Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79098.t1 | XP_003601926.1 | 98.1 | 415 | 8 | 0 | 1 | 415 | 1 | 415 | 3.40E-240 | 840.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79098.t1 | Q9FJN7 | 67.6 | 398 | 119 | 2 | 27 | 415 | 37 | 433 | 3.9e-160 | 565.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79098.t1 | G7J384 | 98.1 | 415 | 8 | 0 | 1 | 415 | 1 | 415 | 2.4e-240 | 840.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98661 | MS.gene79098 | PPI |
| MS.gene031394 | MS.gene79098 | PPI |
| MS.gene059857 | MS.gene79098 | PPI |
| MS.gene065179 | MS.gene79098 | PPI |
| MS.gene79098 | MS.gene84419 | PPI |
| MS.gene79098 | MS.gene069370 | PPI |
| MS.gene073261 | MS.gene79098 | PPI |
| MS.gene068489 | MS.gene79098 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79098.t1 | MTR_3g086910 | 98.072 | 415 | 8 | 0 | 1 | 415 | 1 | 415 | 0.0 | 837 |
| MS.gene79098.t1 | MTR_3g086910 | 97.097 | 310 | 6 | 1 | 1 | 307 | 1 | 310 | 0.0 | 618 |
| MS.gene79098.t1 | MTR_2g079700 | 48.718 | 390 | 179 | 7 | 32 | 415 | 43 | 417 | 2.47e-117 | 348 |
| MS.gene79098.t1 | MTR_6g007490 | 47.520 | 383 | 183 | 7 | 36 | 415 | 74 | 441 | 5.01e-113 | 338 |
| MS.gene79098.t1 | MTR_6g007490 | 45.956 | 272 | 130 | 6 | 36 | 304 | 74 | 331 | 8.73e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79098.t1 | AT5G65280 | 67.250 | 400 | 119 | 3 | 26 | 415 | 36 | 433 | 0.0 | 559 |
| MS.gene79098.t1 | AT5G65280 | 70.779 | 308 | 89 | 1 | 108 | 415 | 5 | 311 | 3.14e-161 | 456 |
| MS.gene79098.t1 | AT1G52920 | 46.973 | 413 | 191 | 8 | 9 | 415 | 20 | 410 | 8.11e-119 | 352 |
| MS.gene79098.t1 | AT2G20770 | 45.431 | 383 | 191 | 7 | 36 | 415 | 38 | 405 | 1.25e-102 | 310 |
Find 112 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCCGAGGAAGGTGGTTT+TGG | 0.220436 | 3.2:+74192352 | MS.gene79098:CDS |
| TCTCTCTTCCATGGACTTGC+TGG | 0.235781 | 3.2:+74193306 | MS.gene79098:CDS |
| CTCTTCATATATAATATCTT+TGG | 0.254651 | 3.2:-74193196 | None:intergenic |
| AATAGGCATTAGAATGTCTT+TGG | 0.278410 | 3.2:-74192461 | None:intergenic |
| TTGCTGGGACAGCATGTCTT+TGG | 0.279695 | 3.2:+74193322 | MS.gene79098:CDS |
| GGACTTGCTGATGGCGTATC+TGG | 0.310070 | 3.2:+74193138 | MS.gene79098:CDS |
| CTTGGATTCCCTTCACTTGA+TGG | 0.315242 | 3.2:-74192706 | None:intergenic |
| CCTGATAACTCTAGGTTTCC+AGG | 0.320293 | 3.2:+74193360 | MS.gene79098:CDS |
| CTTCACCTAGGTGCTTGTTT+AGG | 0.331466 | 3.2:-74192429 | None:intergenic |
| TGCAGGTGGTGGAGGTGAAT+TGG | 0.334822 | 3.2:+74189364 | MS.gene79098:intron |
| GGTGCAGCAAATGGCCTTGC+TGG | 0.355829 | 3.2:+74192574 | MS.gene79098:CDS |
| GCCAATACTGCATCAATAAT+AGG | 0.367653 | 3.2:-74192478 | None:intergenic |
| CTGCGATCGTACGAGGTTAC+CGG | 0.376517 | 3.2:+74189450 | MS.gene79098:CDS |
| TCTCGTAGTTCCCTGTCATT+TGG | 0.377720 | 3.2:-74193060 | None:intergenic |
| AACATAACACCAAGTCCTTA+TGG | 0.391089 | 3.2:-74189476 | None:intergenic |
| CACTGCACTAACTTATCTCT+TGG | 0.393063 | 3.2:-74192724 | None:intergenic |
| CCTGGAAACCTAGAGTTATC+AGG | 0.393064 | 3.2:-74193360 | None:intergenic |
| CAGTGGAGTCATGGTGCAAC+TGG | 0.395385 | 3.2:+74192742 | MS.gene79098:CDS |
| GCCTATTATTGATGCAGTAT+TGG | 0.402086 | 3.2:+74192477 | MS.gene79098:CDS |
| ATGTCATATGATCTTCTATA+CGG | 0.404747 | 3.2:+74192376 | MS.gene79098:CDS |
| CTTCCTCGGGTCCAACAGGC+AGG | 0.407249 | 3.2:-74192342 | None:intergenic |
| ATTGATCCAACGGTGTATAC+TGG | 0.414658 | 3.2:+74189402 | MS.gene79098:CDS |
| CCACCTTCCTCGGGTCCAAC+AGG | 0.414679 | 3.2:-74192346 | None:intergenic |
| CCACAGCTCCAAGCGCGTAT+AGG | 0.417923 | 3.2:-74191705 | None:intergenic |
| AGCTGTGGTTGCTAATTACA+TGG | 0.432341 | 3.2:+74191720 | MS.gene79098:CDS |
| CTCTCTTCCATGGACTTGCT+GGG | 0.435404 | 3.2:+74193307 | MS.gene79098:CDS |
| TTGGATTCCCTTCACTTGAT+GGG | 0.439227 | 3.2:-74192705 | None:intergenic |
| ACGGACGAGCTGGATTCCTA+TGG | 0.441906 | 3.2:+74192395 | MS.gene79098:CDS |
| CATCCCAAAACCACCTTCCT+CGG | 0.449304 | 3.2:-74192356 | None:intergenic |
| TAAGGACTTGGTGTTATGTT+CGG | 0.453008 | 3.2:+74189479 | MS.gene79098:CDS |
| GTATTGGCCGGCGGTAGAGC+AGG | 0.456868 | 3.2:+74192493 | MS.gene79098:CDS |
| TAGAAGCAGGGGAAGTTGTA+TGG | 0.466075 | 3.2:+74193091 | MS.gene79098:CDS |
| GATGGGTAATTTCCACTATG+AGG | 0.467624 | 3.2:-74192688 | None:intergenic |
| ATTATGGGTGCAGGTGGTGG+AGG | 0.480199 | 3.2:+74189356 | MS.gene79098:intron |
| AAATGGATTGGTAAAGAAAG+TGG | 0.483936 | 3.2:+74193116 | MS.gene79098:CDS |
| CGAGATGCAGCAATAGAAGC+AGG | 0.491904 | 3.2:+74193078 | MS.gene79098:CDS |
| ACGGTGTATACTGGCTTGCT+TGG | 0.500752 | 3.2:+74189411 | MS.gene79098:CDS |
| TCAGCATATTCACTTGGAAG+TGG | 0.502868 | 3.2:-74192622 | None:intergenic |
| TGAGGCTATACATGAGCCTT+CGG | 0.505874 | 3.2:+74189028 | MS.gene79098:CDS |
| CACTTGCCTGCGATCGTACG+AGG | 0.506824 | 3.2:+74189443 | MS.gene79098:CDS |
| CGAGGTTACCGGCTGCCATA+AGG | 0.507715 | 3.2:+74189461 | MS.gene79098:CDS |
| TACCGGCTGCCATAAGGACT+TGG | 0.511337 | 3.2:+74189467 | MS.gene79098:CDS |
| AACGAGAGAGCCCTGCCTGT+TGG | 0.511760 | 3.2:+74192331 | MS.gene79098:CDS |
| CTGTTGCACGTGACTCCCTC+AGG | 0.513799 | 3.2:+74189523 | MS.gene79098:CDS |
| CGGTAACCTCGTACGATCGC+AGG | 0.517235 | 3.2:-74189449 | None:intergenic |
| CTGCCTGTTGGACCCGAGGA+AGG | 0.519990 | 3.2:+74192343 | MS.gene79098:CDS |
| TGTATCGATGGCACGGGACG+AGG | 0.520089 | 3.2:+74192545 | MS.gene79098:CDS |
| TACATTGTCTAAAGCAGCAC+AGG | 0.520883 | 3.2:+74192774 | MS.gene79098:CDS |
| ATCCCAAAACCACCTTCCTC+GGG | 0.522029 | 3.2:-74192355 | None:intergenic |
| ATTATTGATGCAGTATTGGC+CGG | 0.523385 | 3.2:+74192481 | MS.gene79098:CDS |
| AATGGCTACTCTCTCTTCCA+TGG | 0.523997 | 3.2:+74193297 | MS.gene79098:CDS |
| GATCTTCTATACGGACGAGC+TGG | 0.524233 | 3.2:+74192385 | MS.gene79098:CDS |
| TGGTGGAGGTGAATTGGAAT+CGG | 0.525278 | 3.2:+74189370 | MS.gene79098:CDS |
| AATGACATCTTCAGTGATTG+AGG | 0.526255 | 3.2:+74188995 | None:intergenic |
| CCTATACGCGCTTGGAGCTG+TGG | 0.528012 | 3.2:+74191705 | MS.gene79098:CDS |
| CAAGTTGTTGCGGATGGCAA+TGG | 0.529476 | 3.2:+74193279 | MS.gene79098:CDS |
| GTATACTGGCTTGCTTGGTA+CGG | 0.529518 | 3.2:+74189416 | MS.gene79098:CDS |
| AGTAAAAGATTCCCTCATAG+TGG | 0.532411 | 3.2:+74192676 | MS.gene79098:CDS |
| AGCCCTGCCTGTTGGACCCG+AGG | 0.533647 | 3.2:+74192339 | MS.gene79098:CDS |
| TGATTGCACCTGATAACTCT+AGG | 0.537731 | 3.2:+74193352 | MS.gene79098:CDS |
| GTATGATAAAGCTAGAGCTC+TGG | 0.539411 | 3.2:+74193245 | MS.gene79098:CDS |
| ATGGGTAATTTCCACTATGA+GGG | 0.540868 | 3.2:-74192687 | None:intergenic |
| GGAAATTACCCATCAAGTGA+AGG | 0.544436 | 3.2:+74192697 | MS.gene79098:CDS |
| TGAATATGCTGAAGATGTCA+AGG | 0.544547 | 3.2:+74192633 | MS.gene79098:CDS |
| CACCAAGTCCTTATGGCAGC+CGG | 0.546006 | 3.2:-74189469 | None:intergenic |
| ATGCTGTCCCAGCAAGTCCA+TGG | 0.546269 | 3.2:-74193314 | None:intergenic |
| TGGCACGGGACGAGGTACTT+AGG | 0.547567 | 3.2:+74192553 | MS.gene79098:CDS |
| AATGGATTGGTAAAGAAAGT+GGG | 0.551995 | 3.2:+74193117 | MS.gene79098:CDS |
| ACATCTTCAGCATATTCACT+TGG | 0.554521 | 3.2:-74192628 | None:intergenic |
| ACCATCTATAATTCATAACC+TGG | 0.556145 | 3.2:-74193378 | None:intergenic |
| AGGTACTTAGGTGCAGCAAA+TGG | 0.557807 | 3.2:+74192565 | MS.gene79098:CDS |
| AAGTTAGTGCAGTGGAGTCA+TGG | 0.561990 | 3.2:+74192733 | MS.gene79098:CDS |
| CGGACGAGCTGGATTCCTAT+GGG | 0.567390 | 3.2:+74192396 | MS.gene79098:CDS |
| AAGATATTATATATGAAGAG+AGG | 0.573823 | 3.2:+74193199 | MS.gene79098:CDS |
| AAAAGCTGCAATCTCTCTCA+AGG | 0.574056 | 3.2:+74189115 | MS.gene79098:CDS |
| TTCCTCGGGTCCAACAGGCA+GGG | 0.575233 | 3.2:-74192341 | None:intergenic |
| GTAGAGTGAAAGAAAAGCAT+AGG | 0.575709 | 3.2:-74193166 | None:intergenic |
| CCTGTTGGACCCGAGGAAGG+TGG | 0.580002 | 3.2:+74192346 | MS.gene79098:CDS |
| AGAGGAGGCCTATACGCGCT+TGG | 0.581069 | 3.2:+74191697 | MS.gene79098:CDS |
| CCGTTGATGTATCGATGGCA+CGG | 0.585807 | 3.2:+74192538 | MS.gene79098:CDS |
| TGCAATCTCTCTCAAGGACG+AGG | 0.588362 | 3.2:+74189121 | MS.gene79098:CDS |
| GAAATTACCCATCAAGTGAA+GGG | 0.589356 | 3.2:+74192698 | MS.gene79098:CDS |
| AGATATTATATATGAAGAGA+GGG | 0.592109 | 3.2:+74193200 | MS.gene79098:CDS |
| GAAGAGCAAGTTGTTGCGGA+TGG | 0.592187 | 3.2:+74193273 | MS.gene79098:CDS |
| GAGAGAAGTGATTGATCCAA+CGG | 0.594251 | 3.2:+74189392 | MS.gene79098:CDS |
| CAAGAGATAAGTTAGTGCAG+TGG | 0.595756 | 3.2:+74192725 | MS.gene79098:CDS |
| TGGACACTGTATCTTCACCT+AGG | 0.595895 | 3.2:-74192441 | None:intergenic |
| GAGGGAGTCACGTGCAACAG+TGG | 0.596154 | 3.2:-74189520 | None:intergenic |
| AAGAAAGTGGGACTTGCTGA+TGG | 0.600758 | 3.2:+74193129 | MS.gene79098:CDS |
| TTAGGAACAATGCAGCCCAT+AGG | 0.602891 | 3.2:-74192411 | None:intergenic |
| AGATGCAGCAATAGAAGCAG+GGG | 0.610957 | 3.2:+74193080 | MS.gene79098:CDS |
| AGCAAGCCAGTATACACCGT+TGG | 0.612153 | 3.2:-74189408 | None:intergenic |
| ATGACATCTTCAGTGATTGA+GGG | 0.616250 | 3.2:+74188996 | MS.gene79098:CDS |
| GAGATGCAGCAATAGAAGCA+GGG | 0.617431 | 3.2:+74193079 | MS.gene79098:CDS |
| CGTTGATGTATCGATGGCAC+GGG | 0.619816 | 3.2:+74192539 | MS.gene79098:CDS |
| CACTTGGAAGTGGAAAATGA+AGG | 0.623493 | 3.2:-74192612 | None:intergenic |
| AGTGAAAGATTTCCAACCGT+AGG | 0.625562 | 3.2:-74189074 | None:intergenic |
| ACTGTCCGTTGATGTATCGA+TGG | 0.628349 | 3.2:+74192533 | MS.gene79098:CDS |
| CTGTGGTTGCTAATTACATG+GGG | 0.632443 | 3.2:+74191722 | MS.gene79098:CDS |
| GCTGTGGTTGCTAATTACAT+GGG | 0.639480 | 3.2:+74191721 | MS.gene79098:CDS |
| GAATATGCTGAAGATGTCAA+GGG | 0.646716 | 3.2:+74192634 | MS.gene79098:CDS |
| ACATCTTCAGTGATTGAGGG+TGG | 0.648605 | 3.2:+74188999 | MS.gene79098:CDS |
| GAGTCATGGTGCAACTGGGA+TGG | 0.649370 | 3.2:+74192747 | MS.gene79098:CDS |
| AGACGCTCCTGCTCTACCGC+CGG | 0.651744 | 3.2:-74192500 | None:intergenic |
| AGTGGAGTCATGGTGCAACT+GGG | 0.652142 | 3.2:+74192743 | MS.gene79098:CDS |
| ACTTGAAGAGCAAGTTGTTG+CGG | 0.655177 | 3.2:+74193269 | MS.gene79098:CDS |
| GATTGAGGGTGGACACGATG+AGG | 0.656832 | 3.2:+74189010 | MS.gene79098:CDS |
| CCGTGCCATCGATACATCAA+CGG | 0.671169 | 3.2:-74192538 | None:intergenic |
| ATTGATGCAGTATTGGCCGG+CGG | 0.677412 | 3.2:+74192484 | MS.gene79098:CDS |
| TTGTTCCTAAACAAGCACCT+AGG | 0.686564 | 3.2:+74192424 | MS.gene79098:CDS |
| GCACATGAAGAATACCAGCA+AGG | 0.692857 | 3.2:-74192588 | None:intergenic |
| TGTGGTTGCTAATTACATGG+GGG | 0.767344 | 3.2:+74191723 | MS.gene79098:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTATTTTT+TGG | + | chr3.2:74189668-74189687 | MS.gene79098:intron | 0.0% |
| !! | ACAAAATATGATATATTTAT+AGG | - | chr3.2:74192902-74192921 | None:intergenic | 10.0% |
| !! | CAAAATATGATATATTTATA+GGG | - | chr3.2:74192901-74192920 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAATGTGTAAAT+AGG | + | chr3.2:74190867-74190886 | MS.gene79098:intron | 10.0% |
| !! | TTTAAAAAAAAAATGCATAT+AGG | - | chr3.2:74191270-74191289 | None:intergenic | 10.0% |
| !!! | AACCTTTATTTTAATTTATA+AGG | - | chr3.2:74191014-74191033 | None:intergenic | 10.0% |
| !!! | ACCTTTATTTTAATTTATAA+GGG | - | chr3.2:74191013-74191032 | None:intergenic | 10.0% |
| !!! | CTAATAATTAATTTTTGTAA+AGG | + | chr3.2:74190609-74190628 | MS.gene79098:intron | 10.0% |
| !!! | TGTAATTTTTTTTTTTTTGT+GGG | + | chr3.2:74190070-74190089 | MS.gene79098:intron | 10.0% |
| !!! | TTGAGATATTTAATTTTTTA+AGG | - | chr3.2:74190692-74190711 | None:intergenic | 10.0% |
| !!! | TTGATTTAATTGAAATTTTT+TGG | + | chr3.2:74191941-74191960 | MS.gene79098:intron | 10.0% |
| !! | ATAGGTCAAATTTATTTAAT+TGG | - | chr3.2:74191252-74191271 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATTACAC+AGG | - | chr3.2:74190069-74190088 | None:intergenic | 15.0% |
| !! | GTACTAAATAAACAAATTAA+AGG | - | chr3.2:74190894-74190913 | None:intergenic | 15.0% |
| !! | TAAAAACAAATAATGAAGTT+TGG | - | chr3.2:74190420-74190439 | None:intergenic | 15.0% |
| !! | TATATACAAATTTATTTGCT+AGG | + | chr3.2:74189691-74189710 | MS.gene79098:intron | 15.0% |
| !! | TCCCTTATAAATTAAAATAA+AGG | + | chr3.2:74191009-74191028 | MS.gene79098:intron | 15.0% |
| !!! | ATTTTAATTTATAAGGGAAT+TGG | - | chr3.2:74191007-74191026 | None:intergenic | 15.0% |
| !!! | GTAATTTTTTTTTTTTTGTG+GGG | + | chr3.2:74190071-74190090 | MS.gene79098:intron | 15.0% |
| !!! | GTGTAATTTTTTTTTTTTTG+TGG | + | chr3.2:74190069-74190088 | MS.gene79098:intron | 15.0% |
| !!! | TTAACAAGTATTGAAATTAT+GGG | + | chr3.2:74189341-74189360 | MS.gene79098:intron | 15.0% |
| !!! | TTATGAATTATGATTTGTTT+TGG | - | chr3.2:74192814-74192833 | None:intergenic | 15.0% |
| !!! | TTTAATTGAAATTTTTTGGT+TGG | + | chr3.2:74191945-74191964 | MS.gene79098:intron | 15.0% |
| !!! | TTTTGTTAGAGATTTAATAA+TGG | - | chr3.2:74191644-74191663 | None:intergenic | 15.0% |
| !! | AAGATATTATATATGAAGAG+AGG | + | chr3.2:74193199-74193218 | MS.gene79098:CDS | 20.0% |
| !! | AGATATTATATATGAAGAGA+GGG | + | chr3.2:74193200-74193219 | MS.gene79098:CDS | 20.0% |
| !! | CTCTTCATATATAATATCTT+TGG | - | chr3.2:74193199-74193218 | None:intergenic | 20.0% |
| !! | TTTATAAAATCGTTGAACAA+TGG | + | chr3.2:74191145-74191164 | MS.gene79098:intron | 20.0% |
| !!! | AAAAACTCAAAACACTTTTT+CGG | - | chr3.2:74191331-74191350 | None:intergenic | 20.0% |
| !!! | ACAAACTAATTTTAGTAAGT+AGG | - | chr3.2:74192019-74192038 | None:intergenic | 20.0% |
| !!! | ATTGTTCAACGATTTTATAA+AGG | - | chr3.2:74191146-74191165 | None:intergenic | 20.0% |
| !!! | GTTAACAAGTATTGAAATTA+TGG | + | chr3.2:74189340-74189359 | MS.gene79098:intron | 20.0% |
| !!! | TACAATTTTACTTAATTGAG+AGG | + | chr3.2:74190005-74190024 | MS.gene79098:intron | 20.0% |
| ! | ATCTATTTGATCTATCATGA+TGG | + | chr3.2:74191992-74192011 | MS.gene79098:intron | 25.0% |
| ! | ATGTCATATGATCTTCTATA+CGG | + | chr3.2:74192376-74192395 | MS.gene79098:CDS | 25.0% |
| ! | ATTATATTTGCTCCTTTAAC+CGG | - | chr3.2:74190222-74190241 | None:intergenic | 25.0% |
| ! | ATTTGCAGGAAAAATTTAGA+GGG | - | chr3.2:74192930-74192949 | None:intergenic | 25.0% |
| ! | CACAATATTGATAGAATGAT+AGG | + | chr3.2:74189881-74189900 | MS.gene79098:intron | 25.0% |
| ! | TAAAGACGTTAAATAATGAG+CGG | + | chr3.2:74189749-74189768 | MS.gene79098:intron | 25.0% |
| ! | TCATCAAAGTTGTCTAATTT+GGG | - | chr3.2:74191423-74191442 | None:intergenic | 25.0% |
| ! | TTCAAAATCACAAATTTGCA+AGG | + | chr3.2:74191209-74191228 | MS.gene79098:intron | 25.0% |
| ! | TTTAAAGAGTTGTCAAAAAG+TGG | + | chr3.2:74191541-74191560 | MS.gene79098:intron | 25.0% |
| !! | AAATGCTTTTAATGATGTGT+AGG | + | chr3.2:74192303-74192322 | MS.gene79098:intron | 25.0% |
| !! | TAATTCATAACTTGTCTTCA+TGG | + | chr3.2:74192824-74192843 | MS.gene79098:intron | 25.0% |
| !! | TTAGTCCCTTATCTTTATTT+CGG | + | chr3.2:74190823-74190842 | MS.gene79098:intron | 25.0% |
| !!! | AGTACAATTAAGTTGATGAA+CGG | - | chr3.2:74190132-74190151 | None:intergenic | 25.0% |
| !!! | GCTTTTAAGAATGTTTCATT+AGG | - | chr3.2:74189101-74189120 | None:intergenic | 25.0% |
| !!! | GGTGTTTAAGTTTTTATAGA+TGG | + | chr3.2:74191368-74191387 | MS.gene79098:intron | 25.0% |
| AAAAATATGAATCCTACGGT+TGG | + | chr3.2:74189062-74189081 | MS.gene79098:CDS | 30.0% | |
| AACCTGCAAACAAATATATC+CGG | - | chr3.2:74193037-74193056 | None:intergenic | 30.0% | |
| AATAGGCATTAGAATGTCTT+TGG | - | chr3.2:74192464-74192483 | None:intergenic | 30.0% | |
| AATTGTGACCACATGAAAAT+TGG | + | chr3.2:74192079-74192098 | MS.gene79098:intron | 30.0% | |
| AGAGATACATGTTTGTCATT+AGG | - | chr3.2:74190362-74190381 | None:intergenic | 30.0% | |
| AGTTGTATGGAAAAATGGAT+TGG | + | chr3.2:74193104-74193123 | MS.gene79098:CDS | 30.0% | |
| CACCAAAAATATGAATCCTA+CGG | + | chr3.2:74189058-74189077 | MS.gene79098:CDS | 30.0% | |
| CATTTGCAGGAAAAATTTAG+AGG | - | chr3.2:74192931-74192950 | None:intergenic | 30.0% | |
| GAAACCCGAAATAAAGATAA+GGG | - | chr3.2:74190831-74190850 | None:intergenic | 30.0% | |
| GAGATACATGTTTGTCATTA+GGG | - | chr3.2:74190361-74190380 | None:intergenic | 30.0% | |
| GTCATCAAAGTTGTCTAATT+TGG | - | chr3.2:74191424-74191443 | None:intergenic | 30.0% | |
| TATAAGGGAATTGGTAAAGT+GGG | - | chr3.2:74190998-74191017 | None:intergenic | 30.0% | |
| TCAAGCCAAAAAAAGAAATG+CGG | - | chr3.2:74190795-74190814 | None:intergenic | 30.0% | |
| TGAAACCCGAAATAAAGATA+AGG | - | chr3.2:74190832-74190851 | None:intergenic | 30.0% | |
| TGAAGAATTGGGAAAAACAT+GGG | - | chr3.2:74191045-74191064 | None:intergenic | 30.0% | |
| TGAGCTAACATATAAAACTC+AGG | + | chr3.2:74191103-74191122 | MS.gene79098:intron | 30.0% | |
| TGTAGTCACTAGTCATTAAT+AGG | - | chr3.2:74189910-74189929 | None:intergenic | 30.0% | |
| TGTTAGTATATGTTTCGTGT+CGG | + | chr3.2:74189275-74189294 | MS.gene79098:intron | 30.0% | |
| TTATAAGGGAATTGGTAAAG+TGG | - | chr3.2:74190999-74191018 | None:intergenic | 30.0% | |
| TTGTGATTGGACAAAAACAA+TGG | + | chr3.2:74191460-74191479 | MS.gene79098:intron | 30.0% | |
| ! | AACCGTAGGATTCATATTTT+TGG | - | chr3.2:74189063-74189082 | None:intergenic | 30.0% |
| ! | AGTAATTTGTCTCAAACGTA+TGG | + | chr3.2:74191889-74191908 | MS.gene79098:intron | 30.0% |
| ! | CTCTAAATTTTTCCTGCAAA+TGG | + | chr3.2:74192929-74192948 | MS.gene79098:intron | 30.0% |
| ! | GAAAGTGGGTATTACTATTT+TGG | - | chr3.2:74191808-74191827 | None:intergenic | 30.0% |
| ! | TAACATTGTTAGCCTATTGA+TGG | - | chr3.2:74190935-74190954 | None:intergenic | 30.0% |
| ! | TAGTCCCTTATCTTTATTTC+GGG | + | chr3.2:74190824-74190843 | MS.gene79098:intron | 30.0% |
| ! | TCACTTGCAATTTCTTCTTT+TGG | + | chr3.2:74190297-74190316 | MS.gene79098:intron | 30.0% |
| !! | AAATGGATTGGTAAAGAAAG+TGG | + | chr3.2:74193116-74193135 | MS.gene79098:CDS | 30.0% |
| !! | AATGGATTGGTAAAGAAAGT+GGG | + | chr3.2:74193117-74193136 | MS.gene79098:CDS | 30.0% |
| !! | CTTTATTTCGGGTTTCATAT+TGG | + | chr3.2:74190835-74190854 | MS.gene79098:intron | 30.0% |
| !!! | CTTATCCGCATTTCTTTTTT+TGG | + | chr3.2:74190787-74190806 | MS.gene79098:intron | 30.0% |
| AACATAACACCAAGTCCTTA+TGG | - | chr3.2:74189479-74189498 | None:intergenic | 35.0% | |
| AATTGAGAGGAGTCAAATGA+GGG | + | chr3.2:74190018-74190037 | MS.gene79098:intron | 35.0% | |
| ACATCTTCAGCATATTCACT+TGG | - | chr3.2:74192631-74192650 | None:intergenic | 35.0% | |
| ACATGTGAGTATGAGAGATA+GGG | + | chr3.2:74191515-74191534 | MS.gene79098:intron | 35.0% | |
| AGTAAAAGATTCCCTCATAG+TGG | + | chr3.2:74192676-74192695 | MS.gene79098:CDS | 35.0% | |
| ATCGTGCCTAACATATTAAG+GGG | + | chr3.2:74189954-74189973 | MS.gene79098:intron | 35.0% | |
| ATGACATCTTCAGTGATTGA+GGG | + | chr3.2:74188996-74189015 | MS.gene79098:CDS | 35.0% | |
| ATGGACAGAAAAGACTAATG+CGG | - | chr3.2:74190916-74190935 | None:intergenic | 35.0% | |
| ATGGGTAATTTCCACTATGA+GGG | - | chr3.2:74192690-74192709 | None:intergenic | 35.0% | |
| ATTGGACCACTAATGTCTAA+TGG | + | chr3.2:74192097-74192116 | MS.gene79098:intron | 35.0% | |
| ATTGGTTGCGATCTCTAATT+TGG | - | chr3.2:74191070-74191089 | None:intergenic | 35.0% | |
| CAATCACAAGAAGAGAACAT+TGG | - | chr3.2:74191449-74191468 | None:intergenic | 35.0% | |
| CAATGTTCTCTTCTTGTGAT+TGG | + | chr3.2:74191447-74191466 | MS.gene79098:intron | 35.0% | |
| CCACACTCATTAAGTCATTA+TGG | + | chr3.2:74191617-74191636 | MS.gene79098:intron | 35.0% | |
| CCATAATGACTTAATGAGTG+TGG | - | chr3.2:74191620-74191639 | None:intergenic | 35.0% | |
| CGGATGGTATAATTCTCTTT+GGG | + | chr3.2:74189788-74189807 | MS.gene79098:intron | 35.0% | |
| CTAATTTGGGCTGAAGAATT+GGG | - | chr3.2:74191056-74191075 | None:intergenic | 35.0% | |
| CTGAAGAATTGGGAAAAACA+TGG | - | chr3.2:74191046-74191065 | None:intergenic | 35.0% | |
| CTTTATTGCAGGGTTCATAT+TGG | - | chr3.2:74191300-74191319 | None:intergenic | 35.0% | |
| GAAATTACCCATCAAGTGAA+GGG | + | chr3.2:74192698-74192717 | MS.gene79098:CDS | 35.0% | |
| GAACCCTGCAATAAAGATAA+GGG | + | chr3.2:74191304-74191323 | MS.gene79098:intron | 35.0% | |
| GAATATGCTGAAGATGTCAA+GGG | + | chr3.2:74192634-74192653 | MS.gene79098:CDS | 35.0% | |
| GATATCCCATTAGACATTAG+TGG | - | chr3.2:74192106-74192125 | None:intergenic | 35.0% | |
| GATCGTGCCTAACATATTAA+GGG | + | chr3.2:74189953-74189972 | MS.gene79098:intron | 35.0% | |
| GCCAATACTGCATCAATAAT+AGG | - | chr3.2:74192481-74192500 | None:intergenic | 35.0% | |
| GCCTATTATTGATGCAGTAT+TGG | + | chr3.2:74192477-74192496 | MS.gene79098:CDS | 35.0% | |
| GCTAACATATAAAACTCAGG+AGG | + | chr3.2:74191106-74191125 | MS.gene79098:intron | 35.0% | |
| GTGGTCACAATTCACAAATA+TGG | - | chr3.2:74192071-74192090 | None:intergenic | 35.0% | |
| TAATTGAGAGGAGTCAAATG+AGG | + | chr3.2:74190017-74190036 | MS.gene79098:intron | 35.0% | |
| TAGTGACTACATTCTACCTT+AGG | + | chr3.2:74189919-74189938 | MS.gene79098:intron | 35.0% | |
| TCTAATTTGGGCTGAAGAAT+TGG | - | chr3.2:74191057-74191076 | None:intergenic | 35.0% | |
| TCTATCAATATTGTGTCCCT+TGG | - | chr3.2:74189876-74189895 | None:intergenic | 35.0% | |
| TGAACCCTGCAATAAAGATA+AGG | + | chr3.2:74191303-74191322 | MS.gene79098:intron | 35.0% | |
| TGAATATGCTGAAGATGTCA+AGG | + | chr3.2:74192633-74192652 | MS.gene79098:CDS | 35.0% | |
| TTATAGATGGTGTGTAGTTG+AGG | + | chr3.2:74191381-74191400 | MS.gene79098:intron | 35.0% | |
| TTGGACCACTAATGTCTAAT+GGG | + | chr3.2:74192098-74192117 | MS.gene79098:intron | 35.0% | |
| TTGGTTGCGATCTCTAATTT+GGG | - | chr3.2:74191069-74191088 | None:intergenic | 35.0% | |
| TTTATATGTTAGCTCAGACG+AGG | - | chr3.2:74191099-74191118 | None:intergenic | 35.0% | |
| TTTGAAAGACTACCATTTGC+AGG | - | chr3.2:74192944-74192963 | None:intergenic | 35.0% | |
| ! | ACGAAAATTGATAACACCTC+CGG | + | chr3.2:74193015-74193034 | MS.gene79098:intron | 35.0% |
| ! | AGTATTGAAATTATGGGTGC+AGG | + | chr3.2:74189347-74189366 | MS.gene79098:intron | 35.0% |
| ! | AGTCTTTTCTGTCCATCAAT+AGG | + | chr3.2:74190920-74190939 | MS.gene79098:intron | 35.0% |
| ! | GTAGAGTGAAAGAAAAGCAT+AGG | - | chr3.2:74193169-74193188 | None:intergenic | 35.0% |
| ! | TAACTTGTCTTCATGGTTTG+TGG | + | chr3.2:74192831-74192850 | MS.gene79098:intron | 35.0% |
| ! | TGCTTTTAATGATGTGTAGG+TGG | + | chr3.2:74192306-74192325 | MS.gene79098:intron | 35.0% |
| ! | TTAGTGGTCCAATTTTCATG+TGG | - | chr3.2:74192090-74192109 | None:intergenic | 35.0% |
| !! | ACAATTAAGTTGATGAACGG+TGG | - | chr3.2:74190129-74190148 | None:intergenic | 35.0% |
| !! | AGATCCATGCGAATTTGTTT+TGG | - | chr3.2:74191184-74191203 | None:intergenic | 35.0% |
| !! | AGTAAAGTAAAGAGTACCTG+AGG | - | chr3.2:74189542-74189561 | None:intergenic | 35.0% |
| !! | ATTATTGATGCAGTATTGGC+CGG | + | chr3.2:74192481-74192500 | MS.gene79098:CDS | 35.0% |
| !! | GTAAAGTAAAGAGTACCTGA+GGG | - | chr3.2:74189541-74189560 | None:intergenic | 35.0% |
| !! | TAAGGACTTGGTGTTATGTT+CGG | + | chr3.2:74189479-74189498 | MS.gene79098:CDS | 35.0% |
| !! | TTTTTGGTGATCAAATCCGA+AGG | - | chr3.2:74189047-74189066 | None:intergenic | 35.0% |
| AAAAGCTGCAATCTCTCTCA+AGG | + | chr3.2:74189115-74189134 | MS.gene79098:CDS | 40.0% | |
| AAATGTTAACCAATGCCTCC+GGG | + | chr3.2:74190193-74190212 | MS.gene79098:intron | 40.0% | |
| AAGTATATGTGCTATGCGGA+TGG | + | chr3.2:74189772-74189791 | MS.gene79098:intron | 40.0% | |
| ACTTGAAGAGCAAGTTGTTG+CGG | + | chr3.2:74193269-74193288 | MS.gene79098:CDS | 40.0% | |
| AGCTGTGGTTGCTAATTACA+TGG | + | chr3.2:74191720-74191739 | MS.gene79098:CDS | 40.0% | |
| AGTGAAAGATTTCCAACCGT+AGG | - | chr3.2:74189077-74189096 | None:intergenic | 40.0% | |
| ATGATGAATGTTGACACAGC+AGG | - | chr3.2:74192199-74192218 | None:intergenic | 40.0% | |
| ATGCGGATAAGTATGATCTC+TGG | - | chr3.2:74190778-74190797 | None:intergenic | 40.0% | |
| ATGCTAAATTCGTACACGCA+AGG | - | chr3.2:74189622-74189641 | None:intergenic | 40.0% | |
| ATGCTCGTGCTTCATTATTC+AGG | + | chr3.2:74191829-74191848 | MS.gene79098:intron | 40.0% | |
| ATTCCGATAGCGTAACTTTC+AGG | + | chr3.2:74189821-74189840 | MS.gene79098:intron | 40.0% | |
| ATTGAAATTATGGGTGCAGG+TGG | + | chr3.2:74189350-74189369 | MS.gene79098:intron | 40.0% | |
| ATTGATCCAACGGTGTATAC+TGG | + | chr3.2:74189402-74189421 | MS.gene79098:CDS | 40.0% | |
| ATTTACTCCTGTTCTGTCCA+AGG | + | chr3.2:74189856-74189875 | MS.gene79098:intron | 40.0% | |
| CAAGAGATAAGTTAGTGCAG+TGG | + | chr3.2:74192725-74192744 | MS.gene79098:CDS | 40.0% | |
| CACATGTGAGTATGAGAGAT+AGG | + | chr3.2:74191514-74191533 | MS.gene79098:intron | 40.0% | |
| CACTGCACTAACTTATCTCT+TGG | - | chr3.2:74192727-74192746 | None:intergenic | 40.0% | |
| CACTTGGAAGTGGAAAATGA+AGG | - | chr3.2:74192615-74192634 | None:intergenic | 40.0% | |
| CCATGAATAGACCCAAAAAC+AGG | - | chr3.2:74191765-74191784 | None:intergenic | 40.0% | |
| CTCCGGATATATTTGTTTGC+AGG | + | chr3.2:74193032-74193051 | MS.gene79098:intron | 40.0% | |
| CTGCAAACAAATATATCCGG+AGG | - | chr3.2:74193034-74193053 | None:intergenic | 40.0% | |
| CTGTGGTTGCTAATTACATG+GGG | + | chr3.2:74191722-74191741 | MS.gene79098:CDS | 40.0% | |
| GAAATGTTAACCAATGCCTC+CGG | + | chr3.2:74190192-74190211 | MS.gene79098:intron | 40.0% | |
| GAATTGGTAAAGTGGGAAGA+AGG | - | chr3.2:74190991-74191010 | None:intergenic | 40.0% | |
| GAGAGAAGTGATTGATCCAA+CGG | + | chr3.2:74189392-74189411 | MS.gene79098:CDS | 40.0% | |
| GATGGGTAATTTCCACTATG+AGG | - | chr3.2:74192691-74192710 | None:intergenic | 40.0% | |
| GCGGATGGTATAATTCTCTT+TGG | + | chr3.2:74189787-74189806 | MS.gene79098:intron | 40.0% | |
| GCTGTGGTTGCTAATTACAT+GGG | + | chr3.2:74191721-74191740 | MS.gene79098:CDS | 40.0% | |
| GGAAATTACCCATCAAGTGA+AGG | + | chr3.2:74192697-74192716 | MS.gene79098:CDS | 40.0% | |
| GGATCCAAAACAAATTCGCA+TGG | + | chr3.2:74191177-74191196 | MS.gene79098:intron | 40.0% | |
| GGATCGTGCCTAACATATTA+AGG | + | chr3.2:74189952-74189971 | MS.gene79098:intron | 40.0% | |
| GGGGAAGTTGTATGGAAAAA+TGG | + | chr3.2:74193099-74193118 | MS.gene79098:CDS | 40.0% | |
| GGTCCCTTATCTTTATTGCA+GGG | - | chr3.2:74191310-74191329 | None:intergenic | 40.0% | |
| GTATGATAAAGCTAGAGCTC+TGG | + | chr3.2:74193245-74193264 | MS.gene79098:CDS | 40.0% | |
| TCAGCATATTCACTTGGAAG+TGG | - | chr3.2:74192625-74192644 | None:intergenic | 40.0% | |
| TGATTGCACCTGATAACTCT+AGG | + | chr3.2:74193352-74193371 | MS.gene79098:CDS | 40.0% | |
| TGCATTCGTGATGCTCTTTA+AGG | + | chr3.2:74190645-74190664 | MS.gene79098:intron | 40.0% | |
| TGTGGGGATAATGCTTTGAT+GGG | + | chr3.2:74190087-74190106 | MS.gene79098:intron | 40.0% | |
| TGTGGTTGCTAATTACATGG+GGG | + | chr3.2:74191723-74191742 | MS.gene79098:CDS | 40.0% | |
| TTCGCTCCCCTTAATATGTT+AGG | - | chr3.2:74189963-74189982 | None:intergenic | 40.0% | |
| TTGCAAGGAAATGACTAACG+TGG | + | chr3.2:74191224-74191243 | MS.gene79098:intron | 40.0% | |
| TTGCCTGAAAGTTACGCTAT+CGG | - | chr3.2:74189827-74189846 | None:intergenic | 40.0% | |
| TTGGATTCCCTTCACTTGAT+GGG | - | chr3.2:74192708-74192727 | None:intergenic | 40.0% | |
| TTGTGGGGATAATGCTTTGA+TGG | + | chr3.2:74190086-74190105 | MS.gene79098:intron | 40.0% | |
| TTGTTCCTAAACAAGCACCT+AGG | + | chr3.2:74192424-74192443 | MS.gene79098:CDS | 40.0% | |
| TTGTTTGCTTTGTAGCACGA+AGG | + | chr3.2:74189182-74189201 | MS.gene79098:intron | 40.0% | |
| TTTACTCCTGTTCTGTCCAA+GGG | + | chr3.2:74189857-74189876 | MS.gene79098:intron | 40.0% | |
| ! | GCAGGTTTTTCCAAATGACA+GGG | + | chr3.2:74193050-74193069 | MS.gene79098:intron | 40.0% |
| ! | TACATTGTCTAAAGCAGCAC+AGG | + | chr3.2:74192774-74192793 | MS.gene79098:CDS | 40.0% |
| ! | TGCAGGTTTTTCCAAATGAC+AGG | + | chr3.2:74193049-74193068 | MS.gene79098:intron | 40.0% |
| !! | ATTAAGTTGATGAACGGTGG+CGG | - | chr3.2:74190126-74190145 | None:intergenic | 40.0% |
| !! | CAAAAGCGTGACCTGTTTTT+GGG | + | chr3.2:74191751-74191770 | MS.gene79098:CDS | 40.0% |
| !!! | CCTGTTTTTGGGTCTATTCA+TGG | + | chr3.2:74191762-74191781 | MS.gene79098:CDS | 40.0% |
| !!! | GTTTTTGGGTCTATTCATGG+AGG | + | chr3.2:74191765-74191784 | MS.gene79098:CDS | 40.0% |
| AAGTTAGTGCAGTGGAGTCA+TGG | + | chr3.2:74192733-74192752 | MS.gene79098:CDS | 45.0% | |
| AATGGCTACTCTCTCTTCCA+TGG | + | chr3.2:74193297-74193316 | MS.gene79098:CDS | 45.0% | |
| AATGTTAACCAATGCCTCCG+GGG | + | chr3.2:74190194-74190213 | MS.gene79098:intron | 45.0% | |
| AATGTTGACACAGCAGGATG+TGG | - | chr3.2:74192193-74192212 | None:intergenic | 45.0% | |
| ACATCTTCAGTGATTGAGGG+TGG | + | chr3.2:74188999-74189018 | MS.gene79098:CDS | 45.0% | |
| ACTGTCCGTTGATGTATCGA+TGG | + | chr3.2:74192533-74192552 | MS.gene79098:CDS | 45.0% | |
| AGATGCAGCAATAGAAGCAG+GGG | + | chr3.2:74193080-74193099 | MS.gene79098:CDS | 45.0% | |
| AGGTACTTAGGTGCAGCAAA+TGG | + | chr3.2:74192565-74192584 | MS.gene79098:CDS | 45.0% | |
| ATCGTTGAACAATGGTGCAG+AGG | + | chr3.2:74191153-74191172 | MS.gene79098:intron | 45.0% | |
| ATGTTGACACAGCAGGATGT+GGG | - | chr3.2:74192192-74192211 | None:intergenic | 45.0% | |
| CCTGATAACTCTAGGTTTCC+AGG | + | chr3.2:74193360-74193379 | MS.gene79098:CDS | 45.0% | |
| CCTGGAAACCTAGAGTTATC+AGG | - | chr3.2:74193363-74193382 | None:intergenic | 45.0% | |
| CGGATAAGTATGATCTCTGG+AGG | - | chr3.2:74190775-74190794 | None:intergenic | 45.0% | |
| CGGTCCCTTATCTTTATTGC+AGG | - | chr3.2:74191311-74191330 | None:intergenic | 45.0% | |
| CTTCACCTAGGTGCTTGTTT+AGG | - | chr3.2:74192432-74192451 | None:intergenic | 45.0% | |
| CTTGGATTCCCTTCACTTGA+TGG | - | chr3.2:74192709-74192728 | None:intergenic | 45.0% | |
| GAAGCACGAGCATAGAAAGT+GGG | - | chr3.2:74191822-74191841 | None:intergenic | 45.0% | |
| GAGATGCAGCAATAGAAGCA+GGG | + | chr3.2:74193079-74193098 | MS.gene79098:CDS | 45.0% | |
| GCACATGAAGAATACCAGCA+AGG | - | chr3.2:74192591-74192610 | None:intergenic | 45.0% | |
| TAGAAGCAGGGGAAGTTGTA+TGG | + | chr3.2:74193091-74193110 | MS.gene79098:CDS | 45.0% | |
| TCTACCTTAGGACTCGATAG+CGG | + | chr3.2:74189931-74189950 | MS.gene79098:intron | 45.0% | |
| TCTCGTAGTTCCCTGTCATT+TGG | - | chr3.2:74193063-74193082 | None:intergenic | 45.0% | |
| TGAAGCACGAGCATAGAAAG+TGG | - | chr3.2:74191823-74191842 | None:intergenic | 45.0% | |
| TGAGGCTATACATGAGCCTT+CGG | + | chr3.2:74189028-74189047 | MS.gene79098:CDS | 45.0% | |
| TGGACACTGTATCTTCACCT+AGG | - | chr3.2:74192444-74192463 | None:intergenic | 45.0% | |
| TGGTGGAGGTGAATTGGAAT+CGG | + | chr3.2:74189370-74189389 | MS.gene79098:CDS | 45.0% | |
| TTAGGAACAATGCAGCCCAT+AGG | - | chr3.2:74192414-74192433 | None:intergenic | 45.0% | |
| TTATGTTAACCGATGCCCCT+GGG | - | chr3.2:74190338-74190357 | None:intergenic | 45.0% | |
| ! | AAAACAGGTCACGCTTTTGG+AGG | - | chr3.2:74191750-74191769 | None:intergenic | 45.0% |
| ! | ACTTTTCTGTGTGGTAGAGG+AGG | + | chr3.2:74191682-74191701 | MS.gene79098:CDS | 45.0% |
| ! | AGACACGTGACTTTTCTGTG+TGG | + | chr3.2:74191673-74191692 | MS.gene79098:intron | 45.0% |
| ! | CCAAAAACAGGTCACGCTTT+TGG | - | chr3.2:74191753-74191772 | None:intergenic | 45.0% |
| ! | GCGGAAGTATATGTGCTATG+CGG | + | chr3.2:74189768-74189787 | MS.gene79098:intron | 45.0% |
| ! | GTGACTTTTCTGTGTGGTAG+AGG | + | chr3.2:74191679-74191698 | MS.gene79098:CDS | 45.0% |
| !! | AAGAAAGTGGGACTTGCTGA+TGG | + | chr3.2:74193129-74193148 | MS.gene79098:CDS | 45.0% |
| !! | CCAAAAGCGTGACCTGTTTT+TGG | + | chr3.2:74191750-74191769 | MS.gene79098:CDS | 45.0% |
| !! | GTATACTGGCTTGCTTGGTA+CGG | + | chr3.2:74189416-74189435 | MS.gene79098:CDS | 45.0% |
| !!! | ATTTTAAATAATAAGTTTTT+AGG | - | chr3.2:74190741-74190760 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTAATAGAAAAA+AGG | + | chr3.2:74191347-74191366 | MS.gene79098:intron | 5.0% |
| AGCAAGCCAGTATACACCGT+TGG | - | chr3.2:74189411-74189430 | None:intergenic | 50.0% | |
| AGTGGAGTCATGGTGCAACT+GGG | + | chr3.2:74192743-74192762 | MS.gene79098:CDS | 50.0% | |
| ATCCCAAAACCACCTTCCTC+GGG | - | chr3.2:74192358-74192377 | None:intergenic | 50.0% | |
| CAAGTTGTTGCGGATGGCAA+TGG | + | chr3.2:74193279-74193298 | MS.gene79098:CDS | 50.0% | |
| CATCCCAAAACCACCTTCCT+CGG | - | chr3.2:74192359-74192378 | None:intergenic | 50.0% | |
| CCGTGCCATCGATACATCAA+CGG | - | chr3.2:74192541-74192560 | None:intergenic | 50.0% | |
| CGAGATGCAGCAATAGAAGC+AGG | + | chr3.2:74193078-74193097 | MS.gene79098:CDS | 50.0% | |
| CTTCCTTAACCAGTTCCCAG+GGG | + | chr3.2:74190320-74190339 | MS.gene79098:intron | 50.0% | |
| GAAATTATGGGTGCAGGTGG+TGG | + | chr3.2:74189353-74189372 | MS.gene79098:intron | 50.0% | |
| GAAGAGCAAGTTGTTGCGGA+TGG | + | chr3.2:74193273-74193292 | MS.gene79098:CDS | 50.0% | |
| GAGAGGAGTCAAATGAGGGA+GGG | + | chr3.2:74190022-74190041 | MS.gene79098:intron | 50.0% | |
| GATCTTCTATACGGACGAGC+TGG | + | chr3.2:74192385-74192404 | MS.gene79098:CDS | 50.0% | |
| GCTCAGACGAGGAAGAAGAT+TGG | - | chr3.2:74191088-74191107 | None:intergenic | 50.0% | |
| GCTTCCTTAACCAGTTCCCA+GGG | + | chr3.2:74190319-74190338 | MS.gene79098:intron | 50.0% | |
| GTTATGTTAACCGATGCCCC+TGG | - | chr3.2:74190339-74190358 | None:intergenic | 50.0% | |
| GTTGAACAATGGTGCAGAGG+TGG | + | chr3.2:74191156-74191175 | MS.gene79098:intron | 50.0% | |
| TCTCTCTTCCATGGACTTGC+TGG | + | chr3.2:74193306-74193325 | MS.gene79098:CDS | 50.0% | |
| TGAGAGGAGTCAAATGAGGG+AGG | + | chr3.2:74190021-74190040 | MS.gene79098:intron | 50.0% | |
| TGCAATCTCTCTCAAGGACG+AGG | + | chr3.2:74189121-74189140 | MS.gene79098:CDS | 50.0% | |
| TGTTGACACAGCAGGATGTG+GGG | - | chr3.2:74192191-74192210 | None:intergenic | 50.0% | |
| TTGCTGGGACAGCATGTCTT+TGG | + | chr3.2:74193322-74193341 | MS.gene79098:CDS | 50.0% | |
| TTGTGTCCCTTGGACAGAAC+AGG | - | chr3.2:74189866-74189885 | None:intergenic | 50.0% | |
| ! | CCGTTGATGTATCGATGGCA+CGG | + | chr3.2:74192538-74192557 | MS.gene79098:CDS | 50.0% |
| ! | CGTTGATGTATCGATGGCAC+GGG | + | chr3.2:74192539-74192558 | MS.gene79098:CDS | 50.0% |
| ! | CTCTCTTCCATGGACTTGCT+GGG | + | chr3.2:74193307-74193326 | MS.gene79098:CDS | 50.0% |
| !! | ACGGTGTATACTGGCTTGCT+TGG | + | chr3.2:74189411-74189430 | MS.gene79098:CDS | 50.0% |
| !! | ATTGATGCAGTATTGGCCGG+CGG | + | chr3.2:74192484-74192503 | MS.gene79098:CDS | 50.0% |
| ACGGACGAGCTGGATTCCTA+TGG | + | chr3.2:74192395-74192414 | MS.gene79098:CDS | 55.0% | |
| ATGCCCCTGGGAACTGGTTA+AGG | - | chr3.2:74190326-74190345 | None:intergenic | 55.0% | |
| ATGCTGTCCCAGCAAGTCCA+TGG | - | chr3.2:74193317-74193336 | None:intergenic | 55.0% | |
| CACCAAGTCCTTATGGCAGC+CGG | - | chr3.2:74189472-74189491 | None:intergenic | 55.0% | |
| CAGTGGAGTCATGGTGCAAC+TGG | + | chr3.2:74192742-74192761 | MS.gene79098:CDS | 55.0% | |
| CGATCCGCTATCGAGTCCTA+AGG | - | chr3.2:74189938-74189957 | None:intergenic | 55.0% | |
| CGGACGAGCTGGATTCCTAT+GGG | + | chr3.2:74192396-74192415 | MS.gene79098:CDS | 55.0% | |
| CTGCGATCGTACGAGGTTAC+CGG | + | chr3.2:74189450-74189469 | MS.gene79098:CDS | 55.0% | |
| GAGTCATGGTGCAACTGGGA+TGG | + | chr3.2:74192747-74192766 | MS.gene79098:CDS | 55.0% | |
| GATTGAGGGTGGACACGATG+AGG | + | chr3.2:74189010-74189029 | MS.gene79098:CDS | 55.0% | |
| GGCTTCCTTAACCAGTTCCC+AGG | + | chr3.2:74190318-74190337 | MS.gene79098:intron | 55.0% | |
| TTGTAGCACGAAGGCGAGTC+TGG | + | chr3.2:74189191-74189210 | MS.gene79098:intron | 55.0% | |
| ! | ATTATGGGTGCAGGTGGTGG+AGG | + | chr3.2:74189356-74189375 | MS.gene79098:intron | 55.0% |
| ! | GACCCGAGGAAGGTGGTTTT+GGG | + | chr3.2:74192353-74192372 | MS.gene79098:CDS | 55.0% |
| ! | TAACCAGTTCCCAGGGGCAT+CGG | + | chr3.2:74190326-74190345 | MS.gene79098:intron | 55.0% |
| ! | TACCGGCTGCCATAAGGACT+TGG | + | chr3.2:74189467-74189486 | MS.gene79098:CDS | 55.0% |
| !! | GGACTTGCTGATGGCGTATC+TGG | + | chr3.2:74193138-74193157 | MS.gene79098:CDS | 55.0% |
| !! | TGCAGGTGGTGGAGGTGAAT+TGG | + | chr3.2:74189364-74189383 | MS.gene79098:intron | 55.0% |
| AACGAGAGAGCCCTGCCTGT+TGG | + | chr3.2:74192331-74192350 | MS.gene79098:CDS | 60.0% | |
| AGAGGAGGCCTATACGCGCT+TGG | + | chr3.2:74191697-74191716 | MS.gene79098:CDS | 60.0% | |
| CACTTGCCTGCGATCGTACG+AGG | + | chr3.2:74189443-74189462 | MS.gene79098:CDS | 60.0% | |
| CCACAGCTCCAAGCGCGTAT+AGG | - | chr3.2:74191708-74191727 | None:intergenic | 60.0% | |
| CCTATACGCGCTTGGAGCTG+TGG | + | chr3.2:74191705-74191724 | MS.gene79098:CDS | 60.0% | |
| CGGTAACCTCGTACGATCGC+AGG | - | chr3.2:74189452-74189471 | None:intergenic | 60.0% | |
| CTGTTGCACGTGACTCCCTC+AGG | + | chr3.2:74189523-74189542 | MS.gene79098:CDS | 60.0% | |
| GAGGGAGTCACGTGCAACAG+TGG | - | chr3.2:74189523-74189542 | None:intergenic | 60.0% | |
| TAACCGATGCCCCTGGGAAC+TGG | - | chr3.2:74190332-74190351 | None:intergenic | 60.0% | |
| TGCTCCTTTAACCGGTGCCC+CGG | - | chr3.2:74190214-74190233 | None:intergenic | 60.0% | |
| TTCCTCGGGTCCAACAGGCA+GGG | - | chr3.2:74192344-74192363 | None:intergenic | 60.0% | |
| ! | CGAGGTTACCGGCTGCCATA+AGG | + | chr3.2:74189461-74189480 | MS.gene79098:CDS | 60.0% |
| ! | GGACCCGAGGAAGGTGGTTT+TGG | + | chr3.2:74192352-74192371 | MS.gene79098:CDS | 60.0% |
| ! | GGTGCAGCAAATGGCCTTGC+TGG | + | chr3.2:74192574-74192593 | MS.gene79098:CDS | 60.0% |
| ! | TGGCACGGGACGAGGTACTT+AGG | + | chr3.2:74192553-74192572 | MS.gene79098:CDS | 60.0% |
| ! | TGTATCGATGGCACGGGACG+AGG | + | chr3.2:74192545-74192564 | MS.gene79098:CDS | 60.0% |
| AACCAATGCCTCCGGGGCAC+CGG | + | chr3.2:74190200-74190219 | MS.gene79098:intron | 65.0% | |
| AGACGCTCCTGCTCTACCGC+CGG | - | chr3.2:74192503-74192522 | None:intergenic | 65.0% | |
| CCACCTTCCTCGGGTCCAAC+AGG | - | chr3.2:74192349-74192368 | None:intergenic | 65.0% | |
| CCTGTTGGACCCGAGGAAGG+TGG | + | chr3.2:74192346-74192365 | MS.gene79098:CDS | 65.0% | |
| CTGCCTGTTGGACCCGAGGA+AGG | + | chr3.2:74192343-74192362 | MS.gene79098:CDS | 65.0% | |
| CTTCCTCGGGTCCAACAGGC+AGG | - | chr3.2:74192345-74192364 | None:intergenic | 65.0% | |
| GCAGGATGTGGGGCAGTGTG+TGG | - | chr3.2:74192181-74192200 | None:intergenic | 65.0% | |
| TCCTTTAACCGGTGCCCCGG+AGG | - | chr3.2:74190211-74190230 | None:intergenic | 65.0% | |
| ! | GTATTGGCCGGCGGTAGAGC+AGG | + | chr3.2:74192493-74192512 | MS.gene79098:CDS | 65.0% |
| AGCCCTGCCTGTTGGACCCG+AGG | + | chr3.2:74192339-74192358 | MS.gene79098:CDS | 70.0% | |
| ! | AACCGGTGCCCCGGAGGCAT+TGG | - | chr3.2:74190205-74190224 | None:intergenic | 70.0% |
| !! | GCCTCCGGGGCACCGGTTAA+AGG | + | chr3.2:74190207-74190226 | MS.gene79098:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74188996 | 74193395 | 74188996 | ID=MS.gene79098 |
| chr3.2 | mRNA | 74188996 | 74193395 | 74188996 | ID=MS.gene79098.t1;Parent=MS.gene79098 |
| chr3.2 | exon | 74188996 | 74189142 | 74188996 | ID=MS.gene79098.t1.exon1;Parent=MS.gene79098.t1 |
| chr3.2 | CDS | 74188996 | 74189142 | 74188996 | ID=cds.MS.gene79098.t1;Parent=MS.gene79098.t1 |
| chr3.2 | exon | 74189369 | 74189544 | 74189369 | ID=MS.gene79098.t1.exon2;Parent=MS.gene79098.t1 |
| chr3.2 | CDS | 74189369 | 74189544 | 74189369 | ID=cds.MS.gene79098.t1;Parent=MS.gene79098.t1 |
| chr3.2 | exon | 74191675 | 74191786 | 74191675 | ID=MS.gene79098.t1.exon3;Parent=MS.gene79098.t1 |
| chr3.2 | CDS | 74191675 | 74191786 | 74191675 | ID=cds.MS.gene79098.t1;Parent=MS.gene79098.t1 |
| chr3.2 | exon | 74192325 | 74192795 | 74192325 | ID=MS.gene79098.t1.exon4;Parent=MS.gene79098.t1 |
| chr3.2 | CDS | 74192325 | 74192795 | 74192325 | ID=cds.MS.gene79098.t1;Parent=MS.gene79098.t1 |
| chr3.2 | exon | 74193054 | 74193395 | 74193054 | ID=MS.gene79098.t1.exon5;Parent=MS.gene79098.t1 |
| chr3.2 | CDS | 74193054 | 74193395 | 74193054 | ID=cds.MS.gene79098.t1;Parent=MS.gene79098.t1 |
| Gene Sequence |
| Protein sequence |
