAGCAAACCTCCACGA+AGG 0.724265 7.3:+5070455 None:intergenic
AAAGCTGAGATGCTACACTG+TGG 0.852270 7.3:+5069840 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATATAAATAGATAAA+TGG + chr7.3:5071225-5071244 None:intergenic 10.0%
!! TAAACGTATATATATTAAAT+TGG + chr7.3:5071070-5071089 None:intergenic 10.0%
!!! ATTTAACTATAAGTATATTT+TGG - chr7.3:5068047-5068066 MS.gene072669:intron 10.0%
!!! ATTTATCTATTTATATGTTT+TGG - chr7.3:5071224-5071243 MS.gene072669:intron 10.0%
!!! TAAGAAAATAAATTTTAAGA+AGG + chr7.3:5070643-5070662 None:intergenic 10.0%
!! AACATTGTTTATTAAAAAGA+TGG - chr7.3:5069583-5069602 MS.gene072669:intron 15.0%
!! ATATAAATAGATAAATGGTT+TGG + chr7.3:5071220-5071239 None:intergenic 15.0%
!! TATGAAAGTTATATTTCAAT+TGG + chr7.3:5067901-5067920 None:intergenic 15.0%
!!! AAATTTTCTTTTAATGTGTA+GGG - chr7.3:5071124-5071143 MS.gene072669:intron 15.0%
!!! AATAAATTTTAAGAAGGTTT+AGG + chr7.3:5070637-5070656 None:intergenic 15.0%
!!! ATATTTTTTCATAAAGGAAA+AGG - chr7.3:5068071-5068090 MS.gene072669:intron 15.0%
!!! ATTATTTTCTTGATTTTGTA+GGG - chr7.3:5068758-5068777 MS.gene072669:CDS 15.0%
!!! ATTTATTTAACTTTAACTAC+AGG - chr7.3:5069362-5069381 MS.gene072669:intron 15.0%
!!! TTTGGAATATTTTTTCATAA+AGG - chr7.3:5068065-5068084 MS.gene072669:intron 15.0%
!! AAATAATGAAAACAAGACAA+TGG + chr7.3:5068745-5068764 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr7.3:5069950-5069969 MS.gene072669:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7.3:5069969-5069950 None:intergenic 20.0%
!! ACAATTATCAAAGTTTACAT+TGG - chr7.3:5068923-5068942 MS.gene072669:intron 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7.3:5070156-5070175 MS.gene072669:CDS 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr7.3:5070175-5070156 None:intergenic 20.0%
!! ATTTATCTATCTATCAACAA+AGG - chr7.3:5068976-5068995 MS.gene072669:intron 20.0%
!! CTAAGAGTTAAAAATTAATC+AGG + chr7.3:5070417-5070436 None:intergenic 20.0%
!! TACCATTAGAAAAAGAATTA+AGG + chr7.3:5070232-5070251 None:intergenic 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7.3:5070157-5070176 MS.gene072669:CDS 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr7.3:5070176-5070157 None:intergenic 20.0%
!! TTTAATAAACAATGTTACAG+TGG + chr7.3:5069579-5069598 None:intergenic 20.0%
!! TTTGGATAAACAACTTAATT+AGG - chr7.3:5068413-5068432 MS.gene072669:CDS 20.0%
!!! AATATGTTGGTAAATAACTT+CGG + chr7.3:5069031-5069050 None:intergenic 20.0%
!!! AATATTGCTATTGTCTTAAA+AGG + chr7.3:5071188-5071207 None:intergenic 20.0%
!!! AATGTTTTCATTCATTTTAC+AGG - chr7.3:5067921-5067940 MS.gene072669:CDS 20.0%
!!! AATTAAGTTGTTTATCCAAA+CGG + chr7.3:5068413-5068432 None:intergenic 20.0%
!!! CAAATTTTCTTTTAATGTGT+AGG - chr7.3:5071123-5071142 MS.gene072669:intron 20.0%
!!! CATTATTTTCTTGATTTTGT+AGG - chr7.3:5068757-5068776 MS.gene072669:CDS 20.0%
!!! TAAGTTGAAAAAAAAACCTA+TGG - chr7.3:5068587-5068606 MS.gene072669:CDS 20.0%
!!! TAATTTTGATATATTGTCAG+TGG - chr7.3:5071459-5071478 MS.gene072669:intron 20.0%
! AAAAAATATGTATGTTGTGG+GGG + chr7.3:5067954-5067973 None:intergenic 25.0%
! AAATCATAATGATAAGAGGA+TGG + chr7.3:5069797-5069816 None:intergenic 25.0%
! AAGTTGAAGTTTAATGAACT+AGG + chr7.3:5069863-5069882 None:intergenic 25.0%
! AGCAAAAAATATGTATGTTG+TGG + chr7.3:5067957-5067976 None:intergenic 25.0%
! ATATGTGTGATCTTAAAAGT+AGG - chr7.3:5071518-5071537 MS.gene072669:intron 25.0%
! CAAAAAATATGTATGTTGTG+GGG + chr7.3:5067955-5067974 None:intergenic 25.0%
! GCAAAAAATATGTATGTTGT+GGG + chr7.3:5067956-5067975 None:intergenic 25.0%
! GCTAACATATACTAACTTAA+GGG + chr7.3:5069977-5069996 None:intergenic 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr7.3:5070188-5070207 MS.gene072669:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr7.3:5070207-5070188 None:intergenic 25.0%
! GTTATGATTATTAAGCTTGT+TGG + chr7.3:5071430-5071449 None:intergenic 25.0%
! TAAAATTCATGTTTCTTTGC+TGG - chr7.3:5070250-5070269 MS.gene072669:intron 25.0%
! TAAACTTTCAATTGCCATAA+AGG + chr7.3:5070961-5070980 None:intergenic 25.0%
! TCTTGGCTTAATTAATGATT+TGG - chr7.3:5069890-5069909 MS.gene072669:CDS 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr7.3:5070187-5070206 MS.gene072669:CDS 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr7.3:5070206-5070187 None:intergenic 25.0%
! TTAAGGCTTAATTAATGATG+TGG + chr7.3:5070215-5070234 None:intergenic 25.0%
!! AGCCTTAATTCTTTTTCTAA+TGG - chr7.3:5070227-5070246 MS.gene072669:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+GGG + chr7.3:5068412-5068431 None:intergenic 25.0%
!! ATTTAACTTTAACTACAGGT+TGG - chr7.3:5069366-5069385 MS.gene072669:intron 25.0%
!! TCATTCATTTTACAGGATTT+TGG - chr7.3:5067928-5067947 MS.gene072669:CDS 25.0%
!! TTGCTGTTAATCAATCATAA+TGG + chr7.3:5071577-5071596 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr7.3:5069921-5069940 MS.gene072669:CDS 25.0%
!!! TATATGTTTTGGACTAACTT+GGG - chr7.3:5071235-5071254 MS.gene072669:intron 25.0%
!!! TTATATGTTTTGGACTAACT+TGG - chr7.3:5071234-5071253 MS.gene072669:intron 25.0%
!!! TTTTTTTTTCCTTTCTGAAC+AGG - chr7.3:5069640-5069659 MS.gene072669:intron 25.0%
AAATACCAACTTCAGTACTT+TGG - chr7.3:5070925-5070944 MS.gene072669:intron 30.0%
AATACCAACTTCAGTACTTT+GGG - chr7.3:5070926-5070945 MS.gene072669:intron 30.0%
AATCTCATTTCTTTGGTCAT+TGG + chr7.3:5071837-5071856 None:intergenic 30.0%
ACACAATGACAACAATATGT+TGG + chr7.3:5069044-5069063 None:intergenic 30.0%
ATAACTTATGACATGTCCAT+AGG + chr7.3:5068606-5068625 None:intergenic 30.0%
ATATTGTTGTCATTGTGTCA+GGG - chr7.3:5069046-5069065 MS.gene072669:CDS 30.0%
ATTATACACTCAATCATTGG+TGG - chr7.3:5068200-5068219 MS.gene072669:CDS 30.0%
ATTTACTTGTATCTTCTGCT+TGG + chr7.3:5071029-5071048 None:intergenic 30.0%
CAAATGATTATATGCAGTGA+CGG + chr7.3:5069318-5069337 None:intergenic 30.0%
GAGCAAATCATAATGATAAG+AGG + chr7.3:5069801-5069820 None:intergenic 30.0%
GGCTAACATATACTAACTTA+AGG + chr7.3:5069978-5069997 None:intergenic 30.0%
GTTAAATAGACACATGTGAA+CGG - chr7.3:5070032-5070051 MS.gene072669:intron 30.0%
TACTGCATTAAAAAGCAGAA+AGG - chr7.3:5069186-5069205 MS.gene072669:intron 30.0%
TAGTGGTAAGTGTTACATAA+AGG - chr7.3:5069228-5069247 MS.gene072669:intron 30.0%
TCATTCTTGATACCTTCAAA+AGG + chr7.3:5067711-5067730 None:intergenic 30.0%
TGCTTTGATACTATTCTTAC+TGG - chr7.3:5068794-5068813 MS.gene072669:CDS 30.0%
TTGACATTGTGACAATGATT+AGG - chr7.3:5070695-5070714 MS.gene072669:CDS 30.0%
! ACTTCAACTTGCTTAATTCT+TGG - chr7.3:5069873-5069892 MS.gene072669:CDS 30.0%
! ATCAGTAAGAATGCTAGTTT+AGG - chr7.3:5070525-5070544 MS.gene072669:intron 30.0%
! GAAACATTTGTACCTTTTGA+AGG - chr7.3:5067696-5067715 MS.gene072669:CDS 30.0%
! TGTGCACCTTTGAAAAATTT+GGG + chr7.3:5071329-5071348 None:intergenic 30.0%
! TTTTTAATGCAGTAAGGAGA+AGG + chr7.3:5069180-5069199 None:intergenic 30.0%
!! TAACTTGCTTCAATCAGTAT+TGG - chr7.3:5070866-5070885 MS.gene072669:intron 30.0%
!! TTAACGTTTTGACAAAAGAC+TGG + chr7.3:5070017-5070036 None:intergenic 30.0%
!! TTATTTCTTGTCTTGGTGTT+TGG + chr7.3:5071895-5071914 None:intergenic 30.0%
!! TTTCTCCCCAAATTTTTCAA+AGG - chr7.3:5071320-5071339 MS.gene072669:CDS 30.0%
!!! AAATGAGGACATGTTTTGAT+TGG + chr7.3:5068690-5068709 None:intergenic 30.0%
!!! CATTATGATTTGCTCCTTTT+GGG - chr7.3:5069806-5069825 MS.gene072669:CDS 30.0%
!!! GCTTTTTTCATAAGCAATCA+TGG - chr7.3:5068550-5068569 MS.gene072669:intron 30.0%
!!! TCATTATGATTTGCTCCTTT+TGG - chr7.3:5069805-5069824 MS.gene072669:CDS 30.0%
!!! TTCTGCTTTTTAATGCAGTA+AGG + chr7.3:5069186-5069205 None:intergenic 30.0%
!!! TTTTAAGTTGCAGAGACAAT+CGG + chr7.3:5069286-5069305 None:intergenic 30.0%
AAACGGGACCTAACTTTATA+GGG + chr7.3:5068396-5068415 None:intergenic 35.0%
AACAACAGTCCAATTGTCAT+AGG + chr7.3:5069528-5069547 None:intergenic 35.0%
AAGAAATGAGATTGTCAGGT+AGG - chr7.3:5071844-5071863 MS.gene072669:CDS 35.0%
AAGCAATCATGGATAACTTG+TGG - chr7.3:5068561-5068580 MS.gene072669:intron 35.0%
AATGTGTACATGATCACAGT+AGG + chr7.3:5068257-5068276 None:intergenic 35.0%
ACAATGTTACAGTGGACAAA+CGG + chr7.3:5069571-5069590 None:intergenic 35.0%
ACAGCACTAGAACATAAATG+AGG + chr7.3:5068705-5068724 None:intergenic 35.0%
ACCAAAGAAATGAGATTGTC+AGG - chr7.3:5071840-5071859 MS.gene072669:CDS 35.0%
ACCTGACAATCTCATTTCTT+TGG + chr7.3:5071844-5071863 None:intergenic 35.0%
AGAAATGAGATTGTCAGGTA+GGG - chr7.3:5071845-5071864 MS.gene072669:CDS 35.0%
ATACCAACTTCAGTACTTTG+GGG - chr7.3:5070927-5070946 MS.gene072669:intron 35.0%
ATGGCAATTGAAAGTTTACC+TGG - chr7.3:5070963-5070982 MS.gene072669:intron 35.0%
ATTCAAGCAGCTACAAGTAT+GGG - chr7.3:5070750-5070769 MS.gene072669:CDS 35.0%
CATATTGTTGTCATTGTGTC+AGG - chr7.3:5069045-5069064 MS.gene072669:CDS 35.0%
CGTCACTGCATATAATCATT+TGG - chr7.3:5069316-5069335 MS.gene072669:intron 35.0%
CTGTTTCAACAAAAGTAGCA+TGG + chr7.3:5071163-5071182 None:intergenic 35.0%
GAACAACTAGAGAGAAATAC+TGG - chr7.3:5068004-5068023 MS.gene072669:intron 35.0%
GATTAACAGCAATCTGAGTT+TGG - chr7.3:5071585-5071604 MS.gene072669:intron 35.0%
GGCATTATACACTCAATCAT+TGG - chr7.3:5068197-5068216 MS.gene072669:CDS 35.0%
GGTATCAAGAATGATCTAAG+AGG - chr7.3:5067717-5067736 MS.gene072669:CDS 35.0%
GTAGATTTGATACTTGCAGA+TGG - chr7.3:5068131-5068150 MS.gene072669:intron 35.0%
GTCATACCAAAAATCCCAAA+AGG + chr7.3:5069823-5069842 None:intergenic 35.0%
GTTCCTGTTGTGTTCATAAT+TGG - chr7.3:5069674-5069693 MS.gene072669:intron 35.0%
TAATGTGCTACAAGCAAGAT+TGG - chr7.3:5067745-5067764 MS.gene072669:CDS 35.0%
TACGAAATCTTACTGATGCA+AGG + chr7.3:5071406-5071425 None:intergenic 35.0%
TAGTATGCCTAAATTCACCA+CGG + chr7.3:5071668-5071687 None:intergenic 35.0%
TATGTATCCACCTTAGACAT+TGG - chr7.3:5070073-5070092 MS.gene072669:CDS 35.0%
TCAAATATAGTCTCATCGAC+CGG + chr7.3:5070789-5070808 None:intergenic 35.0%
TCAAGAATGATCTAAGAGGA+AGG - chr7.3:5067721-5067740 MS.gene072669:CDS 35.0%
TCTAGCAACTCTTAAACATC+AGG - chr7.3:5070350-5070369 MS.gene072669:intron 35.0%
TGACAATTGGACTGTTGTTA+AGG - chr7.3:5069529-5069548 MS.gene072669:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr7.3:5069910-5069929 MS.gene072669:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr7.3:5069929-5069910 None:intergenic 35.0%
TGTTCACCAAATGAAATGAC+AGG + chr7.3:5067989-5068008 None:intergenic 35.0%
TTGACGGAAGATGACTTAAA+GGG - chr7.3:5070128-5070147 MS.gene072669:CDS 35.0%
TTGGCATCAACTTCAATATG+TGG - chr7.3:5068176-5068195 MS.gene072669:intron 35.0%
TTTCCTTTCTGAACAGGATA+TGG - chr7.3:5069646-5069665 MS.gene072669:intron 35.0%
! AGCAATCATGGATAACTTGT+GGG - chr7.3:5068562-5068581 MS.gene072669:CDS 35.0%
! CAATTGAGTTTTTACCTTCG+TGG - chr7.3:5069113-5069132 MS.gene072669:intron 35.0%
! GATTTTGTAGGGTATGTGTA+TGG - chr7.3:5068769-5068788 MS.gene072669:CDS 35.0%
! GCAATACCTGTCATTTCATT+TGG - chr7.3:5067980-5067999 MS.gene072669:CDS 35.0%
! GCTAGTTTAGGACAGTTATA+TGG - chr7.3:5070537-5070556 MS.gene072669:intron 35.0%
! GTGCACCTTTGAAAAATTTG+GGG + chr7.3:5071328-5071347 None:intergenic 35.0%
! GTGTGCACCTTTGAAAAATT+TGG + chr7.3:5071330-5071349 None:intergenic 35.0%
! GTTGGTATTTTCTTGAGAAC+AGG + chr7.3:5070915-5070934 None:intergenic 35.0%
! TAGAAACCTGTTTCTTGGAT+GGG - chr7.3:5068313-5068332 MS.gene072669:CDS 35.0%
! TATTTTCTTGAGAACAGGCA+TGG + chr7.3:5070910-5070929 None:intergenic 35.0%
! TTAGGATCATTTCTTGGTGT+TGG + chr7.3:5071720-5071739 None:intergenic 35.0%
! TTTACCTGGAAACCAGTTTT+GGG - chr7.3:5070977-5070996 MS.gene072669:intron 35.0%
!! ACATATTGAAGTTGATGCCA+AGG + chr7.3:5068177-5068196 None:intergenic 35.0%
!! ACATTATTGTGTGGCCTTAT+TGG - chr7.3:5070276-5070295 MS.gene072669:intron 35.0%
!! ACCTCTCTTTTAATTCTCGT+GGG - chr7.3:5071757-5071776 MS.gene072669:intron 35.0%
!! TTGCTTCAATCAGTATTGGT+TGG - chr7.3:5070870-5070889 MS.gene072669:intron 35.0%
!!! ACCTTTACTGATTTTAGGAG+TGG - chr7.3:5068226-5068245 MS.gene072669:CDS 35.0%
!!! GGTCAACCTTTACTGATTTT+AGG - chr7.3:5068221-5068240 MS.gene072669:CDS 35.0%
!!! TTTGCTCCTTTTGGGATTTT+TGG - chr7.3:5069814-5069833 MS.gene072669:CDS 35.0%
AAAGCAGAAAGGCTAGATCA+TGG - chr7.3:5069197-5069216 MS.gene072669:intron 40.0%
AAAGGATCCTTTCCCAAAAC+TGG + chr7.3:5070992-5071011 None:intergenic 40.0%
AAATATAGTCTCATCGACCG+GGG + chr7.3:5070787-5070806 None:intergenic 40.0%
AACCGTTAAGCCAATGTCTA+AGG + chr7.3:5070086-5070105 None:intergenic 40.0%
AACGGGACCTAACTTTATAG+GGG + chr7.3:5068395-5068414 None:intergenic 40.0%
AAGCACTTGTGTGACAATTC+AGG + chr7.3:5068642-5068661 None:intergenic 40.0%
ATGAGTTTCGCATACCAAAG+AGG - chr7.3:5069077-5069096 MS.gene072669:CDS 40.0%
ATTGGAATTCCTCCTGCAAA+TGG - chr7.3:5070294-5070313 MS.gene072669:intron 40.0%
CAAACGGGACCTAACTTTAT+AGG + chr7.3:5068397-5068416 None:intergenic 40.0%
CAAATATAGTCTCATCGACC+GGG + chr7.3:5070788-5070807 None:intergenic 40.0%
CATACTTGTAGCTGCTTGAA+TGG + chr7.3:5070751-5070770 None:intergenic 40.0%
CATTCAAGCAGCTACAAGTA+TGG - chr7.3:5070749-5070768 MS.gene072669:CDS 40.0%
CGAGAATTAAAAGAGAGGTG+CGG + chr7.3:5071756-5071775 None:intergenic 40.0%
CTATAAAGTTAGGTCCCGTT+TGG - chr7.3:5068395-5068414 MS.gene072669:CDS 40.0%
CTATTCTTACTGGCCATCTT+AGG - chr7.3:5068804-5068823 MS.gene072669:CDS 40.0%
CTTACTGATACTGTTTCGAG+CGG + chr7.3:5070514-5070533 None:intergenic 40.0%
CTTACTGATGCAAGGTTGAA+CGG + chr7.3:5071398-5071417 None:intergenic 40.0%
GAAATGAGATTGTCAGGTAG+GGG - chr7.3:5071846-5071865 MS.gene072669:CDS 40.0%
GAACCATATCCTGTTCAGAA+AGG + chr7.3:5069652-5069671 None:intergenic 40.0%
GCCACTCCTAAAATCAGTAA+AGG + chr7.3:5068230-5068249 None:intergenic 40.0%
GCTAAAGAAAGACCTGAGTT+GGG - chr7.3:5068290-5068309 MS.gene072669:CDS 40.0%
GCTAGACTCTTTGTATGCAT+CGG + chr7.3:5070336-5070355 None:intergenic 40.0%
GCTCCAATTATGAACACAAC+AGG + chr7.3:5069680-5069699 None:intergenic 40.0%
GTGGGGATTTATTTGGTTGA+CGG - chr7.3:5070112-5070131 MS.gene072669:CDS 40.0%
GTTGACGGAAGATGACTTAA+AGG - chr7.3:5070127-5070146 MS.gene072669:CDS 40.0%
TAAGGAGAAGGCCAAATGAA+AGG + chr7.3:5069168-5069187 None:intergenic 40.0%
TCTAACAGCTGTTCAAACCT+TGG - chr7.3:5068157-5068176 MS.gene072669:intron 40.0%
TGAGTTTCGCATACCAAAGA+GGG - chr7.3:5069078-5069097 MS.gene072669:CDS 40.0%
TGCTAAAGAAAGACCTGAGT+TGG - chr7.3:5068289-5068308 MS.gene072669:CDS 40.0%
TGCTGGAAGACATTATTGTG+TGG - chr7.3:5070267-5070286 MS.gene072669:intron 40.0%
TGTGACAATGATTAGGCACA+AGG - chr7.3:5070702-5070721 MS.gene072669:CDS 40.0%
TTCGCTTTGGTCCTTTCATT+TGG - chr7.3:5069154-5069173 MS.gene072669:intron 40.0%
TTCTTTGGTCATTGGACTGT+TGG + chr7.3:5071829-5071848 None:intergenic 40.0%
TTGCAGGAGGAATTCCAATA+AGG + chr7.3:5070293-5070312 None:intergenic 40.0%
TTGGTGCAGTGAAGAGTAAA+AGG + chr7.3:5071010-5071029 None:intergenic 40.0%
TTTGACGGTGGGGATTTATT+TGG - chr7.3:5070105-5070124 MS.gene072669:CDS 40.0%
! ACCAAGAGCATGATCATCAA+AGG + chr7.3:5071284-5071303 None:intergenic 40.0%
! ACTGGTGGTGAGGATTTATT+TGG + chr7.3:5069999-5070018 None:intergenic 40.0%
! GAGAATTAAAAGAGAGGTGC+GGG + chr7.3:5071755-5071774 None:intergenic 40.0%
! GTAGAAACCTGTTTCTTGGA+TGG - chr7.3:5068312-5068331 MS.gene072669:CDS 40.0%
! GTTTACCTGGAAACCAGTTT+TGG - chr7.3:5070976-5070995 MS.gene072669:intron 40.0%
! TCCTTTGATGATCATGCTCT+TGG - chr7.3:5071280-5071299 MS.gene072669:CDS 40.0%
! TTGAGTTTTTACCTTCGTGG+AGG - chr7.3:5069116-5069135 MS.gene072669:intron 40.0%
! TTGGGTAGAAACCTGTTTCT+TGG - chr7.3:5068308-5068327 MS.gene072669:CDS 40.0%
!! ACGTTTTGACAAAAGACTGG+TGG + chr7.3:5070014-5070033 None:intergenic 40.0%
!! ATCATTTCTTGGTGTTGGAG+TGG + chr7.3:5071715-5071734 None:intergenic 40.0%
!! CACCTCTCTTTTAATTCTCG+TGG - chr7.3:5071756-5071775 MS.gene072669:intron 40.0%
!! CACCTTAGACATTGGCTTAA+CGG - chr7.3:5070081-5070100 MS.gene072669:CDS 40.0%
!! CCTCTCTTTTAATTCTCGTG+GGG - chr7.3:5071758-5071777 MS.gene072669:intron 40.0%
!! CTCTCTTTTAATTCTCGTGG+GGG - chr7.3:5071759-5071778 MS.gene072669:intron 40.0%
!! CTTCAATCAGTATTGGTTGG+AGG - chr7.3:5070873-5070892 MS.gene072669:intron 40.0%
!! CTTTAACTACAGGTTGGCTT+CGG - chr7.3:5069372-5069391 MS.gene072669:intron 40.0%
!! GGGAGAAAGTATTGTCTTAG+TGG + chr7.3:5071308-5071327 None:intergenic 40.0%
!! TAAGAGGTGTCTGCATTTGA+TGG + chr7.3:5070581-5070600 None:intergenic 40.0%
!! TGTCTTGGTGTTTGGAATCA+GGG + chr7.3:5071887-5071906 None:intergenic 40.0%
!! TTGTCTTGGTGTTTGGAATC+AGG + chr7.3:5071888-5071907 None:intergenic 40.0%
!!! CATTGGCTTAACGGTTTTGA+CGG - chr7.3:5070090-5070109 MS.gene072669:CDS 40.0%
!!! CGGCTTTTAGGATCATTTCT+TGG + chr7.3:5071726-5071745 None:intergenic 40.0%
AAACAACTCTCCCGCAATTC+GGG + chr7.3:5068856-5068875 None:intergenic 45.0%
AAAGCTGAGATGCTACACTG+TGG + chr7.3:5069745-5069764 None:intergenic 45.0%
AACAGGTTTCTACCCAACTC+AGG + chr7.3:5068305-5068324 None:intergenic 45.0%
AAGGCTAGATCATGGCGTTA+TGG - chr7.3:5069205-5069224 MS.gene072669:intron 45.0%
ACCACGGATTTGGACTAAAG+AGG + chr7.3:5069496-5069515 None:intergenic 45.0%
AGATCATGGCGTTATGGTAG+TGG - chr7.3:5069211-5069230 MS.gene072669:intron 45.0%
AGCACTGCAATCATAGTTGC+TGG + chr7.3:5069710-5069729 None:intergenic 45.0%
AGCTACAAGTATGGGAAACG+TGG - chr7.3:5070758-5070777 MS.gene072669:CDS 45.0%
CAAACAACTCTCCCGCAATT+CGG + chr7.3:5068857-5068876 None:intergenic 45.0%
CAAGAAGCCGTGGTGAATTT+AGG - chr7.3:5071658-5071677 MS.gene072669:intron 45.0%
CATAAGTGGCACACCATAGT+CGG + chr7.3:5069408-5069427 None:intergenic 45.0%
CCCCACGAGAATTAAAAGAG+AGG + chr7.3:5071761-5071780 None:intergenic 45.0%
CGTTAAGCCAATGTCTAAGG+TGG + chr7.3:5070083-5070102 None:intergenic 45.0%
CGTTGTTCCTTAACCTCAAC+AGG + chr7.3:5070840-5070859 None:intergenic 45.0%
CTAACTTGGGTACCTATTGC+TGG - chr7.3:5071248-5071267 MS.gene072669:intron 45.0%
CTTATGGTCCTAGTTTGGAC+AGG - chr7.3:5069422-5069441 MS.gene072669:intron 45.0%
CTTGCTTCCTGTTGAGGTTA+AGG - chr7.3:5070830-5070849 MS.gene072669:intron 45.0%
GAAGGGTCCTGGTAAATAAG+AGG + chr7.3:5070597-5070616 None:intergenic 45.0%
GAAGTTATCACAAGAAGCCG+TGG - chr7.3:5071648-5071667 MS.gene072669:intron 45.0%
GATGGAACATGCTCCTAAGA+TGG + chr7.3:5068820-5068839 None:intergenic 45.0%
GCTTTCGTATCTTCCCTCTT+TGG + chr7.3:5069094-5069113 None:intergenic 45.0%
GGAAACATGACTCCAGCAAT+AGG + chr7.3:5071263-5071282 None:intergenic 45.0%
GGAGTGGAGCTATTGATCTT+TGG + chr7.3:5071699-5071718 None:intergenic 45.0%
GGTGCTTCTCATATTGGAGA+AGG - chr7.3:5071612-5071631 MS.gene072669:intron 45.0%
GTCCAAACTAGGACCATAAG+TGG + chr7.3:5069422-5069441 None:intergenic 45.0%
GTGGAATCAAAGCAGGTGTA+AGG - chr7.3:5067772-5067791 MS.gene072669:CDS 45.0%
TACAAGCAAGATTGGACAGG+TGG - chr7.3:5067753-5067772 MS.gene072669:CDS 45.0%
TGCAAGGTTGAACGGTAAAG+CGG + chr7.3:5071390-5071409 None:intergenic 45.0%
TGCTAATGGGATGTTCGCTT+TGG - chr7.3:5069141-5069160 MS.gene072669:intron 45.0%
TGCTACAAGCAAGATTGGAC+AGG - chr7.3:5067750-5067769 MS.gene072669:CDS 45.0%
TGTCCAGCCCCTATAAAGTT+AGG - chr7.3:5068385-5068404 MS.gene072669:CDS 45.0%
TGTGGTATGACTCCATTTGC+AGG + chr7.3:5070309-5070328 None:intergenic 45.0%
TTTGTATGCATCGGAGACTG+TGG + chr7.3:5070327-5070346 None:intergenic 45.0%
! ATCGACTTACTCGAGCAGAA+GGG + chr7.3:5070614-5070633 None:intergenic 45.0%
! CTTTCCCAAAACTGGTTTCC+AGG + chr7.3:5070984-5071003 None:intergenic 45.0%
! GCAGACACCTCTTATTTACC+AGG - chr7.3:5070587-5070606 MS.gene072669:intron 45.0%
! TGCCACTTATGGTCCTAGTT+TGG - chr7.3:5069417-5069436 MS.gene072669:intron 45.0%
! TGTTTGGAATCAGGGTTGAG+AGG + chr7.3:5071879-5071898 None:intergenic 45.0%
! TTGACAAAAGACTGGTGGTG+AGG + chr7.3:5070009-5070028 None:intergenic 45.0%
! TTGGGGCTACTTTGCCTTTA+TGG - chr7.3:5070944-5070963 MS.gene072669:intron 45.0%
!! CTTCGTGGAGGTTTGCTAAT+GGG - chr7.3:5069128-5069147 MS.gene072669:intron 45.0%
!! TAGCCCCAAAGTACTGAAGT+TGG + chr7.3:5070933-5070952 None:intergenic 45.0%
!!! CTGGAAACCAGTTTTGGGAA+AGG - chr7.3:5070982-5071001 MS.gene072669:intron 45.0%
AACCGCTTTACCCGAATTGC+GGG - chr7.3:5068843-5068862 MS.gene072669:CDS 50.0%
AGGACACACCTGTCCAAACT+AGG + chr7.3:5069433-5069452 None:intergenic 50.0%
AGGTGCACACCTTCAAGACT+TGG - chr7.3:5071340-5071359 MS.gene072669:CDS 50.0%
AGTCCAATTGTCATAGGCGC+CGG + chr7.3:5069522-5069541 None:intergenic 50.0%
ATCCAGCCCATCCAAGAAAC+AGG + chr7.3:5068322-5068341 None:intergenic 50.0%
CAACCGCTTTACCCGAATTG+CGG - chr7.3:5068842-5068861 MS.gene072669:CDS 50.0%
CAGCTGCATCCAAGTCTTGA+AGG + chr7.3:5071352-5071371 None:intergenic 50.0%
CCATTAGCAAACCTCCACGA+AGG + chr7.3:5069130-5069149 None:intergenic 50.0%
CCGACTGCAAGTGTTCCAAA+CGG - chr7.3:5069458-5069477 MS.gene072669:intron 50.0%
CGAATTGCGGGAGAGTTGTT+TGG - chr7.3:5068855-5068874 MS.gene072669:CDS 50.0%
CTAGTGCTGTCACTGTCATG+TGG - chr7.3:5068715-5068734 MS.gene072669:CDS 50.0%
CTTGGATGCAGCTGAGTATG+AGG - chr7.3:5071358-5071377 MS.gene072669:CDS 50.0%
GCACACCATAGTCGGCTATA+AGG + chr7.3:5069400-5069419 None:intergenic 50.0%
GCCTCTTTAGTCCAAATCCG+TGG - chr7.3:5069492-5069511 MS.gene072669:intron 50.0%
GGACCTAACTTTATAGGGGC+TGG + chr7.3:5068391-5068410 None:intergenic 50.0%
GGAGCTGGTGCTTCTCATAT+TGG - chr7.3:5071606-5071625 MS.gene072669:intron 50.0%
GGTATGACTCCATTTGCAGG+AGG + chr7.3:5070306-5070325 None:intergenic 50.0%
GTGTTCCAAACGGTATCCCA+AGG - chr7.3:5069468-5069487 MS.gene072669:intron 50.0%
TGGACAGGTGGAATCAAAGC+AGG - chr7.3:5067765-5067784 MS.gene072669:CDS 50.0%
! AACCTGTTTCTTGGATGGGC+TGG - chr7.3:5068317-5068336 MS.gene072669:CDS 50.0%
! AGACGACTTGCTTCCTGTTG+AGG - chr7.3:5070824-5070843 MS.gene072669:intron 50.0%
! CAGCAATCTGAGTTTGGAGC+TGG - chr7.3:5071591-5071610 MS.gene072669:intron 50.0%
! CCGTTTGGAACACTTGCAGT+CGG + chr7.3:5069461-5069480 None:intergenic 50.0%
! GATCGACTTACTCGAGCAGA+AGG + chr7.3:5070615-5070634 None:intergenic 50.0%
!! CCTTCGTGGAGGTTTGCTAA+TGG - chr7.3:5069127-5069146 MS.gene072669:intron 50.0%
!! CGACTATGGTGTGCCACTTA+TGG - chr7.3:5069406-5069425 MS.gene072669:intron 50.0%
!! GCTTAACGGTTTTGACGGTG+GGG - chr7.3:5070095-5070114 MS.gene072669:CDS 50.0%
!! GGCTTAACGGTTTTGACGGT+GGG - chr7.3:5070094-5070113 MS.gene072669:CDS 50.0%
!! TCGGGTAAAGCGGTTGATGA+TGG + chr7.3:5068838-5068857 None:intergenic 50.0%
!! TGGCTTAACGGTTTTGACGG+TGG - chr7.3:5070093-5070112 MS.gene072669:CDS 50.0%
!! TGTTTCTTGGATGGGCTGGA+TGG - chr7.3:5068321-5068340 MS.gene072669:CDS 50.0%
!! TTGGACTAAAGAGGCGCCTT+GGG + chr7.3:5069487-5069506 None:intergenic 50.0%
!! TTTGGACTAAAGAGGCGCCT+TGG + chr7.3:5069488-5069507 None:intergenic 50.0%
AACACTTGCAGTCGGCGTGT+AGG + chr7.3:5069453-5069472 None:intergenic 55.0%
ACTGAGCAAAGTCCTCGGTC+TGG - chr7.3:5071792-5071811 MS.gene072669:intron 55.0%
CTCCCGCAATTCGGGTAAAG+CGG + chr7.3:5068848-5068867 None:intergenic 55.0%
GTCATTGTGTCAGGGACTCG+TGG - chr7.3:5069054-5069073 MS.gene072669:CDS 55.0%
GTCCAATTGTCATAGGCGCC+GGG + chr7.3:5069521-5069540 None:intergenic 55.0%
TATGGGAAACGTGGATGCCC+CGG - chr7.3:5070767-5070786 MS.gene072669:CDS 55.0%
TCGCGACTGAGCAAAGTCCT+CGG - chr7.3:5071787-5071806 MS.gene072669:intron 55.0%
TTACTCGAGCAGAAGGGTCC+TGG + chr7.3:5070608-5070627 None:intergenic 55.0%
! CGGAGCCTTATAGCCGACTA+TGG - chr7.3:5069392-5069411 MS.gene072669:intron 55.0%
AGGCGCCTTGGGATACCGTT+TGG + chr7.3:5069476-5069495 None:intergenic 60.0%
AGTCCAAATCCGTGGTCGCC+CGG - chr7.3:5069500-5069519 MS.gene072669:intron 60.0%
AGTCCTCGGTCTGGCGTAAG+AGG - chr7.3:5071801-5071820 MS.gene072669:intron 60.0%
! AAGAGAGGTGCGGGCTCAGA+CGG + chr7.3:5071746-5071765 None:intergenic 60.0%
! TGCGGGCTCAGACGGCTTTT+AGG + chr7.3:5071738-5071757 None:intergenic 60.0%
CGCCCGGCGCCTATGACAAT+TGG - chr7.3:5069516-5069535 MS.gene072669:intron 65.0%
GTGCCTCTTACGCCAGACCG+AGG + chr7.3:5071807-5071826 None:intergenic 65.0%
!! TCATAGGCGCCGGGCGACCA+CGG + chr7.3:5069512-5069531 None:intergenic 70.0%
GCGCCGGGCGACCACGGATT+TGG + chr7.3:5069506-5069525 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 5067690 5071914 5067690 ID=MS.gene072669
chr7.3 mRNA 5067690 5071914 5067690 ID=MS.gene072669.t1;Parent=MS.gene072669
chr7.3 exon 5071818 5071914 5071818 ID=MS.gene072669.t1.exon1;Parent=MS.gene072669.t1
chr7.3 CDS 5071818 5071914 5071818 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5071262 5071454 5071262 ID=MS.gene072669.t1.exon2;Parent=MS.gene072669.t1
chr7.3 CDS 5071262 5071454 5071262 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5070687 5070825 5070687 ID=MS.gene072669.t1.exon3;Parent=MS.gene072669.t1
chr7.3 CDS 5070687 5070825 5070687 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5070372 5070537 5070372 ID=MS.gene072669.t1.exon4;Parent=MS.gene072669.t1
chr7.3 CDS 5070372 5070537 5070372 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5070054 5070220 5070054 ID=MS.gene072669.t1.exon5;Parent=MS.gene072669.t1
chr7.3 CDS 5070054 5070220 5070054 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5069769 5069942 5069769 ID=MS.gene072669.t1.exon6;Parent=MS.gene072669.t1
chr7.3 CDS 5069769 5069942 5069769 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5069233 5069328 5069233 ID=MS.gene072669.t1.exon7;Parent=MS.gene072669.t1
chr7.3 CDS 5069233 5069328 5069233 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5068981 5069118 5068981 ID=MS.gene072669.t1.exon8;Parent=MS.gene072669.t1
chr7.3 CDS 5068981 5069118 5068981 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5068562 5068887 5068562 ID=MS.gene072669.t1.exon9;Parent=MS.gene072669.t1
chr7.3 CDS 5068562 5068887 5068562 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5068192 5068459 5068192 ID=MS.gene072669.t1.exon10;Parent=MS.gene072669.t1
chr7.3 CDS 5068192 5068459 5068192 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
chr7.3 exon 5067690 5068001 5067690 ID=MS.gene072669.t1.exon11;Parent=MS.gene072669.t1
chr7.3 CDS 5067690 5068001 5067690 ID=cds.MS.gene072669.t1;Parent=MS.gene072669.t1
Gene Sequence

>MS.gene072669

ATGGAAGAAACATTTGTACCTTTTGAAGGTATCAAGAATGATCTAAGAGGAAGGTTAATGTGCTACAAGCAAGATTGGACAGGTGGAATCAAAGCAGGTGTAAGGTATATTCTTATAAATTATATATACTATATAGCTTCTTTTTTTTACAGAATATACTATATAGTTTTTAGTAGTAATTAAGATATAGATTATAAAGTTTTTTTGACCAATTGAAATATAACTTTCATAAATGTTTTCATTCATTTTACAGGATTTTGGCCCCCACAACATACATATTTTTTGCTTCTGCAATACCTGTCATTTCATTTGGTGAACAACTAGAGAGAAATACTGGTACTGAAATGAATATTCATAATTTAACTATAAGTATATTTTGGAATATTTTTTCATAAAGGAAAAGGAAATAACTTTAGAAAAAATGAGTTAGCATTAAAATGTGTAGATTTGATACTTGCAGATGGTGTTCTAACAGCTGTTCAAACCTTGGCATCAACTTCAATATGTGGCATTATACACTCAATCATTGGTGGTCAACCTTTACTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAAAGACCTGAGTTGGGTAGAAACCTGTTTCTTGGATGGGCTGGATGGTAAATAACTCATTCTTTTTATTTTTGTTTTGCTTCTCAATATGTCCAGCCCCTATAAAGTTAGGTCCCGTTTGGATAAACAACTTAATTAGGTTTTGTTGTTTGTTAGCACAAACGCTTATCTCACAAGTGCTTATGTATATGCTATTTTATAACAAAGATTAAAAAAAAAAAAAAAAATCAAAACTGTTTTCATAAAATTTATAAGCTTTTTTCATAAGCAATCATGGATAACTTGTGGGAATAAGTTGAAAAAAAAACCTATGGACATGTCATAAGTTATTTCTATAAGTTCTCCTGAATTGTCACACAAGTGCTTATATCAGTAGATAAACTCAAACAAGCCAATCAAAACATGTCCTCATTTATGTTCTAGTGCTGTCACTGTCATGTGGCTTACCATTGTCTTGTTTTCATTATTTTCTTGATTTTGTAGGGTATGTGTATGGACTGCTTTGATACTATTCTTACTGGCCATCTTAGGAGCATGTTCCATCATCAACCGCTTTACCCGAATTGCGGGAGAGTTGTTTGGCATGCTCATTGCAATGCTTTTCATGCAGCAAGCTATCAAAGTAAGACAATTATCAAAGTTTACATTGGTCATTTATCATATATTTATTCTATCTAACTATTTATCTATCTATCAACAAAGGTGTTAGTTAATGCATGTTCACATGATATACCGAAGTTATTTACCAACATATTGTTGTCATTGTGTCAGGGACTCGTGGATGAGTTTCGCATACCAAAGAGGGAAGATACGAAAGCAATTGAGTTTTTACCTTCGTGGAGGTTTGCTAATGGGATGTTCGCTTTGGTCCTTTCATTTGGCCTTCTCCTTACTGCATTAAAAAGCAGAAAGGCTAGATCATGGCGTTATGGTAGTGGTAAGTGTTACATAAAGGCTCTTCAGTCTCACTCTTTATACATACATATGCCGATTGTCTCTGCAACTTAAAAATTCTGAATCCGTCACTGCATATAATCATTTGGTTTTCTAAGATAATATGATAATAATTTATTTAACTTTAACTACAGGTTGGCTTCGGAGCCTTATAGCCGACTATGGTGTGCCACTTATGGTCCTAGTTTGGACAGGTGTGTCCTACACGCCGACTGCAAGTGTTCCAAACGGTATCCCAAGGCGCCTCTTTAGTCCAAATCCGTGGTCGCCCGGCGCCTATGACAATTGGACTGTTGTTAAGGCATGTAAACAAGTTCTCCGTTTGTCCACTGTAACATTGTTTATTAAAAAGATGGCTTATTAACAAAAAAAATTAATAATTGTGCTATTTTTTTTTTTCCTTTCTGAACAGGATATGGTTCAAGTTCCTGTTGTGTTCATAATTGGAGCATTTATACCAGCAACTATGATTGCAGTGCTTTATTACTTTGACCACAGTGTAGCATCTCAGCTTTCTCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCCTCTTATCATTATGATTTGCTCCTTTTGGGATTTTTGGTATGACACTTCATTATGTCAATTCCTAGTTCATTAAACTTCAACTTGCTTAATTCTTGGCTTAATTAATGATTTGGTCCCTTAAGTTATTTGTTGGTTACATTTTGGTCCCATAAGTTATTAACGTTACAATTTGGTCCCTTAAGTTAGTATATGTTAGCCAAATAAATCCTCACCACCAGTCTTTTGTCAAAACGTTAAATAGACACATGTGAACGGTGACGTGACAACTTGCAATATGTATCCACCTTAGACATTGGCTTAACGGTTTTGACGGTGGGGATTTATTTGGTTGACGGAAGATGACTTAAAGGGACCAAATTGTAACGTTAATAACTTATGGGACTAAAATGTAACCAACAAATAACTTAAGGGACCACATCATTAATTAAGCCTTAATTCTTTTTCTAATGGTAAAATTCATGTTTCTTTGCTGGAAGACATTATTGTGTGGCCTTATTGGAATTCCTCCTGCAAATGGAGTCATACCACAGTCTCCGATGCATACAAAGAGTCTAGCAACTCTTAAACATCAGGTAAGACAAGTTAAAAATATTGTATCATGTAGAAAATTTGTTCCTGATTAATTTTTAACTCTTAGTAATGTGAATATGTGTCTAACTAAAAAATGAACAATGATGTTGTTACAGTTGCTTCGAAACAGACTAGTGAAAACCGCTCGAAACAGTATCAGTAAGAATGCTAGTTTAGGACAGTTATATGGTAATATGCAAGAAGTATACCATCAAATGCAGACACCTCTTATTTACCAGGACCCTTCTGCTCGAGTAAGTCGATCCTAAACCTTCTTAAAATTTATTTTCTTATTAATAAATCTCTTTTTAATATATGACATATGTTGACATTGTGACAATGATTAGGCACAAGGACTAAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACAAGTATGGGAAACGTGGATGCCCCGGTCGATGAGACTATATTTGACGTCGAGAAAGAAATAGACGACTTGCTTCCTGTTGAGGTTAAGGAACAACGTGTCAGTAACTTGCTTCAATCAGTATTGGTTGGAGGATGTGTTGCAGCCATGCCTGTTCTCAAGAAAATACCAACTTCAGTACTTTGGGGCTACTTTGCCTTTATGGCAATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCCTTTTACTCTTCACTGCACCAAGCAGAAGATACAAGTAAATAAAAATTCTGTCTTTGATCCAATTTAATATATATACGTTTAATCTTATATTCTATATATACTTGTAATAATGAACAAATTTTCTTTTAATGTGTAGGGTGCTTGAAGATTACCATGCTACTTTTGTTGAAACAGTTCCTTTTAAGACAATAGCAATATTCACAATTTTCCAAACCATTTATCTATTTATATGTTTTGGACTAACTTGGGTACCTATTGCTGGAGTCATGTTTCCTTTGATGATCATGCTCTTGGTTCCACTAAGACAATACTTTCTCCCCAAATTTTTCAAAGGTGCACACCTTCAAGACTTGGATGCAGCTGAGTATGAGGAGCAAACCGCTTTACCGTTCAACCTTGCATCAGTAAGATTTCGTATCCAACAAGCTTAATAATCATAACAATAGAGTTTAATTTTGATATATTGTCAGTGGAAAATGTTTTACACTGTCAACAAATCACAACTGCTGATATGTGTGATCTTAAAAGTAGGTATGATTAGAGTCGAACATTTTTAATGATCTGACCATTATGATTGATTAACAGCAATCTGAGTTTGGAGCTGGTGCTTCTCATATTGGAGAAGGTGAGATATTTGATGAAGTTATCACAAGAAGCCGTGGTGAATTTAGGCATACTACTAACAGTCCAAAGATCAATAGCTCCACTCCAACACCAAGAAATGATCCTAAAAGCCGTCTGAGCCCGCACCTCTCTTTTAATTCTCGTGGGGGCGAGTTCGCGACTGAGCAAAGTCCTCGGTCTGGCGTAAGAGGCACCAACAGTCCAATGACCAAAGAAATGAGATTGTCAGGTAGGGGAATAAGTCCTCTCAACCCTGATTCCAAACACCAAGACAAGAAATAA

Protein sequence

>MS.gene072669.t1

MEETFVPFEGIKNDLRGRLMCYKQDWTGGIKADGVLTAVQTLASTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLGWAGWVCVWTALILFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDTKAIEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYTPTASVPNGIPRRLFSPNPWSPGAYDNWTVVKDMVQVPVVFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVKTARNSISKNASLGQLYGNMQEVYHQMQTPLIYQDPSARAQGLKELKETTIQAATSMGNVDAPVDETIFDVEKEIDDLLPVEVKEQRVSNLLQSVLVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIAIFTIFQTIYLFICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGAHLQDLDAAEYEEQTALPFNLASFGAGASHIGEGEIFDEVITRSRGEFRHTTNSPKINSSTPTPRNDPKSRLSPHLSFNSRGGEFATEQSPRSGVRGTNSPMTKEMRLSGRGISPLNPDSKHQDKK