Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62009.t1 | XP_003621609.1 | 83.5 | 624 | 102 | 1 | 1 | 624 | 1 | 623 | 1.20E-210 | 743 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62009.t1 | Q8L7E5 | 30.3 | 661 | 407 | 9 | 10 | 616 | 37 | 697 | 5.9e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62009.t1 | G7KS23 | 83.5 | 624 | 102 | 1 | 1 | 624 | 1 | 623 | 8.4e-211 | 743.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene62009 | 0.855282 | 7.00E-62 | -1.69E-46 |
| MS.gene049159 | MS.gene62009 | 0.838451 | 2.85E-57 | -1.69E-46 |
| MS.gene04918 | MS.gene62009 | 0.823043 | 1.71E-53 | -1.69E-46 |
| MS.gene04920 | MS.gene62009 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene62009 | 0.809023 | 2.32E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene62009 | 0.824839 | 6.49E-54 | -1.69E-46 |
| MS.gene049404 | MS.gene62009 | 0.801701 | 7.95E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene62009 | 0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene62009 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene62009 | 0.812544 | 4.02E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene62009 | 0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene62009 | 0.834487 | 2.91E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene62009 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene62009 | 0.814811 | 1.27E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene62009 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene62009 | 0.803271 | 3.77E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene62009 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene62009 | 0.83487 | 2.33E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene62009 | 0.831198 | 1.91E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene62009 | 0.811958 | 5.39E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene62009 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene62009 | 0.814007 | 1.92E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene62009 | 0.830274 | 3.22E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene62009 | 0.830219 | 3.32E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene62009 | 0.804781 | 1.83E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene62009 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene62009 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene62009 | 0.854529 | 1.16E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene62009 | 0.831527 | 1.59E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene62009 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene62009 | 0.817162 | 3.81E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene62009 | 0.816162 | 6.38E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene62009 | 0.805744 | 1.15E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene62009 | 0.831493 | 1.62E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene62009 | 0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene053122 | MS.gene62009 | 0.80603 | 1.00E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene62009 | 0.851853 | 6.77E-61 | -1.69E-46 |
| MS.gene053542 | MS.gene62009 | 0.802358 | 5.83E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene62009 | 0.810309 | 1.23E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene62009 | 0.848778 | 4.93E-60 | -1.69E-46 |
| MS.gene053931 | MS.gene62009 | 0.833008 | 6.83E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene62009 | 0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene62009 | 0.846627 | 1.93E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene62009 | 0.835743 | 1.40E-56 | -1.69E-46 |
| MS.gene054775 | MS.gene62009 | 0.827383 | 1.61E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene62009 | 0.825581 | 4.34E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene62009 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene62009 | 0.857219 | 1.89E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene62009 | 0.846095 | 2.69E-59 | -1.69E-46 |
| MS.gene055468 | MS.gene62009 | 0.857264 | 1.84E-62 | -1.69E-46 |
| MS.gene055469 | MS.gene62009 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene62009 | 0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene62009 | 0.807673 | 4.51E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene62009 | -0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene62009 | 0.801163 | 1.03E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene62009 | 0.810541 | 1.10E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene62009 | -0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene62009 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene62009 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene62009 | 0.833521 | 5.09E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene62009 | 0.824984 | 6.00E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene62009 | 0.805152 | 1.53E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene62009 | 0.829326 | 5.48E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene62009 | 0.819701 | 1.01E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene62009 | 0.808364 | 3.21E-50 | -1.69E-46 |
| MS.gene057287 | MS.gene62009 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene62009 | 0.817289 | 3.56E-52 | -1.69E-46 |
| MS.gene057446 | MS.gene62009 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene62009 | 0.835553 | 1.57E-56 | -1.69E-46 |
| MS.gene057694 | MS.gene62009 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene62009 | 0.806015 | 1.01E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene62009 | 0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene62009 | 0.817221 | 3.69E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene62009 | 0.830649 | 2.61E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene62009 | 0.804783 | 1.83E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene62009 | 0.810772 | 9.76E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene62009 | 0.810431 | 1.16E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene62009 | 0.819609 | 1.06E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene62009 | 0.820507 | 6.61E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene62009 | 0.833467 | 5.25E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene62009 | 0.846619 | 1.94E-59 | -1.69E-46 |
| MS.gene058979 | MS.gene62009 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene62009 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene059151 | MS.gene62009 | 0.812045 | 5.17E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene62009 | 0.800252 | 1.57E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene62009 | 0.815277 | 1.00E-51 | -1.69E-46 |
| MS.gene05978 | MS.gene62009 | 0.808158 | 3.55E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene62009 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene62009 | 0.859473 | 4.04E-63 | -1.69E-46 |
| MS.gene059937 | MS.gene62009 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene62009 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene62009 | 0.810774 | 9.75E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene62009 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene62009 | 0.820708 | 5.95E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene62009 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene62009 | 0.833677 | 4.65E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene62009 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene62009 | 0.823172 | 1.60E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62009 | MS.gene21699 | PPI |
| MS.gene62009 | MS.gene062634 | PPI |
| MS.gene62009 | MS.gene042816 | PPI |
| MS.gene62009 | MS.gene37411 | PPI |
| MS.gene62009 | MS.gene050436 | PPI |
| MS.gene62009 | MS.gene83287 | PPI |
| MS.gene62009 | MS.gene066515 | PPI |
| MS.gene62009 | MS.gene21929 | PPI |
| MS.gene62009 | MS.gene27182 | PPI |
| MS.gene62009 | MS.gene00765 | PPI |
| MS.gene07091 | MS.gene62009 | PPI |
| MS.gene003010 | MS.gene62009 | PPI |
| MS.gene62009 | MS.gene22271 | PPI |
| MS.gene62009 | MS.gene015001 | PPI |
| MS.gene28843 | MS.gene62009 | PPI |
| MS.gene62009 | MS.gene32800 | PPI |
| MS.gene047484 | MS.gene62009 | PPI |
| MS.gene62009 | MS.gene069778 | PPI |
| MS.gene62009 | MS.gene024720 | PPI |
| MS.gene072669 | MS.gene62009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62009.t1 | MTR_7g017690 | 95.994 | 624 | 24 | 1 | 1 | 624 | 1 | 623 | 0.0 | 1157 |
| MS.gene62009.t1 | MTR_3g086660 | 51.448 | 587 | 231 | 9 | 7 | 548 | 17 | 594 | 1.40e-157 | 467 |
| MS.gene62009.t1 | MTR_2g075260 | 52.703 | 74 | 35 | 0 | 295 | 368 | 2 | 75 | 1.12e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62009.t1 | AT5G11390 | 38.612 | 663 | 349 | 12 | 10 | 616 | 37 | 697 | 2.20e-116 | 364 |
| MS.gene62009.t1 | AT1G68910 | 32.958 | 622 | 369 | 12 | 24 | 617 | 26 | 627 | 4.85e-79 | 264 |
| MS.gene62009.t1 | AT1G68910 | 34.574 | 564 | 326 | 10 | 24 | 564 | 26 | 569 | 6.46e-78 | 259 |
| MS.gene62009.t1 | AT1G68910 | 34.574 | 564 | 326 | 10 | 24 | 564 | 26 | 569 | 6.46e-78 | 259 |
Find 94 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTCATGCTGAGATTTC+TGG | 0.165736 | 7.2:-80207144 | MS.gene62009:CDS |
| CAAGCTTTCTCAGTTCAATT+TGG | 0.215388 | 7.2:-80206089 | MS.gene62009:CDS |
| GGTTCTGAGGTTAGAGATTT+GGG | 0.265934 | 7.2:-80207180 | MS.gene62009:CDS |
| GGGTTCTGAGGTTAGAGATT+TGG | 0.291296 | 7.2:-80207181 | MS.gene62009:CDS |
| AGGAAGAAGCAATCGAAGTT+TGG | 0.300071 | 7.2:-80206183 | MS.gene62009:CDS |
| TGATTTGTTATGTGGGGTGC+TGG | 0.301024 | 7.2:-80207202 | MS.gene62009:CDS |
| ATGACAACTGCAAAGAATAT+TGG | 0.308994 | 7.2:-80205368 | MS.gene62009:CDS |
| ACAGCTGAAGCAGTTAATTT+AGG | 0.314252 | 7.2:-80205965 | MS.gene62009:CDS |
| TGACGAAGAAAACATCGATA+TGG | 0.328251 | 7.2:-80207250 | MS.gene62009:CDS |
| TATGATGAATTTGGAAACTT+TGG | 0.334665 | 7.2:-80207298 | MS.gene62009:CDS |
| GAGGATGCTTGAGAAATCTT+TGG | 0.339008 | 7.2:-80206308 | MS.gene62009:CDS |
| GTTGGAGGTGTTTCAGATAA+TGG | 0.340110 | 7.2:-80207390 | MS.gene62009:CDS |
| CTTCATTTGAAATTCCCTTC+AGG | 0.351204 | 7.2:+80206125 | None:intergenic |
| CAGCAGGCAGTAGCGTCTGC+TGG | 0.352082 | 7.2:-80205620 | MS.gene62009:CDS |
| TTTGAGTTTGATTTGTTATG+TGG | 0.355398 | 7.2:-80207210 | MS.gene62009:CDS |
| TTTGCTGACACAGTTGGCTT+TGG | 0.366680 | 7.2:-80205321 | MS.gene62009:CDS |
| TGTGACCTTTCTGTATTTCA+AGG | 0.370375 | 7.2:-80202495 | MS.gene62009:CDS |
| AACTTTGGAAGGTGAATTAG+AGG | 0.372115 | 7.2:-80207283 | MS.gene62009:CDS |
| AGCAAGCGAGAACAAACTTT+TGG | 0.375212 | 7.2:-80204304 | MS.gene62009:CDS |
| GTGTTACACAATTGAAGATA+TGG | 0.376803 | 7.2:-80205570 | MS.gene62009:CDS |
| TTGAGTTTGATTTGTTATGT+GGG | 0.386095 | 7.2:-80207209 | MS.gene62009:CDS |
| AAGTTTCTTGAGGAGTAGAT+TGG | 0.388441 | 7.2:-80205432 | MS.gene62009:CDS |
| TTTCTTTCAATTCTACGATA+AGG | 0.399271 | 7.2:+80205813 | None:intergenic |
| GAGATTCTTCTTTGAACGAT+TGG | 0.400387 | 7.2:-80207110 | MS.gene62009:CDS |
| GGAAGAAGCAATCGAAGTTT+GGG | 0.409580 | 7.2:-80206182 | MS.gene62009:CDS |
| ATACTGTTGCTGATATTCAT+TGG | 0.419288 | 7.2:+80205871 | None:intergenic |
| AGATATGGAACATGTGATAA+AGG | 0.420057 | 7.2:-80205555 | MS.gene62009:CDS |
| TCGAAGTTTGATCATCCTCT+TGG | 0.428130 | 7.2:+80206383 | None:intergenic |
| CTTTCTCAGTTCAATTTGGT+TGG | 0.429559 | 7.2:-80206085 | MS.gene62009:CDS |
| GACTTTGTCTTCTTATAAGA+AGG | 0.441599 | 7.2:-80207019 | MS.gene62009:CDS |
| CTTCTCACAGTCCCAACATC+TGG | 0.449927 | 7.2:+80202584 | None:intergenic |
| GGGAATTTCAAATGAAGTGT+TGG | 0.466188 | 7.2:-80206119 | MS.gene62009:CDS |
| TTCCAGCTTATCTCTAAGCT+CGG | 0.467512 | 7.2:+80206045 | None:intergenic |
| TTGGCAGGGACTTGCAGAAT+GGG | 0.469681 | 7.2:-80202394 | MS.gene62009:intron |
| AGACTTTCACATTCACCAAC+TGG | 0.472930 | 7.2:+80205897 | None:intergenic |
| ACTGAAGCAAACATATAAGA+AGG | 0.478500 | 7.2:-80204274 | MS.gene62009:CDS |
| ATCACCATACTGCACTTGTA+AGG | 0.488815 | 7.2:+80202318 | None:intergenic |
| ATCCGAGCTTAGAGATAAGC+TGG | 0.490624 | 7.2:-80206047 | MS.gene62009:CDS |
| TTAACTCGTCTTCTAAAGAA+AGG | 0.496891 | 7.2:+80206215 | None:intergenic |
| GGGACTTGCAGAATGGGAAA+TGG | 0.497912 | 7.2:-80202388 | MS.gene62009:CDS |
| GATTTGTTATGTGGGGTGCT+GGG | 0.499035 | 7.2:-80207201 | MS.gene62009:CDS |
| CAGATTCAATACCAGATGTT+GGG | 0.500850 | 7.2:-80202595 | MS.gene62009:CDS |
| GACTGATTTACAGCTGCAGC+AGG | 0.504375 | 7.2:-80205636 | MS.gene62009:CDS |
| ATGTGGGGTGCTGGGTTCTG+AGG | 0.507959 | 7.2:-80207193 | MS.gene62009:CDS |
| GAACGATTGGCAAGAGAGGT+TGG | 0.512420 | 7.2:-80207097 | MS.gene62009:CDS |
| GTTACTTGAAAGGCAGCTAA+AGG | 0.514392 | 7.2:-80205660 | MS.gene62009:CDS |
| CTTGGCAGGGACTTGCAGAA+TGG | 0.514670 | 7.2:-80202395 | MS.gene62009:intron |
| GAGAGAGCGTCTTAATAAGA+AGG | 0.518789 | 7.2:-80205297 | MS.gene62009:intron |
| GAGTAGATTGGAATGCTTGG+AGG | 0.519165 | 7.2:-80205420 | MS.gene62009:CDS |
| TCAGATTCAATACCAGATGT+TGG | 0.521726 | 7.2:-80202596 | MS.gene62009:CDS |
| AAGTTTGTTCTCGCTTGCTA+AGG | 0.523128 | 7.2:+80204308 | None:intergenic |
| TTTGTTCTCGCTTGCTAAGG+AGG | 0.527329 | 7.2:+80204311 | None:intergenic |
| GATAAAGGATCTTAAGTCAA+AGG | 0.527438 | 7.2:-80205540 | MS.gene62009:CDS |
| TAAAAGTTTGCTGACACAGT+TGG | 0.530211 | 7.2:-80205327 | MS.gene62009:CDS |
| CTTTGAACGATTGGCAAGAG+AGG | 0.530964 | 7.2:-80207101 | MS.gene62009:CDS |
| CAAAGTGTTGAAGATAATAC+CGG | 0.537217 | 7.2:-80207423 | MS.gene62009:CDS |
| GAGGAGTAGATTGGAATGCT+TGG | 0.538497 | 7.2:-80205423 | MS.gene62009:CDS |
| AGATAATGGAGAAGTTATTG+TGG | 0.538820 | 7.2:-80207376 | MS.gene62009:CDS |
| GAATCCTTACAAGTGCAGTA+TGG | 0.542027 | 7.2:-80202322 | MS.gene62009:CDS |
| ACGAGGAAGTAAGTTTCTTG+AGG | 0.550455 | 7.2:-80205442 | MS.gene62009:CDS |
| CAAGTCCTTGAAATACAGAA+AGG | 0.560321 | 7.2:+80202490 | None:intergenic |
| AGTTTGGGAAAGATTGTTTG+AGG | 0.560777 | 7.2:-80206167 | MS.gene62009:CDS |
| GACTTTGTCTTCTGAGCATG+AGG | 0.562788 | 7.2:-80204229 | MS.gene62009:intron |
| GGGAAATGGCATCATATGAA+AGG | 0.567277 | 7.2:-80202374 | MS.gene62009:CDS |
| ATGAATTTGGAAACTTTGGA+AGG | 0.568364 | 7.2:-80207294 | MS.gene62009:CDS |
| TGAGTTTGATTTGTTATGTG+GGG | 0.573199 | 7.2:-80207208 | MS.gene62009:CDS |
| TCTTATAAGAAGGAAGAGAA+TGG | 0.577851 | 7.2:-80207009 | MS.gene62009:intron |
| ACCTCCAACATCAACATCAC+CGG | 0.581822 | 7.2:+80207404 | None:intergenic |
| ACTGTGAGAAGAATAGATGC+AGG | 0.582050 | 7.2:-80202572 | MS.gene62009:CDS |
| ACCGGTGATGTTGATGTTGG+AGG | 0.584105 | 7.2:-80207405 | MS.gene62009:CDS |
| AGTAGATTGGAATGCTTGGA+GGG | 0.587529 | 7.2:-80205419 | MS.gene62009:CDS |
| TGCACTGTCAGCTAGACTCT+CGG | 0.590430 | 7.2:+80205508 | None:intergenic |
| AATACCGGTGATGTTGATGT+TGG | 0.597119 | 7.2:-80207408 | MS.gene62009:CDS |
| AGAGAGGTTGGTTGAATCCG+AGG | 0.600549 | 7.2:-80207085 | MS.gene62009:CDS |
| ACAGAAAGGTCACAACTGAA+AGG | 0.606504 | 7.2:+80202504 | None:intergenic |
| GGAGGGATCACTGCAGAAAG+CGG | 0.612584 | 7.2:-80205402 | MS.gene62009:CDS |
| AGAGTGTAGAGTTACTTGAA+AGG | 0.618606 | 7.2:-80205670 | MS.gene62009:CDS |
| CTGAAGCAAACATATAAGAA+GGG | 0.621626 | 7.2:-80204273 | MS.gene62009:CDS |
| GTGTTCTCAAGTTAGAGACA+TGG | 0.624574 | 7.2:-80205840 | MS.gene62009:CDS |
| GAGTCTAGCTGACAGTGCAG+AGG | 0.624641 | 7.2:-80205504 | MS.gene62009:CDS |
| AATCTCGTAAAACTGCTCCT+CGG | 0.624682 | 7.2:+80207068 | None:intergenic |
| TTGAAGAAAAGCTAAATCTG+AGG | 0.628560 | 7.2:-80206240 | MS.gene62009:CDS |
| AGACGAGTTAATTCAAACAG+AGG | 0.633790 | 7.2:-80206203 | MS.gene62009:CDS |
| GTATGGTGATGCAGCTGTAG+AGG | 0.637203 | 7.2:-80202305 | None:intergenic |
| ACAAGAAACTGAATGCCAGT+TGG | 0.639494 | 7.2:-80205912 | MS.gene62009:CDS |
| ACTTTGGAAGGTGAATTAGA+GGG | 0.646483 | 7.2:-80207282 | MS.gene62009:CDS |
| CAATGCGCGTGAGATCCTGA+AGG | 0.651405 | 7.2:-80206140 | MS.gene62009:CDS |
| AACTAATGAAGAACTCAACA+AGG | 0.662178 | 7.2:-80205729 | MS.gene62009:CDS |
| GGGATCACTGCAGAAAGCGG+AGG | 0.666512 | 7.2:-80205399 | MS.gene62009:CDS |
| ACAACAGGGAATGTTGAAGA+CGG | 0.671738 | 7.2:-80206415 | MS.gene62009:intron |
| AATGCGCGTGAGATCCTGAA+GGG | 0.678003 | 7.2:-80206139 | MS.gene62009:CDS |
| ATCTAATGCTGATTTAAACG+AGG | 0.690867 | 7.2:-80205459 | MS.gene62009:CDS |
| ACAGGGAATGTTGAAGACGG+TGG | 0.694865 | 7.2:-80206412 | MS.gene62009:intron |
| AGACGGTGGAAATGTCCAAG+AGG | 0.721239 | 7.2:-80206398 | MS.gene62009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTTATATAATAATAA+TGG | + | chr7.2:80204785-80204804 | None:intergenic | 10.0% |
| !! | TTATTAGAAATGAAAATTTA+GGG | + | chr7.2:80203267-80203286 | None:intergenic | 10.0% |
| !! | TTTACCATTATTATTATATA+AGG | - | chr7.2:80204778-80204797 | MS.gene62009:intron | 10.0% |
| !! | TTTATTAGAAATGAAAATTT+AGG | + | chr7.2:80203268-80203287 | None:intergenic | 10.0% |
| !!! | GTTAAATATTTTTCTTTTTA+TGG | - | chr7.2:80206147-80206166 | MS.gene62009:CDS | 10.0% |
| !!! | TTGTTTTAAAAAATAAGAAA+AGG | - | chr7.2:80202982-80203001 | MS.gene62009:intron | 10.0% |
| !! | AATAAATAAAGAACAATATC+AGG | + | chr7.2:80206924-80206943 | None:intergenic | 15.0% |
| !! | ATTCAAATACTGAAATATAT+AGG | + | chr7.2:80205104-80205123 | None:intergenic | 15.0% |
| !!! | ACATAAATGTTTAAAACAAA+TGG | + | chr7.2:80205329-80205348 | None:intergenic | 15.0% |
| !!! | ATATTTTGAAACAATTGTTA+AGG | + | chr7.2:80206037-80206056 | None:intergenic | 15.0% |
| !!! | CATAAATGTTTAAAACAAAT+GGG | + | chr7.2:80205328-80205347 | None:intergenic | 15.0% |
| !!! | TACTATTTCTATTAAATTGT+TGG | - | chr7.2:80206375-80206394 | MS.gene62009:CDS | 15.0% |
| !! | AAATGTATTTGTTTCATCTT+AGG | - | chr7.2:80205611-80205630 | MS.gene62009:CDS | 20.0% |
| !! | AATAAATGTAAAACAGTACT+TGG | - | chr7.2:80206287-80206306 | MS.gene62009:CDS | 20.0% |
| !! | AATAGCATTAAATACAATGA+AGG | + | chr7.2:80206558-80206577 | None:intergenic | 20.0% |
| !! | AATGTATTTGTTTCATCTTA+GGG | - | chr7.2:80205612-80205631 | MS.gene62009:CDS | 20.0% |
| !! | ATAAAAATATTCTCATTGGT+CGG | + | chr7.2:80203044-80203063 | None:intergenic | 20.0% |
| !! | ATATCACATGAAAATTAATG+TGG | + | chr7.2:80202895-80202914 | None:intergenic | 20.0% |
| !! | ATTAATCAACATAAATAACC+AGG | - | chr7.2:80204576-80204595 | MS.gene62009:intron | 20.0% |
| !! | CAAAAATATGTCTCTAAATA+TGG | + | chr7.2:80205656-80205675 | None:intergenic | 20.0% |
| !! | GAAAAATATTTAACTAAGCT+AGG | + | chr7.2:80206141-80206160 | None:intergenic | 20.0% |
| !! | TAATTCATATACACAATCAA+TGG | + | chr7.2:80203242-80203261 | None:intergenic | 20.0% |
| !! | TCAGATAAAAATATTCTCAT+TGG | + | chr7.2:80203048-80203067 | None:intergenic | 20.0% |
| !! | TTAATCAACATAAATAACCA+GGG | - | chr7.2:80204577-80204596 | MS.gene62009:intron | 20.0% |
| !! | TTCATTTAGTTGTTAGAAAA+GGG | - | chr7.2:80202854-80202873 | MS.gene62009:intron | 20.0% |
| !! | TTTCATTTAGTTGTTAGAAA+AGG | - | chr7.2:80202853-80202872 | MS.gene62009:intron | 20.0% |
| !!! | AACAATCTTTTAGTTTTGAA+AGG | - | chr7.2:80202699-80202718 | MS.gene62009:intron | 20.0% |
| !!! | GAGTATTTTTATGATGAATT+TGG | - | chr7.2:80202433-80202452 | MS.gene62009:intron | 20.0% |
| !!! | GTATGTTTAAGTTACATAAA+AGG | + | chr7.2:80204838-80204857 | None:intergenic | 20.0% |
| !!! | TAAAGTGTTATTTGTTAGTT+AGG | - | chr7.2:80206252-80206271 | MS.gene62009:CDS | 20.0% |
| ! | AAAAAAAAAAGGGGACAATT+TGG | + | chr7.2:80206895-80206914 | None:intergenic | 25.0% |
| ! | AAATCAAAGAGGAGAAAAAA+AGG | + | chr7.2:80205146-80205165 | None:intergenic | 25.0% |
| ! | AAGGACAAAAATTTCAACTA+AGG | + | chr7.2:80205396-80205415 | None:intergenic | 25.0% |
| ! | AATACTGAAATATATAGGTG+AGG | + | chr7.2:80205099-80205118 | None:intergenic | 25.0% |
| ! | AGCATTATTGAAGTGTATTA+TGG | + | chr7.2:80206585-80206604 | None:intergenic | 25.0% |
| ! | AGGAAAGGAAAAAAAAAAAG+GGG | + | chr7.2:80206904-80206923 | None:intergenic | 25.0% |
| ! | AGTTCAGTGTAAAAAATTGA+CGG | - | chr7.2:80203987-80204006 | MS.gene62009:intron | 25.0% |
| ! | ATAAAGAACAATATCAGGAA+AGG | + | chr7.2:80206919-80206938 | None:intergenic | 25.0% |
| ! | ATAATACACTTCAATAATGC+TGG | - | chr7.2:80206584-80206603 | MS.gene62009:intron | 25.0% |
| ! | ATTATGGTATTATCTTCTGT+TGG | - | chr7.2:80206780-80206799 | MS.gene62009:intron | 25.0% |
| ! | CAGGAAAGGAAAAAAAAAAA+GGG | + | chr7.2:80206905-80206924 | None:intergenic | 25.0% |
| ! | GAAAAATAGAGACGTTAATT+TGG | - | chr7.2:80203735-80203754 | MS.gene62009:intron | 25.0% |
| ! | GAAAATCCAACACATAAAAA+AGG | + | chr7.2:80203301-80203320 | None:intergenic | 25.0% |
| ! | GTAAAACATTGTCTTGTATT+AGG | - | chr7.2:80205912-80205931 | MS.gene62009:CDS | 25.0% |
| ! | GTAATAACAGAAGAGAAATA+TGG | - | chr7.2:80207030-80207049 | MS.gene62009:CDS | 25.0% |
| ! | TAAAATCTCATACTATAGTC+AGG | + | chr7.2:80205360-80205379 | None:intergenic | 25.0% |
| ! | TAACAACTAAATGAAAAGAC+AGG | + | chr7.2:80202849-80202868 | None:intergenic | 25.0% |
| ! | TATGATGAATTTGGAAACTT+TGG | - | chr7.2:80202442-80202461 | MS.gene62009:intron | 25.0% |
| ! | TATTCAAGAGAGATATTATC+AGG | + | chr7.2:80204526-80204545 | None:intergenic | 25.0% |
| ! | TCAGGAAAGGAAAAAAAAAA+AGG | + | chr7.2:80206906-80206925 | None:intergenic | 25.0% |
| ! | TTAAAAAATGGACCTATAAC+AGG | - | chr7.2:80204990-80205009 | MS.gene62009:intron | 25.0% |
| ! | TTAACAACTGTAGTTATGTA+TGG | - | chr7.2:80205186-80205205 | MS.gene62009:intron | 25.0% |
| ! | TTTCTTTCAATTCTACGATA+AGG | + | chr7.2:80203930-80203949 | None:intergenic | 25.0% |
| ! | TTTGAATGTACTAACATTCA+TGG | - | chr7.2:80206101-80206120 | MS.gene62009:CDS | 25.0% |
| !! | AGAAAATAAAAAGCATAGTC+TGG | + | chr7.2:80204698-80204717 | None:intergenic | 25.0% |
| !! | ATTTGATTCTAAAAAAGTGC+TGG | + | chr7.2:80204741-80204760 | None:intergenic | 25.0% |
| !! | GTTTAAGTTACATAAAAGGT+TGG | + | chr7.2:80204834-80204853 | None:intergenic | 25.0% |
| !! | TGTTTGATCTATAGTGTTTT+TGG | - | chr7.2:80205973-80205992 | MS.gene62009:CDS | 25.0% |
| !! | TTTTACGACAAAGTTATCTT+TGG | - | chr7.2:80205711-80205730 | MS.gene62009:CDS | 25.0% |
| !!! | AAAAGTTGATACGACATATA+AGG | + | chr7.2:80206222-80206241 | None:intergenic | 25.0% |
| !!! | CAGCAAACTTTTAAAAACTT+TGG | + | chr7.2:80204406-80204425 | None:intergenic | 25.0% |
| !!! | CATGAAACATTCATGTTTTT+TGG | - | chr7.2:80206507-80206526 | MS.gene62009:intron | 25.0% |
| !!! | CTTCAATCAAGTTGATTTAT+AGG | + | chr7.2:80205244-80205263 | None:intergenic | 25.0% |
| !!! | GATATGGATTGTGTTTTAAA+GGG | - | chr7.2:80202506-80202525 | MS.gene62009:CDS | 25.0% |
| !!! | TGTTATAGGTCCATTTTTTA+AGG | + | chr7.2:80204991-80205010 | None:intergenic | 25.0% |
| !!! | TTGAGTTTGATTTGTTATGT+GGG | - | chr7.2:80202531-80202550 | MS.gene62009:CDS | 25.0% |
| !!! | TTTGAGTTTGATTTGTTATG+TGG | - | chr7.2:80202530-80202549 | MS.gene62009:CDS | 25.0% |
| !!! | TTTTGAAACAATTGTTAAGG+AGG | + | chr7.2:80206034-80206053 | None:intergenic | 25.0% |
| AAAAAGACTAACAAGCTCAT+AGG | + | chr7.2:80204875-80204894 | None:intergenic | 30.0% | |
| AAACAATTTGAACACACTAG+TGG | + | chr7.2:80205958-80205977 | None:intergenic | 30.0% | |
| AACAGAAATATACTGCCAAT+AGG | + | chr7.2:80206083-80206102 | None:intergenic | 30.0% | |
| AACTAATGAAGAACTCAACA+AGG | - | chr7.2:80204011-80204030 | MS.gene62009:intron | 30.0% | |
| AACTACAGTTGTTAAACTCA+AGG | + | chr7.2:80205181-80205200 | None:intergenic | 30.0% | |
| AATTTCAACTAAGGATGAAC+AGG | + | chr7.2:80205387-80205406 | None:intergenic | 30.0% | |
| ACAATTAAAACGAGAAGAGT+CGG | - | chr7.2:80206610-80206629 | MS.gene62009:intron | 30.0% | |
| ACTGAAGCAAACATATAAGA+AGG | - | chr7.2:80205466-80205485 | MS.gene62009:CDS | 30.0% | |
| AGATATGGAACATGTGATAA+AGG | - | chr7.2:80204185-80204204 | MS.gene62009:intron | 30.0% | |
| AGTTAGAACATTAACATTGC+TGG | + | chr7.2:80203187-80203206 | None:intergenic | 30.0% | |
| ATACTGTTGCTGATATTCAT+TGG | + | chr7.2:80203872-80203891 | None:intergenic | 30.0% | |
| ATGAATTTGGAAACTTTGGA+AGG | - | chr7.2:80202446-80202465 | MS.gene62009:intron | 30.0% | |
| ATGACAACTGCAAAGAATAT+TGG | - | chr7.2:80204372-80204391 | MS.gene62009:intron | 30.0% | |
| CAACTTGATTGAAGATTCAT+AGG | - | chr7.2:80205250-80205269 | MS.gene62009:intron | 30.0% | |
| CGGCAATAAATCTCATAAAA+GGG | - | chr7.2:80206630-80206649 | MS.gene62009:intron | 30.0% | |
| CTCATGTTAAAACATCCTAT+TGG | - | chr7.2:80206065-80206084 | MS.gene62009:CDS | 30.0% | |
| CTGAAGCAAACATATAAGAA+GGG | - | chr7.2:80205467-80205486 | MS.gene62009:CDS | 30.0% | |
| GAAACAAGATTTCAAAAGCT+TGG | + | chr7.2:80204475-80204494 | None:intergenic | 30.0% | |
| GAACTAGTGGGAAAAAAAAA+AGG | + | chr7.2:80205876-80205895 | None:intergenic | 30.0% | |
| GACTTTGTCTTCTTATAAGA+AGG | - | chr7.2:80202721-80202740 | MS.gene62009:intron | 30.0% | |
| GAGTTCCATTAATGCAAAAT+AGG | + | chr7.2:80202955-80202974 | None:intergenic | 30.0% | |
| GATAAAGGATCTTAAGTCAA+AGG | - | chr7.2:80204200-80204219 | MS.gene62009:intron | 30.0% | |
| GTGTTACACAATTGAAGATA+TGG | - | chr7.2:80204170-80204189 | MS.gene62009:intron | 30.0% | |
| TAAACAACTTTCAAAATGCC+AGG | - | chr7.2:80204961-80204980 | MS.gene62009:intron | 30.0% | |
| TATGAAGTCACACATATGAT+TGG | + | chr7.2:80203138-80203157 | None:intergenic | 30.0% | |
| TCGGCAATAAATCTCATAAA+AGG | - | chr7.2:80206629-80206648 | MS.gene62009:intron | 30.0% | |
| TCTTATAAGAAGGAAGAGAA+TGG | - | chr7.2:80202731-80202750 | MS.gene62009:intron | 30.0% | |
| TCTTGCCTTTCCAAAAATAA+AGG | + | chr7.2:80207310-80207329 | None:intergenic | 30.0% | |
| TGAAAGTGGAAAAATCAAAG+AGG | + | chr7.2:80205157-80205176 | None:intergenic | 30.0% | |
| TTGAAGAAAAGCTAAATCTG+AGG | - | chr7.2:80203500-80203519 | MS.gene62009:intron | 30.0% | |
| ! | AAAATGACTTGCATAAGTAG+TGG | - | chr7.2:80205682-80205701 | MS.gene62009:CDS | 30.0% |
| ! | AAACGCCTATTTTGCATTAA+TGG | - | chr7.2:80202947-80202966 | MS.gene62009:intron | 30.0% |
| ! | AGCAACATAGAAACATTTTG+AGG | - | chr7.2:80203413-80203432 | MS.gene62009:intron | 30.0% |
| ! | ATAATTTGTGTCAACAAGAG+GGG | - | chr7.2:80204623-80204642 | MS.gene62009:intron | 30.0% |
| ! | ATATGCACATATTTCTAACC+AGG | + | chr7.2:80206330-80206349 | None:intergenic | 30.0% |
| ! | ATGACTACTTTGAGAATGTT+AGG | + | chr7.2:80205034-80205053 | None:intergenic | 30.0% |
| ! | GATAATTTGTGTCAACAAGA+GGG | - | chr7.2:80204622-80204641 | MS.gene62009:intron | 30.0% |
| ! | GGACTGCATAATTACTATTT+TGG | - | chr7.2:80206408-80206427 | MS.gene62009:CDS | 30.0% |
| ! | TGATAATTTGTGTCAACAAG+AGG | - | chr7.2:80204621-80204640 | MS.gene62009:intron | 30.0% |
| ! | TTAACTCGTCTTCTAAAGAA+AGG | + | chr7.2:80203528-80203547 | None:intergenic | 30.0% |
| ! | TTGGATTTTCAATGACAACA+GGG | - | chr7.2:80203311-80203330 | MS.gene62009:intron | 30.0% |
| !! | AGATAATGGAGAAGTTATTG+TGG | - | chr7.2:80202364-80202383 | MS.gene62009:CDS | 30.0% |
| !! | ATCTAATGCTGATTTAAACG+AGG | - | chr7.2:80204281-80204300 | MS.gene62009:CDS | 30.0% |
| !! | CAAAGTGTTGAAGATAATAC+CGG | - | chr7.2:80202317-80202336 | MS.gene62009:CDS | 30.0% |
| !! | CGATATGGATTGTGTTTTAA+AGG | - | chr7.2:80202505-80202524 | MS.gene62009:CDS | 30.0% |
| !! | TAGAGATTTGGGTTTGTTTT+TGG | - | chr7.2:80202571-80202590 | MS.gene62009:CDS | 30.0% |
| !! | TGAGTTTGATTTGTTATGTG+GGG | - | chr7.2:80202532-80202551 | MS.gene62009:CDS | 30.0% |
| !!! | ACCTACCTTTATTTTTGGAA+AGG | - | chr7.2:80207302-80207321 | MS.gene62009:CDS | 30.0% |
| !!! | ATAGGATGTTTTAACATGAG+TGG | + | chr7.2:80206065-80206084 | None:intergenic | 30.0% |
| !!! | CAACAAATCGTCGTTTTTAA+GGG | + | chr7.2:80207399-80207418 | None:intergenic | 30.0% |
| !!! | GATTGACCTACCTTTATTTT+TGG | - | chr7.2:80207297-80207316 | MS.gene62009:CDS | 30.0% |
| !!! | TAAATTGTTGGCTCTGATTT+TGG | - | chr7.2:80206387-80206406 | MS.gene62009:CDS | 30.0% |
| !!! | TCAACAAATCGTCGTTTTTA+AGG | + | chr7.2:80207400-80207419 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTCTCTAACTAT+TGG | - | chr7.2:80205990-80206009 | MS.gene62009:CDS | 30.0% |
| !!! | TTTTTTTTCCCACTAGTTCA+TGG | - | chr7.2:80205877-80205896 | MS.gene62009:CDS | 30.0% |
| AAAAAAGGGGACAATTTGGA+AGG | + | chr7.2:80206891-80206910 | None:intergenic | 35.0% | |
| AAGTTTCTTGAGGAGTAGAT+TGG | - | chr7.2:80204308-80204327 | MS.gene62009:CDS | 35.0% | |
| ACAGCTGAAGCAGTTAATTT+AGG | - | chr7.2:80203775-80203794 | MS.gene62009:intron | 35.0% | |
| ACCATAATACTTACTCCCTT+CGG | + | chr7.2:80206768-80206787 | None:intergenic | 35.0% | |
| ACTGAAATATATAGGTGAGG+TGG | + | chr7.2:80205096-80205115 | None:intergenic | 35.0% | |
| AGACGAGTTAATTCAAACAG+AGG | - | chr7.2:80203537-80203556 | MS.gene62009:intron | 35.0% | |
| AGAGTGTAGAGTTACTTGAA+AGG | - | chr7.2:80204070-80204089 | MS.gene62009:intron | 35.0% | |
| AGTTTGGGAAAGATTGTTTG+AGG | - | chr7.2:80203573-80203592 | MS.gene62009:intron | 35.0% | |
| ATAGGATGAACATTTAGCAG+TGG | - | chr7.2:80205268-80205287 | MS.gene62009:intron | 35.0% | |
| ATGGACCTATAACAGGTAAT+AGG | - | chr7.2:80204997-80205016 | MS.gene62009:intron | 35.0% | |
| ATGTTGATGTCAGTCTATGA+AGG | - | chr7.2:80207274-80207293 | MS.gene62009:CDS | 35.0% | |
| CAAGCTTTCTCAGTTCAATT+TGG | - | chr7.2:80203651-80203670 | MS.gene62009:intron | 35.0% | |
| CAAGTCCTTGAAATACAGAA+AGG | + | chr7.2:80207253-80207272 | None:intergenic | 35.0% | |
| CAGATTCAATACCAGATGTT+GGG | - | chr7.2:80207145-80207164 | MS.gene62009:CDS | 35.0% | |
| CATATGTGTGACTTCATAAG+TGG | - | chr7.2:80203140-80203159 | MS.gene62009:intron | 35.0% | |
| CTGAAATATATAGGTGAGGT+GGG | + | chr7.2:80205095-80205114 | None:intergenic | 35.0% | |
| CTTTCTCAGTTCAATTTGGT+TGG | - | chr7.2:80203655-80203674 | MS.gene62009:intron | 35.0% | |
| GAGATATTATCAGGTCTCTA+TGG | + | chr7.2:80204517-80204536 | None:intergenic | 35.0% | |
| GAGATTCTTCTTTGAACGAT+TGG | - | chr7.2:80202630-80202649 | MS.gene62009:CDS | 35.0% | |
| GCCTTTCCAAAAATAAAGGT+AGG | + | chr7.2:80207306-80207325 | None:intergenic | 35.0% | |
| GGGAATTTCAAATGAAGTGT+TGG | - | chr7.2:80203621-80203640 | MS.gene62009:intron | 35.0% | |
| GTAAACACAATTACTTCCTC+CGG | - | chr7.2:80206464-80206483 | MS.gene62009:intron | 35.0% | |
| GTTAAACTCAAGGTTGAAAG+TGG | + | chr7.2:80205171-80205190 | None:intergenic | 35.0% | |
| TCAGATTCAATACCAGATGT+TGG | - | chr7.2:80207144-80207163 | MS.gene62009:CDS | 35.0% | |
| TCTATGGCAGTATAATGTAG+TGG | + | chr7.2:80204501-80204520 | None:intergenic | 35.0% | |
| TGACGAAGAAAACATCGATA+TGG | - | chr7.2:80202490-80202509 | MS.gene62009:CDS | 35.0% | |
| TGTGACCTTTCTGTATTTCA+AGG | - | chr7.2:80207245-80207264 | MS.gene62009:CDS | 35.0% | |
| TGTTGATGTCAGTCTATGAA+GGG | - | chr7.2:80207275-80207294 | MS.gene62009:CDS | 35.0% | |
| TTCCCCTGGAAAAGAAAAAT+AGG | + | chr7.2:80207081-80207100 | None:intergenic | 35.0% | |
| ! | AACTTTGGAAGGTGAATTAG+AGG | - | chr7.2:80202457-80202476 | MS.gene62009:intron | 35.0% |
| ! | ACTTTGGAAGGTGAATTAGA+GGG | - | chr7.2:80202458-80202477 | MS.gene62009:intron | 35.0% |
| ! | AGAGTCTAGATTTTTCACAC+TGG | + | chr7.2:80203102-80203121 | None:intergenic | 35.0% |
| ! | ATAAAAAGCATAGTCTGGCT+TGG | + | chr7.2:80204693-80204712 | None:intergenic | 35.0% |
| ! | CTTCATTTGAAATTCCCTTC+AGG | + | chr7.2:80203618-80203637 | None:intergenic | 35.0% |
| ! | GTTGGATTTTCAATGACAAC+AGG | - | chr7.2:80203310-80203329 | MS.gene62009:intron | 35.0% |
| ! | TAAAAAGCATAGTCTGGCTT+GGG | + | chr7.2:80204692-80204711 | None:intergenic | 35.0% |
| ! | TTTTTGCTTACAATCGAGAC+CGG | + | chr7.2:80206486-80206505 | None:intergenic | 35.0% |
| !! | CTATTGTATGGCTTTGGATA+TGG | - | chr7.2:80205792-80205811 | MS.gene62009:CDS | 35.0% |
| !! | CTCCTATTTTTCTTTTCCAG+GGG | - | chr7.2:80207076-80207095 | MS.gene62009:CDS | 35.0% |
| !! | CTGACTCTTTTAAAAGACTG+TGG | - | chr7.2:80204036-80204055 | MS.gene62009:intron | 35.0% |
| !! | GCTCCTATTTTTCTTTTCCA+GGG | - | chr7.2:80207075-80207094 | MS.gene62009:CDS | 35.0% |
| !! | TAAAAGTTTGCTGACACAGT+TGG | - | chr7.2:80204413-80204432 | MS.gene62009:intron | 35.0% |
| !! | TAGAAAAGGGTATCGTATGT+GGG | - | chr7.2:80202867-80202886 | MS.gene62009:intron | 35.0% |
| !! | TCTTTTTATGGTAGTCTTGC+TGG | - | chr7.2:80206159-80206178 | MS.gene62009:CDS | 35.0% |
| !! | TGCTCCTATTTTTCTTTTCC+AGG | - | chr7.2:80207074-80207093 | MS.gene62009:CDS | 35.0% |
| !! | TTAGAAAAGGGTATCGTATG+TGG | - | chr7.2:80202866-80202885 | MS.gene62009:intron | 35.0% |
| !!! | AACTTTTGCCTGTTTTTGTC+TGG | - | chr7.2:80205828-80205847 | MS.gene62009:CDS | 35.0% |
| !!! | TGCTGTCCTTTTTTATGTGT+TGG | - | chr7.2:80203292-80203311 | MS.gene62009:intron | 35.0% |
| !!! | TGTGGATTTTGAAATGAGTG+TGG | - | chr7.2:80202382-80202401 | MS.gene62009:CDS | 35.0% |
| AAAGGCAAGACACTACTGTT+GGG | - | chr7.2:80207320-80207339 | MS.gene62009:CDS | 40.0% | |
| AACATTCATGGCATGCTTCT+AGG | - | chr7.2:80206113-80206132 | MS.gene62009:CDS | 40.0% | |
| AATACCGGTGATGTTGATGT+TGG | - | chr7.2:80202332-80202351 | MS.gene62009:CDS | 40.0% | |
| AATACTTACTCCCTTCGGTT+CGG | + | chr7.2:80206763-80206782 | None:intergenic | 40.0% | |
| AATCTCGTAAAACTGCTCCT+CGG | + | chr7.2:80202675-80202694 | None:intergenic | 40.0% | |
| ACAACAGGGAATGTTGAAGA+CGG | - | chr7.2:80203325-80203344 | MS.gene62009:intron | 40.0% | |
| ACAACTTTCAAAATGCCAGG+CGG | - | chr7.2:80204964-80204983 | MS.gene62009:intron | 40.0% | |
| ACAAGAAACTGAATGCCAGT+TGG | - | chr7.2:80203828-80203847 | MS.gene62009:intron | 40.0% | |
| ACACTTCATGCTGAGATTTC+TGG | - | chr7.2:80202596-80202615 | MS.gene62009:CDS | 40.0% | |
| ACAGAAAGGTCACAACTGAA+AGG | + | chr7.2:80207239-80207258 | None:intergenic | 40.0% | |
| ACCGAAGGGAGTAAGTATTA+TGG | - | chr7.2:80206764-80206783 | MS.gene62009:intron | 40.0% | |
| ACGAGGAAGTAAGTTTCTTG+AGG | - | chr7.2:80204298-80204317 | MS.gene62009:CDS | 40.0% | |
| ACTATCTGTCTGCATTGTAC+AGG | + | chr7.2:80206446-80206465 | None:intergenic | 40.0% | |
| ACTCTCCTATGATTCAGTTC+AGG | + | chr7.2:80206808-80206827 | None:intergenic | 40.0% | |
| ACTGTGAGAAGAATAGATGC+AGG | - | chr7.2:80207168-80207187 | MS.gene62009:CDS | 40.0% | |
| AGACTTTCACATTCACCAAC+TGG | + | chr7.2:80203846-80203865 | None:intergenic | 40.0% | |
| AGCTACTACCAGACAAAAAC+AGG | + | chr7.2:80205839-80205858 | None:intergenic | 40.0% | |
| AGGAAGAAGCAATCGAAGTT+TGG | - | chr7.2:80203557-80203576 | MS.gene62009:intron | 40.0% | |
| AGTAGATTGGAATGCTTGGA+GGG | - | chr7.2:80204321-80204340 | MS.gene62009:intron | 40.0% | |
| ATCACCAATCCATGAACTAG+TGG | + | chr7.2:80205889-80205908 | None:intergenic | 40.0% | |
| ATCACCATACTGCACTTGTA+AGG | + | chr7.2:80207425-80207444 | None:intergenic | 40.0% | |
| ATGCAGATCAATTGATACCC+TGG | + | chr7.2:80204597-80204616 | None:intergenic | 40.0% | |
| GAATCCTTACAAGTGCAGTA+TGG | - | chr7.2:80207418-80207437 | MS.gene62009:CDS | 40.0% | |
| GAGGATGCTTGAGAAATCTT+TGG | - | chr7.2:80203432-80203451 | MS.gene62009:intron | 40.0% | |
| GGAAGAAGCAATCGAAGTTT+GGG | - | chr7.2:80203558-80203577 | MS.gene62009:intron | 40.0% | |
| GGGAAATGGCATCATATGAA+AGG | - | chr7.2:80207366-80207385 | MS.gene62009:CDS | 40.0% | |
| GTGTTCTCAAGTTAGAGACA+TGG | - | chr7.2:80203900-80203919 | MS.gene62009:intron | 40.0% | |
| GTTACTTGAAAGGCAGCTAA+AGG | - | chr7.2:80204080-80204099 | MS.gene62009:intron | 40.0% | |
| TATATAGGTGAGGTGGGAAT+CGG | + | chr7.2:80205089-80205108 | None:intergenic | 40.0% | |
| TCACCAATCCATGAACTAGT+GGG | + | chr7.2:80205888-80205907 | None:intergenic | 40.0% | |
| TCGAAGTTTGATCATCCTCT+TGG | + | chr7.2:80203360-80203379 | None:intergenic | 40.0% | |
| TCTGGCCTATTACCTGTTAT+AGG | + | chr7.2:80205005-80205024 | None:intergenic | 40.0% | |
| TGTGCATATAGCATGCTATG+TGG | - | chr7.2:80206341-80206360 | MS.gene62009:CDS | 40.0% | |
| TTCCAGCTTATCTCTAAGCT+CGG | + | chr7.2:80203698-80203717 | None:intergenic | 40.0% | |
| TTCTCAAAGTAGTCATGCTC+AGG | - | chr7.2:80205038-80205057 | MS.gene62009:intron | 40.0% | |
| TTTCCCACTAGTTCATGGAT+TGG | - | chr7.2:80205882-80205901 | MS.gene62009:CDS | 40.0% | |
| ! | AAGTTTGTTCTCGCTTGCTA+AGG | + | chr7.2:80205435-80205454 | None:intergenic | 40.0% |
| ! | AGCAAGCGAGAACAAACTTT+TGG | - | chr7.2:80205436-80205455 | MS.gene62009:CDS | 40.0% |
| ! | AGGGTATCAATTGATCTGCA+TGG | - | chr7.2:80204596-80204615 | MS.gene62009:intron | 40.0% |
| ! | GCTTTGGATATGGTTTCTGT+TGG | - | chr7.2:80205802-80205821 | MS.gene62009:CDS | 40.0% |
| !! | ACATTTAGCAGTGGTTTGCT+TGG | - | chr7.2:80205277-80205296 | MS.gene62009:intron | 40.0% |
| !! | AGAAAAGGGTATCGTATGTG+GGG | - | chr7.2:80202868-80202887 | MS.gene62009:intron | 40.0% |
| !! | CGTATCAACTTTTTCTTCGC+TGG | - | chr7.2:80206229-80206248 | MS.gene62009:CDS | 40.0% |
| !! | GAGAGAGCGTCTTAATAAGA+AGG | - | chr7.2:80204443-80204462 | MS.gene62009:intron | 40.0% |
| !! | GGTTCTGAGGTTAGAGATTT+GGG | - | chr7.2:80202560-80202579 | MS.gene62009:CDS | 40.0% |
| !! | GTTGGAGGTGTTTCAGATAA+TGG | - | chr7.2:80202350-80202369 | MS.gene62009:CDS | 40.0% |
| ACCTCCAACATCAACATCAC+CGG | + | chr7.2:80202339-80202358 | None:intergenic | 45.0% | |
| AGACACTACTGTTGGGATCT+TGG | - | chr7.2:80207327-80207346 | MS.gene62009:CDS | 45.0% | |
| AGGAGGATAGCTGCAAGTAA+AGG | + | chr7.2:80205415-80205434 | None:intergenic | 45.0% | |
| AGGGGAATAGGAAGATTGTC+AGG | - | chr7.2:80204641-80204660 | MS.gene62009:intron | 45.0% | |
| AGTACTTGGCATAGAGTGCA+TGG | - | chr7.2:80206301-80206320 | MS.gene62009:CDS | 45.0% | |
| ATAACAGAGACCGAACCGAA+GGG | - | chr7.2:80206750-80206769 | MS.gene62009:intron | 45.0% | |
| ATCCGAGCTTAGAGATAAGC+TGG | - | chr7.2:80203693-80203712 | MS.gene62009:intron | 45.0% | |
| CTGCTGCTATTGTATGGCTT+TGG | - | chr7.2:80205786-80205805 | MS.gene62009:CDS | 45.0% | |
| CTTTGAACGATTGGCAAGAG+AGG | - | chr7.2:80202639-80202658 | MS.gene62009:CDS | 45.0% | |
| GAAAGGCAAGACACTACTGT+TGG | - | chr7.2:80207319-80207338 | MS.gene62009:CDS | 45.0% | |
| GACTTTGTCTTCTGAGCATG+AGG | - | chr7.2:80205511-80205530 | MS.gene62009:CDS | 45.0% | |
| GAGAATGTTAGGCTCGAATC+TGG | + | chr7.2:80205023-80205042 | None:intergenic | 45.0% | |
| GAGGAGTAGATTGGAATGCT+TGG | - | chr7.2:80204317-80204336 | MS.gene62009:CDS | 45.0% | |
| GAGTAGATTGGAATGCTTGG+AGG | - | chr7.2:80204320-80204339 | MS.gene62009:intron | 45.0% | |
| GCAATGCTGCTGCTATTGTA+TGG | - | chr7.2:80205780-80205799 | MS.gene62009:CDS | 45.0% | |
| TATAACAGAGACCGAACCGA+AGG | - | chr7.2:80206749-80206768 | MS.gene62009:intron | 45.0% | |
| TGGCACCTGAACTGAATCAT+AGG | - | chr7.2:80206800-80206819 | MS.gene62009:intron | 45.0% | |
| TGTGTCAACAAGAGGGGAAT+AGG | - | chr7.2:80204629-80204648 | MS.gene62009:intron | 45.0% | |
| ! | TTTGCTGACACAGTTGGCTT+TGG | - | chr7.2:80204419-80204438 | MS.gene62009:intron | 45.0% |
| ! | TTTGTTCTCGCTTGCTAAGG+AGG | + | chr7.2:80205432-80205451 | None:intergenic | 45.0% |
| ! | TTTTCCAGGGGAACAAGACA+TGG | - | chr7.2:80207088-80207107 | MS.gene62009:CDS | 45.0% |
| !! | GATTTGTTATGTGGGGTGCT+GGG | - | chr7.2:80202539-80202558 | MS.gene62009:CDS | 45.0% |
| !! | GGGTTCTGAGGTTAGAGATT+TGG | - | chr7.2:80202559-80202578 | MS.gene62009:CDS | 45.0% |
| !! | TGATTTGTTATGTGGGGTGC+TGG | - | chr7.2:80202538-80202557 | MS.gene62009:CDS | 45.0% |
| !! | TGGTTTGCTTGGCTGATGAT+GGG | - | chr7.2:80205288-80205307 | MS.gene62009:intron | 45.0% |
| !! | TTGGCTGATGATGGGATGTA+TGG | - | chr7.2:80205296-80205315 | MS.gene62009:intron | 45.0% |
| !! | TTTTCCATGTCTTGTTCCCC+TGG | + | chr7.2:80207095-80207114 | None:intergenic | 45.0% |
| !!! | TCCATTTTTTAAGGACCGCC+TGG | + | chr7.2:80204982-80205001 | None:intergenic | 45.0% |
| AATGCGCGTGAGATCCTGAA+GGG | - | chr7.2:80203601-80203620 | MS.gene62009:intron | 50.0% | |
| ACAGGGAATGTTGAAGACGG+TGG | - | chr7.2:80203328-80203347 | MS.gene62009:intron | 50.0% | |
| ACCGGTGATGTTGATGTTGG+AGG | - | chr7.2:80202335-80202354 | MS.gene62009:CDS | 50.0% | |
| ACTACTGTTGGGATCTTGGC+AGG | - | chr7.2:80207331-80207350 | MS.gene62009:CDS | 50.0% | |
| ACTGACCACTTGAGTGGTGT+AGG | - | chr7.2:80204909-80204928 | MS.gene62009:intron | 50.0% | |
| AGACGGTGGAAATGTCCAAG+AGG | - | chr7.2:80203342-80203361 | MS.gene62009:intron | 50.0% | |
| AGTCATGCTCAGGTCTTGCA+AGG | - | chr7.2:80205048-80205067 | MS.gene62009:intron | 50.0% | |
| CACACTACTGACCACTTGAG+TGG | - | chr7.2:80204903-80204922 | MS.gene62009:intron | 50.0% | |
| CACTCAAGTGGTCAGTAGTG+TGG | + | chr7.2:80204905-80204924 | None:intergenic | 50.0% | |
| CTACTGTTGGGATCTTGGCA+GGG | - | chr7.2:80207332-80207351 | MS.gene62009:CDS | 50.0% | |
| CTGCATTGTACAGGTGAGGA+GGG | + | chr7.2:80206437-80206456 | None:intergenic | 50.0% | |
| CTGTCTGCATTGTACAGGTG+AGG | + | chr7.2:80206441-80206460 | None:intergenic | 50.0% | |
| CTTCTCACAGTCCCAACATC+TGG | + | chr7.2:80207159-80207178 | None:intergenic | 50.0% | |
| GAAAGCCTACACCACTCAAG+TGG | + | chr7.2:80204917-80204936 | None:intergenic | 50.0% | |
| GAACGATTGGCAAGAGAGGT+TGG | - | chr7.2:80202643-80202662 | MS.gene62009:CDS | 50.0% | |
| GCATAGAGTGCATGGTTTCC+TGG | - | chr7.2:80206309-80206328 | MS.gene62009:CDS | 50.0% | |
| GCCAGGCGGTCCTTAAAAAA+TGG | - | chr7.2:80204978-80204997 | MS.gene62009:intron | 50.0% | |
| GGAAGATTGTCAGGAGCCTA+TGG | - | chr7.2:80204650-80204669 | MS.gene62009:intron | 50.0% | |
| GGGACTTGCAGAATGGGAAA+TGG | - | chr7.2:80207352-80207371 | MS.gene62009:CDS | 50.0% | |
| TCTGCATTGTACAGGTGAGG+AGG | + | chr7.2:80206438-80206457 | None:intergenic | 50.0% | |
| TGCACTGTCAGCTAGACTCT+CGG | + | chr7.2:80204235-80204254 | None:intergenic | 50.0% | |
| TTGCTTACAATCGAGACCGG+AGG | + | chr7.2:80206483-80206502 | None:intergenic | 50.0% | |
| TTGGCAGGGACTTGCAGAAT+GGG | - | chr7.2:80207346-80207365 | MS.gene62009:CDS | 50.0% | |
| TTGTCAGGAGCCTATGGTCT+AGG | - | chr7.2:80204656-80204675 | MS.gene62009:intron | 50.0% | |
| ! | AGAGAGGTTGGTTGAATCCG+AGG | - | chr7.2:80202655-80202674 | MS.gene62009:intron | 50.0% |
| ! | CAGTGTCGAGTAGTGCTCTA+TGG | + | chr7.2:80206837-80206856 | None:intergenic | 50.0% |
| ! | GACTGATTTACAGCTGCAGC+AGG | - | chr7.2:80204104-80204123 | MS.gene62009:intron | 50.0% |
| !! | GCTGATGATGGGATGTATGG+AGG | - | chr7.2:80205299-80205318 | MS.gene62009:CDS | 50.0% |
| !! | GTGGTTTGCTTGGCTGATGA+TGG | - | chr7.2:80205287-80205306 | MS.gene62009:intron | 50.0% |
| CAATGCGCGTGAGATCCTGA+AGG | - | chr7.2:80203600-80203619 | MS.gene62009:intron | 55.0% | |
| CCTATGGTCTAGGCAACGTC+AGG | - | chr7.2:80204666-80204685 | MS.gene62009:intron | 55.0% | |
| CCTGACGTTGCCTAGACCAT+AGG | + | chr7.2:80204669-80204688 | None:intergenic | 55.0% | |
| CTTGGCAGGGACTTGCAGAA+TGG | - | chr7.2:80207345-80207364 | MS.gene62009:CDS | 55.0% | |
| GAGTCTAGCTGACAGTGCAG+AGG | - | chr7.2:80204236-80204255 | MS.gene62009:CDS | 55.0% | |
| GGAGGGATCACTGCAGAAAG+CGG | - | chr7.2:80204338-80204357 | MS.gene62009:intron | 55.0% | |
| TAGGTGAGGTGGGAATCGGT+AGG | + | chr7.2:80205085-80205104 | None:intergenic | 55.0% | |
| GAGGTGGGAATCGGTAGGCT+AGG | + | chr7.2:80205080-80205099 | None:intergenic | 60.0% | |
| GGAATCGGTAGGCTAGGCTC+GGG | + | chr7.2:80205074-80205093 | None:intergenic | 60.0% | |
| GGGAATCGGTAGGCTAGGCT+CGG | + | chr7.2:80205075-80205094 | None:intergenic | 60.0% | |
| GGGATCACTGCAGAAAGCGG+AGG | - | chr7.2:80204341-80204360 | MS.gene62009:intron | 60.0% | |
| !! | ATGTGGGGTGCTGGGTTCTG+AGG | - | chr7.2:80202547-80202566 | MS.gene62009:CDS | 60.0% |
| CAGCAGGCAGTAGCGTCTGC+TGG | - | chr7.2:80204120-80204139 | MS.gene62009:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 80202308 | 80207454 | 80202308 | ID=MS.gene62009 |
| chr7.2 | mRNA | 80202308 | 80207454 | 80202308 | ID=MS.gene62009.t1;Parent=MS.gene62009 |
| chr7.2 | exon | 80207010 | 80207454 | 80207010 | ID=MS.gene62009.t1.exon1;Parent=MS.gene62009.t1 |
| chr7.2 | CDS | 80207010 | 80207454 | 80207010 | ID=cds.MS.gene62009.t1;Parent=MS.gene62009.t1 |
| chr7.2 | exon | 80205298 | 80206430 | 80205298 | ID=MS.gene62009.t1.exon2;Parent=MS.gene62009.t1 |
| chr7.2 | CDS | 80205298 | 80206430 | 80205298 | ID=cds.MS.gene62009.t1;Parent=MS.gene62009.t1 |
| chr7.2 | exon | 80204230 | 80204337 | 80204230 | ID=MS.gene62009.t1.exon3;Parent=MS.gene62009.t1 |
| chr7.2 | CDS | 80204230 | 80204337 | 80204230 | ID=cds.MS.gene62009.t1;Parent=MS.gene62009.t1 |
| chr7.2 | exon | 80202481 | 80202666 | 80202481 | ID=MS.gene62009.t1.exon4;Parent=MS.gene62009.t1 |
| chr7.2 | CDS | 80202481 | 80202666 | 80202481 | ID=cds.MS.gene62009.t1;Parent=MS.gene62009.t1 |
| chr7.2 | exon | 80202308 | 80202409 | 80202308 | ID=MS.gene62009.t1.exon5;Parent=MS.gene62009.t1 |
| chr7.2 | CDS | 80202308 | 80202409 | 80202308 | ID=cds.MS.gene62009.t1;Parent=MS.gene62009.t1 |
| Gene Sequence |
| Protein sequence |
