Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073261.t1 | XP_003618310.2 | 97.1 | 408 | 12 | 0 | 1 | 408 | 34 | 441 | 1.20E-234 | 822 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073261.t1 | Q8VZQ6 | 67.6 | 408 | 120 | 2 | 1 | 408 | 10 | 405 | 7.9e-166 | 584.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073261.t1 | G7KIT8 | 97.1 | 408 | 12 | 0 | 1 | 408 | 34 | 441 | 8.8e-235 | 822.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073261 | MS.gene069370 | PPI |
| MS.gene073261 | MS.gene059857 | PPI |
| MS.gene045143 | MS.gene073261 | PPI |
| MS.gene073261 | MS.gene75502 | PPI |
| MS.gene073261 | MS.gene84700 | PPI |
| MS.gene031394 | MS.gene073261 | PPI |
| MS.gene073261 | MS.gene79098 | PPI |
| MS.gene065179 | MS.gene073261 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073261.t1 | MTR_6g007490 | 97.059 | 408 | 12 | 0 | 1 | 408 | 34 | 441 | 0.0 | 826 |
| MS.gene073261.t1 | MTR_6g007490 | 96.644 | 298 | 10 | 0 | 1 | 298 | 34 | 331 | 0.0 | 604 |
| MS.gene073261.t1 | MTR_2g079700 | 67.717 | 381 | 122 | 1 | 28 | 408 | 38 | 417 | 0.0 | 557 |
| MS.gene073261.t1 | MTR_3g086910 | 47.059 | 391 | 185 | 8 | 33 | 408 | 32 | 415 | 8.26e-113 | 337 |
| MS.gene073261.t1 | MTR_3g086910 | 44.643 | 280 | 134 | 7 | 33 | 298 | 32 | 304 | 1.52e-69 | 222 |
| MS.gene073261.t1 | MTR_0040s0150 | 95.238 | 42 | 2 | 0 | 1 | 42 | 39 | 80 | 9.19e-22 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073261.t1 | AT2G20770 | 67.647 | 408 | 120 | 2 | 1 | 408 | 10 | 405 | 0.0 | 581 |
| MS.gene073261.t1 | AT1G52920 | 64.951 | 408 | 136 | 2 | 1 | 408 | 10 | 410 | 0.0 | 549 |
| MS.gene073261.t1 | AT5G65280 | 46.040 | 404 | 190 | 10 | 31 | 408 | 32 | 433 | 2.91e-113 | 338 |
| MS.gene073261.t1 | AT5G65280 | 47.756 | 312 | 147 | 6 | 111 | 408 | 2 | 311 | 8.29e-95 | 287 |
Find 115 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTTTACTGTGGTCTTCT+TGG | 0.210886 | 4.3:-55509021 | MS.gene073261:CDS |
| TATGAATGTTCTTATGGATA+TGG | 0.244336 | 4.3:-55506734 | MS.gene073261:CDS |
| ATGCTGCTTCTCTTTCTTCC+AGG | 0.260657 | 4.3:-55508912 | MS.gene073261:intron |
| GGTGCTGCACATGGTTTGGC+TGG | 0.263133 | 4.3:-55506760 | MS.gene073261:CDS |
| CTGATGAGCTTGAGGATGTT+AGG | 0.277367 | 4.3:-55506702 | MS.gene073261:CDS |
| TTGTGACGGTGACTGCTTCT+TGG | 0.292863 | 4.3:+55509274 | None:intergenic |
| CGTGCTGGTGTTTGTGCTCT+TGG | 0.300339 | 4.3:-55508409 | MS.gene073261:CDS |
| TGGGATTATGAATGTTCTTA+TGG | 0.319356 | 4.3:-55506740 | MS.gene073261:CDS |
| TGTTGATTCGGGTATGAATT+CGG | 0.321885 | 4.3:+55509317 | None:intergenic |
| CTTCCTGATGAGTTGCTATA+CGG | 0.322083 | 4.3:-55507069 | MS.gene073261:CDS |
| CACTGGTGCCATGGAGCTCC+TGG | 0.325907 | 4.3:-55506592 | MS.gene073261:CDS |
| ATGGAAACATGGGGCTTAAC+TGG | 0.328501 | 4.3:-55509063 | MS.gene073261:CDS |
| CTGTCACTTTACCAACTTAC+CGG | 0.336129 | 4.3:-55505914 | MS.gene073261:CDS |
| TGGAGTTCCTGTTGGGTTGA+AGG | 0.353026 | 4.3:+55509294 | None:intergenic |
| TGCTTCTTGGAGTTCCTGTT+GGG | 0.363023 | 4.3:+55509287 | None:intergenic |
| CTGCTTCTTGGAGTTCCTGT+TGG | 0.363703 | 4.3:+55509286 | None:intergenic |
| GAACTGACTCACAGTATAAC+TGG | 0.376065 | 4.3:+55506981 | None:intergenic |
| TAGAAGCAGGAGAGGTGGTT+TGG | 0.380310 | 4.3:-55506000 | MS.gene073261:CDS |
| AGAGCTCATAATCTGATATC+TGG | 0.389620 | 4.3:-55505839 | MS.gene073261:CDS |
| GTTGATTCGGGTATGAATTC+GGG | 0.392509 | 4.3:+55509318 | None:intergenic |
| GTGCTGCACATGGTTTGGCT+GGG | 0.394027 | 4.3:-55506759 | MS.gene073261:CDS |
| CTAACATCCTCAAGCTCATC+AGG | 0.402562 | 4.3:+55506703 | None:intergenic |
| CTTAAACAACCACCTTGGTC+AGG | 0.412022 | 4.3:-55507016 | MS.gene073261:CDS |
| GTATAAATACTTCGTGTTCC+CGG | 0.412099 | 4.3:+55505895 | None:intergenic |
| TTGGGTTGAAGGTGTTGATT+CGG | 0.421183 | 4.3:+55509305 | None:intergenic |
| AGTGGTACGGAGAGAAGTAT+TGG | 0.422897 | 4.3:-55506783 | MS.gene073261:CDS |
| TTGGGGTGCTGCACATGGTT+TGG | 0.427752 | 4.3:-55506764 | MS.gene073261:CDS |
| GTGGTACGGAGAGAAGTATT+GGG | 0.428107 | 4.3:-55506782 | MS.gene073261:CDS |
| TGGGTTGAAGGTGTTGATTC+GGG | 0.429203 | 4.3:+55509306 | None:intergenic |
| CTACTCCTTCAAACAGTGAA+TGG | 0.433884 | 4.3:+55505789 | None:intergenic |
| GAAGCAGTCACCGTCACAAC+GGG | 0.452280 | 4.3:-55509270 | MS.gene073261:CDS |
| TGATGAGCTTGAGGATGTTA+GGG | 0.452334 | 4.3:-55506701 | MS.gene073261:CDS |
| ATAAAGAATGGTAGGACATT+GGG | 0.457173 | 4.3:-55506835 | MS.gene073261:CDS |
| ATCAACACCTTCAACCCAAC+AGG | 0.457726 | 4.3:-55509301 | MS.gene073261:CDS |
| TACTCCTTCAAACAGTGAAT+GGG | 0.459968 | 4.3:+55505790 | None:intergenic |
| TAAGAAGCATGCAAAAGCTT+TGG | 0.465503 | 4.3:+55505868 | None:intergenic |
| ACAAGTGTGAGAGCCATTCC+AGG | 0.465693 | 4.3:+55506574 | None:intergenic |
| AATAGGGTACAGTTTCTTTG+AGG | 0.466133 | 4.3:+55509172 | None:intergenic |
| GAGGCATGGCGAGGAGGTTG+AGG | 0.470761 | 4.3:+55509235 | None:intergenic |
| CGAGTCCTTGAGATACTACT+TGG | 0.473938 | 4.3:-55508356 | MS.gene073261:CDS |
| CTACTTGGCTCAGTTCCAAC+AGG | 0.485928 | 4.3:-55508341 | MS.gene073261:intron |
| AACTCATCAGGAAGATCCTT+CGG | 0.492272 | 4.3:+55507078 | None:intergenic |
| CGGTAAGTTGGTAAAGTGAC+AGG | 0.492495 | 4.3:+55505915 | None:intergenic |
| GTGCCATGGAGCTCCTGGAA+TGG | 0.496830 | 4.3:-55506587 | MS.gene073261:CDS |
| TATTCTCATAGTTCATAAGC+AGG | 0.498619 | 4.3:+55505713 | None:intergenic |
| ACTTCGTGTTCCCGGTAAGT+TGG | 0.500841 | 4.3:+55505903 | None:intergenic |
| TCGGGTATGAATTCGGGCAT+GGG | 0.510233 | 4.3:+55509324 | None:intergenic |
| AGAGCAAAGTGCTAGATCAT+TGG | 0.512633 | 4.3:+55508954 | None:intergenic |
| TATAAAGAATGGTAGGACAT+TGG | 0.513391 | 4.3:-55506836 | MS.gene073261:CDS |
| CGCGGTTTGCTCAAGCGAGT+TGG | 0.514210 | 4.3:-55505974 | MS.gene073261:CDS |
| TTCCTGATGAGTTGCTATAC+GGG | 0.519020 | 4.3:-55507068 | MS.gene073261:CDS |
| TTCAGATAGTGATGGAAACA+TGG | 0.519427 | 4.3:-55509074 | MS.gene073261:intron |
| GGAGAGGTGGTTTGGAGTCG+CGG | 0.523187 | 4.3:-55505992 | MS.gene073261:CDS |
| CTCCCGTATAGCAACTCATC+AGG | 0.523680 | 4.3:+55507066 | None:intergenic |
| GTGGATGAGATTATAAAGAA+TGG | 0.527571 | 4.3:-55506847 | MS.gene073261:CDS |
| TATAATCTCATCCACTACCT+TGG | 0.530074 | 4.3:+55506855 | None:intergenic |
| TTCGGGTATGAATTCGGGCA+TGG | 0.532189 | 4.3:+55509323 | None:intergenic |
| CAAGAGCACAAACACCAGCA+CGG | 0.533701 | 4.3:+55508410 | None:intergenic |
| AGACCCCATTCACTGTTTGA+AGG | 0.537996 | 4.3:-55505794 | MS.gene073261:CDS |
| ATGCATTCCCACTGATACCA+TGG | 0.541610 | 4.3:+55505945 | None:intergenic |
| GTTCTTGTGCACTGGTGCCA+TGG | 0.544555 | 4.3:-55506601 | MS.gene073261:CDS |
| TGAGTCACCGCCCGTTGTGA+CGG | 0.546187 | 4.3:+55509260 | None:intergenic |
| TTGGATGCAGCTATAGAAGC+AGG | 0.547462 | 4.3:-55506013 | MS.gene073261:CDS |
| TGTTTGTGCTCTTGGTGCTG+TGG | 0.555848 | 4.3:-55508401 | MS.gene073261:CDS |
| TGCAGCTATAGAAGCAGGAG+AGG | 0.561227 | 4.3:-55506008 | MS.gene073261:CDS |
| TGTCACTTTACCAACTTACC+GGG | 0.562638 | 4.3:-55505913 | MS.gene073261:CDS |
| CGCTCAAAGAGTGGAGCATG+AGG | 0.566052 | 4.3:+55509216 | None:intergenic |
| AAGTATTGGGGTGCTGCACA+TGG | 0.571615 | 4.3:-55506769 | MS.gene073261:CDS |
| AAGCGAGTTGGTATTTGCCA+TGG | 0.571844 | 4.3:-55505962 | MS.gene073261:CDS |
| CCTTTGATGTTTGAGTGGTA+CGG | 0.572324 | 4.3:-55506796 | MS.gene073261:CDS |
| CACACTTGTCAAAGCAGCTA+AGG | 0.574554 | 4.3:-55506560 | MS.gene073261:intron |
| ATGAGATTATAAAGAATGGT+AGG | 0.574756 | 4.3:-55506843 | MS.gene073261:CDS |
| AGCTATAGAAGCAGGAGAGG+TGG | 0.576263 | 4.3:-55506005 | MS.gene073261:CDS |
| GCAGGGAATTTAGACTGTGA+AGG | 0.577883 | 4.3:+55505731 | None:intergenic |
| TTAAACAACCACCTTGGTCA+GGG | 0.582107 | 4.3:-55507015 | MS.gene073261:CDS |
| CTCGCAGGATAGTTTCCACT+AGG | 0.583639 | 4.3:+55506646 | None:intergenic |
| CATTGGTATTGCAAGTGACA+TGG | 0.586333 | 4.3:+55508971 | None:intergenic |
| CATTCACTGTTTGAAGGAGT+AGG | 0.587261 | 4.3:-55505788 | MS.gene073261:CDS |
| TTGTTTGTTTCAGATAGTGA+TGG | 0.589398 | 4.3:-55509082 | MS.gene073261:intron |
| GTATTTGCCATGGTATCAGT+GGG | 0.589447 | 4.3:-55505952 | MS.gene073261:CDS |
| TCACTGTTTGAAGGAGTAGG+AGG | 0.589488 | 4.3:-55505785 | MS.gene073261:CDS |
| GGTATTTGCCATGGTATCAG+TGG | 0.592432 | 4.3:-55505953 | MS.gene073261:CDS |
| TCAGATAGTGATGGAAACAT+GGG | 0.593329 | 4.3:-55509073 | MS.gene073261:intron |
| CGTTTGAGACGCTCAAAGAG+TGG | 0.593367 | 4.3:+55509207 | None:intergenic |
| ATACATAACCGCTTTCCTAG+TGG | 0.597661 | 4.3:-55506661 | MS.gene073261:CDS |
| GAGTTGCTATACGGGAGAGG+TGG | 0.605255 | 4.3:-55507060 | MS.gene073261:CDS |
| CCGTACCACTCAAACATCAA+AGG | 0.606044 | 4.3:+55506796 | None:intergenic |
| GAGCCATTCCAGGAGCTCCA+TGG | 0.608796 | 4.3:+55506584 | None:intergenic |
| AAAGAGTGGAGCATGAGGCA+TGG | 0.609365 | 4.3:+55509221 | None:intergenic |
| AATGTCCTTTGATGTTTGAG+TGG | 0.609506 | 4.3:-55506801 | MS.gene073261:CDS |
| CTGAGCCAAGTAGTATCTCA+AGG | 0.612427 | 4.3:+55508351 | None:intergenic |
| GATGAGTTGCTATACGGGAG+AGG | 0.614709 | 4.3:-55507063 | MS.gene073261:CDS |
| GTGGAGCATGAGGCATGGCG+AGG | 0.625084 | 4.3:+55509226 | None:intergenic |
| GATAGTTTCCACTAGGAAAG+CGG | 0.626371 | 4.3:+55506653 | None:intergenic |
| TGACTCACAGTATAACTGGA+AGG | 0.627783 | 4.3:+55506985 | None:intergenic |
| AGAGCGATGTTCTTGTGCAC+TGG | 0.628574 | 4.3:-55506609 | MS.gene073261:CDS |
| GAGCATGAGGCATGGCGAGG+AGG | 0.629695 | 4.3:+55509229 | None:intergenic |
| GGTGACTTCACTCTTTACTG+TGG | 0.631242 | 4.3:-55509030 | MS.gene073261:CDS |
| GTTTGAAGGAGTAGGAGGCA+TGG | 0.631540 | 4.3:-55505780 | MS.gene073261:CDS |
| ATATCTGGAGGTGAAATGCA+TGG | 0.634490 | 4.3:-55505824 | MS.gene073261:CDS |
| AGAAGCAGTCACCGTCACAA+CGG | 0.634571 | 4.3:-55509271 | MS.gene073261:CDS |
| GCAGTCACCGTCACAACGGG+CGG | 0.635258 | 4.3:-55509267 | MS.gene073261:CDS |
| AAGGAACTGTTCCCTGACCA+AGG | 0.641537 | 4.3:+55507004 | None:intergenic |
| ATTGAAGCCTGATGAGCTTG+AGG | 0.641987 | 4.3:-55506710 | MS.gene073261:CDS |
| GCTCATAATCTGATATCTGG+AGG | 0.642342 | 4.3:-55505836 | MS.gene073261:CDS |
| TTGTTCTTAAACAACCACCT+TGG | 0.646226 | 4.3:-55507021 | MS.gene073261:CDS |
| ATTCTCATAGTTCATAAGCA+GGG | 0.648421 | 4.3:+55505714 | None:intergenic |
| GGCTTAACTGGACAACGTGT+TGG | 0.653032 | 4.3:-55509051 | MS.gene073261:CDS |
| TGGTACGGAGAGAAGTATTG+GGG | 0.653870 | 4.3:-55506781 | MS.gene073261:CDS |
| ACTCCTTCAAACAGTGAATG+GGG | 0.660012 | 4.3:+55505791 | None:intergenic |
| GATGTAGATTAAGCTACCGA+AGG | 0.665710 | 4.3:-55507094 | MS.gene073261:intron |
| CAGATAGTGATGGAAACATG+GGG | 0.685808 | 4.3:-55509072 | MS.gene073261:CDS |
| GATGAGCTTGAGGATGTTAG+GGG | 0.695654 | 4.3:-55506700 | MS.gene073261:CDS |
| GAACTGTTCCCTGACCAAGG+TGG | 0.796336 | 4.3:+55507007 | None:intergenic |
| TCTGGAGGTGAAATGCATGG+AGG | 0.807069 | 4.3:-55505821 | MS.gene073261:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTTTTTAAATATGAAA+TGG | - | chr4.3:55506336-55506355 | MS.gene073261:intron | 10.0% |
| !! | ATAAATCATCAATAATGAAA+CGG | + | chr4.3:55508643-55508662 | None:intergenic | 15.0% |
| !!! | AATTTTTTCAATTAAGATCA+CGG | - | chr4.3:55506388-55506407 | MS.gene073261:intron | 15.0% |
| !!! | CTATATAGGTTTTTTAAAAA+AGG | + | chr4.3:55508919-55508938 | None:intergenic | 15.0% |
| !!! | CTTTTTTAAAAAACCTATAT+AGG | - | chr4.3:55508917-55508936 | MS.gene073261:CDS | 15.0% |
| !!! | TTCATTATTGATGATTTATT+AGG | - | chr4.3:55508644-55508663 | MS.gene073261:intron | 15.0% |
| !! | AACCTATAAACAGTTTATAT+CGG | - | chr4.3:55506213-55506232 | MS.gene073261:intron | 20.0% |
| !! | TATGGGTAGAAATTTAATTA+GGG | - | chr4.3:55507822-55507841 | MS.gene073261:intron | 20.0% |
| !! | TTAGAAAAACATGTTATCAA+TGG | + | chr4.3:55508526-55508545 | None:intergenic | 20.0% |
| !! | TTATGGGTAGAAATTTAATT+AGG | - | chr4.3:55507821-55507840 | MS.gene073261:intron | 20.0% |
| !!! | ACTTTTTAGACTTATTTGTT+TGG | - | chr4.3:55507459-55507478 | MS.gene073261:intron | 20.0% |
| !!! | AGGTTTTTTAAAAAAGGTTT+TGG | + | chr4.3:55508913-55508932 | None:intergenic | 20.0% |
| !!! | AGTTTTGAACTTTGAAATAT+TGG | - | chr4.3:55506578-55506597 | MS.gene073261:CDS | 20.0% |
| !!! | GGTTTTTTAAAAAAGGTTTT+GGG | + | chr4.3:55508912-55508931 | None:intergenic | 20.0% |
| ! | AACAAAGATGATTCCTATAT+AGG | + | chr4.3:55508933-55508952 | None:intergenic | 25.0% |
| ! | AGAAGATGATATGATGAATA+GGG | + | chr4.3:55505886-55505905 | None:intergenic | 25.0% |
| ! | AGTGTAGTAAAATAATCTTG+AGG | - | chr4.3:55508880-55508899 | MS.gene073261:intron | 25.0% |
| ! | ATATATAAGATGGAAACACT+GGG | - | chr4.3:55507017-55507036 | MS.gene073261:CDS | 25.0% |
| ! | ATCCGATATAAACTGTTTAT+AGG | + | chr4.3:55506218-55506237 | None:intergenic | 25.0% |
| ! | ATGAGATTATAAAGAATGGT+AGG | - | chr4.3:55508196-55508215 | MS.gene073261:intron | 25.0% |
| ! | CAAAGTTCAAAACTACTTTA+CGG | + | chr4.3:55506572-55506591 | None:intergenic | 25.0% |
| ! | CATGAGAAAAAAATGTTTAG+AGG | + | chr4.3:55508681-55508700 | None:intergenic | 25.0% |
| ! | CTTCTTATACTATTAGGATT+GGG | - | chr4.3:55507643-55507662 | MS.gene073261:intron | 25.0% |
| ! | GCTAGTCAAAATAAGTTATA+TGG | - | chr4.3:55506448-55506467 | MS.gene073261:intron | 25.0% |
| ! | GGTAAATAGAAATGATTAGT+TGG | + | chr4.3:55507904-55507923 | None:intergenic | 25.0% |
| ! | TATATATAAGATGGAAACAC+TGG | - | chr4.3:55507016-55507035 | MS.gene073261:CDS | 25.0% |
| ! | TATGAATGTTCTTATGGATA+TGG | - | chr4.3:55508305-55508324 | MS.gene073261:intron | 25.0% |
| ! | TGTGAATGGTATATATAAGA+TGG | - | chr4.3:55507007-55507026 | MS.gene073261:CDS | 25.0% |
| ! | TTTGTGCTTCTTATACTATT+AGG | - | chr4.3:55507637-55507656 | MS.gene073261:intron | 25.0% |
| !! | AGTCTTTAAATTTTGTGCAA+GGG | - | chr4.3:55506820-55506839 | MS.gene073261:CDS | 25.0% |
| !! | TAGTCTTTAAATTTTGTGCA+AGG | - | chr4.3:55506819-55506838 | MS.gene073261:CDS | 25.0% |
| !!! | AAAACGTACATTTTGACAAA+GGG | + | chr4.3:55508101-55508120 | None:intergenic | 25.0% |
| !!! | GTATTTCTGAATTTGTTTTC+AGG | - | chr4.3:55508161-55508180 | MS.gene073261:intron | 25.0% |
| !!! | TTATTTTGACTAGCTTAGAA+CGG | + | chr4.3:55506442-55506461 | None:intergenic | 25.0% |
| !!! | TTTTGGAGATAAAGAATTCT+TGG | - | chr4.3:55509007-55509026 | MS.gene073261:CDS | 25.0% |
| AAATTATACCACCCAACTAT+TGG | + | chr4.3:55507290-55507309 | None:intergenic | 30.0% | |
| AAATTGCGAAGGATCAAAAT+GGG | - | chr4.3:55507431-55507450 | MS.gene073261:intron | 30.0% | |
| AATACTAGAAATGCATGAGA+TGG | + | chr4.3:55508731-55508750 | None:intergenic | 30.0% | |
| ACAAACAAGTGGTAAATGAA+AGG | + | chr4.3:55508961-55508980 | None:intergenic | 30.0% | |
| ATAAAGAATGGTAGGACATT+GGG | - | chr4.3:55508204-55508223 | MS.gene073261:intron | 30.0% | |
| ATAAGCAGTAAACTCAACAA+TGG | - | chr4.3:55506530-55506549 | MS.gene073261:intron | 30.0% | |
| CAAACAAGTGGTAAATGAAA+GGG | + | chr4.3:55508960-55508979 | None:intergenic | 30.0% | |
| CAAAGGGAAAAATAAAGACT+TGG | + | chr4.3:55508085-55508104 | None:intergenic | 30.0% | |
| CTACTTTCAATATCTTGTCT+GGG | - | chr4.3:55507606-55507625 | MS.gene073261:intron | 30.0% | |
| GAGAAGATGATATGATGAAT+AGG | + | chr4.3:55505887-55505906 | None:intergenic | 30.0% | |
| GATAAAATCTCCACATAATC+TGG | - | chr4.3:55508546-55508565 | MS.gene073261:intron | 30.0% | |
| GCTTCTTATACTATTAGGAT+TGG | - | chr4.3:55507642-55507661 | MS.gene073261:intron | 30.0% | |
| GGTAAACTATTGTTATGATC+TGG | + | chr4.3:55507883-55507902 | None:intergenic | 30.0% | |
| GTAATTGAATGTAATCGTGT+TGG | + | chr4.3:55507551-55507570 | None:intergenic | 30.0% | |
| GTCCCTAGATGAAAATATAA+GGG | - | chr4.3:55506865-55506884 | MS.gene073261:intron | 30.0% | |
| GTGGATGAGATTATAAAGAA+TGG | - | chr4.3:55508192-55508211 | MS.gene073261:intron | 30.0% | |
| GTTGTGTTCGATAAAATTAG+CGG | - | chr4.3:55506309-55506328 | MS.gene073261:intron | 30.0% | |
| TACCACTTGTTTGTAACTTT+AGG | - | chr4.3:55508967-55508986 | MS.gene073261:CDS | 30.0% | |
| TATAAAGAATGGTAGGACAT+TGG | - | chr4.3:55508203-55508222 | MS.gene073261:intron | 30.0% | |
| TCTACTTTCAATATCTTGTC+TGG | - | chr4.3:55507605-55507624 | MS.gene073261:intron | 30.0% | |
| TGACTAAAAAAAGACTCGTT+TGG | + | chr4.3:55506494-55506513 | None:intergenic | 30.0% | |
| TGGGATTATGAATGTTCTTA+TGG | - | chr4.3:55508299-55508318 | MS.gene073261:intron | 30.0% | |
| TGTCCCTAGATGAAAATATA+AGG | - | chr4.3:55506864-55506883 | MS.gene073261:intron | 30.0% | |
| TTATGCGCAATATCAAGAAT+TGG | + | chr4.3:55508810-55508829 | None:intergenic | 30.0% | |
| TTCCTAAAGTTACAAACAAG+TGG | + | chr4.3:55508972-55508991 | None:intergenic | 30.0% | |
| TTGTCATACAAATAGCATCA+AGG | - | chr4.3:55508756-55508775 | MS.gene073261:intron | 30.0% | |
| TTGTTTGTTTCAGATAGTGA+TGG | - | chr4.3:55505957-55505976 | MS.gene073261:CDS | 30.0% | |
| ! | AAAAACAATCCTCAGGTTTT+TGG | - | chr4.3:55508990-55509009 | MS.gene073261:CDS | 30.0% |
| ! | AGTCCCTTATATTTTCATCT+AGG | + | chr4.3:55506871-55506890 | None:intergenic | 30.0% |
| ! | ATGTACGTTTTGCATTGAAT+TGG | - | chr4.3:55508110-55508129 | MS.gene073261:intron | 30.0% |
| ! | GGAACAAGGTTTTTAAATCA+TGG | - | chr4.3:55508777-55508796 | MS.gene073261:intron | 30.0% |
| ! | GTCCCTTATATTTTCATCTA+GGG | + | chr4.3:55506870-55506889 | None:intergenic | 30.0% |
| ! | GTCTTTAAATTTTGTGCAAG+GGG | - | chr4.3:55506821-55506840 | MS.gene073261:CDS | 30.0% |
| ! | GTTGATAAGCTAGCTTATAA+CGG | - | chr4.3:55506258-55506277 | MS.gene073261:intron | 30.0% |
| ! | TGTACGTTTTGCATTGAATT+GGG | - | chr4.3:55508111-55508130 | MS.gene073261:intron | 30.0% |
| !! | ACTTTGAAATATTGGTTTGC+AGG | - | chr4.3:55506586-55506605 | MS.gene073261:CDS | 30.0% |
| !! | CAAAACGTACATTTTGACAA+AGG | + | chr4.3:55508102-55508121 | None:intergenic | 30.0% |
| !! | CTTCATTGCATTTGTTGTTT+AGG | - | chr4.3:55508599-55508618 | MS.gene073261:intron | 30.0% |
| !! | CTTTGAAATATTGGTTTGCA+GGG | - | chr4.3:55506587-55506606 | MS.gene073261:CDS | 30.0% |
| AACCAAATAGAGACACAACA+CGG | + | chr4.3:55506178-55506197 | None:intergenic | 35.0% | |
| AATAGGGTACAGTTTCTTTG+AGG | + | chr4.3:55505870-55505889 | None:intergenic | 35.0% | |
| AATGTCCTTTGATGTTTGAG+TGG | - | chr4.3:55508238-55508257 | MS.gene073261:intron | 35.0% | |
| ACAAATAGCATCAAGGAACA+AGG | - | chr4.3:55508763-55508782 | MS.gene073261:intron | 35.0% | |
| AGAGCTCATAATCTGATATC+TGG | - | chr4.3:55509200-55509219 | MS.gene073261:CDS | 35.0% | |
| AGTCAAATTGCAATACCTGT+TGG | + | chr4.3:55506716-55506735 | None:intergenic | 35.0% | |
| ATCTACATCCCACAACAATA+AGG | + | chr4.3:55507934-55507953 | None:intergenic | 35.0% | |
| GAAATTGCGAAGGATCAAAA+TGG | - | chr4.3:55507430-55507449 | MS.gene073261:intron | 35.0% | |
| GGATAACTCTAGTGGTTTAT+GGG | - | chr4.3:55507805-55507824 | MS.gene073261:intron | 35.0% | |
| GTAAAATAATCTTGAGGCCA+AGG | - | chr4.3:55508886-55508905 | MS.gene073261:intron | 35.0% | |
| GTATAAATACTTCGTGTTCC+CGG | + | chr4.3:55509147-55509166 | None:intergenic | 35.0% | |
| TACTCCTTCAAACAGTGAAT+GGG | + | chr4.3:55509252-55509271 | None:intergenic | 35.0% | |
| TATAATCTCATCCACTACCT+TGG | + | chr4.3:55508187-55508206 | None:intergenic | 35.0% | |
| TATGCAAGGAAAGTAAACTG+TGG | - | chr4.3:55507366-55507385 | MS.gene073261:intron | 35.0% | |
| TATGTAATTGAAATCACCCC+AGG | - | chr4.3:55507855-55507874 | MS.gene073261:intron | 35.0% | |
| TATGTAGACTGAAAGTCACA+TGG | - | chr4.3:55507498-55507517 | MS.gene073261:intron | 35.0% | |
| TCTTTATCTCCAAAAACCTG+AGG | + | chr4.3:55509002-55509021 | None:intergenic | 35.0% | |
| TGGATAACTCTAGTGGTTTA+TGG | - | chr4.3:55507804-55507823 | MS.gene073261:intron | 35.0% | |
| TTATTGTCCCGGATTGAATT+GGG | - | chr4.3:55507400-55507419 | MS.gene073261:intron | 35.0% | |
| TTGTTCTTAAACAACCACCT+TGG | - | chr4.3:55508018-55508037 | MS.gene073261:intron | 35.0% | |
| ! | ATTGTTATGATCTGGTTCCT+GGG | + | chr4.3:55507875-55507894 | None:intergenic | 35.0% |
| ! | CTTTAGGAAAAACAATCCTC+AGG | - | chr4.3:55508983-55509002 | MS.gene073261:CDS | 35.0% |
| ! | GTTTTCTATCTGACATGTGT+TGG | - | chr4.3:55507522-55507541 | MS.gene073261:intron | 35.0% |
| ! | TAAGAAGCATGCAAAAGCTT+TGG | + | chr4.3:55509174-55509193 | None:intergenic | 35.0% |
| ! | TATTGTTATGATCTGGTTCC+TGG | + | chr4.3:55507876-55507895 | None:intergenic | 35.0% |
| ! | TCAGATAGTGATGGAAACAT+GGG | - | chr4.3:55505966-55505985 | MS.gene073261:CDS | 35.0% |
| ! | TTCAGATAGTGATGGAAACA+TGG | - | chr4.3:55505965-55505984 | MS.gene073261:CDS | 35.0% |
| !! | AACTACTTTACGGTCTTGTT+TGG | + | chr4.3:55506562-55506581 | None:intergenic | 35.0% |
| !! | AGGGATGTGACTTTTATTTG+TGG | - | chr4.3:55506606-55506625 | MS.gene073261:CDS | 35.0% |
| !! | CAACTAAGCCTTATTGTTGT+GGG | - | chr4.3:55507923-55507942 | MS.gene073261:intron | 35.0% |
| !! | CATTGCATTTGTTGTTTAGG+TGG | - | chr4.3:55508602-55508621 | MS.gene073261:intron | 35.0% |
| !! | TGTTGATTCGGGTATGAATT+CGG | + | chr4.3:55505725-55505744 | None:intergenic | 35.0% |
| !! | TTCTTATCTTTTTCACTCGC+AGG | + | chr4.3:55508411-55508430 | None:intergenic | 35.0% |
| !!! | TTAAAAAAGGTTTTGGGCCT+TGG | + | chr4.3:55508906-55508925 | None:intergenic | 35.0% |
| !!! | TTTTCTAGAGTCAGAGTGAT+GGG | - | chr4.3:55506951-55506970 | MS.gene073261:intron | 35.0% |
| AAAGACTGTATTGAGCTGCA+AGG | + | chr4.3:55506778-55506797 | None:intergenic | 40.0% | |
| AAATAAGCCACATTTGACCG+TGG | + | chr4.3:55508833-55508852 | None:intergenic | 40.0% | |
| AACTCATCAGGAAGATCCTT+CGG | + | chr4.3:55507964-55507983 | None:intergenic | 40.0% | |
| ACGGTCAAATGTGGCTTATT+TGG | - | chr4.3:55508832-55508851 | MS.gene073261:intron | 40.0% | |
| ACGGTTATGGATAACTCTAG+TGG | - | chr4.3:55507797-55507816 | MS.gene073261:intron | 40.0% | |
| ACTCCTTCAAACAGTGAATG+GGG | + | chr4.3:55509251-55509270 | None:intergenic | 40.0% | |
| ACTCTTTACTGTGGTCTTCT+TGG | - | chr4.3:55506018-55506037 | MS.gene073261:CDS | 40.0% | |
| ATACATAACCGCTTTCCTAG+TGG | - | chr4.3:55508378-55508397 | MS.gene073261:CDS | 40.0% | |
| ATATCTGGAGGTGAAATGCA+TGG | - | chr4.3:55509215-55509234 | MS.gene073261:CDS | 40.0% | |
| CAAAACACAGTGAATGAACC+TGG | + | chr4.3:55506148-55506167 | None:intergenic | 40.0% | |
| CATTCACTGTTTGAAGGAGT+AGG | - | chr4.3:55509251-55509270 | MS.gene073261:CDS | 40.0% | |
| CATTGGTATTGCAAGTGACA+TGG | + | chr4.3:55506071-55506090 | None:intergenic | 40.0% | |
| CCACAACAATAAGGCTTAGT+TGG | + | chr4.3:55507925-55507944 | None:intergenic | 40.0% | |
| CCTTTGATGTTTGAGTGGTA+CGG | - | chr4.3:55508243-55508262 | MS.gene073261:intron | 40.0% | |
| CGGTACATTACTTATTGTCC+CGG | - | chr4.3:55507389-55507408 | MS.gene073261:intron | 40.0% | |
| CTAAATTGTGCTCTCAATCG+TGG | - | chr4.3:55508856-55508875 | MS.gene073261:intron | 40.0% | |
| CTACTCCTTCAAACAGTGAA+TGG | + | chr4.3:55509253-55509272 | None:intergenic | 40.0% | |
| CTTATTGTCCCGGATTGAAT+TGG | - | chr4.3:55507399-55507418 | MS.gene073261:intron | 40.0% | |
| CTTCCTGATGAGTTGCTATA+CGG | - | chr4.3:55507970-55507989 | MS.gene073261:intron | 40.0% | |
| CTTGATATTGCGCATAACCA+CGG | - | chr4.3:55508813-55508832 | MS.gene073261:intron | 40.0% | |
| GATAGTTTCCACTAGGAAAG+CGG | + | chr4.3:55508389-55508408 | None:intergenic | 40.0% | |
| GATGTAGATTAAGCTACCGA+AGG | - | chr4.3:55507945-55507964 | MS.gene073261:intron | 40.0% | |
| GCTCATAATCTGATATCTGG+AGG | - | chr4.3:55509203-55509222 | MS.gene073261:CDS | 40.0% | |
| GTATTTGCCATGGTATCAGT+GGG | - | chr4.3:55509087-55509106 | MS.gene073261:intron | 40.0% | |
| TACCGTGTTGTGTCTCTATT+TGG | - | chr4.3:55506173-55506192 | MS.gene073261:intron | 40.0% | |
| TGACTCACAGTATAACTGGA+AGG | + | chr4.3:55508057-55508076 | None:intergenic | 40.0% | |
| TGATGAGCTTGAGGATGTTA+GGG | - | chr4.3:55508338-55508357 | MS.gene073261:intron | 40.0% | |
| TTAAACAACCACCTTGGTCA+GGG | - | chr4.3:55508024-55508043 | MS.gene073261:intron | 40.0% | |
| TTCCTGATGAGTTGCTATAC+GGG | - | chr4.3:55507971-55507990 | MS.gene073261:intron | 40.0% | |
| ! | AGAGCAAAGTGCTAGATCAT+TGG | + | chr4.3:55506088-55506107 | None:intergenic | 40.0% |
| ! | AGGCATGGCTTATCTCTTTT+TGG | - | chr4.3:55509274-55509293 | MS.gene073261:CDS | 40.0% |
| ! | CAGATAGTGATGGAAACATG+GGG | - | chr4.3:55505967-55505986 | MS.gene073261:CDS | 40.0% |
| ! | GAACTGACTCACAGTATAAC+TGG | + | chr4.3:55508061-55508080 | None:intergenic | 40.0% |
| ! | GACATAAATCACTGACTGCA+TGG | + | chr4.3:55507697-55507716 | None:intergenic | 40.0% |
| ! | GGCTTATCTCTTTTTGGACA+TGG | - | chr4.3:55509280-55509299 | MS.gene073261:CDS | 40.0% |
| ! | TTGTTATGATCTGGTTCCTG+GGG | + | chr4.3:55507874-55507893 | None:intergenic | 40.0% |
| !! | AAAGACTTGTTAGACGTGTG+TGG | + | chr4.3:55505925-55505944 | None:intergenic | 40.0% |
| !! | CCAACTAAGCCTTATTGTTG+TGG | - | chr4.3:55507922-55507941 | MS.gene073261:intron | 40.0% |
| !! | CTGAATTTGTTTTCAGGCCA+AGG | - | chr4.3:55508167-55508186 | MS.gene073261:intron | 40.0% |
| !! | CTGTCACTTTACCAACTTAC+CGG | - | chr4.3:55509125-55509144 | MS.gene073261:intron | 40.0% |
| !! | GTTGATTCGGGTATGAATTC+GGG | + | chr4.3:55505724-55505743 | None:intergenic | 40.0% |
| !! | TGTCACTTTACCAACTTACC+GGG | - | chr4.3:55509126-55509145 | MS.gene073261:intron | 40.0% |
| !! | TTGGGTTGAAGGTGTTGATT+CGG | + | chr4.3:55505737-55505756 | None:intergenic | 40.0% |
| !!! | CTTTTCTAGAGTCAGAGTGA+TGG | - | chr4.3:55506950-55506969 | MS.gene073261:intron | 40.0% |
| AAACTCACATGGACCCGATA+GGG | + | chr4.3:55507216-55507235 | None:intergenic | 45.0% | |
| AAGAGTCAAGGAGAAAAGGG+CGG | + | chr4.3:55507093-55507112 | None:intergenic | 45.0% | |
| AGACCCCATTCACTGTTTGA+AGG | - | chr4.3:55509245-55509264 | MS.gene073261:CDS | 45.0% | |
| ATCAACACCTTCAACCCAAC+AGG | - | chr4.3:55505738-55505757 | MS.gene073261:CDS | 45.0% | |
| ATGCATTCCCACTGATACCA+TGG | + | chr4.3:55509097-55509116 | None:intergenic | 45.0% | |
| ATGGAAACACTGGGAGAAGT+CGG | - | chr4.3:55507026-55507045 | MS.gene073261:CDS | 45.0% | |
| ATGGAAACATGGGGCTTAAC+TGG | - | chr4.3:55505976-55505995 | MS.gene073261:CDS | 45.0% | |
| ATTGAAGCCTGATGAGCTTG+AGG | - | chr4.3:55508329-55508348 | MS.gene073261:intron | 45.0% | |
| CACACTTGTCAAAGCAGCTA+AGG | - | chr4.3:55508479-55508498 | MS.gene073261:intron | 45.0% | |
| CATAACCGTGCGATCAAGTT+CGG | + | chr4.3:55507786-55507805 | None:intergenic | 45.0% | |
| CCGTACCACTCAAACATCAA+AGG | + | chr4.3:55508246-55508265 | None:intergenic | 45.0% | |
| CGAGTCCTTGAGATACTACT+TGG | - | chr4.3:55506683-55506702 | MS.gene073261:CDS | 45.0% | |
| CTAACATCCTCAAGCTCATC+AGG | + | chr4.3:55508339-55508358 | None:intergenic | 45.0% | |
| CTGAGCCAAGTAGTATCTCA+AGG | + | chr4.3:55506691-55506710 | None:intergenic | 45.0% | |
| CTGATGAGCTTGAGGATGTT+AGG | - | chr4.3:55508337-55508356 | MS.gene073261:intron | 45.0% | |
| CTTAAACAACCACCTTGGTC+AGG | - | chr4.3:55508023-55508042 | MS.gene073261:intron | 45.0% | |
| GATGAGCTTGAGGATGTTAG+GGG | - | chr4.3:55508339-55508358 | MS.gene073261:intron | 45.0% | |
| GCAAGGAAAGTAAACTGTGG+CGG | - | chr4.3:55507369-55507388 | MS.gene073261:intron | 45.0% | |
| GCAGGGAATTTAGACTGTGA+AGG | + | chr4.3:55509311-55509330 | None:intergenic | 45.0% | |
| GCCAAGAGTCAAGGAGAAAA+GGG | + | chr4.3:55507096-55507115 | None:intergenic | 45.0% | |
| GGTATTTGCCATGGTATCAG+TGG | - | chr4.3:55509086-55509105 | MS.gene073261:intron | 45.0% | |
| GGTGACTTCACTCTTTACTG+TGG | - | chr4.3:55506009-55506028 | MS.gene073261:CDS | 45.0% | |
| GGTTGTGTGTTTAGGTCATG+AGG | - | chr4.3:55506972-55506991 | MS.gene073261:intron | 45.0% | |
| TATGTCCGATTCCGATCAGA+CGG | - | chr4.3:55507711-55507730 | MS.gene073261:intron | 45.0% | |
| TCACTGTTTGAAGGAGTAGG+AGG | - | chr4.3:55509254-55509273 | MS.gene073261:CDS | 45.0% | |
| TGAACTCTAGACCGTCTGAT+CGG | + | chr4.3:55507725-55507744 | None:intergenic | 45.0% | |
| TGCCAAGAGTCAAGGAGAAA+AGG | + | chr4.3:55507097-55507116 | None:intergenic | 45.0% | |
| TGCTTCTTGGAGTTCCTGTT+GGG | + | chr4.3:55505755-55505774 | None:intergenic | 45.0% | |
| TTGCAACTCGCCAGATTATG+TGG | + | chr4.3:55508559-55508578 | None:intergenic | 45.0% | |
| TTGGATGCAGCTATAGAAGC+AGG | - | chr4.3:55509026-55509045 | MS.gene073261:CDS | 45.0% | |
| ! | AGAAAAGCACACTGCTGCTA+GGG | + | chr4.3:55506937-55506956 | None:intergenic | 45.0% |
| ! | AGTGGTACGGAGAGAAGTAT+TGG | - | chr4.3:55508256-55508275 | MS.gene073261:intron | 45.0% |
| ! | ATGCTGCTTCTCTTTCTTCC+AGG | - | chr4.3:55506127-55506146 | MS.gene073261:intron | 45.0% |
| ! | ATTTTGGGCCTCCAAGATTC+CGG | - | chr4.3:55507151-55507170 | MS.gene073261:intron | 45.0% |
| ! | GACGGTCTAGAGTTCAAAGT+CGG | - | chr4.3:55507729-55507748 | MS.gene073261:intron | 45.0% |
| ! | GCCATGCCTGATGGAATTTT+GGG | - | chr4.3:55507136-55507155 | MS.gene073261:intron | 45.0% |
| ! | GGTCATCAGAAGCATGTGAA+TGG | - | chr4.3:55506993-55507012 | MS.gene073261:CDS | 45.0% |
| ! | TAGAAAAGCACACTGCTGCT+AGG | + | chr4.3:55506938-55506957 | None:intergenic | 45.0% |
| !! | AAGCGAGTTGGTATTTGCCA+TGG | - | chr4.3:55509077-55509096 | MS.gene073261:intron | 45.0% |
| !! | ACTTTTATTTGTGGCCGTGC+TGG | - | chr4.3:55506615-55506634 | MS.gene073261:CDS | 45.0% |
| !! | CGGTAAGTTGGTAAAGTGAC+AGG | + | chr4.3:55509127-55509146 | None:intergenic | 45.0% |
| !! | GAGTGATGGGTTGTGTGTTT+AGG | - | chr4.3:55506964-55506983 | MS.gene073261:intron | 45.0% |
| !! | GTGGTACGGAGAGAAGTATT+GGG | - | chr4.3:55508257-55508276 | MS.gene073261:intron | 45.0% |
| !! | TGGGTTGAAGGTGTTGATTC+GGG | + | chr4.3:55505736-55505755 | None:intergenic | 45.0% |
| !! | TGGTACGGAGAGAAGTATTG+GGG | - | chr4.3:55508258-55508277 | MS.gene073261:intron | 45.0% |
| !! | TTGTTTTCAGGCCAAGGTAG+TGG | - | chr4.3:55508173-55508192 | MS.gene073261:intron | 45.0% |
| AAAGAGTGGAGCATGAGGCA+TGG | + | chr4.3:55505821-55505840 | None:intergenic | 50.0% | |
| AACTCACATGGACCCGATAG+GGG | + | chr4.3:55507215-55507234 | None:intergenic | 50.0% | |
| AAGGAACTGTTCCCTGACCA+AGG | + | chr4.3:55508038-55508057 | None:intergenic | 50.0% | |
| ACAAGTGTGAGAGCCATTCC+AGG | + | chr4.3:55508468-55508487 | None:intergenic | 50.0% | |
| ACTCCAAGGACTCGTACTTG+GGG | + | chr4.3:55507331-55507350 | None:intergenic | 50.0% | |
| ACTTCGTGTTCCCGGTAAGT+TGG | + | chr4.3:55509139-55509158 | None:intergenic | 50.0% | |
| AGAAGCAGTCACCGTCACAA+CGG | - | chr4.3:55505768-55505787 | MS.gene073261:CDS | 50.0% | |
| AGAGCGATGTTCTTGTGCAC+TGG | - | chr4.3:55508430-55508449 | MS.gene073261:CDS | 50.0% | |
| AGCTATAGAAGCAGGAGAGG+TGG | - | chr4.3:55509034-55509053 | MS.gene073261:CDS | 50.0% | |
| AGGAGAAAAGGGCGGATAAG+TGG | + | chr4.3:55507085-55507104 | None:intergenic | 50.0% | |
| CAAACTCACATGGACCCGAT+AGG | + | chr4.3:55507217-55507236 | None:intergenic | 50.0% | |
| CAAGTACGAGTCCTTGGAGT+GGG | - | chr4.3:55507331-55507350 | MS.gene073261:intron | 50.0% | |
| CACTCCAAGGACTCGTACTT+GGG | + | chr4.3:55507332-55507351 | None:intergenic | 50.0% | |
| CCTTGCAGCCCAATTCAATC+CGG | + | chr4.3:55507411-55507430 | None:intergenic | 50.0% | |
| CGAACTTGATCGCACGGTTA+TGG | - | chr4.3:55507784-55507803 | MS.gene073261:intron | 50.0% | |
| CGCATAACCACGGTCAAATG+TGG | - | chr4.3:55508823-55508842 | MS.gene073261:intron | 50.0% | |
| CTACTTGGCTCAGTTCCAAC+AGG | - | chr4.3:55506698-55506717 | MS.gene073261:CDS | 50.0% | |
| CTAGACCGTCTGATCGGAAT+CGG | + | chr4.3:55507719-55507738 | None:intergenic | 50.0% | |
| CTATCGGGTCCATGTGAGTT+TGG | - | chr4.3:55507215-55507234 | MS.gene073261:intron | 50.0% | |
| CTCCCGTATAGCAACTCATC+AGG | + | chr4.3:55507976-55507995 | None:intergenic | 50.0% | |
| CTCGCAGGATAGTTTCCACT+AGG | + | chr4.3:55508396-55508415 | None:intergenic | 50.0% | |
| CTCTTGGCATACGTCACCAT+AGG | - | chr4.3:55507108-55507127 | MS.gene073261:intron | 50.0% | |
| CTGCTTCTTGGAGTTCCTGT+TGG | + | chr4.3:55505756-55505775 | None:intergenic | 50.0% | |
| CTTGCAGCCCAATTCAATCC+GGG | + | chr4.3:55507410-55507429 | None:intergenic | 50.0% | |
| GAGCTGCAAGGAAATTGCGA+AGG | + | chr4.3:55506766-55506785 | None:intergenic | 50.0% | |
| GATGAGTTGCTATACGGGAG+AGG | - | chr4.3:55507976-55507995 | MS.gene073261:intron | 50.0% | |
| GCCCAAAATTCCATCAGGCA+TGG | + | chr4.3:55507140-55507159 | None:intergenic | 50.0% | |
| GGAGAAAAGGGCGGATAAGT+GGG | + | chr4.3:55507084-55507103 | None:intergenic | 50.0% | |
| GGCTTAACTGGACAACGTGT+TGG | - | chr4.3:55505988-55506007 | MS.gene073261:CDS | 50.0% | |
| GTGACGTATGCCAAGAGTCA+AGG | + | chr4.3:55507105-55507124 | None:intergenic | 50.0% | |
| GTTTGAAGGAGTAGGAGGCA+TGG | - | chr4.3:55509259-55509278 | MS.gene073261:CDS | 50.0% | |
| TAGAAGCAGGAGAGGTGGTT+TGG | - | chr4.3:55509039-55509058 | MS.gene073261:CDS | 50.0% | |
| TCTGGAGGTGAAATGCATGG+AGG | - | chr4.3:55509218-55509237 | MS.gene073261:CDS | 50.0% | |
| TGCAGCTATAGAAGCAGGAG+AGG | - | chr4.3:55509031-55509050 | MS.gene073261:CDS | 50.0% | |
| TGGAGGCCCAAAATTCCATC+AGG | + | chr4.3:55507145-55507164 | None:intergenic | 50.0% | |
| TTGTGACGGTGACTGCTTCT+TGG | + | chr4.3:55505768-55505787 | None:intergenic | 50.0% | |
| ! | ACGGGAGAGGTGGTTTTCTA+TGG | - | chr4.3:55507989-55508008 | MS.gene073261:intron | 50.0% |
| ! | CAAGAGCACAAACACCAGCA+CGG | + | chr4.3:55506632-55506651 | None:intergenic | 50.0% |
| ! | CGGGAGAGGTGGTTTTCTAT+GGG | - | chr4.3:55507990-55508009 | MS.gene073261:intron | 50.0% |
| ! | CGTTTGAGACGCTCAAAGAG+TGG | + | chr4.3:55505835-55505854 | None:intergenic | 50.0% |
| ! | GCCCTTTTCTCCTTGACTCT+TGG | - | chr4.3:55507092-55507111 | MS.gene073261:intron | 50.0% |
| ! | GGCCATGCCTGATGGAATTT+TGG | - | chr4.3:55507135-55507154 | MS.gene073261:intron | 50.0% |
| ! | GGCGAAGTGCTTGATATGCA+AGG | - | chr4.3:55507352-55507371 | MS.gene073261:intron | 50.0% |
| ! | TGGCCATGGTGCCAATAGTT+GGG | - | chr4.3:55507276-55507295 | MS.gene073261:intron | 50.0% |
| ! | TTTTGGGCCTCCAAGATTCC+GGG | - | chr4.3:55507152-55507171 | MS.gene073261:intron | 50.0% |
| !! | AAGTATTGGGGTGCTGCACA+TGG | - | chr4.3:55508270-55508289 | MS.gene073261:intron | 50.0% |
| !! | TGGAGTTCCTGTTGGGTTGA+AGG | + | chr4.3:55505748-55505767 | None:intergenic | 50.0% |
| !! | TGTTTGTGCTCTTGGTGCTG+TGG | - | chr4.3:55506638-55506657 | MS.gene073261:CDS | 50.0% |
| AAAAGGGCGGATAAGTGGGC+CGG | + | chr4.3:55507080-55507099 | None:intergenic | 55.0% | |
| AACCCGTCAACCCGGAATCT+TGG | + | chr4.3:55507165-55507184 | None:intergenic | 55.0% | |
| AAGCACACTGCTGCTAGGGT+TGG | + | chr4.3:55506933-55506952 | None:intergenic | 55.0% | |
| AAGCCCACTATCCCCCTATC+GGG | - | chr4.3:55507200-55507219 | MS.gene073261:intron | 55.0% | |
| ACCGTCCGAACTTGATCGCA+CGG | - | chr4.3:55507778-55507797 | MS.gene073261:intron | 55.0% | |
| ACCGTGCGATCAAGTTCGGA+CGG | + | chr4.3:55507782-55507801 | None:intergenic | 55.0% | |
| ACTCACATGGACCCGATAGG+GGG | + | chr4.3:55507214-55507233 | None:intergenic | 55.0% | |
| ATAAGTGGGCCGGAAAAGGG+GGG | + | chr4.3:55507070-55507089 | None:intergenic | 55.0% | |
| CAAGCCCACTATCCCCCTAT+CGG | - | chr4.3:55507199-55507218 | MS.gene073261:intron | 55.0% | |
| CATGTGAGTTTGGCGGGAAC+AGG | - | chr4.3:55507225-55507244 | MS.gene073261:intron | 55.0% | |
| CCAAGTACGAGTCCTTGGAG+TGG | - | chr4.3:55507330-55507349 | MS.gene073261:intron | 55.0% | |
| CCACCCAACTATTGGCACCA+TGG | + | chr4.3:55507282-55507301 | None:intergenic | 55.0% | |
| CCACTCCAAGGACTCGTACT+TGG | + | chr4.3:55507333-55507352 | None:intergenic | 55.0% | |
| CCGGATTGAATTGGGCTGCA+AGG | - | chr4.3:55507408-55507427 | MS.gene073261:intron | 55.0% | |
| CGCTCAAAGAGTGGAGCATG+AGG | + | chr4.3:55505826-55505845 | None:intergenic | 55.0% | |
| CGGATAAGTGGGCCGGAAAA+GGG | + | chr4.3:55507073-55507092 | None:intergenic | 55.0% | |
| CTCCAAGGACTCGTACTTGG+GGG | + | chr4.3:55507330-55507349 | None:intergenic | 55.0% | |
| CTGTTCCCGCCAAACTCACA+TGG | + | chr4.3:55507227-55507246 | None:intergenic | 55.0% | |
| GAACTGTTCCCTGACCAAGG+TGG | + | chr4.3:55508035-55508054 | None:intergenic | 55.0% | |
| GAAGCAGTCACCGTCACAAC+GGG | - | chr4.3:55505769-55505788 | MS.gene073261:CDS | 55.0% | |
| GAGTTGCTATACGGGAGAGG+TGG | - | chr4.3:55507979-55507998 | MS.gene073261:intron | 55.0% | |
| GATAAGTGGGCCGGAAAAGG+GGG | + | chr4.3:55507071-55507090 | None:intergenic | 55.0% | |
| GCATACGTCACCATAGGCAC+GGG | - | chr4.3:55507114-55507133 | MS.gene073261:intron | 55.0% | |
| GGATAAGTGGGCCGGAAAAG+GGG | + | chr4.3:55507072-55507091 | None:intergenic | 55.0% | |
| GGCATACGTCACCATAGGCA+CGG | - | chr4.3:55507113-55507132 | MS.gene073261:intron | 55.0% | |
| GGGCTGCAAGGAAATTGCGA+AGG | - | chr4.3:55507420-55507439 | MS.gene073261:intron | 55.0% | |
| TCCAAGGACTCGTACTTGGG+GGG | + | chr4.3:55507329-55507348 | None:intergenic | 55.0% | |
| TCGGGTCCATGTGAGTTTGG+CGG | - | chr4.3:55507218-55507237 | MS.gene073261:intron | 55.0% | |
| ! | CCATGGTGCCAATAGTTGGG+TGG | - | chr4.3:55507279-55507298 | MS.gene073261:intron | 55.0% |
| ! | CCTCCAAGATTCCGGGTTGA+CGG | - | chr4.3:55507159-55507178 | MS.gene073261:intron | 55.0% |
| ! | CGTGCTGGTGTTTGTGCTCT+TGG | - | chr4.3:55506630-55506649 | MS.gene073261:CDS | 55.0% |
| ! | CTCCAAGATTCCGGGTTGAC+GGG | - | chr4.3:55507160-55507179 | MS.gene073261:intron | 55.0% |
| ! | CTGGCCATGGTGCCAATAGT+TGG | - | chr4.3:55507275-55507294 | MS.gene073261:intron | 55.0% |
| ! | GTGCTGCACATGGTTTGGCT+GGG | - | chr4.3:55508280-55508299 | MS.gene073261:intron | 55.0% |
| ! | GTTCTTGTGCACTGGTGCCA+TGG | - | chr4.3:55508438-55508457 | MS.gene073261:intron | 55.0% |
| !! | AGATTCCGGGTTGACGGGTT+AGG | - | chr4.3:55507165-55507184 | MS.gene073261:intron | 55.0% |
| !! | GATTCCGGGTTGACGGGTTA+GGG | - | chr4.3:55507166-55507185 | MS.gene073261:intron | 55.0% |
| !! | TTGGGGTGCTGCACATGGTT+TGG | - | chr4.3:55508275-55508294 | MS.gene073261:intron | 55.0% |
| CAAGCACTTCGCCCACTCCA+AGG | + | chr4.3:55507345-55507364 | None:intergenic | 60.0% | |
| CCGTCAACCCGGAATCTTGG+AGG | + | chr4.3:55507162-55507181 | None:intergenic | 60.0% | |
| CGGGTCCATGTGAGTTTGGC+GGG | - | chr4.3:55507219-55507238 | MS.gene073261:intron | 60.0% | |
| GAGCCATTCCAGGAGCTCCA+TGG | + | chr4.3:55508458-55508477 | None:intergenic | 60.0% | |
| GCGGATAAGTGGGCCGGAAA+AGG | + | chr4.3:55507074-55507093 | None:intergenic | 60.0% | |
| GGACCCGATAGGGGGATAGT+GGG | + | chr4.3:55507206-55507225 | None:intergenic | 60.0% | |
| GTGCCATGGAGCTCCTGGAA+TGG | - | chr4.3:55508452-55508471 | MS.gene073261:intron | 60.0% | |
| TGAGTCACCGCCCGTTGTGA+CGG | + | chr4.3:55505782-55505801 | None:intergenic | 60.0% | |
| TGGACCCGATAGGGGGATAG+TGG | + | chr4.3:55507207-55507226 | None:intergenic | 60.0% | |
| ! | CGCGGTTTGCTCAAGCGAGT+TGG | - | chr4.3:55509065-55509084 | MS.gene073261:CDS | 60.0% |
| ! | GGAGAGGTGGTTTGGAGTCG+CGG | - | chr4.3:55509047-55509066 | MS.gene073261:CDS | 60.0% |
| ! | GGTGCTGCACATGGTTTGGC+TGG | - | chr4.3:55508279-55508298 | MS.gene073261:intron | 60.0% |
| ! | TCCCACACTCCCCCCTTTTC+CGG | - | chr4.3:55507058-55507077 | MS.gene073261:CDS | 60.0% |
| !! | AGGGGGATAGTGGGCTTGGT+AGG | + | chr4.3:55507197-55507216 | None:intergenic | 60.0% |
| !! | CGATAGGGGGATAGTGGGCT+TGG | + | chr4.3:55507201-55507220 | None:intergenic | 60.0% |
| !! | GGGATAGTGGGCTTGGTAGG+CGG | + | chr4.3:55507194-55507213 | None:intergenic | 60.0% |
| GAGCATGAGGCATGGCGAGG+AGG | + | chr4.3:55505813-55505832 | None:intergenic | 65.0% | |
| GAGGCATGGCGAGGAGGTTG+AGG | + | chr4.3:55505807-55505826 | None:intergenic | 65.0% | |
| GCAGTCACCGTCACAACGGG+CGG | - | chr4.3:55505772-55505791 | MS.gene073261:CDS | 65.0% | |
| GCCCCCCAAGTACGAGTCCT+TGG | - | chr4.3:55507325-55507344 | MS.gene073261:intron | 65.0% | |
| GGCTCCCTAACCCGTCAACC+CGG | + | chr4.3:55507173-55507192 | None:intergenic | 65.0% | |
| GTGGAGCATGAGGCATGGCG+AGG | + | chr4.3:55505816-55505835 | None:intergenic | 65.0% | |
| TAGGCACGGGCCATGCCTGA+TGG | - | chr4.3:55507127-55507146 | MS.gene073261:intron | 65.0% | |
| TCAGGCATGGCCCGTGCCTA+TGG | + | chr4.3:55507127-55507146 | None:intergenic | 65.0% | |
| ! | GCCGGAAAAGGGGGGAGTGT+GGG | + | chr4.3:55507062-55507081 | None:intergenic | 65.0% |
| !! | CACTGGTGCCATGGAGCTCC+TGG | - | chr4.3:55508447-55508466 | MS.gene073261:intron | 65.0% |
| GAACAGGTCACCCCGCCACG+CGG | - | chr4.3:55507241-55507260 | MS.gene073261:intron | 70.0% | |
| GGCCGGAAAAGGGGGGAGTG+TGG | + | chr4.3:55507063-55507082 | None:intergenic | 70.0% | |
| AGGTCACCCCGCCACGCGGT+GGG | - | chr4.3:55507245-55507264 | MS.gene073261:intron | 75.0% | |
| ! | GGTGGGCACGTGGCTGGCCA+TGG | - | chr4.3:55507262-55507281 | MS.gene073261:intron | 75.0% |
| ! | CACGTGCCCACCGCGTGGCG+GGG | + | chr4.3:55507254-55507273 | None:intergenic | 80.0% |
| ! | CAGGTCACCCCGCCACGCGG+TGG | - | chr4.3:55507244-55507263 | MS.gene073261:intron | 80.0% |
| ! | CCACGCGGTGGGCACGTGGC+TGG | - | chr4.3:55507256-55507275 | MS.gene073261:intron | 80.0% |
| ! | CCACGTGCCCACCGCGTGGC+GGG | + | chr4.3:55507255-55507274 | None:intergenic | 80.0% |
| ! | CCAGCCACGTGCCCACCGCG+TGG | + | chr4.3:55507259-55507278 | None:intergenic | 80.0% |
| ! | GCCACGTGCCCACCGCGTGG+CGG | + | chr4.3:55507256-55507275 | None:intergenic | 80.0% |
| ! | CCCGCCACGCGGTGGGCACG+TGG | - | chr4.3:55507252-55507271 | MS.gene073261:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 55505718 | 55509343 | 55505718 | ID=MS.gene073261 |
| chr4.3 | mRNA | 55505718 | 55509343 | 55505718 | ID=MS.gene073261.t1;Parent=MS.gene073261 |
| chr4.3 | exon | 55509182 | 55509343 | 55509182 | ID=MS.gene073261.t1.exon1;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55509182 | 55509343 | 55509182 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| chr4.3 | exon | 55508913 | 55509091 | 55508913 | ID=MS.gene073261.t1.exon2;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55508913 | 55509091 | 55508913 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| chr4.3 | exon | 55508342 | 55508453 | 55508342 | ID=MS.gene073261.t1.exon3;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55508342 | 55508453 | 55508342 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| chr4.3 | exon | 55506993 | 55507109 | 55506993 | ID=MS.gene073261.t1.exon4;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55506993 | 55507109 | 55506993 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| chr4.3 | exon | 55506561 | 55506878 | 55506561 | ID=MS.gene073261.t1.exon5;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55506561 | 55506878 | 55506561 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| chr4.3 | exon | 55505718 | 55506056 | 55505718 | ID=MS.gene073261.t1.exon6;Parent=MS.gene073261.t1 |
| chr4.3 | CDS | 55505718 | 55506056 | 55505718 | ID=cds.MS.gene073261.t1;Parent=MS.gene073261.t1 |
| Gene Sequence |
| Protein sequence |
