Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44764.t1 | XP_003621609.1 | 83.7 | 625 | 101 | 1 | 1 | 625 | 1 | 624 | 2.20E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44764.t1 | Q8L7E5 | 30.0 | 661 | 409 | 9 | 10 | 616 | 37 | 697 | 2.8e-53 | 211.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44764.t1 | G7KS23 | 83.7 | 625 | 101 | 1 | 1 | 625 | 1 | 624 | 1.6e-211 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene44764 | 0.848369 | 6.40E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene44764 | 0.842006 | 3.37E-58 | -1.69E-46 |
| MS.gene049350 | MS.gene44764 | 0.820453 | 6.80E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene44764 | 0.839554 | 1.48E-57 | -1.69E-46 |
| MS.gene049887 | MS.gene44764 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene050084 | MS.gene44764 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene44764 | 0.836525 | 8.89E-57 | -1.69E-46 |
| MS.gene050551 | MS.gene44764 | 0.843405 | 1.43E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene44764 | 0.813662 | 2.29E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene44764 | 0.83999 | 1.14E-57 | -1.69E-46 |
| MS.gene050689 | MS.gene44764 | 0.846948 | 1.58E-59 | -1.69E-46 |
| MS.gene050807 | MS.gene44764 | 0.825534 | 4.45E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene44764 | 0.822164 | 2.74E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene44764 | 0.815962 | 7.06E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene44764 | 0.81712 | 3.89E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene44764 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene44764 | 0.806678 | 7.32E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene44764 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene44764 | 0.80969 | 1.67E-50 | -1.69E-46 |
| MS.gene051365 | MS.gene44764 | 0.806765 | 7.02E-50 | -1.69E-46 |
| MS.gene051381 | MS.gene44764 | 0.831808 | 1.35E-55 | -1.69E-46 |
| MS.gene051700 | MS.gene44764 | 0.801124 | 1.04E-48 | -1.69E-46 |
| MS.gene051720 | MS.gene44764 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene44764 | 0.823126 | 1.64E-53 | -1.69E-46 |
| MS.gene051902 | MS.gene44764 | 0.803254 | 3.81E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene44764 | 0.815382 | 9.51E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene44764 | 0.838211 | 3.29E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene44764 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene052397 | MS.gene44764 | 0.840348 | 9.18E-58 | -1.69E-46 |
| MS.gene052434 | MS.gene44764 | 0.816197 | 6.26E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene44764 | 0.803725 | 3.04E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene44764 | 0.822927 | 1.82E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene44764 | 0.834074 | 3.70E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene44764 | 0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene052776 | MS.gene44764 | 0.811486 | 6.84E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene44764 | 0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene44764 | 0.80982 | 1.57E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene44764 | 0.856467 | 3.15E-62 | -1.69E-46 |
| MS.gene053226 | MS.gene44764 | 0.826197 | 3.10E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene44764 | 0.807787 | 4.26E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene44764 | 0.85389 | 1.77E-61 | -1.69E-46 |
| MS.gene053931 | MS.gene44764 | 0.811267 | 7.62E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene44764 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene44764 | 0.839329 | 1.69E-57 | -1.69E-46 |
| MS.gene054823 | MS.gene44764 | 0.821523 | 3.86E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene44764 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene44764 | 0.812219 | 4.73E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene44764 | 0.820342 | 7.22E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene44764 | 0.821042 | 4.98E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene44764 | 0.807882 | 4.07E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene44764 | 0.816686 | 4.87E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene44764 | 0.835205 | 1.92E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene44764 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene44764 | 0.85292 | 3.36E-61 | -1.69E-46 |
| MS.gene056043 | MS.gene44764 | -0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene44764 | 0.837027 | 6.62E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene44764 | 0.878901 | 1.93E-69 | -1.69E-46 |
| MS.gene056308 | MS.gene44764 | 0.840408 | 8.85E-58 | -1.69E-46 |
| MS.gene056507 | MS.gene44764 | 0.807519 | 4.86E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene44764 | 0.811817 | 5.79E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene44764 | 0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene056831 | MS.gene44764 | 0.816133 | 6.47E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene44764 | 0.807895 | 4.04E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene44764 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene057446 | MS.gene44764 | 0.807351 | 5.27E-50 | -1.69E-46 |
| MS.gene05781 | MS.gene44764 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene057890 | MS.gene44764 | -0.800617 | 1.32E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene44764 | 0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene44764 | 0.825601 | 4.29E-54 | -1.69E-46 |
| MS.gene058055 | MS.gene44764 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene058292 | MS.gene44764 | 0.841643 | 4.19E-58 | -1.69E-46 |
| MS.gene058330 | MS.gene44764 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene44764 | 0.829799 | 4.20E-55 | -1.69E-46 |
| MS.gene058639 | MS.gene44764 | 0.832481 | 9.22E-56 | -1.69E-46 |
| MS.gene058646 | MS.gene44764 | 0.829766 | 4.28E-55 | -1.69E-46 |
| MS.gene058647 | MS.gene44764 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene44764 | 0.810383 | 1.18E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene44764 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene44764 | 0.825152 | 5.48E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene44764 | 0.803795 | 2.94E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene44764 | 0.833256 | 5.92E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene44764 | 0.827175 | 1.81E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene44764 | 0.822887 | 1.86E-53 | -1.69E-46 |
| MS.gene059937 | MS.gene44764 | 0.803982 | 2.69E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene44764 | 0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene44764 | 0.826963 | 2.03E-54 | -1.69E-46 |
| MS.gene060365 | MS.gene44764 | 0.801033 | 1.09E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene44764 | 0.806486 | 8.03E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene44764 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene44764 | 0.832188 | 1.09E-55 | -1.69E-46 |
| MS.gene060870 | MS.gene44764 | 0.802318 | 5.94E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene44764 | 0.811714 | 6.10E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene44764 | 0.815136 | 1.08E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene44764 | 0.814717 | 1.34E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene44764 | 0.854326 | 1.33E-61 | -1.69E-46 |
| MS.gene061100 | MS.gene44764 | 0.834566 | 2.78E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44764 | MS.gene024720 | PPI |
| MS.gene44764 | MS.gene050436 | PPI |
| MS.gene042816 | MS.gene44764 | PPI |
| MS.gene28843 | MS.gene44764 | PPI |
| MS.gene44764 | MS.gene062634 | PPI |
| MS.gene44764 | MS.gene27182 | PPI |
| MS.gene07091 | MS.gene44764 | PPI |
| MS.gene44764 | MS.gene00765 | PPI |
| MS.gene003010 | MS.gene44764 | PPI |
| MS.gene44764 | MS.gene37411 | PPI |
| MS.gene066515 | MS.gene44764 | PPI |
| MS.gene21929 | MS.gene44764 | PPI |
| MS.gene83287 | MS.gene44764 | PPI |
| MS.gene44764 | MS.gene015001 | PPI |
| MS.gene44764 | MS.gene32800 | PPI |
| MS.gene21699 | MS.gene44764 | PPI |
| MS.gene047484 | MS.gene44764 | PPI |
| MS.gene072669 | MS.gene44764 | PPI |
| MS.gene44764 | MS.gene22271 | PPI |
| MS.gene069778 | MS.gene44764 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44764.t1 | MTR_7g017690 | 96.160 | 625 | 23 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1186 |
| MS.gene44764.t1 | MTR_3g086660 | 51.107 | 587 | 233 | 9 | 7 | 548 | 17 | 594 | 9.26e-157 | 463 |
| MS.gene44764.t1 | MTR_2g075260 | 51.351 | 74 | 36 | 0 | 295 | 368 | 2 | 75 | 3.15e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44764.t1 | AT5G11390 | 38.438 | 666 | 346 | 13 | 10 | 616 | 37 | 697 | 2.36e-116 | 363 |
| MS.gene44764.t1 | AT1G68910 | 32.686 | 618 | 370 | 11 | 24 | 615 | 26 | 623 | 5.52e-79 | 263 |
| MS.gene44764.t1 | AT1G68910 | 34.397 | 564 | 327 | 10 | 24 | 564 | 26 | 569 | 1.12e-77 | 258 |
| MS.gene44764.t1 | AT1G68910 | 34.397 | 564 | 327 | 10 | 24 | 564 | 26 | 569 | 1.12e-77 | 258 |
Find 88 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTCATGCTGAGATTTC+TGG | 0.165736 | 7.4:-82535898 | MS.gene44764:CDS |
| CAAGCTTTCTCAGTTCAATT+TGG | 0.215388 | 7.4:-82534843 | MS.gene44764:CDS |
| GACTTTGTCTTCTTATAAAA+AGG | 0.245052 | 7.4:-82535773 | MS.gene44764:CDS |
| GGTTCTGAGGTTAGAGATTT+GGG | 0.265934 | 7.4:-82535934 | MS.gene44764:CDS |
| GGGTTCTGAGGTTAGAGATT+TGG | 0.291296 | 7.4:-82535935 | MS.gene44764:CDS |
| AGGAAGAAGCAATCGAAGTT+TGG | 0.300071 | 7.4:-82534937 | MS.gene44764:CDS |
| TGATTTGTTATGTGGGGTGC+TGG | 0.301024 | 7.4:-82535956 | MS.gene44764:CDS |
| ATGACAACTGCAAAGAATAT+TGG | 0.308994 | 7.4:-82534122 | MS.gene44764:CDS |
| ACAGCTGAAGCAGTTAATTT+AGG | 0.314252 | 7.4:-82534719 | MS.gene44764:CDS |
| TGATGAAGAAAACATCGATA+TGG | 0.316839 | 7.4:-82536004 | MS.gene44764:CDS |
| TATGATGAATTTGGAAACTT+TGG | 0.334665 | 7.4:-82536052 | MS.gene44764:CDS |
| GAGGATGCTTGAGAAATCTT+TGG | 0.339008 | 7.4:-82535062 | MS.gene44764:CDS |
| GTTGGAGGTGTTTCAGATAA+TGG | 0.340110 | 7.4:-82536144 | MS.gene44764:CDS |
| CTTCATTTGAAATTCCCTTC+AGG | 0.351204 | 7.4:+82534879 | None:intergenic |
| CAGCAGGCAGTAGCGTCTGC+TGG | 0.352082 | 7.4:-82534374 | MS.gene44764:CDS |
| TTTGAGTTTGATTTGTTATG+TGG | 0.355398 | 7.4:-82535964 | MS.gene44764:CDS |
| TTTGCTGACACAGTTGGCTT+TGG | 0.366680 | 7.4:-82534075 | MS.gene44764:CDS |
| AACTTTGGAAGGTGAATTAG+AGG | 0.372115 | 7.4:-82536037 | MS.gene44764:CDS |
| AGCAAGCGAGAACAAACTTT+TGG | 0.375212 | 7.4:-82533055 | MS.gene44764:CDS |
| TGTGACCTTTCTGTATTTCA+AGG | 0.376220 | 7.4:-82531393 | MS.gene44764:CDS |
| GTGTTACACAATTGAAGATA+TGG | 0.376803 | 7.4:-82534324 | MS.gene44764:CDS |
| TTGAGTTTGATTTGTTATGT+GGG | 0.386095 | 7.4:-82535963 | MS.gene44764:CDS |
| AAGTTTCTTGAGGAGTAGAT+TGG | 0.388441 | 7.4:-82534186 | MS.gene44764:CDS |
| TTTCTTTCAATTCTACGATA+AGG | 0.399271 | 7.4:+82534567 | None:intergenic |
| GAGATTCTTCTTTGAACGAT+TGG | 0.400387 | 7.4:-82535864 | MS.gene44764:CDS |
| GGAAGAAGCAATCGAAGTTT+GGG | 0.409580 | 7.4:-82534936 | MS.gene44764:CDS |
| AGATATGGAACATGTGATAA+AGG | 0.420057 | 7.4:-82534309 | MS.gene44764:CDS |
| TCGAAGTTTGATCATCCTCT+TGG | 0.428130 | 7.4:+82535137 | None:intergenic |
| CTTTCTCAGTTCAATTTGGT+TGG | 0.429559 | 7.4:-82534839 | MS.gene44764:CDS |
| CTCCTCACAGTCCCAACATC+TGG | 0.434733 | 7.4:+82531482 | None:intergenic |
| GGGAATTTCAAATGAAGTGT+TGG | 0.466188 | 7.4:-82534873 | MS.gene44764:CDS |
| TTCCAGCTTATCTCTAAGCT+CGG | 0.467512 | 7.4:+82534799 | None:intergenic |
| AGACTTTCACATTCACCAAC+TGG | 0.472930 | 7.4:+82534651 | None:intergenic |
| ACTGAAGCAAACATATAAGA+AGG | 0.478500 | 7.4:-82533025 | MS.gene44764:CDS |
| GACTTTGTCTTCTGAGTATG+AGG | 0.489364 | 7.4:-82532980 | MS.gene44764:intron |
| ATCCGAGCTTAGAGATAAGC+TGG | 0.490624 | 7.4:-82534801 | MS.gene44764:CDS |
| TTAACTCGTCTTCTAAAGAA+AGG | 0.496891 | 7.4:+82534969 | None:intergenic |
| GATTTGTTATGTGGGGTGCT+GGG | 0.499035 | 7.4:-82535955 | MS.gene44764:CDS |
| CAGATTCAATACCAGATGTT+GGG | 0.500850 | 7.4:-82531493 | MS.gene44764:CDS |
| GACTGATTTACAGCTGCAGC+AGG | 0.504375 | 7.4:-82534390 | MS.gene44764:CDS |
| ATGTGGGGTGCTGGGTTCTG+AGG | 0.507959 | 7.4:-82535947 | MS.gene44764:CDS |
| GAACGATTGGCAAGAGAGGT+TGG | 0.512420 | 7.4:-82535851 | MS.gene44764:CDS |
| GTTACTTGAAAGGCAGCTAA+AGG | 0.514392 | 7.4:-82534414 | MS.gene44764:CDS |
| GAGTAGATTGGAATGCTTGG+AGG | 0.519165 | 7.4:-82534174 | MS.gene44764:CDS |
| TCAGATTCAATACCAGATGT+TGG | 0.521726 | 7.4:-82531494 | MS.gene44764:CDS |
| AAGTTTGTTCTCGCTTGCTA+AGG | 0.523128 | 7.4:+82533059 | None:intergenic |
| TTTGTTCTCGCTTGCTAAGG+AGG | 0.527329 | 7.4:+82533062 | None:intergenic |
| GATAAAGGATCTTAAGTCAA+AGG | 0.527438 | 7.4:-82534294 | MS.gene44764:CDS |
| TAAAAGTTTGCTGACACAGT+TGG | 0.530211 | 7.4:-82534081 | MS.gene44764:CDS |
| CTTTGAACGATTGGCAAGAG+AGG | 0.530964 | 7.4:-82535855 | MS.gene44764:CDS |
| CAAAGTGTTGAAGATAATAC+CGG | 0.537217 | 7.4:-82536177 | MS.gene44764:CDS |
| GAGGAGTAGATTGGAATGCT+TGG | 0.538497 | 7.4:-82534177 | MS.gene44764:CDS |
| AGATAATGGAGAAGTTATTG+TGG | 0.538820 | 7.4:-82536130 | MS.gene44764:CDS |
| ACGAGGAAGTAAGTTTCTTG+AGG | 0.550455 | 7.4:-82534196 | MS.gene44764:CDS |
| CAAGTCCTTGAAATACAGAA+AGG | 0.560321 | 7.4:+82531388 | None:intergenic |
| AGTTTGGGAAAGATTGTTTG+AGG | 0.560777 | 7.4:-82534921 | MS.gene44764:CDS |
| ATGAATTTGGAAACTTTGGA+AGG | 0.568364 | 7.4:-82536048 | MS.gene44764:CDS |
| ATACTGTTGCTGATATTCAT+CGG | 0.568555 | 7.4:+82534625 | None:intergenic |
| TGAGTTTGATTTGTTATGTG+GGG | 0.573199 | 7.4:-82535962 | MS.gene44764:CDS |
| GAGAGAGCGTCTTAACAAGA+AGG | 0.577141 | 7.4:-82534051 | MS.gene44764:intron |
| ACCTCCAACATCAACATCAC+CGG | 0.581822 | 7.4:+82536158 | None:intergenic |
| ACCGGTGATGTTGATGTTGG+AGG | 0.584105 | 7.4:-82536159 | MS.gene44764:CDS |
| AGTAGATTGGAATGCTTGGA+GGG | 0.587529 | 7.4:-82534173 | MS.gene44764:CDS |
| TGCACTGTCAGCTAGACTCT+CGG | 0.590430 | 7.4:+82534262 | None:intergenic |
| AATACCGGTGATGTTGATGT+TGG | 0.597119 | 7.4:-82536162 | MS.gene44764:CDS |
| AGAGAGGTTGGTTGAATCCG+AGG | 0.600549 | 7.4:-82535839 | MS.gene44764:CDS |
| ACAGAAAGGTCACAGCTGAA+AGG | 0.601509 | 7.4:+82531402 | None:intergenic |
| GGAGGGATCACTGCAGAAAG+CGG | 0.612584 | 7.4:-82534156 | MS.gene44764:CDS |
| AGAGTGTAGAGTTACTTGAA+AGG | 0.618606 | 7.4:-82534424 | MS.gene44764:CDS |
| CTGAAGCAAACATATAAGAA+GGG | 0.621626 | 7.4:-82533024 | MS.gene44764:CDS |
| GTGTTCTCAAGTTAGAGACA+TGG | 0.624574 | 7.4:-82534594 | MS.gene44764:CDS |
| GAGTCTAGCTGACAGTGCAG+AGG | 0.624641 | 7.4:-82534258 | MS.gene44764:CDS |
| AATCTCGTAAAACTGCTCCT+CGG | 0.624682 | 7.4:+82535822 | None:intergenic |
| TTGAAGAAAAGCTAAATCTG+AGG | 0.628560 | 7.4:-82534994 | MS.gene44764:CDS |
| TACCAGATGTTGGGACTGTG+AGG | 0.630861 | 7.4:-82531484 | MS.gene44764:CDS |
| AGACGAGTTAATTCAAACAG+AGG | 0.633790 | 7.4:-82534957 | MS.gene44764:CDS |
| ACAAGAAACTGAATGCCAGT+TGG | 0.639494 | 7.4:-82534666 | MS.gene44764:CDS |
| ACTTTGGAAGGTGAATTAGA+GGG | 0.646483 | 7.4:-82536036 | MS.gene44764:CDS |
| ACTGTGAGGAGAATTGATGC+AGG | 0.649793 | 7.4:-82531470 | MS.gene44764:CDS |
| CAATGCGCGTGAGATCCTGA+AGG | 0.651405 | 7.4:-82534894 | MS.gene44764:CDS |
| AACTAATGAAGAACTCAACA+AGG | 0.662178 | 7.4:-82534483 | MS.gene44764:CDS |
| GGGATCACTGCAGAAAGCGG+AGG | 0.666512 | 7.4:-82534153 | MS.gene44764:CDS |
| ACAACAGGGAATGTTGAAGA+CGG | 0.671738 | 7.4:-82535169 | MS.gene44764:intron |
| AATGCGCGTGAGATCCTGAA+GGG | 0.678003 | 7.4:-82534893 | MS.gene44764:CDS |
| ATCTAATGCTGATTTAAACG+AGG | 0.690867 | 7.4:-82534213 | MS.gene44764:CDS |
| ACAGGGAATGTTGAAGACGG+TGG | 0.694865 | 7.4:-82535166 | MS.gene44764:intron |
| AGACGGTGGAAATGTCCAAG+AGG | 0.721239 | 7.4:-82535152 | MS.gene44764:CDS |
| AGAAAATCGAGCTAATGCTG+CGG | 0.733775 | 7.4:-82534531 | MS.gene44764:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTTATATAATAATAA+TGG | + | chr7.4:82533848-82533867 | None:intergenic | 10.0% |
| !! | TTATTAGAAATGAAAATTTA+GGG | + | chr7.4:82532326-82532345 | None:intergenic | 10.0% |
| !! | TTTACCATTATTATTATATA+AGG | - | chr7.4:82533841-82533860 | MS.gene44764:intron | 10.0% |
| !! | TTTATTAGAAATGAAAATTT+AGG | + | chr7.4:82532327-82532346 | None:intergenic | 10.0% |
| !!! | ATATTTTGAAATAATTGTTA+AGG | + | chr7.4:82534964-82534983 | None:intergenic | 10.0% |
| !!! | GTTAAATATTTTTCTTTTTA+TGG | - | chr7.4:82535074-82535093 | MS.gene44764:CDS | 10.0% |
| !!! | TTGTTTTAAAAAATAAGAAA+AGG | - | chr7.4:82532041-82532060 | MS.gene44764:intron | 10.0% |
| !! | AATAAATAAAGAACAATATC+AGG | + | chr7.4:82535847-82535866 | None:intergenic | 15.0% |
| !! | ATTCAAATACTGAAATATAT+AGG | + | chr7.4:82534166-82534185 | None:intergenic | 15.0% |
| !!! | ACATAAATGTTTAAAACAAA+TGG | + | chr7.4:82534391-82534410 | None:intergenic | 15.0% |
| !!! | CATAAATGTTTAAAACAAAT+GGG | + | chr7.4:82534390-82534409 | None:intergenic | 15.0% |
| !!! | TACTATTTCTATTAAATTGT+TGG | - | chr7.4:82535301-82535320 | MS.gene44764:intron | 15.0% |
| !! | AATAAATGTAAAACAGTACT+TGG | - | chr7.4:82535210-82535229 | MS.gene44764:intron | 20.0% |
| !! | AATAGCATTAAATACAATGA+AGG | + | chr7.4:82535485-82535504 | None:intergenic | 20.0% |
| !! | ATAAAAATATTCTCATTGGT+CGG | + | chr7.4:82532103-82532122 | None:intergenic | 20.0% |
| !! | ATATCACATGAAAATTAATG+TGG | + | chr7.4:82531954-82531973 | None:intergenic | 20.0% |
| !! | ATTAATCAACATAAATAACC+AGG | - | chr7.4:82533635-82533654 | MS.gene44764:intron | 20.0% |
| !! | GAAAAATATTTAACTAAGCT+AGG | + | chr7.4:82535068-82535087 | None:intergenic | 20.0% |
| !! | TAATTCATATACACAATCAA+TGG | + | chr7.4:82532301-82532320 | None:intergenic | 20.0% |
| !! | TCAGATAAAAATATTCTCAT+TGG | + | chr7.4:82532107-82532126 | None:intergenic | 20.0% |
| !! | TTAATCAACATAAATAACCA+GGG | - | chr7.4:82533636-82533655 | MS.gene44764:intron | 20.0% |
| !!! | AACAATCTTTTAGTTTTGAA+AGG | - | chr7.4:82531758-82531777 | MS.gene44764:intron | 20.0% |
| !!! | GAGTATTTTTATGATGAATT+TGG | - | chr7.4:82531492-82531511 | MS.gene44764:CDS | 20.0% |
| !!! | GTATGTTTAAGTTACATAAA+AGG | + | chr7.4:82533901-82533920 | None:intergenic | 20.0% |
| !!! | TGTTTGATCTATAGTTTTTT+TGG | - | chr7.4:82534900-82534919 | MS.gene44764:CDS | 20.0% |
| !!! | TTTTGAAATAATTGTTAAGG+AGG | + | chr7.4:82534961-82534980 | None:intergenic | 20.0% |
| ! | AAAAAAAAGGACAATTTGGA+AGG | + | chr7.4:82535818-82535837 | None:intergenic | 25.0% |
| ! | AAATCAAAGAGGAGAAAAAA+AGG | + | chr7.4:82534208-82534227 | None:intergenic | 25.0% |
| ! | AATACTGAAATATATAGGTG+AGG | + | chr7.4:82534161-82534180 | None:intergenic | 25.0% |
| ! | AGGAAAAAAAAAGGACAATT+TGG | + | chr7.4:82535822-82535841 | None:intergenic | 25.0% |
| ! | AGTTAGAACATTAACATTGA+TGG | + | chr7.4:82532246-82532265 | None:intergenic | 25.0% |
| ! | AGTTCAGTGTAAAAAATTGA+CGG | - | chr7.4:82533046-82533065 | MS.gene44764:CDS | 25.0% |
| ! | ATAAAGAACAATATCAGGAA+AGG | + | chr7.4:82535842-82535861 | None:intergenic | 25.0% |
| ! | ATTATGGTATTATCTTCTGT+TGG | - | chr7.4:82535707-82535726 | MS.gene44764:intron | 25.0% |
| ! | GAAAAATAGAGACGTTAATT+TGG | - | chr7.4:82532794-82532813 | MS.gene44764:intron | 25.0% |
| ! | GAAAATCCAACACATAAAAA+AGG | + | chr7.4:82532360-82532379 | None:intergenic | 25.0% |
| ! | GACTTTGTCTTCTTATAAAA+AGG | - | chr7.4:82531780-82531799 | MS.gene44764:intron | 25.0% |
| ! | GTAAAACATTGTCTTGTATT+AGG | - | chr7.4:82534840-82534859 | MS.gene44764:CDS | 25.0% |
| ! | TAAAATCTCATACTATAGTC+AGG | + | chr7.4:82534422-82534441 | None:intergenic | 25.0% |
| ! | TATCAGGAAAGGAAAAAAAA+AGG | + | chr7.4:82535831-82535850 | None:intergenic | 25.0% |
| ! | TATGATGAATTTGGAAACTT+TGG | - | chr7.4:82531501-82531520 | MS.gene44764:CDS | 25.0% |
| ! | TATTCAAGAGAGATATTATC+AGG | + | chr7.4:82533585-82533604 | None:intergenic | 25.0% |
| ! | TCTTATAAAAAGGAAGAGAA+TGG | - | chr7.4:82531790-82531809 | MS.gene44764:intron | 25.0% |
| ! | TTAACAACTGTAGTTATGTA+TGG | - | chr7.4:82534248-82534267 | MS.gene44764:CDS | 25.0% |
| ! | TTCATTTAGTTGTTGGAAAA+GGG | - | chr7.4:82531913-82531932 | MS.gene44764:intron | 25.0% |
| ! | TTTCAATGTACTAACATTCA+TGG | - | chr7.4:82535028-82535047 | MS.gene44764:CDS | 25.0% |
| ! | TTTCATTTAGTTGTTGGAAA+AGG | - | chr7.4:82531912-82531931 | MS.gene44764:intron | 25.0% |
| ! | TTTCTTTCAATTCTACGATA+AGG | + | chr7.4:82532989-82533008 | None:intergenic | 25.0% |
| !! | AGAAAATAAAAAGCATAGTC+TGG | + | chr7.4:82533757-82533776 | None:intergenic | 25.0% |
| !! | ATTTGATTCTAAAAAAGTGC+TGG | + | chr7.4:82533800-82533819 | None:intergenic | 25.0% |
| !! | GTTTAAGTTACATAAAAGGT+TGG | + | chr7.4:82533897-82533916 | None:intergenic | 25.0% |
| !!! | AAAAGTTGATACGACATATA+AGG | + | chr7.4:82535149-82535168 | None:intergenic | 25.0% |
| !!! | CAGCAAACTTTTAAAAACTT+TGG | + | chr7.4:82533465-82533484 | None:intergenic | 25.0% |
| !!! | CATGAAACATTCATGTTTTT+TGG | - | chr7.4:82535433-82535452 | MS.gene44764:intron | 25.0% |
| !!! | CTTCAATCAAGTTGATTTAT+AGG | + | chr7.4:82534306-82534325 | None:intergenic | 25.0% |
| !!! | GATATGGATTGTGTTTTAAA+GGG | - | chr7.4:82531565-82531584 | MS.gene44764:intron | 25.0% |
| !!! | TTGAGTTTGATTTGTTATGT+GGG | - | chr7.4:82531590-82531609 | MS.gene44764:intron | 25.0% |
| !!! | TTTGAGTTTGATTTGTTATG+TGG | - | chr7.4:82531589-82531608 | MS.gene44764:intron | 25.0% |
| AAAAAGACTAACAAGCTCAT+AGG | + | chr7.4:82533938-82533957 | None:intergenic | 30.0% | |
| AACAGAAATATACTGCCAAT+AGG | + | chr7.4:82535010-82535029 | None:intergenic | 30.0% | |
| AACTAATGAAGAACTCAACA+AGG | - | chr7.4:82533070-82533089 | MS.gene44764:intron | 30.0% | |
| AACTACAGTTGTTAAACTCA+AGG | + | chr7.4:82534243-82534262 | None:intergenic | 30.0% | |
| AAGGACAAAAATTTCAACCA+AGG | + | chr7.4:82534458-82534477 | None:intergenic | 30.0% | |
| ACAATTAAAACGAGAAGAGT+CGG | - | chr7.4:82535537-82535556 | MS.gene44764:intron | 30.0% | |
| ACTGAAGCAAACATATAAGA+AGG | - | chr7.4:82534528-82534547 | MS.gene44764:CDS | 30.0% | |
| AGATATGGAACATGTGATAA+AGG | - | chr7.4:82533244-82533263 | MS.gene44764:intron | 30.0% | |
| AGCATCATTGAAGTGTATTA+TGG | + | chr7.4:82535512-82535531 | None:intergenic | 30.0% | |
| ATAATACACTTCAATGATGC+TGG | - | chr7.4:82535511-82535530 | MS.gene44764:intron | 30.0% | |
| ATACTGTTGCTGATATTCAT+CGG | + | chr7.4:82532931-82532950 | None:intergenic | 30.0% | |
| ATGAACTAGTGGGAAAAAAA+AGG | + | chr7.4:82534806-82534825 | None:intergenic | 30.0% | |
| ATGAATTTGGAAACTTTGGA+AGG | - | chr7.4:82531505-82531524 | MS.gene44764:CDS | 30.0% | |
| ATGACAACTGCAAAGAATAT+TGG | - | chr7.4:82533431-82533450 | MS.gene44764:intron | 30.0% | |
| CAACAACTAAATGAAAAGAC+AGG | + | chr7.4:82531908-82531927 | None:intergenic | 30.0% | |
| CAACTTGATTGAAGATTCAT+TGG | - | chr7.4:82534312-82534331 | MS.gene44764:CDS | 30.0% | |
| CGGCAATAAATCTCATAAAA+GGG | - | chr7.4:82535557-82535576 | MS.gene44764:intron | 30.0% | |
| CTGAAGCAAACATATAAGAA+GGG | - | chr7.4:82534529-82534548 | MS.gene44764:CDS | 30.0% | |
| CTTAAAAATGGACCTATAAC+AGG | - | chr7.4:82534052-82534071 | MS.gene44764:CDS | 30.0% | |
| GAAACAAGATTTCAAAAGCT+TGG | + | chr7.4:82533534-82533553 | None:intergenic | 30.0% | |
| GAGTTCCATTAATGCAAAAT+AGG | + | chr7.4:82532014-82532033 | None:intergenic | 30.0% | |
| GATAAAGGATCTTAAGTCAA+AGG | - | chr7.4:82533259-82533278 | MS.gene44764:intron | 30.0% | |
| GTAATAACAGCAGAGAAATA+TGG | - | chr7.4:82535947-82535966 | MS.gene44764:CDS | 30.0% | |
| GTAATTATGCAGTCCAAAAT+CGG | + | chr7.4:82535329-82535348 | None:intergenic | 30.0% | |
| GTGTTACACAATTGAAGATA+TGG | - | chr7.4:82533229-82533248 | MS.gene44764:intron | 30.0% | |
| TAAACAACTTTCAAAATGCC+AGG | - | chr7.4:82534024-82534043 | MS.gene44764:intron | 30.0% | |
| TATGAAGTCACACATATGAT+TGG | + | chr7.4:82532197-82532216 | None:intergenic | 30.0% | |
| TCGGCAATAAATCTCATAAA+AGG | - | chr7.4:82535556-82535575 | MS.gene44764:intron | 30.0% | |
| TGAAAGTGGAAAAATCAAAG+AGG | + | chr7.4:82534219-82534238 | None:intergenic | 30.0% | |
| TGATGAAGAAAACATCGATA+TGG | - | chr7.4:82531549-82531568 | MS.gene44764:intron | 30.0% | |
| TTGAAGAAAAGCTAAATCTG+AGG | - | chr7.4:82532559-82532578 | MS.gene44764:intron | 30.0% | |
| TTTATATACCTGTTCATCCT+TGG | - | chr7.4:82534438-82534457 | MS.gene44764:CDS | 30.0% | |
| ! | AAACGCCTATTTTGCATTAA+TGG | - | chr7.4:82532006-82532025 | MS.gene44764:intron | 30.0% |
| ! | AGCAACATAGAAACATTTTG+AGG | - | chr7.4:82532472-82532491 | MS.gene44764:intron | 30.0% |
| ! | ATAATTTGTGTCAACAAGAG+GGG | - | chr7.4:82533682-82533701 | MS.gene44764:intron | 30.0% |
| ! | ATGACTACTTTGAGAATGTT+AGG | + | chr7.4:82534096-82534115 | None:intergenic | 30.0% |
| ! | CTGTCTTTTCATTTAGTTGT+TGG | - | chr7.4:82531906-82531925 | MS.gene44764:intron | 30.0% |
| ! | GATAATTTGTGTCAACAAGA+GGG | - | chr7.4:82533681-82533700 | MS.gene44764:intron | 30.0% |
| ! | GGACTGCATAATTACTATTT+TGG | - | chr7.4:82535334-82535353 | MS.gene44764:intron | 30.0% |
| ! | TGATAATTTGTGTCAACAAG+AGG | - | chr7.4:82533680-82533699 | MS.gene44764:intron | 30.0% |
| ! | TTAACTCGTCTTCTAAAGAA+AGG | + | chr7.4:82532587-82532606 | None:intergenic | 30.0% |
| ! | TTGGATTTTCAATGACAACA+GGG | - | chr7.4:82532370-82532389 | MS.gene44764:intron | 30.0% |
| !! | AGATAATGGAGAAGTTATTG+TGG | - | chr7.4:82531423-82531442 | MS.gene44764:CDS | 30.0% |
| !! | ATCTAATGCTGATTTAAACG+AGG | - | chr7.4:82533340-82533359 | MS.gene44764:intron | 30.0% |
| !! | CAAAGTGTTGAAGATAATAC+CGG | - | chr7.4:82531376-82531395 | MS.gene44764:CDS | 30.0% |
| !! | CGATATGGATTGTGTTTTAA+AGG | - | chr7.4:82531564-82531583 | MS.gene44764:intron | 30.0% |
| !! | CTGGTAAAGTGTTATTTGTT+AGG | - | chr7.4:82535175-82535194 | MS.gene44764:intron | 30.0% |
| !! | CTGTTATAGGTCCATTTTTA+AGG | + | chr7.4:82534054-82534073 | None:intergenic | 30.0% |
| !! | TAGAGATTTGGGTTTGTTTT+TGG | - | chr7.4:82531630-82531649 | MS.gene44764:intron | 30.0% |
| !! | TGAGTTTGATTTGTTATGTG+GGG | - | chr7.4:82531591-82531610 | MS.gene44764:intron | 30.0% |
| !! | TGCACATATTATTTCTAACC+AGG | + | chr7.4:82535253-82535272 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTCTCTAACTAT+TGG | - | chr7.4:82534917-82534936 | MS.gene44764:CDS | 30.0% |
| !!! | TTTTTTTTCCCACTAGTTCA+TGG | - | chr7.4:82534805-82534824 | MS.gene44764:CDS | 30.0% |
| AAACAATTTGAACACGCTAG+TGG | + | chr7.4:82534885-82534904 | None:intergenic | 35.0% | |
| AAGTTTCTTGAGGAGTAGAT+TGG | - | chr7.4:82533367-82533386 | MS.gene44764:intron | 35.0% | |
| AATTTCAACCAAGGATGAAC+AGG | + | chr7.4:82534449-82534468 | None:intergenic | 35.0% | |
| ACAGCTGAAGCAGTTAATTT+AGG | - | chr7.4:82532834-82532853 | MS.gene44764:intron | 35.0% | |
| ACCATAATACTTACTCCCTT+CGG | + | chr7.4:82535695-82535714 | None:intergenic | 35.0% | |
| ACTGAAATATATAGGTGAGG+TGG | + | chr7.4:82534158-82534177 | None:intergenic | 35.0% | |
| AGACGAGTTAATTCAAACAG+AGG | - | chr7.4:82532596-82532615 | MS.gene44764:intron | 35.0% | |
| AGAGTGTAGAGTTACTTGAA+AGG | - | chr7.4:82533129-82533148 | MS.gene44764:intron | 35.0% | |
| AGTTTGGGAAAGATTGTTTG+AGG | - | chr7.4:82532632-82532651 | MS.gene44764:intron | 35.0% | |
| ATGGACCTATAACAGGTAAT+AGG | - | chr7.4:82534059-82534078 | MS.gene44764:CDS | 35.0% | |
| ATTGGATGAACATTTACCAG+TGG | - | chr7.4:82534330-82534349 | MS.gene44764:CDS | 35.0% | |
| CAAGCTTTCTCAGTTCAATT+TGG | - | chr7.4:82532710-82532729 | MS.gene44764:intron | 35.0% | |
| CAAGTCCTTGAAATACAGAA+AGG | + | chr7.4:82536168-82536187 | None:intergenic | 35.0% | |
| CAGATTCAATACCAGATGTT+GGG | - | chr7.4:82536060-82536079 | MS.gene44764:CDS | 35.0% | |
| CATATGTGTGACTTCATAAG+TGG | - | chr7.4:82532199-82532218 | MS.gene44764:intron | 35.0% | |
| CTGAAATATATAGGTGAGGT+GGG | + | chr7.4:82534157-82534176 | None:intergenic | 35.0% | |
| CTGATACACAAGAATCTCTT+TGG | - | chr7.4:82534641-82534660 | MS.gene44764:CDS | 35.0% | |
| CTTTCTCAGTTCAATTTGGT+TGG | - | chr7.4:82532714-82532733 | MS.gene44764:intron | 35.0% | |
| GAGATATTATCAGGTCTCTA+TGG | + | chr7.4:82533576-82533595 | None:intergenic | 35.0% | |
| GAGATTCTTCTTTGAACGAT+TGG | - | chr7.4:82531689-82531708 | MS.gene44764:intron | 35.0% | |
| GGGAATTTCAAATGAAGTGT+TGG | - | chr7.4:82532680-82532699 | MS.gene44764:intron | 35.0% | |
| GTAAACACAATTACTTCCTC+CGG | - | chr7.4:82535390-82535409 | MS.gene44764:intron | 35.0% | |
| GTTAAGGAGGATTGATAAGA+AGG | + | chr7.4:82534948-82534967 | None:intergenic | 35.0% | |
| TATACTGCCAATAGGATGTT+TGG | + | chr7.4:82535002-82535021 | None:intergenic | 35.0% | |
| TCAGATTCAATACCAGATGT+TGG | - | chr7.4:82536059-82536078 | MS.gene44764:CDS | 35.0% | |
| TCTATGGCAGTATAATGTAG+TGG | + | chr7.4:82533560-82533579 | None:intergenic | 35.0% | |
| TGTGACCTTTCTGTATTTCA+AGG | - | chr7.4:82536160-82536179 | MS.gene44764:CDS | 35.0% | |
| TTCCCCTGGAAAAGAAAAAT+AGG | + | chr7.4:82535996-82536015 | None:intergenic | 35.0% | |
| ! | AACTTTGGAAGGTGAATTAG+AGG | - | chr7.4:82531516-82531535 | MS.gene44764:CDS | 35.0% |
| ! | ACTTTGGAAGGTGAATTAGA+GGG | - | chr7.4:82531517-82531536 | MS.gene44764:CDS | 35.0% |
| ! | AGAGTCTAGATTTTTCACAC+TGG | + | chr7.4:82532161-82532180 | None:intergenic | 35.0% |
| ! | ATAAAAAGCATAGTCTGGCT+TGG | + | chr7.4:82533752-82533771 | None:intergenic | 35.0% |
| ! | CTTCATTTGAAATTCCCTTC+AGG | + | chr7.4:82532677-82532696 | None:intergenic | 35.0% |
| ! | GTTGGATTTTCAATGACAAC+AGG | - | chr7.4:82532369-82532388 | MS.gene44764:intron | 35.0% |
| ! | TAAAAAGCATAGTCTGGCTT+GGG | + | chr7.4:82533751-82533770 | None:intergenic | 35.0% |
| ! | TTTTTGCTTACAATCGAGAC+CGG | + | chr7.4:82535412-82535431 | None:intergenic | 35.0% |
| !! | CTCCTATTTTTCTTTTCCAG+GGG | - | chr7.4:82535991-82536010 | MS.gene44764:CDS | 35.0% |
| !! | CTGACTCTTTTAAAAGACTG+TGG | - | chr7.4:82533095-82533114 | MS.gene44764:intron | 35.0% |
| !! | GCTCCTATTTTTCTTTTCCA+GGG | - | chr7.4:82535990-82536009 | MS.gene44764:CDS | 35.0% |
| !! | TAAAAGTTTGCTGACACAGT+TGG | - | chr7.4:82533472-82533491 | MS.gene44764:intron | 35.0% |
| !! | TGCTCCTATTTTTCTTTTCC+AGG | - | chr7.4:82535989-82536008 | MS.gene44764:CDS | 35.0% |
| !!! | TAAATTGTTGGCTCCGATTT+TGG | - | chr7.4:82535313-82535332 | MS.gene44764:intron | 35.0% |
| !!! | TGCTGTCCTTTTTTATGTGT+TGG | - | chr7.4:82532351-82532370 | MS.gene44764:intron | 35.0% |
| !!! | TGTGGATTTTGAAATGAGTG+TGG | - | chr7.4:82531441-82531460 | MS.gene44764:CDS | 35.0% |
| AACATTCATGGCATGCTTCT+AGG | - | chr7.4:82535040-82535059 | MS.gene44764:CDS | 40.0% | |
| AATACCGGTGATGTTGATGT+TGG | - | chr7.4:82531391-82531410 | MS.gene44764:CDS | 40.0% | |
| AATACTTACTCCCTTCGGTT+CGG | + | chr7.4:82535690-82535709 | None:intergenic | 40.0% | |
| AATCTCGTAAAACTGCTCCT+CGG | + | chr7.4:82531734-82531753 | None:intergenic | 40.0% | |
| ACAACAGGGAATGTTGAAGA+CGG | - | chr7.4:82532384-82532403 | MS.gene44764:intron | 40.0% | |
| ACAACTTTCAAAATGCCAGG+CGG | - | chr7.4:82534027-82534046 | MS.gene44764:intron | 40.0% | |
| ACAAGAAACTGAATGCCAGT+TGG | - | chr7.4:82532887-82532906 | MS.gene44764:intron | 40.0% | |
| ACACTTCATGCTGAGATTTC+TGG | - | chr7.4:82531655-82531674 | MS.gene44764:intron | 40.0% | |
| ACCGAAGGGAGTAAGTATTA+TGG | - | chr7.4:82535691-82535710 | MS.gene44764:intron | 40.0% | |
| ACGAGGAAGTAAGTTTCTTG+AGG | - | chr7.4:82533357-82533376 | MS.gene44764:intron | 40.0% | |
| ACTCTCCTATGATTCAGTTC+AGG | + | chr7.4:82535735-82535754 | None:intergenic | 40.0% | |
| AGAAAATCGAGCTAATGCTG+CGG | - | chr7.4:82533022-82533041 | MS.gene44764:CDS | 40.0% | |
| AGACTTTCACATTCACCAAC+TGG | + | chr7.4:82532905-82532924 | None:intergenic | 40.0% | |
| AGCTACTACCAGACAAAAAC+AGG | + | chr7.4:82534769-82534788 | None:intergenic | 40.0% | |
| AGGAAGAAGCAATCGAAGTT+TGG | - | chr7.4:82532616-82532635 | MS.gene44764:intron | 40.0% | |
| AGTAGATTGGAATGCTTGGA+GGG | - | chr7.4:82533380-82533399 | MS.gene44764:intron | 40.0% | |
| ATAGGATGTTTGGACATGAG+TGG | + | chr7.4:82534992-82535011 | None:intergenic | 40.0% | |
| ATCACCAATCCATGAACTAG+TGG | + | chr7.4:82534817-82534836 | None:intergenic | 40.0% | |
| ATGCAGATCAATTGATACCC+TGG | + | chr7.4:82533656-82533675 | None:intergenic | 40.0% | |
| CTCATGTCCAAACATCCTAT+TGG | - | chr7.4:82534992-82535011 | MS.gene44764:CDS | 40.0% | |
| GACTTTGTCTTCTGAGTATG+AGG | - | chr7.4:82534573-82534592 | MS.gene44764:CDS | 40.0% | |
| GAGGATGCTTGAGAAATCTT+TGG | - | chr7.4:82532491-82532510 | MS.gene44764:intron | 40.0% | |
| GGAAGAAGCAATCGAAGTTT+GGG | - | chr7.4:82532617-82532636 | MS.gene44764:intron | 40.0% | |
| GTGTTCTCAAGTTAGAGACA+TGG | - | chr7.4:82532959-82532978 | MS.gene44764:intron | 40.0% | |
| GTTAAACTCAAGGCTGAAAG+TGG | + | chr7.4:82534233-82534252 | None:intergenic | 40.0% | |
| GTTACTTGAAAGGCAGCTAA+AGG | - | chr7.4:82533139-82533158 | MS.gene44764:intron | 40.0% | |
| TATATAGGTGAGGTGGGAAT+CGG | + | chr7.4:82534151-82534170 | None:intergenic | 40.0% | |
| TCACCAATCCATGAACTAGT+GGG | + | chr7.4:82534816-82534835 | None:intergenic | 40.0% | |
| TCCAACAGAAACCATATCCA+AGG | + | chr7.4:82534736-82534755 | None:intergenic | 40.0% | |
| TCGAAGTTTGATCATCCTCT+TGG | + | chr7.4:82532419-82532438 | None:intergenic | 40.0% | |
| TCTGGCCTATTACCTGTTAT+AGG | + | chr7.4:82534067-82534086 | None:intergenic | 40.0% | |
| TGTGCATAAAGCATGCTATG+TGG | - | chr7.4:82535267-82535286 | MS.gene44764:intron | 40.0% | |
| TTCCAGCTTATCTCTAAGCT+CGG | + | chr7.4:82532757-82532776 | None:intergenic | 40.0% | |
| TTCTCAAAGTAGTCATGCTC+AGG | - | chr7.4:82534100-82534119 | MS.gene44764:CDS | 40.0% | |
| TTTCCCACTAGTTCATGGAT+TGG | - | chr7.4:82534810-82534829 | MS.gene44764:CDS | 40.0% | |
| ! | AAGTTTGTTCTCGCTTGCTA+AGG | + | chr7.4:82534497-82534516 | None:intergenic | 40.0% |
| ! | AGCAAGCGAGAACAAACTTT+TGG | - | chr7.4:82534498-82534517 | MS.gene44764:CDS | 40.0% |
| ! | AGGGTATCAATTGATCTGCA+TGG | - | chr7.4:82533655-82533674 | MS.gene44764:intron | 40.0% |
| ! | CTATTGTATGGCCTTGGATA+TGG | - | chr7.4:82534722-82534741 | MS.gene44764:CDS | 40.0% |
| ! | TCTTTTTATGGGAGTCTTGC+TGG | - | chr7.4:82535086-82535105 | MS.gene44764:CDS | 40.0% |
| !! | ACATTTACCAGTGGTTTGCT+TGG | - | chr7.4:82534339-82534358 | MS.gene44764:CDS | 40.0% |
| !! | CGTATCAACTTTTTCTTCGC+TGG | - | chr7.4:82535156-82535175 | MS.gene44764:CDS | 40.0% |
| !! | GGTTCTGAGGTTAGAGATTT+GGG | - | chr7.4:82531619-82531638 | MS.gene44764:intron | 40.0% |
| !! | GTTGGAGGTGTTTCAGATAA+TGG | - | chr7.4:82531409-82531428 | MS.gene44764:CDS | 40.0% |
| !! | TGGAAAAGGGTATCGTATGT+GGG | - | chr7.4:82531926-82531945 | MS.gene44764:intron | 40.0% |
| !! | TTGGAAAAGGGTATCGTATG+TGG | - | chr7.4:82531925-82531944 | MS.gene44764:intron | 40.0% |
| !!! | AACTTCTGCCTGTTTTTGTC+TGG | - | chr7.4:82534758-82534777 | MS.gene44764:CDS | 40.0% |
| ACAGAAAGGTCACAGCTGAA+AGG | + | chr7.4:82536154-82536173 | None:intergenic | 45.0% | |
| ACCTCCAACATCAACATCAC+CGG | + | chr7.4:82531398-82531417 | None:intergenic | 45.0% | |
| ACTATCTGTCCGCATTGTAC+AGG | + | chr7.4:82535372-82535391 | None:intergenic | 45.0% | |
| ACTGTGAGGAGAATTGATGC+AGG | - | chr7.4:82536083-82536102 | MS.gene44764:CDS | 45.0% | |
| AGGAGGATAGCTGCAAGTAA+AGG | + | chr7.4:82534477-82534496 | None:intergenic | 45.0% | |
| AGGGGAATAGGAAGATTGTC+AGG | - | chr7.4:82533700-82533719 | MS.gene44764:intron | 45.0% | |
| AGTACTTGGCATAGAGTGCA+TGG | - | chr7.4:82535224-82535243 | MS.gene44764:intron | 45.0% | |
| ATAACAGAGACCGAACCGAA+GGG | - | chr7.4:82535677-82535696 | MS.gene44764:intron | 45.0% | |
| ATCCGAGCTTAGAGATAAGC+TGG | - | chr7.4:82532752-82532771 | MS.gene44764:intron | 45.0% | |
| CTTTGAACGATTGGCAAGAG+AGG | - | chr7.4:82531698-82531717 | MS.gene44764:intron | 45.0% | |
| GAGAATGTTAGGCTCGAATC+TGG | + | chr7.4:82534085-82534104 | None:intergenic | 45.0% | |
| GAGGAGTAGATTGGAATGCT+TGG | - | chr7.4:82533376-82533395 | MS.gene44764:intron | 45.0% | |
| GAGTAGATTGGAATGCTTGG+AGG | - | chr7.4:82533379-82533398 | MS.gene44764:intron | 45.0% | |
| GCCTTGGATATGGTTTCTGT+TGG | - | chr7.4:82534732-82534751 | MS.gene44764:CDS | 45.0% | |
| GCTATGCTGCTGCTATTGTA+TGG | - | chr7.4:82534710-82534729 | MS.gene44764:CDS | 45.0% | |
| TATAACAGAGACCGAACCGA+AGG | - | chr7.4:82535676-82535695 | MS.gene44764:intron | 45.0% | |
| TGGCACCTGAACTGAATCAT+AGG | - | chr7.4:82535727-82535746 | MS.gene44764:intron | 45.0% | |
| TGTGTCAACAAGAGGGGAAT+AGG | - | chr7.4:82533688-82533707 | MS.gene44764:intron | 45.0% | |
| ! | TTTGCTGACACAGTTGGCTT+TGG | - | chr7.4:82533478-82533497 | MS.gene44764:intron | 45.0% |
| ! | TTTGTTCTCGCTTGCTAAGG+AGG | + | chr7.4:82534494-82534513 | None:intergenic | 45.0% |
| !! | GAGAGAGCGTCTTAACAAGA+AGG | - | chr7.4:82533502-82533521 | MS.gene44764:intron | 45.0% |
| !! | GATTTGTTATGTGGGGTGCT+GGG | - | chr7.4:82531598-82531617 | MS.gene44764:intron | 45.0% |
| !! | GGAAAAGGGTATCGTATGTG+GGG | - | chr7.4:82531927-82531946 | MS.gene44764:intron | 45.0% |
| !! | GGGTTCTGAGGTTAGAGATT+TGG | - | chr7.4:82531618-82531637 | MS.gene44764:intron | 45.0% |
| !! | TGATTTGTTATGTGGGGTGC+TGG | - | chr7.4:82531597-82531616 | MS.gene44764:intron | 45.0% |
| !! | TGGTTTGCTTGGCTGATGAT+GGG | - | chr7.4:82534350-82534369 | MS.gene44764:CDS | 45.0% |
| !! | TTGGCTGATGATGGGATGTA+TGG | - | chr7.4:82534358-82534377 | MS.gene44764:CDS | 45.0% |
| !! | TTTTCGATGTCTTGTTCCCC+TGG | + | chr7.4:82536010-82536029 | None:intergenic | 45.0% |
| !!! | TTAAATATTTTTCTTTTTAT+GGG | - | chr7.4:82535075-82535094 | MS.gene44764:CDS | 5.0% |
| AATGCGCGTGAGATCCTGAA+GGG | - | chr7.4:82532660-82532679 | MS.gene44764:intron | 50.0% | |
| ACAGGGAATGTTGAAGACGG+TGG | - | chr7.4:82532387-82532406 | MS.gene44764:intron | 50.0% | |
| ACCGGTGATGTTGATGTTGG+AGG | - | chr7.4:82531394-82531413 | MS.gene44764:CDS | 50.0% | |
| ACTGACCACTTGAGTGGTGT+AGG | - | chr7.4:82533972-82533991 | MS.gene44764:intron | 50.0% | |
| AGACGGTGGAAATGTCCAAG+AGG | - | chr7.4:82532401-82532420 | MS.gene44764:intron | 50.0% | |
| AGTCATGCTCAGGTCTTGCA+AGG | - | chr7.4:82534110-82534129 | MS.gene44764:CDS | 50.0% | |
| CACACTACTGACCACTTGAG+TGG | - | chr7.4:82533966-82533985 | MS.gene44764:intron | 50.0% | |
| CACTCAAGTGGTCAGTAGTG+TGG | + | chr7.4:82533968-82533987 | None:intergenic | 50.0% | |
| CTGCTGCTATTGTATGGCCT+TGG | - | chr7.4:82534716-82534735 | MS.gene44764:CDS | 50.0% | |
| GAAAGCCTACACCACTCAAG+TGG | + | chr7.4:82533980-82533999 | None:intergenic | 50.0% | |
| GAACGATTGGCAAGAGAGGT+TGG | - | chr7.4:82531702-82531721 | MS.gene44764:intron | 50.0% | |
| GCATAGAGTGCATGGTTTCC+TGG | - | chr7.4:82535232-82535251 | MS.gene44764:intron | 50.0% | |
| GGAAGATTGTCAGGAGCCTA+TGG | - | chr7.4:82533709-82533728 | MS.gene44764:intron | 50.0% | |
| TACCAGATGTTGGGACTGTG+AGG | - | chr7.4:82536069-82536088 | MS.gene44764:CDS | 50.0% | |
| TCATCAGCCAAGCAAACCAC+TGG | + | chr7.4:82534349-82534368 | None:intergenic | 50.0% | |
| TGCACTGTCAGCTAGACTCT+CGG | + | chr7.4:82533294-82533313 | None:intergenic | 50.0% | |
| TGCCAGGCGGTCCTTAAAAA+TGG | - | chr7.4:82534040-82534059 | MS.gene44764:intron | 50.0% | |
| TTGCTTACAATCGAGACCGG+AGG | + | chr7.4:82535409-82535428 | None:intergenic | 50.0% | |
| TTGTCAGGAGCCTATGGTCT+AGG | - | chr7.4:82533715-82533734 | MS.gene44764:intron | 50.0% | |
| ! | AGAGAGGTTGGTTGAATCCG+AGG | - | chr7.4:82531714-82531733 | MS.gene44764:intron | 50.0% |
| ! | CAGTGTCGAGTAGTGCTCTA+TGG | + | chr7.4:82535764-82535783 | None:intergenic | 50.0% |
| ! | GACTGATTTACAGCTGCAGC+AGG | - | chr7.4:82533163-82533182 | MS.gene44764:intron | 50.0% |
| !! | GCTGATGATGGGATGTATGG+AGG | - | chr7.4:82534361-82534380 | MS.gene44764:CDS | 50.0% |
| !! | GTCCATTTTTAAGGACCGCC+TGG | + | chr7.4:82534045-82534064 | None:intergenic | 50.0% |
| !! | GTGGTTTGCTTGGCTGATGA+TGG | - | chr7.4:82534349-82534368 | MS.gene44764:CDS | 50.0% |
| CAATGCGCGTGAGATCCTGA+AGG | - | chr7.4:82532659-82532678 | MS.gene44764:intron | 55.0% | |
| CCTATGGTCTAGGCAACGTC+AGG | - | chr7.4:82533725-82533744 | MS.gene44764:intron | 55.0% | |
| CCTGACGTTGCCTAGACCAT+AGG | + | chr7.4:82533728-82533747 | None:intergenic | 55.0% | |
| CTCCTCACAGTCCCAACATC+TGG | + | chr7.4:82536074-82536093 | None:intergenic | 55.0% | |
| GAGTCTAGCTGACAGTGCAG+AGG | - | chr7.4:82533295-82533314 | MS.gene44764:intron | 55.0% | |
| GGAGGGATCACTGCAGAAAG+CGG | - | chr7.4:82533397-82533416 | MS.gene44764:intron | 55.0% | |
| TAGGTGAGGTGGGAATCGGT+AGG | + | chr7.4:82534147-82534166 | None:intergenic | 55.0% | |
| GAGGTGGGAATCGGTAGGCT+AGG | + | chr7.4:82534142-82534161 | None:intergenic | 60.0% | |
| GGAATCGGTAGGCTAGGCTC+GGG | + | chr7.4:82534136-82534155 | None:intergenic | 60.0% | |
| GGGAATCGGTAGGCTAGGCT+CGG | + | chr7.4:82534137-82534156 | None:intergenic | 60.0% | |
| GGGATCACTGCAGAAAGCGG+AGG | - | chr7.4:82533400-82533419 | MS.gene44764:intron | 60.0% | |
| !! | ATGTGGGGTGCTGGGTTCTG+AGG | - | chr7.4:82531606-82531625 | MS.gene44764:intron | 60.0% |
| CAGCAGGCAGTAGCGTCTGC+TGG | - | chr7.4:82533179-82533198 | MS.gene44764:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 82531367 | 82536208 | 82531367 | ID=MS.gene44764 |
| chr7.4 | mRNA | 82531367 | 82536208 | 82531367 | ID=MS.gene44764.t1;Parent=MS.gene44764 |
| chr7.4 | exon | 82535764 | 82536208 | 82535764 | ID=MS.gene44764.t1.exon1;Parent=MS.gene44764.t1 |
| chr7.4 | CDS | 82535764 | 82536208 | 82535764 | ID=cds.MS.gene44764.t1;Parent=MS.gene44764.t1 |
| chr7.4 | exon | 82534052 | 82535184 | 82534052 | ID=MS.gene44764.t1.exon2;Parent=MS.gene44764.t1 |
| chr7.4 | CDS | 82534052 | 82535184 | 82534052 | ID=cds.MS.gene44764.t1;Parent=MS.gene44764.t1 |
| chr7.4 | exon | 82532981 | 82533088 | 82532981 | ID=MS.gene44764.t1.exon3;Parent=MS.gene44764.t1 |
| chr7.4 | CDS | 82532981 | 82533088 | 82532981 | ID=cds.MS.gene44764.t1;Parent=MS.gene44764.t1 |
| chr7.4 | exon | 82531367 | 82531564 | 82531367 | ID=MS.gene44764.t1.exon4;Parent=MS.gene44764.t1 |
| chr7.4 | CDS | 82531367 | 82531564 | 82531367 | ID=cds.MS.gene44764.t1;Parent=MS.gene44764.t1 |
| Gene Sequence |
| Protein sequence |
