Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75990.t1 | XP_003621609.1 | 86.3 | 627 | 85 | 1 | 1 | 627 | 1 | 626 | 3.00E-216 | 761.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75990.t1 | Q8L7E5 | 30.3 | 661 | 407 | 9 | 10 | 616 | 37 | 697 | 6.0e-56 | 220.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75990.t1 | G7KS23 | 86.3 | 627 | 85 | 1 | 1 | 627 | 1 | 626 | 2.2e-216 | 761.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene75990 | 0.871066 | 9.07E-67 | -1.69E-46 |
| MS.gene049159 | MS.gene75990 | 0.848686 | 5.23E-60 | -1.69E-46 |
| MS.gene04918 | MS.gene75990 | 0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene75990 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene75990 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene75990 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene75990 | 0.801368 | 9.30E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene75990 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene75990 | 0.803781 | 2.96E-49 | -1.69E-46 |
| MS.gene049808 | MS.gene75990 | 0.819224 | 1.30E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene75990 | 0.836794 | 7.59E-57 | -1.69E-46 |
| MS.gene049850 | MS.gene75990 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene75990 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene75990 | 0.803844 | 2.87E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene75990 | 0.815343 | 9.70E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene75990 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene75990 | 0.814907 | 1.21E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene75990 | 0.83614 | 1.11E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene75990 | 0.852269 | 5.16E-61 | -1.69E-46 |
| MS.gene050808 | MS.gene75990 | 0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene75990 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene75990 | 0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene75990 | 0.815441 | 9.23E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene75990 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene051180 | MS.gene75990 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene75990 | 0.842135 | 3.11E-58 | -1.69E-46 |
| MS.gene051234 | MS.gene75990 | 0.803146 | 4.01E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene75990 | 0.817497 | 3.20E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene75990 | 0.84721 | 1.34E-59 | -1.69E-46 |
| MS.gene051328 | MS.gene75990 | 0.822215 | 2.67E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene75990 | 0.802878 | 4.55E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene75990 | 0.802427 | 5.64E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene75990 | 0.811977 | 5.35E-51 | -1.69E-46 |
| MS.gene051628 | MS.gene75990 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene75990 | 0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene75990 | 0.852811 | 3.61E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene75990 | 0.858168 | 9.91E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene75990 | 0.808477 | 3.04E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene75990 | 0.808177 | 3.52E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene75990 | 0.815885 | 7.35E-52 | -1.69E-46 |
| MS.gene052239 | MS.gene75990 | -0.815878 | 7.38E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene75990 | 0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene052342 | MS.gene75990 | 0.800755 | 1.24E-48 | -1.69E-46 |
| MS.gene052397 | MS.gene75990 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene75990 | 0.83279 | 7.73E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene75990 | 0.854988 | 8.53E-62 | -1.69E-46 |
| MS.gene052519 | MS.gene75990 | 0.810495 | 1.12E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene75990 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene75990 | 0.819859 | 9.31E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene75990 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene75990 | 0.842219 | 2.96E-58 | -1.69E-46 |
| MS.gene052773 | MS.gene75990 | 0.816139 | 6.45E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene75990 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene75990 | 0.803895 | 2.80E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene75990 | 0.820437 | 6.86E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene75990 | 0.845718 | 3.41E-59 | -1.69E-46 |
| MS.gene053122 | MS.gene75990 | 0.825163 | 5.45E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene75990 | 0.823299 | 1.49E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene75990 | 0.855184 | 7.48E-62 | -1.69E-46 |
| MS.gene053542 | MS.gene75990 | 0.810869 | 9.30E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene75990 | 0.82201 | 2.98E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene75990 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene75990 | 0.868018 | 8.91E-66 | -1.69E-46 |
| MS.gene053931 | MS.gene75990 | 0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene75990 | 0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene75990 | 0.850327 | 1.82E-60 | -1.69E-46 |
| MS.gene054651 | MS.gene75990 | 0.837271 | 5.74E-57 | -1.69E-46 |
| MS.gene054775 | MS.gene75990 | 0.826584 | 2.50E-54 | -1.69E-46 |
| MS.gene055144 | MS.gene75990 | 0.813828 | 2.10E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene75990 | 0.821626 | 3.65E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene75990 | 0.806476 | 8.07E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene75990 | 0.808842 | 2.54E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene75990 | 0.871794 | 5.21E-67 | -1.69E-46 |
| MS.gene055466 | MS.gene75990 | 0.858154 | 1.00E-62 | -1.69E-46 |
| MS.gene055468 | MS.gene75990 | 0.860856 | 1.54E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene75990 | 0.837622 | 4.66E-57 | -1.69E-46 |
| MS.gene055512 | MS.gene75990 | 0.816521 | 5.30E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene75990 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene055580 | MS.gene75990 | -0.833089 | 6.51E-56 | -1.69E-46 |
| MS.gene055608 | MS.gene75990 | 0.81356 | 2.41E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene75990 | 0.802815 | 4.69E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene75990 | 0.819603 | 1.07E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene75990 | 0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene75990 | -0.826725 | 2.32E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene75990 | 0.808996 | 2.35E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene75990 | 0.811371 | 7.24E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene75990 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene75990 | 0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene056215 | MS.gene75990 | 0.821388 | 4.15E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene75990 | 0.854805 | 9.64E-62 | -1.69E-46 |
| MS.gene056553 | MS.gene75990 | 0.803036 | 4.22E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene75990 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene75990 | 0.813954 | 1.97E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene75990 | 0.804905 | 1.73E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene75990 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene75990 | 0.803176 | 3.95E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene75990 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene75990 | 0.814247 | 1.70E-51 | -1.69E-46 |
| MS.gene057287 | MS.gene75990 | 0.815154 | 1.07E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene75990 | 0.843901 | 1.05E-58 | -1.69E-46 |
| MS.gene057446 | MS.gene75990 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene75990 | 0.808981 | 2.37E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene75990 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene057694 | MS.gene75990 | 0.800343 | 1.51E-48 | -1.69E-46 |
| MS.gene057705 | MS.gene75990 | 0.804883 | 1.74E-49 | -1.69E-46 |
| MS.gene057855 | MS.gene75990 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene75990 | 0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene057890 | MS.gene75990 | -0.804705 | 1.90E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene75990 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene75990 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene75990 | 0.836169 | 1.10E-56 | -1.69E-46 |
| MS.gene058054 | MS.gene75990 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene058087 | MS.gene75990 | 0.809373 | 1.95E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene75990 | 0.832616 | 8.54E-56 | -1.69E-46 |
| MS.gene05847 | MS.gene75990 | 0.823505 | 1.34E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene75990 | 0.83629 | 1.02E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene75990 | 0.825011 | 5.91E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene75990 | 0.82344 | 1.38E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene75990 | 0.831234 | 1.87E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene75990 | 0.823022 | 1.73E-53 | -1.69E-46 |
| MS.gene05897 | MS.gene75990 | 0.803895 | 2.80E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene75990 | 0.805838 | 1.10E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene75990 | 0.819951 | 8.87E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene75990 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene059725 | MS.gene75990 | 0.818972 | 1.48E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene75990 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene75990 | 0.841838 | 3.73E-58 | -1.69E-46 |
| MS.gene059937 | MS.gene75990 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene75990 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene75990 | 0.811988 | 5.31E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene75990 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene75990 | 0.812111 | 5.00E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene75990 | 0.844547 | 7.07E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene75990 | 0.836586 | 8.58E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene75990 | 0.830091 | 3.57E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene75990 | 0.816951 | 4.24E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene75990 | 0.868762 | 5.13E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75990 | MS.gene22271 | PPI |
| MS.gene75990 | MS.gene015001 | PPI |
| MS.gene28843 | MS.gene75990 | PPI |
| MS.gene75990 | MS.gene32800 | PPI |
| MS.gene75990 | MS.gene042816 | PPI |
| MS.gene047484 | MS.gene75990 | PPI |
| MS.gene75990 | MS.gene069778 | PPI |
| MS.gene072669 | MS.gene75990 | PPI |
| MS.gene75990 | MS.gene024720 | PPI |
| MS.gene75990 | MS.gene83287 | PPI |
| MS.gene75990 | MS.gene066515 | PPI |
| MS.gene75990 | MS.gene21699 | PPI |
| MS.gene75990 | MS.gene062634 | PPI |
| MS.gene75990 | MS.gene00765 | PPI |
| MS.gene75990 | MS.gene37411 | PPI |
| MS.gene75990 | MS.gene050436 | PPI |
| MS.gene75990 | MS.gene21929 | PPI |
| MS.gene75990 | MS.gene27182 | PPI |
| MS.gene07091 | MS.gene75990 | PPI |
| MS.gene003010 | MS.gene75990 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75990.t1 | MTR_7g017690 | 95.534 | 627 | 27 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1159 |
| MS.gene75990.t1 | MTR_3g086660 | 51.278 | 587 | 232 | 9 | 7 | 548 | 17 | 594 | 1.75e-157 | 465 |
| MS.gene75990.t1 | MTR_2g075260 | 52.703 | 74 | 35 | 0 | 295 | 368 | 2 | 75 | 2.83e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75990.t1 | AT5G11390 | 38.462 | 663 | 350 | 12 | 10 | 616 | 37 | 697 | 8.12e-117 | 364 |
| MS.gene75990.t1 | AT1G68910 | 33.010 | 618 | 368 | 11 | 24 | 615 | 26 | 623 | 5.17e-80 | 265 |
| MS.gene75990.t1 | AT1G68910 | 34.752 | 564 | 325 | 10 | 24 | 564 | 26 | 569 | 1.93e-78 | 260 |
| MS.gene75990.t1 | AT1G68910 | 34.752 | 564 | 325 | 10 | 24 | 564 | 26 | 569 | 1.93e-78 | 260 |
Find 85 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTCATGCTGAGATTTC+TGG | 0.165736 | 7.3:-80696483 | MS.gene75990:CDS |
| GGTTCTGAGGTTAGAGATTT+GGG | 0.265934 | 7.3:-80696519 | MS.gene75990:CDS |
| GGGTTCTGAGGTTAGAGATT+TGG | 0.291296 | 7.3:-80696520 | MS.gene75990:CDS |
| AGGAAGAAGCAATCGAAGTT+TGG | 0.300071 | 7.3:-80695522 | MS.gene75990:CDS |
| TGATTTGTTATGTGGGGTGC+TGG | 0.301024 | 7.3:-80696541 | MS.gene75990:CDS |
| ATGACAACTGCAAAGAATAT+TGG | 0.308994 | 7.3:-80694707 | MS.gene75990:CDS |
| ACAGCTGAAGCAGTTAATTT+AGG | 0.314252 | 7.3:-80695304 | MS.gene75990:CDS |
| TGATGAAGAAAACATCGATA+TGG | 0.316839 | 7.3:-80696589 | MS.gene75990:CDS |
| TATGATGAATTTGGAAACTT+TGG | 0.334665 | 7.3:-80696637 | MS.gene75990:CDS |
| CTTTCTCAGTTCAATTTGAT+TGG | 0.338086 | 7.3:-80695424 | MS.gene75990:CDS |
| GAGGATGCTTGAGAAATCTT+TGG | 0.339008 | 7.3:-80695647 | MS.gene75990:CDS |
| GTTGGAGGTGTTTCAGATAA+TGG | 0.340110 | 7.3:-80696729 | MS.gene75990:CDS |
| CTTCATTTGAAATTCCCTTC+AGG | 0.351204 | 7.3:+80695464 | None:intergenic |
| CAGCAGGCAGTAGCGTCTGC+TGG | 0.352082 | 7.3:-80694959 | MS.gene75990:CDS |
| TTTGAGTTTGATTTGTTATG+TGG | 0.355398 | 7.3:-80696549 | MS.gene75990:CDS |
| TGCGACCTTTATGTATTTCA+AGG | 0.366461 | 7.3:-80691871 | MS.gene75990:CDS |
| TTTGCTGACACAGTTGGCTT+TGG | 0.366680 | 7.3:-80694660 | MS.gene75990:CDS |
| AACTTTGGAAGGTGAATTAG+AGG | 0.372115 | 7.3:-80696622 | MS.gene75990:CDS |
| AGCAAGCGAGAACAAACTTT+TGG | 0.375212 | 7.3:-80693637 | MS.gene75990:CDS |
| GTGTTACACAATTGAAGATA+TGG | 0.376803 | 7.3:-80694909 | MS.gene75990:CDS |
| TTGAGTTTGATTTGTTATGT+GGG | 0.386095 | 7.3:-80696548 | MS.gene75990:CDS |
| AAGTTTCTTGAGGAGTAGAT+TGG | 0.388441 | 7.3:-80694771 | MS.gene75990:CDS |
| TTTCTTTCAATTCTACGATA+AGG | 0.399271 | 7.3:+80695152 | None:intergenic |
| GAGATTCTTCTTTGAACGAT+TGG | 0.400387 | 7.3:-80696449 | MS.gene75990:CDS |
| TCGAAATTTGATCATCCTCT+TGG | 0.400430 | 7.3:+80695722 | None:intergenic |
| GGAAGAAGCAATCGAAGTTT+GGG | 0.409580 | 7.3:-80695521 | MS.gene75990:CDS |
| AGATATGGAACATGTGATAA+AGG | 0.420057 | 7.3:-80694894 | MS.gene75990:CDS |
| CTCCTCACAGTCCCAACATC+TGG | 0.435438 | 7.3:+80691960 | None:intergenic |
| GACTTTGTCTTCTTATAAGA+AGG | 0.441599 | 7.3:-80696358 | MS.gene75990:CDS |
| GGGAATTTCAAATGAAGTGT+TGG | 0.466188 | 7.3:-80695458 | MS.gene75990:CDS |
| TTCCAGCTTATCTCTAAGCT+CGG | 0.467512 | 7.3:+80695384 | None:intergenic |
| AGACTTTCACATTCACCAAC+TGG | 0.472930 | 7.3:+80695236 | None:intergenic |
| ACTGAAGCAAACATATAAGA+AGG | 0.478500 | 7.3:-80693607 | MS.gene75990:CDS |
| ATCCGAGCTTAGAGATAAGC+TGG | 0.490624 | 7.3:-80695386 | MS.gene75990:CDS |
| TTAACTCGTCTTCTAAAGAA+AGG | 0.496891 | 7.3:+80695554 | None:intergenic |
| GATTTGTTATGTGGGGTGCT+GGG | 0.499035 | 7.3:-80696540 | MS.gene75990:CDS |
| CAGATTCAATACCAGATGTT+GGG | 0.500850 | 7.3:-80691971 | MS.gene75990:CDS |
| GACTGATTTACAGCTGCAGC+AGG | 0.504375 | 7.3:-80694975 | MS.gene75990:CDS |
| CAAGTCCTTGAAATACATAA+AGG | 0.506472 | 7.3:+80691866 | None:intergenic |
| ATGTGGGGTGCTGGGTTCTG+AGG | 0.507959 | 7.3:-80696532 | MS.gene75990:CDS |
| GAACGATTGGCAAGAGAGGT+TGG | 0.512420 | 7.3:-80696436 | MS.gene75990:CDS |
| GTTACTTGAAAGGCAGCTAA+AGG | 0.514392 | 7.3:-80694999 | MS.gene75990:CDS |
| GAGAGAGCGTCTTAATAAGA+AGG | 0.518789 | 7.3:-80694636 | MS.gene75990:intron |
| GAGTAGATTGGAATGCTTGG+AGG | 0.519165 | 7.3:-80694759 | MS.gene75990:CDS |
| TCAGATTCAATACCAGATGT+TGG | 0.521726 | 7.3:-80691972 | MS.gene75990:CDS |
| AAGTTTGTTCTCGCTTGCTA+AGG | 0.523128 | 7.3:+80693641 | None:intergenic |
| TTTGTTCTCGCTTGCTAAGG+AGG | 0.527329 | 7.3:+80693644 | None:intergenic |
| GATAAAGGATCTTAAGTCAA+AGG | 0.527438 | 7.3:-80694879 | MS.gene75990:CDS |
| TAAAAGTTTGCTGACACAGT+TGG | 0.530211 | 7.3:-80694666 | MS.gene75990:CDS |
| CTTTGAACGATTGGCAAGAG+AGG | 0.530964 | 7.3:-80696440 | MS.gene75990:CDS |
| CAAAGTGTTGAAGATAATAC+CGG | 0.537217 | 7.3:-80696762 | MS.gene75990:CDS |
| GAGGAGTAGATTGGAATGCT+TGG | 0.538497 | 7.3:-80694762 | MS.gene75990:CDS |
| AGATAATGGAGAAGTTATTG+TGG | 0.538820 | 7.3:-80696715 | MS.gene75990:CDS |
| ACGAGGAAGTAAGTTTCTTG+AGG | 0.550455 | 7.3:-80694781 | MS.gene75990:CDS |
| AGTTTGGGAAAGATTGTTTG+AGG | 0.560777 | 7.3:-80695506 | MS.gene75990:CDS |
| AGAGAGGTTGGTTGAATCTG+AGG | 0.561990 | 7.3:-80696424 | MS.gene75990:CDS |
| GACTTTGTCTTCTGAGCATG+AGG | 0.562788 | 7.3:-80693562 | MS.gene75990:intron |
| ATGAATTTGGAAACTTTGGA+AGG | 0.568364 | 7.3:-80696633 | MS.gene75990:CDS |
| ATACTGTTGCTGATATTCAT+CGG | 0.568555 | 7.3:+80695210 | None:intergenic |
| TGAGTTTGATTTGTTATGTG+GGG | 0.573199 | 7.3:-80696547 | MS.gene75990:CDS |
| TCTTATAAGAAGGAAGAGAA+TGG | 0.577851 | 7.3:-80696348 | MS.gene75990:intron |
| ACCTCCAACATCAACATCAC+CGG | 0.581822 | 7.3:+80696743 | None:intergenic |
| ACCGGTGATGTTGATGTTGG+AGG | 0.584105 | 7.3:-80696744 | MS.gene75990:CDS |
| AGTAGATTGGAATGCTTGGA+GGG | 0.587529 | 7.3:-80694758 | MS.gene75990:CDS |
| TGCACTGTCAGCTAGACTCT+CGG | 0.590430 | 7.3:+80694847 | None:intergenic |
| AATACCGGTGATGTTGATGT+TGG | 0.597119 | 7.3:-80696747 | MS.gene75990:CDS |
| ACTGTGAGGAGAATAGATGC+AGG | 0.607917 | 7.3:-80691948 | MS.gene75990:CDS |
| GGAGGGATCACTGCAGAAAG+CGG | 0.612584 | 7.3:-80694741 | MS.gene75990:CDS |
| AGAGTGTAGAGTTACTTGAA+AGG | 0.618606 | 7.3:-80695009 | MS.gene75990:CDS |
| CTGAAGCAAACATATAAGAA+GGG | 0.621626 | 7.3:-80693606 | MS.gene75990:CDS |
| GTGTTCTCAAGTTAGAGACA+TGG | 0.624574 | 7.3:-80695179 | MS.gene75990:CDS |
| GAGTCTAGCTGACAGTGCAG+AGG | 0.624641 | 7.3:-80694843 | MS.gene75990:CDS |
| TTGAAGAAAAGCTAAATCTG+AGG | 0.628560 | 7.3:-80695579 | MS.gene75990:CDS |
| TACCAGATGTTGGGACTGTG+AGG | 0.630861 | 7.3:-80691962 | MS.gene75990:CDS |
| AGACGAGTTAATTCAAACAG+AGG | 0.633790 | 7.3:-80695542 | MS.gene75990:CDS |
| ACAAGAAACTGAATGCCAGT+TGG | 0.639494 | 7.3:-80695251 | MS.gene75990:CDS |
| ACTTTGGAAGGTGAATTAGA+GGG | 0.646483 | 7.3:-80696621 | MS.gene75990:CDS |
| CAATGCGCGTGAGATCCTGA+AGG | 0.651405 | 7.3:-80695479 | MS.gene75990:CDS |
| AACTAATGAAGAACTCAACA+AGG | 0.662178 | 7.3:-80695068 | MS.gene75990:CDS |
| GGGATCACTGCAGAAAGCGG+AGG | 0.666512 | 7.3:-80694738 | MS.gene75990:CDS |
| ACAACAGGGAATGTTGAAGA+CGG | 0.671738 | 7.3:-80695754 | MS.gene75990:intron |
| AATGCGCGTGAGATCCTGAA+GGG | 0.678003 | 7.3:-80695478 | MS.gene75990:CDS |
| ATCTAATGCTGATTTAAACG+AGG | 0.690867 | 7.3:-80694798 | MS.gene75990:CDS |
| ACAGGGAATGTTGAAGACGG+TGG | 0.694865 | 7.3:-80695751 | MS.gene75990:intron |
| AGACGGTGGAAATGTCCAAG+AGG | 0.721239 | 7.3:-80695737 | MS.gene75990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTTATATAATAATAA+TGG | + | chr7.3:80694329-80694348 | None:intergenic | 10.0% |
| !! | TTATTAGAAATGAAAATTTA+GGG | + | chr7.3:80692804-80692823 | None:intergenic | 10.0% |
| !! | TTTACCATTATTATTATATA+AGG | - | chr7.3:80694322-80694341 | MS.gene75990:intron | 10.0% |
| !! | TTTATTAGAAATGAAAATTT+AGG | + | chr7.3:80692805-80692824 | None:intergenic | 10.0% |
| !!! | GTTAAATATTTTTCTTTTTA+TGG | - | chr7.3:80695682-80695701 | MS.gene75990:CDS | 10.0% |
| !!! | TTGTTTTAAAAAATAAGAAA+AGG | - | chr7.3:80692519-80692538 | MS.gene75990:intron | 10.0% |
| !! | AATAAATAAAGAACAATATC+AGG | + | chr7.3:80696432-80696451 | None:intergenic | 15.0% |
| !! | ATTCAAATACTGAAATATAT+AGG | + | chr7.3:80694647-80694666 | None:intergenic | 15.0% |
| !!! | ACATAAATGTTTAAAACAAA+TGG | + | chr7.3:80694872-80694891 | None:intergenic | 15.0% |
| !!! | ATATTTTGAAACAATTGTTA+AGG | + | chr7.3:80695572-80695591 | None:intergenic | 15.0% |
| !!! | CATAAATGTTTAAAACAAAT+GGG | + | chr7.3:80694871-80694890 | None:intergenic | 15.0% |
| !!! | TACTATTTCTATTAAATTGT+TGG | - | chr7.3:80695913-80695932 | MS.gene75990:intron | 15.0% |
| !! | AAATGTATTTGTTTCATCTT+AGG | - | chr7.3:80695149-80695168 | MS.gene75990:CDS | 20.0% |
| !! | AATAGCATTAAATACAATGA+AGG | + | chr7.3:80696076-80696095 | None:intergenic | 20.0% |
| !! | AATGTATTTGTTTCATCTTA+GGG | - | chr7.3:80695150-80695169 | MS.gene75990:CDS | 20.0% |
| !! | ATAAAAATATTCTCATTGGT+CGG | + | chr7.3:80692581-80692600 | None:intergenic | 20.0% |
| !! | ATATCACATGAAAATTAATC+TGG | + | chr7.3:80692432-80692451 | None:intergenic | 20.0% |
| !! | ATTAATCAACATAAATAACC+AGG | - | chr7.3:80694113-80694132 | MS.gene75990:intron | 20.0% |
| !! | CAAAAATATGTCTCTAAATA+TGG | + | chr7.3:80695194-80695213 | None:intergenic | 20.0% |
| !! | GAAAAATATTTAACTAAGCT+AGG | + | chr7.3:80695676-80695695 | None:intergenic | 20.0% |
| !! | TAATTCATATACACAATCAA+TGG | + | chr7.3:80692779-80692798 | None:intergenic | 20.0% |
| !! | TCAGATAAAAATATTCTCAT+TGG | + | chr7.3:80692585-80692604 | None:intergenic | 20.0% |
| !! | TTAATCAACATAAATAACCA+GGG | - | chr7.3:80694114-80694133 | MS.gene75990:intron | 20.0% |
| !!! | AACAATCTTTTAGTTTTGAA+AGG | - | chr7.3:80692236-80692255 | MS.gene75990:intron | 20.0% |
| !!! | ATAAAATAAAAAGCATAGTC+TGG | + | chr7.3:80694235-80694254 | None:intergenic | 20.0% |
| !!! | GAGTATTTTTATGATGAATT+TGG | - | chr7.3:80691970-80691989 | MS.gene75990:CDS | 20.0% |
| !!! | GTATGTTTAAGTTACATAAA+AGG | + | chr7.3:80694382-80694401 | None:intergenic | 20.0% |
| !!! | TAAAGTGTTATTTGTTAGTT+AGG | - | chr7.3:80695787-80695806 | MS.gene75990:intron | 20.0% |
| !!! | TGTTTCATCTATAGTTTTTT+TGG | - | chr7.3:80695508-80695527 | MS.gene75990:CDS | 20.0% |
| ! | AAAATCAAAGAGGAGAAAAA+AGG | + | chr7.3:80694690-80694709 | None:intergenic | 25.0% |
| ! | AAACAATTTGAACACACTAA+TGG | + | chr7.3:80695493-80695512 | None:intergenic | 25.0% |
| ! | AAATCAAAGAGGAGAAAAAA+GGG | + | chr7.3:80694689-80694708 | None:intergenic | 25.0% |
| ! | AAGGACAAAAATTTCAACTA+AGG | + | chr7.3:80694939-80694958 | None:intergenic | 25.0% |
| ! | AATACTGAAATATATAGGTG+AGG | + | chr7.3:80694642-80694661 | None:intergenic | 25.0% |
| ! | AGCATTATTGAAGTGTATTA+TGG | + | chr7.3:80696103-80696122 | None:intergenic | 25.0% |
| ! | AGTTCAGTGTAAAAAATTGA+CGG | - | chr7.3:80693524-80693543 | MS.gene75990:intron | 25.0% |
| ! | ATAAAGAACAATATCAGGAA+AGG | + | chr7.3:80696427-80696446 | None:intergenic | 25.0% |
| ! | ATAATACACTTCAATAATGC+TGG | - | chr7.3:80696102-80696121 | MS.gene75990:intron | 25.0% |
| ! | ATTATGGTATTATCTTCTGT+TGG | - | chr7.3:80696298-80696317 | MS.gene75990:intron | 25.0% |
| ! | GAAAAATAGAGACGTTAATT+TGG | - | chr7.3:80693272-80693291 | MS.gene75990:intron | 25.0% |
| ! | GAAAATCCAACACATAAAAA+TGG | + | chr7.3:80692838-80692857 | None:intergenic | 25.0% |
| ! | GTAAAACATTGTCTTGTATT+AGG | - | chr7.3:80695448-80695467 | MS.gene75990:CDS | 25.0% |
| ! | GTAATAACAGAAGAGAAATA+TGG | - | chr7.3:80696532-80696551 | MS.gene75990:CDS | 25.0% |
| ! | TATGATGAATTTGGAAACTT+TGG | - | chr7.3:80691979-80691998 | MS.gene75990:CDS | 25.0% |
| ! | TATTCAAGAGAGATATTATC+AGG | + | chr7.3:80694063-80694082 | None:intergenic | 25.0% |
| ! | TTAACAACTGTAGTTATGTA+TGG | - | chr7.3:80694729-80694748 | MS.gene75990:CDS | 25.0% |
| ! | TTCGTTTAGTTGTTAGAAAA+GGG | - | chr7.3:80692391-80692410 | MS.gene75990:intron | 25.0% |
| ! | TTTCAATGTACTAACATTCA+TGG | - | chr7.3:80695636-80695655 | MS.gene75990:CDS | 25.0% |
| ! | TTTCGTTTAGTTGTTAGAAA+AGG | - | chr7.3:80692390-80692409 | MS.gene75990:intron | 25.0% |
| ! | TTTCTTTCAATTCTACGATA+AGG | + | chr7.3:80693467-80693486 | None:intergenic | 25.0% |
| !! | ATTTGATTCTAAAAAAGTGC+TGG | + | chr7.3:80694281-80694300 | None:intergenic | 25.0% |
| !! | GTTTAAGTTACATAAAAGGT+TGG | + | chr7.3:80694378-80694397 | None:intergenic | 25.0% |
| !! | TTTTACGACAAAGTTATCTT+TGG | - | chr7.3:80695249-80695268 | MS.gene75990:CDS | 25.0% |
| !!! | AAAAGTTGATACGACATATA+AGG | + | chr7.3:80695757-80695776 | None:intergenic | 25.0% |
| !!! | ATGCACATATTATTTCTAAC+CGG | + | chr7.3:80695866-80695885 | None:intergenic | 25.0% |
| !!! | CAGCAAACTTTTAAAAACTT+TGG | + | chr7.3:80693943-80693962 | None:intergenic | 25.0% |
| !!! | CATGAAACATTCATGTTTTT+TGG | - | chr7.3:80696024-80696043 | MS.gene75990:intron | 25.0% |
| !!! | CTTCAATCAAGTTGATTTAT+AGG | + | chr7.3:80694787-80694806 | None:intergenic | 25.0% |
| !!! | GATATGGATTGTGTTTTAAA+GGG | - | chr7.3:80692043-80692062 | MS.gene75990:intron | 25.0% |
| !!! | TTGAGTTTGATTTGTTATGT+GGG | - | chr7.3:80692068-80692087 | MS.gene75990:intron | 25.0% |
| !!! | TTTGAGTTTGATTTGTTATG+TGG | - | chr7.3:80692067-80692086 | MS.gene75990:intron | 25.0% |
| !!! | TTTTGAAACAATTGTTAAGG+AGG | + | chr7.3:80695569-80695588 | None:intergenic | 25.0% |
| AAAAAGACTAACAAGCTCAT+AGG | + | chr7.3:80694419-80694438 | None:intergenic | 30.0% | |
| AACAGAAATATACTGCCAAT+AGG | + | chr7.3:80695618-80695637 | None:intergenic | 30.0% | |
| AACTAATGAAGAACTCAACA+AGG | - | chr7.3:80693548-80693567 | MS.gene75990:intron | 30.0% | |
| AACTACAGTTGTTAAACTCA+AGG | + | chr7.3:80694724-80694743 | None:intergenic | 30.0% | |
| AATTTCAACTAAGGATGAAC+AGG | + | chr7.3:80694930-80694949 | None:intergenic | 30.0% | |
| ACAATTAAAACGAGAAGAGT+CGG | - | chr7.3:80696128-80696147 | MS.gene75990:intron | 30.0% | |
| ACTGAAGCAAACATATAAGA+AGG | - | chr7.3:80695009-80695028 | MS.gene75990:CDS | 30.0% | |
| AGATATGGAACATGTGATAA+AGG | - | chr7.3:80693722-80693741 | MS.gene75990:intron | 30.0% | |
| ATACTGTTGCTGATATTCAT+CGG | + | chr7.3:80693409-80693428 | None:intergenic | 30.0% | |
| ATGAACTAGTGGGAAAAAAA+AGG | + | chr7.3:80695414-80695433 | None:intergenic | 30.0% | |
| ATGAATTTGGAAACTTTGGA+AGG | - | chr7.3:80691983-80692002 | MS.gene75990:CDS | 30.0% | |
| ATGACAACTGCAAAGAATAT+TGG | - | chr7.3:80693909-80693928 | MS.gene75990:intron | 30.0% | |
| CAACTTGATTGAAGATTCAT+AGG | - | chr7.3:80694793-80694812 | MS.gene75990:CDS | 30.0% | |
| CAAGTCCTTGAAATACATAA+AGG | + | chr7.3:80696753-80696772 | None:intergenic | 30.0% | |
| CGGCAATAAATCTCATAAAA+GGG | - | chr7.3:80696148-80696167 | MS.gene75990:intron | 30.0% | |
| CTGAAGCAAACATATAAGAA+GGG | - | chr7.3:80695010-80695029 | MS.gene75990:CDS | 30.0% | |
| CTTAAAAATGGACCTATAAC+AGG | - | chr7.3:80694533-80694552 | MS.gene75990:intron | 30.0% | |
| CTTTCTCAGTTCAATTTGAT+TGG | - | chr7.3:80693192-80693211 | MS.gene75990:intron | 30.0% | |
| GAAACAAGATTTCAAAAGCT+TGG | + | chr7.3:80694012-80694031 | None:intergenic | 30.0% | |
| GACTTTGTCTTCTTATAAGA+AGG | - | chr7.3:80692258-80692277 | MS.gene75990:intron | 30.0% | |
| GAGTTCCATTAATGCAAAAT+AGG | + | chr7.3:80692492-80692511 | None:intergenic | 30.0% | |
| GATAAAGGATCTTAAGTCAA+AGG | - | chr7.3:80693737-80693756 | MS.gene75990:intron | 30.0% | |
| GTGTTACACAATTGAAGATA+TGG | - | chr7.3:80693707-80693726 | MS.gene75990:intron | 30.0% | |
| TAAACAACTTTCAAAATGCC+AGG | - | chr7.3:80694505-80694524 | MS.gene75990:intron | 30.0% | |
| TAACAACTAAACGAAAAGAC+AGG | + | chr7.3:80692386-80692405 | None:intergenic | 30.0% | |
| TATGAAGTCACACATATGAT+TGG | + | chr7.3:80692675-80692694 | None:intergenic | 30.0% | |
| TCGGCAATAAATCTCATAAA+AGG | - | chr7.3:80696147-80696166 | MS.gene75990:intron | 30.0% | |
| TCTTATAAGAAGGAAGAGAA+TGG | - | chr7.3:80692268-80692287 | MS.gene75990:intron | 30.0% | |
| TGAAAGTGGAAAAATCAAAG+AGG | + | chr7.3:80694700-80694719 | None:intergenic | 30.0% | |
| TGATGAAGAAAACATCGATA+TGG | - | chr7.3:80692027-80692046 | MS.gene75990:intron | 30.0% | |
| TTGAAGAAAAGCTAAATCTG+AGG | - | chr7.3:80693037-80693056 | MS.gene75990:intron | 30.0% | |
| ! | AAAATGACTTGCATAAGTAG+TGG | - | chr7.3:80695220-80695239 | MS.gene75990:CDS | 30.0% |
| ! | AAACGCCTATTTTGCATTAA+TGG | - | chr7.3:80692484-80692503 | MS.gene75990:intron | 30.0% |
| ! | AGCAACATAGAAACATTTTG+AGG | - | chr7.3:80692950-80692969 | MS.gene75990:intron | 30.0% |
| ! | ATAATTTGTGTCAACAAGAG+GGG | - | chr7.3:80694160-80694179 | MS.gene75990:intron | 30.0% |
| ! | ATGACTACTTTGAGAATGTT+AGG | + | chr7.3:80694577-80694596 | None:intergenic | 30.0% |
| ! | GATAATTTGTGTCAACAAGA+GGG | - | chr7.3:80694159-80694178 | MS.gene75990:intron | 30.0% |
| ! | TGATAATTTGTGTCAACAAG+AGG | - | chr7.3:80694158-80694177 | MS.gene75990:intron | 30.0% |
| ! | TTAACTCGTCTTCTAAAGAA+AGG | + | chr7.3:80693065-80693084 | None:intergenic | 30.0% |
| ! | TTGGATTTTCAATGACAACA+GGG | - | chr7.3:80692848-80692867 | MS.gene75990:intron | 30.0% |
| !! | AGATAATGGAGAAGTTATTG+TGG | - | chr7.3:80691901-80691920 | MS.gene75990:CDS | 30.0% |
| !! | ATCTAATGCTGATTTAAACG+AGG | - | chr7.3:80693818-80693837 | MS.gene75990:intron | 30.0% |
| !! | CAAAGTGTTGAAGATAATAC+CGG | - | chr7.3:80691854-80691873 | MS.gene75990:CDS | 30.0% |
| !! | CGATATGGATTGTGTTTTAA+AGG | - | chr7.3:80692042-80692061 | MS.gene75990:intron | 30.0% |
| !! | CTGTTATAGGTCCATTTTTA+AGG | + | chr7.3:80694535-80694554 | None:intergenic | 30.0% |
| !! | TAGAGATTTGGGTTTGTTTT+TGG | - | chr7.3:80692108-80692127 | MS.gene75990:intron | 30.0% |
| !! | TGAGTTTGATTTGTTATGTG+GGG | - | chr7.3:80692069-80692088 | MS.gene75990:intron | 30.0% |
| !! | TGCACATATTATTTCTAACC+GGG | + | chr7.3:80695865-80695884 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTCTCTAACTAT+TGG | - | chr7.3:80695525-80695544 | MS.gene75990:CDS | 30.0% |
| !!! | TTTTTTTTCCCACTAGTTCA+TGG | - | chr7.3:80695413-80695432 | MS.gene75990:CDS | 30.0% |
| AAAGGAAAGGACAATTTGGA+AGG | + | chr7.3:80696409-80696428 | None:intergenic | 35.0% | |
| AAGTTTCTTGAGGAGTAGAT+TGG | - | chr7.3:80693845-80693864 | MS.gene75990:intron | 35.0% | |
| ACAGCTGAAGCAGTTAATTT+AGG | - | chr7.3:80693312-80693331 | MS.gene75990:intron | 35.0% | |
| ACCATAATACTTACTCCCTT+CGG | + | chr7.3:80696286-80696305 | None:intergenic | 35.0% | |
| ACTGAAATATATAGGTGAGG+TGG | + | chr7.3:80694639-80694658 | None:intergenic | 35.0% | |
| AGACGAGTTAATTCAAACAG+AGG | - | chr7.3:80693074-80693093 | MS.gene75990:intron | 35.0% | |
| AGAGTGTAGAGTTACTTGAA+AGG | - | chr7.3:80693607-80693626 | MS.gene75990:CDS | 35.0% | |
| AGTTAGAACATTAGCATTGC+TGG | + | chr7.3:80692724-80692743 | None:intergenic | 35.0% | |
| AGTTTGGGAAAGATTGTTTG+AGG | - | chr7.3:80693110-80693129 | MS.gene75990:intron | 35.0% | |
| ATAGGATGAACATTTAGCAG+TGG | - | chr7.3:80694811-80694830 | MS.gene75990:CDS | 35.0% | |
| ATGGACCTATAACAGGTAAT+AGG | - | chr7.3:80694540-80694559 | MS.gene75990:intron | 35.0% | |
| CAGATTCAATACCAGATGTT+GGG | - | chr7.3:80696645-80696664 | MS.gene75990:CDS | 35.0% | |
| CATATGTGTGACTTCATAAG+TGG | - | chr7.3:80692677-80692696 | MS.gene75990:intron | 35.0% | |
| CTGAAATATATAGGTGAGGT+GGG | + | chr7.3:80694638-80694657 | None:intergenic | 35.0% | |
| GAACAATATCAGGAAAGGAA+AGG | + | chr7.3:80696422-80696441 | None:intergenic | 35.0% | |
| GAGATATTATCAGGTCTCTA+TGG | + | chr7.3:80694054-80694073 | None:intergenic | 35.0% | |
| GAGATTCTTCTTTGAACGAT+TGG | - | chr7.3:80692167-80692186 | MS.gene75990:intron | 35.0% | |
| GGGAATTTCAAATGAAGTGT+TGG | - | chr7.3:80693158-80693177 | MS.gene75990:intron | 35.0% | |
| GTTAAGGAGGATTGATAAGA+AGG | + | chr7.3:80695556-80695575 | None:intergenic | 35.0% | |
| TATACTGCCAATAGGATGTT+TGG | + | chr7.3:80695610-80695629 | None:intergenic | 35.0% | |
| TCAGATTCAATACCAGATGT+TGG | - | chr7.3:80696644-80696663 | MS.gene75990:CDS | 35.0% | |
| TCGAAATTTGATCATCCTCT+TGG | + | chr7.3:80692897-80692916 | None:intergenic | 35.0% | |
| TCTATGGCAGTATAATGTAG+TGG | + | chr7.3:80694038-80694057 | None:intergenic | 35.0% | |
| TGCGACCTTTATGTATTTCA+AGG | - | chr7.3:80696745-80696764 | MS.gene75990:CDS | 35.0% | |
| TTCCCCTGGAAAAGAAAAAT+AGG | + | chr7.3:80696581-80696600 | None:intergenic | 35.0% | |
| ! | AACTTTGGAAGGTGAATTAG+AGG | - | chr7.3:80691994-80692013 | MS.gene75990:CDS | 35.0% |
| ! | ACTTTGGAAGGTGAATTAGA+GGG | - | chr7.3:80691995-80692014 | MS.gene75990:CDS | 35.0% |
| ! | AGAGTCTAGATTTTTCACAC+TGG | + | chr7.3:80692639-80692658 | None:intergenic | 35.0% |
| ! | ATAAAAAGCATAGTCTGGCT+TGG | + | chr7.3:80694230-80694249 | None:intergenic | 35.0% |
| ! | CTTCATTTGAAATTCCCTTC+AGG | + | chr7.3:80693155-80693174 | None:intergenic | 35.0% |
| ! | GTTGGATTTTCAATGACAAC+AGG | - | chr7.3:80692847-80692866 | MS.gene75990:intron | 35.0% |
| ! | TAAAAAGCATAGTCTGGCTT+GGG | + | chr7.3:80694229-80694248 | None:intergenic | 35.0% |
| ! | TTTTTGCTTACAATCGAGAC+CGG | + | chr7.3:80696003-80696022 | None:intergenic | 35.0% |
| !! | CTATTGTATGGCTTTGGATA+TGG | - | chr7.3:80695330-80695349 | MS.gene75990:CDS | 35.0% |
| !! | CTCCTATTTTTCTTTTCCAG+GGG | - | chr7.3:80696576-80696595 | MS.gene75990:CDS | 35.0% |
| !! | CTGACTCTTTTAAAAGACTC+TGG | - | chr7.3:80693573-80693592 | MS.gene75990:CDS | 35.0% |
| !! | GCTCCTATTTTTCTTTTCCA+GGG | - | chr7.3:80696575-80696594 | MS.gene75990:CDS | 35.0% |
| !! | TAAAAGTTTGCTGACACAGT+TGG | - | chr7.3:80693950-80693969 | MS.gene75990:intron | 35.0% |
| !! | TAGAAAAGGGTATCGTATGT+GGG | - | chr7.3:80692404-80692423 | MS.gene75990:intron | 35.0% |
| !! | TCTTTTTATGGTAGTCTTGC+TGG | - | chr7.3:80695694-80695713 | MS.gene75990:CDS | 35.0% |
| !! | TGCTCCTATTTTTCTTTTCC+AGG | - | chr7.3:80696574-80696593 | MS.gene75990:CDS | 35.0% |
| !! | TGCTGTCCATTTTTATGTGT+TGG | - | chr7.3:80692829-80692848 | MS.gene75990:intron | 35.0% |
| !! | TTAGAAAAGGGTATCGTATG+TGG | - | chr7.3:80692403-80692422 | MS.gene75990:intron | 35.0% |
| !!! | AAGTTCTACCTGTTTTTGTC+TGG | - | chr7.3:80695366-80695385 | MS.gene75990:CDS | 35.0% |
| !!! | TAAATTGTTGGCTCCGATTT+TGG | - | chr7.3:80695925-80695944 | MS.gene75990:intron | 35.0% |
| !!! | TGTGGATTTTGAAATGAGTG+TGG | - | chr7.3:80691919-80691938 | MS.gene75990:CDS | 35.0% |
| AACATTCATGGCATGCTTCT+AGG | - | chr7.3:80695648-80695667 | MS.gene75990:CDS | 40.0% | |
| AATACCGGTGATGTTGATGT+TGG | - | chr7.3:80691869-80691888 | MS.gene75990:CDS | 40.0% | |
| AATACTTACTCCCTTCGGTT+CGG | + | chr7.3:80696281-80696300 | None:intergenic | 40.0% | |
| ACAACAGGGAATGTTGAAGA+CGG | - | chr7.3:80692862-80692881 | MS.gene75990:intron | 40.0% | |
| ACAACTTTCAAAATGCCAGG+TGG | - | chr7.3:80694508-80694527 | MS.gene75990:intron | 40.0% | |
| ACAAGAAACTGAATGCCAGT+TGG | - | chr7.3:80693365-80693384 | MS.gene75990:intron | 40.0% | |
| ACACTTCATGCTGAGATTTC+TGG | - | chr7.3:80692133-80692152 | MS.gene75990:intron | 40.0% | |
| ACCGAAGGGAGTAAGTATTA+TGG | - | chr7.3:80696282-80696301 | MS.gene75990:intron | 40.0% | |
| ACGAGGAAGTAAGTTTCTTG+AGG | - | chr7.3:80693835-80693854 | MS.gene75990:intron | 40.0% | |
| ACTATCTGTTCGCATTGTAC+AGG | + | chr7.3:80695963-80695982 | None:intergenic | 40.0% | |
| ACTCTCCTATGATTCAGTTC+AGG | + | chr7.3:80696326-80696345 | None:intergenic | 40.0% | |
| AGACTTTCACATTCACCAAC+TGG | + | chr7.3:80693383-80693402 | None:intergenic | 40.0% | |
| AGCTACTACCAGACAAAAAC+AGG | + | chr7.3:80695377-80695396 | None:intergenic | 40.0% | |
| AGGAAGAAGCAATCGAAGTT+TGG | - | chr7.3:80693094-80693113 | MS.gene75990:intron | 40.0% | |
| AGTAGATTGGAATGCTTGGA+GGG | - | chr7.3:80693858-80693877 | MS.gene75990:intron | 40.0% | |
| ATAGGATGTTTGGACATGAG+TGG | + | chr7.3:80695600-80695619 | None:intergenic | 40.0% | |
| ATCACCAATCCATGAACTAG+TGG | + | chr7.3:80695425-80695444 | None:intergenic | 40.0% | |
| ATGCAGATCAATTGATACCC+TGG | + | chr7.3:80694134-80694153 | None:intergenic | 40.0% | |
| CAGGAAAGGAAAGGACAATT+TGG | + | chr7.3:80696413-80696432 | None:intergenic | 40.0% | |
| CTCATGTCCAAACATCCTAT+TGG | - | chr7.3:80695600-80695619 | MS.gene75990:CDS | 40.0% | |
| GAGGATGCTTGAGAAATCTT+TGG | - | chr7.3:80692969-80692988 | MS.gene75990:intron | 40.0% | |
| GGAAGAAGCAATCGAAGTTT+GGG | - | chr7.3:80693095-80693114 | MS.gene75990:intron | 40.0% | |
| GTAAACACAGTTACTTCCTC+CGG | - | chr7.3:80695981-80696000 | MS.gene75990:intron | 40.0% | |
| GTGTTCTCAAGTTAGAGACA+TGG | - | chr7.3:80693437-80693456 | MS.gene75990:intron | 40.0% | |
| GTTAAACTCAAGGCTGAAAG+TGG | + | chr7.3:80694714-80694733 | None:intergenic | 40.0% | |
| GTTACTTGAAAGGCAGCTAA+AGG | - | chr7.3:80693617-80693636 | MS.gene75990:CDS | 40.0% | |
| TATATAGGTGAGGTGGGAAT+CGG | + | chr7.3:80694632-80694651 | None:intergenic | 40.0% | |
| TCACCAATCCATGAACTAGT+GGG | + | chr7.3:80695424-80695443 | None:intergenic | 40.0% | |
| TCTGGCCTATTACCTGTTAT+AGG | + | chr7.3:80694548-80694567 | None:intergenic | 40.0% | |
| TGTGCATAAAGCATGCTATG+TGG | - | chr7.3:80695879-80695898 | MS.gene75990:intron | 40.0% | |
| TTCCAGCTTATCTCTAAGCT+CGG | + | chr7.3:80693235-80693254 | None:intergenic | 40.0% | |
| TTCTCAAAGTAGTCATGCTC+AGG | - | chr7.3:80694581-80694600 | MS.gene75990:intron | 40.0% | |
| TTTCCCACTAGTTCATGGAT+TGG | - | chr7.3:80695418-80695437 | MS.gene75990:CDS | 40.0% | |
| ! | AAGTTTGTTCTCGCTTGCTA+AGG | + | chr7.3:80694978-80694997 | None:intergenic | 40.0% |
| ! | AGCAAGCGAGAACAAACTTT+TGG | - | chr7.3:80694979-80694998 | MS.gene75990:CDS | 40.0% |
| ! | AGGGTATCAATTGATCTGCA+TGG | - | chr7.3:80694133-80694152 | MS.gene75990:intron | 40.0% |
| ! | GCTTTGGATATGGTTTCTGT+TGG | - | chr7.3:80695340-80695359 | MS.gene75990:CDS | 40.0% |
| !! | ACATTTAGCAGTGGTTTGCT+TGG | - | chr7.3:80694820-80694839 | MS.gene75990:CDS | 40.0% |
| !! | AGAAAAGGGTATCGTATGTG+GGG | - | chr7.3:80692405-80692424 | MS.gene75990:intron | 40.0% |
| !! | CGTATCAACTTTTTCTTCGC+TGG | - | chr7.3:80695764-80695783 | MS.gene75990:intron | 40.0% |
| !! | GAGAGAGCGTCTTAATAAGA+AGG | - | chr7.3:80693980-80693999 | MS.gene75990:intron | 40.0% |
| !! | GGTTCTGAGGTTAGAGATTT+GGG | - | chr7.3:80692097-80692116 | MS.gene75990:intron | 40.0% |
| !! | GTTGGAGGTGTTTCAGATAA+TGG | - | chr7.3:80691887-80691906 | MS.gene75990:CDS | 40.0% |
| ACCTCCAACATCAACATCAC+CGG | + | chr7.3:80691876-80691895 | None:intergenic | 45.0% | |
| ACTGTGAGGAGAATAGATGC+AGG | - | chr7.3:80696668-80696687 | MS.gene75990:CDS | 45.0% | |
| AGGAGGATAGCTGCAAGTAA+AGG | + | chr7.3:80694958-80694977 | None:intergenic | 45.0% | |
| AGGGGAATAGGAAGATTGTC+AGG | - | chr7.3:80694178-80694197 | MS.gene75990:intron | 45.0% | |
| ATAACAGAGACCGAACCGAA+GGG | - | chr7.3:80696268-80696287 | MS.gene75990:intron | 45.0% | |
| ATCCGAGCTTAGAGATAAGC+TGG | - | chr7.3:80693230-80693249 | MS.gene75990:intron | 45.0% | |
| CAGTGTCAAGTAGTGCTCTA+TGG | + | chr7.3:80696355-80696374 | None:intergenic | 45.0% | |
| CTGCTGCTATTGTATGGCTT+TGG | - | chr7.3:80695324-80695343 | MS.gene75990:CDS | 45.0% | |
| CTTTGAACGATTGGCAAGAG+AGG | - | chr7.3:80692176-80692195 | MS.gene75990:intron | 45.0% | |
| GACTTTGTCTTCTGAGCATG+AGG | - | chr7.3:80695054-80695073 | MS.gene75990:CDS | 45.0% | |
| GAGAATGTTAGGCTCGAATC+TGG | + | chr7.3:80694566-80694585 | None:intergenic | 45.0% | |
| GAGGAGTAGATTGGAATGCT+TGG | - | chr7.3:80693854-80693873 | MS.gene75990:intron | 45.0% | |
| GAGTAGATTGGAATGCTTGG+AGG | - | chr7.3:80693857-80693876 | MS.gene75990:intron | 45.0% | |
| GCTATGCTGCTGCTATTGTA+TGG | - | chr7.3:80695318-80695337 | MS.gene75990:CDS | 45.0% | |
| TATAACAGAGACCGAACCGA+AGG | - | chr7.3:80696267-80696286 | MS.gene75990:intron | 45.0% | |
| TGCCAGGTGGTCCTTAAAAA+TGG | - | chr7.3:80694521-80694540 | MS.gene75990:intron | 45.0% | |
| TGGCACCTGAACTGAATCAT+AGG | - | chr7.3:80696318-80696337 | MS.gene75990:intron | 45.0% | |
| TGTGTCAACAAGAGGGGAAT+AGG | - | chr7.3:80694166-80694185 | MS.gene75990:intron | 45.0% | |
| ! | AGAGAGGTTGGTTGAATCTG+AGG | - | chr7.3:80692192-80692211 | MS.gene75990:intron | 45.0% |
| ! | TTTGCTGACACAGTTGGCTT+TGG | - | chr7.3:80693956-80693975 | MS.gene75990:intron | 45.0% |
| ! | TTTGTTCTCGCTTGCTAAGG+AGG | + | chr7.3:80694975-80694994 | None:intergenic | 45.0% |
| !! | GATTTGTTATGTGGGGTGCT+GGG | - | chr7.3:80692076-80692095 | MS.gene75990:intron | 45.0% |
| !! | GGGTTCTGAGGTTAGAGATT+TGG | - | chr7.3:80692096-80692115 | MS.gene75990:intron | 45.0% |
| !! | GTCCATTTTTAAGGACCACC+TGG | + | chr7.3:80694526-80694545 | None:intergenic | 45.0% |
| !! | TGATTTGTTATGTGGGGTGC+TGG | - | chr7.3:80692075-80692094 | MS.gene75990:intron | 45.0% |
| !! | TGGTTTGCTTGGCTGATGAT+GGG | - | chr7.3:80694831-80694850 | MS.gene75990:CDS | 45.0% |
| !! | TTGGCTGATGATGGGATGTA+TGG | - | chr7.3:80694839-80694858 | MS.gene75990:CDS | 45.0% |
| !! | TTTTCGATGTCTTGTTCCCC+TGG | + | chr7.3:80696595-80696614 | None:intergenic | 45.0% |
| AATGCGCGTGAGATCCTGAA+GGG | - | chr7.3:80693138-80693157 | MS.gene75990:intron | 50.0% | |
| ACAGGGAATGTTGAAGACGG+TGG | - | chr7.3:80692865-80692884 | MS.gene75990:intron | 50.0% | |
| ACCGGTGATGTTGATGTTGG+AGG | - | chr7.3:80691872-80691891 | MS.gene75990:CDS | 50.0% | |
| ACTGACCACTTGAGTGGTGT+AGG | - | chr7.3:80694453-80694472 | MS.gene75990:intron | 50.0% | |
| AGACGGTGGAAATGTCCAAG+AGG | - | chr7.3:80692879-80692898 | MS.gene75990:intron | 50.0% | |
| AGTCATGCTCAGGTCTTGCA+AGG | - | chr7.3:80694591-80694610 | MS.gene75990:intron | 50.0% | |
| CACACTACTGACCACTTGAG+TGG | - | chr7.3:80694447-80694466 | MS.gene75990:intron | 50.0% | |
| CACTCAAGTGGTCAGTAGTG+TGG | + | chr7.3:80694449-80694468 | None:intergenic | 50.0% | |
| CTGTTCGCATTGTACAGGTG+AGG | + | chr7.3:80695958-80695977 | None:intergenic | 50.0% | |
| GAAAGCCTACACCACTCAAG+TGG | + | chr7.3:80694461-80694480 | None:intergenic | 50.0% | |
| GAACGATTGGCAAGAGAGGT+TGG | - | chr7.3:80692180-80692199 | MS.gene75990:intron | 50.0% | |
| GGAAGATTGTCAGGAGCCTA+TGG | - | chr7.3:80694187-80694206 | MS.gene75990:intron | 50.0% | |
| GTGAGGAGGCAGTCCAAAAT+CGG | + | chr7.3:80695941-80695960 | None:intergenic | 50.0% | |
| TACCAGATGTTGGGACTGTG+AGG | - | chr7.3:80696654-80696673 | MS.gene75990:CDS | 50.0% | |
| TGCACTGTCAGCTAGACTCT+CGG | + | chr7.3:80693772-80693791 | None:intergenic | 50.0% | |
| TTCGCATTGTACAGGTGAGG+AGG | + | chr7.3:80695955-80695974 | None:intergenic | 50.0% | |
| TTGCTTACAATCGAGACCGG+AGG | + | chr7.3:80696000-80696019 | None:intergenic | 50.0% | |
| TTGTCAGGAGCCTATGGTCT+AGG | - | chr7.3:80694193-80694212 | MS.gene75990:intron | 50.0% | |
| ! | GACTGATTTACAGCTGCAGC+AGG | - | chr7.3:80693641-80693660 | MS.gene75990:CDS | 50.0% |
| !! | GCTGATGATGGGATGTATGG+AGG | - | chr7.3:80694842-80694861 | MS.gene75990:CDS | 50.0% |
| !! | GTGGTTTGCTTGGCTGATGA+TGG | - | chr7.3:80694830-80694849 | MS.gene75990:CDS | 50.0% |
| CAATGCGCGTGAGATCCTGA+AGG | - | chr7.3:80693137-80693156 | MS.gene75990:intron | 55.0% | |
| CCTATGGTCTAGGCAACGTC+AGG | - | chr7.3:80694203-80694222 | MS.gene75990:intron | 55.0% | |
| CCTGACGTTGCCTAGACCAT+AGG | + | chr7.3:80694206-80694225 | None:intergenic | 55.0% | |
| CTCCTCACAGTCCCAACATC+TGG | + | chr7.3:80696659-80696678 | None:intergenic | 55.0% | |
| GAGTCTAGCTGACAGTGCAG+AGG | - | chr7.3:80693773-80693792 | MS.gene75990:intron | 55.0% | |
| GGAGGGATCACTGCAGAAAG+CGG | - | chr7.3:80693875-80693894 | MS.gene75990:intron | 55.0% | |
| TAGGTGAGGTGGGAATCGGT+AGG | + | chr7.3:80694628-80694647 | None:intergenic | 55.0% | |
| GAGGTGGGAATCGGTAGGCT+AGG | + | chr7.3:80694623-80694642 | None:intergenic | 60.0% | |
| GGAATCGGTAGGCTAGGCTC+GGG | + | chr7.3:80694617-80694636 | None:intergenic | 60.0% | |
| GGGAATCGGTAGGCTAGGCT+CGG | + | chr7.3:80694618-80694637 | None:intergenic | 60.0% | |
| GGGATCACTGCAGAAAGCGG+AGG | - | chr7.3:80693878-80693897 | MS.gene75990:intron | 60.0% | |
| !! | ATGTGGGGTGCTGGGTTCTG+AGG | - | chr7.3:80692084-80692103 | MS.gene75990:intron | 60.0% |
| CAGCAGGCAGTAGCGTCTGC+TGG | - | chr7.3:80693657-80693676 | MS.gene75990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 80691845 | 80696793 | 80691845 | ID=MS.gene75990 |
| chr7.3 | mRNA | 80691845 | 80696793 | 80691845 | ID=MS.gene75990.t1;Parent=MS.gene75990 |
| chr7.3 | exon | 80696349 | 80696793 | 80696349 | ID=MS.gene75990.t1.exon1;Parent=MS.gene75990.t1 |
| chr7.3 | CDS | 80696349 | 80696793 | 80696349 | ID=cds.MS.gene75990.t1;Parent=MS.gene75990.t1 |
| chr7.3 | exon | 80694637 | 80695769 | 80694637 | ID=MS.gene75990.t1.exon2;Parent=MS.gene75990.t1 |
| chr7.3 | CDS | 80694637 | 80695769 | 80694637 | ID=cds.MS.gene75990.t1;Parent=MS.gene75990.t1 |
| chr7.3 | exon | 80693563 | 80693670 | 80693563 | ID=MS.gene75990.t1.exon3;Parent=MS.gene75990.t1 |
| chr7.3 | CDS | 80693563 | 80693670 | 80693563 | ID=cds.MS.gene75990.t1;Parent=MS.gene75990.t1 |
| chr7.3 | exon | 80691845 | 80692042 | 80691845 | ID=MS.gene75990.t1.exon4;Parent=MS.gene75990.t1 |
| chr7.3 | CDS | 80691845 | 80692042 | 80691845 | ID=cds.MS.gene75990.t1;Parent=MS.gene75990.t1 |
| Gene Sequence |
| Protein sequence |
