Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84700.t1 | XP_003601926.1 | 97.8 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 9.80E-240 | 839 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84700.t1 | Q9FJN7 | 66.5 | 409 | 124 | 3 | 16 | 415 | 29 | 433 | 8.6e-160 | 564.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84700.t1 | G7J384 | 97.8 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 7.1e-240 | 839.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84700 | MS.gene059857 | PPI |
| MS.gene031394 | MS.gene84700 | PPI |
| MS.gene065179 | MS.gene84700 | PPI |
| MS.gene84700 | MS.gene068489 | PPI |
| MS.gene84700 | MS.gene069370 | PPI |
| MS.gene073261 | MS.gene84700 | PPI |
| MS.gene98661 | MS.gene84700 | PPI |
| MS.gene84700 | MS.gene84419 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84700.t1 | MTR_3g086910 | 97.831 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 0.0 | 834 |
| MS.gene84700.t1 | MTR_3g086910 | 96.774 | 310 | 7 | 1 | 1 | 307 | 1 | 310 | 0.0 | 616 |
| MS.gene84700.t1 | MTR_2g079700 | 48.462 | 390 | 180 | 7 | 32 | 415 | 43 | 417 | 7.07e-117 | 347 |
| MS.gene84700.t1 | MTR_6g007490 | 47.258 | 383 | 184 | 7 | 36 | 415 | 74 | 441 | 1.43e-112 | 337 |
| MS.gene84700.t1 | MTR_6g007490 | 45.588 | 272 | 131 | 6 | 36 | 304 | 74 | 331 | 2.94e-71 | 228 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84700.t1 | AT5G65280 | 66.341 | 410 | 123 | 4 | 16 | 415 | 29 | 433 | 0.0 | 557 |
| MS.gene84700.t1 | AT5G65280 | 70.779 | 308 | 89 | 1 | 108 | 415 | 5 | 311 | 3.04e-161 | 456 |
| MS.gene84700.t1 | AT1G52920 | 46.247 | 413 | 194 | 8 | 9 | 415 | 20 | 410 | 5.79e-117 | 347 |
| MS.gene84700.t1 | AT2G20770 | 43.521 | 409 | 204 | 9 | 19 | 415 | 12 | 405 | 3.03e-102 | 310 |
Find 114 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCCGAGGAAGGTGGTTT+TGG | 0.220436 | 3.4:+80884096 | MS.gene84700:CDS |
| TCTCTCTTCCATGGACTTGC+TGG | 0.235781 | 3.4:+80885050 | MS.gene84700:CDS |
| CTCTTCATATATAATATCTT+TGG | 0.254651 | 3.4:-80884940 | None:intergenic |
| AATAGGCATTAGAATGTCTT+TGG | 0.278410 | 3.4:-80884205 | None:intergenic |
| TTGCTGGGACAGCATGTCTT+TGG | 0.279695 | 3.4:+80885066 | MS.gene84700:CDS |
| GGACTTGCTGATGGCGTATC+TGG | 0.310070 | 3.4:+80884882 | MS.gene84700:CDS |
| CTTGGATTCCCTTCACTTGA+TGG | 0.315242 | 3.4:-80884450 | None:intergenic |
| CCTGATAACTCTAGGTTTCC+AGG | 0.320293 | 3.4:+80885104 | MS.gene84700:CDS |
| CTTCACCTAGGTGCTTGTTT+AGG | 0.331466 | 3.4:-80884173 | None:intergenic |
| TGCAGGTGGTGGAGGTGAAT+TGG | 0.334822 | 3.4:+80881298 | MS.gene84700:intron |
| GGTGCAGCAAATGGCCTTGC+TGG | 0.355829 | 3.4:+80884318 | MS.gene84700:CDS |
| GCCAATACTGCATCAATAAT+AGG | 0.367653 | 3.4:-80884222 | None:intergenic |
| AACATAACACCAAGTCCTTA+TGG | 0.371568 | 3.4:-80881410 | None:intergenic |
| ACGGTGTATACTGGTTTGTT+TGG | 0.375952 | 3.4:+80881345 | MS.gene84700:CDS |
| TCTCGTAGTTCCCTGTCATT+TGG | 0.377720 | 3.4:-80884804 | None:intergenic |
| ATTGATCCAACGGTGTATAC+TGG | 0.383751 | 3.4:+80881336 | MS.gene84700:CDS |
| CACTGCACTAACTTATCTCT+TGG | 0.393063 | 3.4:-80884468 | None:intergenic |
| CCTGGAAACCTAGAGTTATC+AGG | 0.393064 | 3.4:-80885104 | None:intergenic |
| CAGTGGAGTCATGGTGCAAC+TGG | 0.395385 | 3.4:+80884486 | MS.gene84700:CDS |
| GCCTATTATTGATGCAGTAT+TGG | 0.402086 | 3.4:+80884221 | MS.gene84700:CDS |
| ATGTCATATGATCTTCTATA+CGG | 0.404747 | 3.4:+80884120 | MS.gene84700:CDS |
| CTTCCTCGGGTCCAACAGGC+AGG | 0.407249 | 3.4:-80884086 | None:intergenic |
| CTGAGATCGTACGAGGTAAC+CGG | 0.414070 | 3.4:+80881384 | MS.gene84700:CDS |
| CCACCTTCCTCGGGTCCAAC+AGG | 0.414679 | 3.4:-80884090 | None:intergenic |
| CCACAGCTCCAAGCGCGTAT+AGG | 0.417923 | 3.4:-80883449 | None:intergenic |
| CGGTTACCTCGTACGATCTC+AGG | 0.419788 | 3.4:-80881383 | None:intergenic |
| AGCTGTGGTTGCTAATTACA+TGG | 0.432341 | 3.4:+80883464 | MS.gene84700:CDS |
| CTCTCTTCCATGGACTTGCT+GGG | 0.435404 | 3.4:+80885051 | MS.gene84700:CDS |
| TTGGATTCCCTTCACTTGAT+GGG | 0.439227 | 3.4:-80884449 | None:intergenic |
| ACGGACGAGCTGGATTCCTA+TGG | 0.441906 | 3.4:+80884139 | MS.gene84700:CDS |
| CATCCCAAAACCACCTTCCT+CGG | 0.449304 | 3.4:-80884100 | None:intergenic |
| TAAGGACTTGGTGTTATGTT+CGG | 0.453008 | 3.4:+80881413 | MS.gene84700:CDS |
| GTATTGGCCGGCGGTAGAGC+AGG | 0.456868 | 3.4:+80884237 | MS.gene84700:CDS |
| CACCAAGTCCTTATGGCAAC+CGG | 0.460114 | 3.4:-80881403 | None:intergenic |
| TAGAAGCAGGGGAAGTTGTA+TGG | 0.466075 | 3.4:+80884835 | MS.gene84700:CDS |
| GATGGGTAATTTCCACTATG+AGG | 0.467624 | 3.4:-80884432 | None:intergenic |
| CGAGGTAACCGGTTGCCATA+AGG | 0.470762 | 3.4:+80881395 | MS.gene84700:CDS |
| GTATACTGGTTTGTTTGGTA+CGG | 0.478591 | 3.4:+80881350 | MS.gene84700:CDS |
| AAATGGATTGGTAAAGAAAG+TGG | 0.483936 | 3.4:+80884860 | MS.gene84700:CDS |
| CGAGATGCAGCAATAGAAGC+AGG | 0.491904 | 3.4:+80884822 | MS.gene84700:CDS |
| ATCATGGGTGCAGGTGGTGG+AGG | 0.495614 | 3.4:+80881290 | MS.gene84700:intron |
| TCAGCATATTCACTTGGAAG+TGG | 0.502868 | 3.4:-80884366 | None:intergenic |
| GAAAATATGAATCCTACGGT+TGG | 0.504018 | 3.4:+80881032 | MS.gene84700:CDS |
| AACCGGTTGCCATAAGGACT+TGG | 0.505608 | 3.4:+80881401 | MS.gene84700:CDS |
| TGAGGCTATACATGAGCCTT+CGG | 0.505874 | 3.4:+80880998 | MS.gene84700:CDS |
| AACGAGAGAGCCCTGCCTGT+TGG | 0.511760 | 3.4:+80884075 | MS.gene84700:CDS |
| CTGTTGCACGTGACTCCCTC+AGG | 0.513799 | 3.4:+80881457 | MS.gene84700:CDS |
| CTGCCTGTTGGACCCGAGGA+AGG | 0.519990 | 3.4:+80884087 | MS.gene84700:CDS |
| TGTATCGATGGCACGGGACG+AGG | 0.520089 | 3.4:+80884289 | MS.gene84700:CDS |
| TACATTGTCTAAAGCAGCAC+AGG | 0.520883 | 3.4:+80884518 | MS.gene84700:CDS |
| ATCCCAAAACCACCTTCCTC+GGG | 0.522029 | 3.4:-80884099 | None:intergenic |
| ATTATTGATGCAGTATTGGC+CGG | 0.523385 | 3.4:+80884225 | MS.gene84700:CDS |
| AATGGCTACTCTCTCTTCCA+TGG | 0.523997 | 3.4:+80885041 | MS.gene84700:CDS |
| GATCTTCTATACGGACGAGC+TGG | 0.524233 | 3.4:+80884129 | MS.gene84700:CDS |
| TGGTGGAGGTGAATTGGAAT+CGG | 0.525278 | 3.4:+80881304 | MS.gene84700:CDS |
| AATGACATCTTCAGTGATTG+AGG | 0.526255 | 3.4:+80880965 | None:intergenic |
| CCTATACGCGCTTGGAGCTG+TGG | 0.528012 | 3.4:+80883449 | MS.gene84700:CDS |
| CAAGTTGTTGCGGATGGCAA+TGG | 0.529476 | 3.4:+80885023 | MS.gene84700:CDS |
| AGTAAAAGATTCCCTCATAG+TGG | 0.532411 | 3.4:+80884420 | MS.gene84700:CDS |
| AGCCCTGCCTGTTGGACCCG+AGG | 0.533647 | 3.4:+80884083 | MS.gene84700:CDS |
| TGATTGCACCTGATAACTCT+AGG | 0.537731 | 3.4:+80885096 | MS.gene84700:CDS |
| GTATGATAAAGCTAGAGCTC+TGG | 0.539411 | 3.4:+80884989 | MS.gene84700:CDS |
| ATGGGTAATTTCCACTATGA+GGG | 0.540868 | 3.4:-80884431 | None:intergenic |
| GGAAATTACCCATCAAGTGA+AGG | 0.544436 | 3.4:+80884441 | MS.gene84700:CDS |
| TGAATATGCTGAAGATGTCA+AGG | 0.544547 | 3.4:+80884377 | MS.gene84700:CDS |
| ATGCTGTCCCAGCAAGTCCA+TGG | 0.546269 | 3.4:-80885058 | None:intergenic |
| TGGCACGGGACGAGGTACTT+AGG | 0.547567 | 3.4:+80884297 | MS.gene84700:CDS |
| AATGGATTGGTAAAGAAAGT+GGG | 0.551995 | 3.4:+80884861 | MS.gene84700:CDS |
| ACATCTTCAGCATATTCACT+TGG | 0.554521 | 3.4:-80884372 | None:intergenic |
| ACCATCTATAATTCATAACC+TGG | 0.556145 | 3.4:-80885122 | None:intergenic |
| TGCAATCTCTCTCAAGGATG+AGG | 0.556511 | 3.4:+80881091 | MS.gene84700:CDS |
| AAAAGCTGCAATCTCTCTCA+AGG | 0.556662 | 3.4:+80881085 | MS.gene84700:CDS |
| AGGTACTTAGGTGCAGCAAA+TGG | 0.557807 | 3.4:+80884309 | MS.gene84700:CDS |
| AAGTTAGTGCAGTGGAGTCA+TGG | 0.561990 | 3.4:+80884477 | MS.gene84700:CDS |
| CGCAGAAAATATGAATCCTA+CGG | 0.563968 | 3.4:+80881028 | MS.gene84700:CDS |
| CGGACGAGCTGGATTCCTAT+GGG | 0.567390 | 3.4:+80884140 | MS.gene84700:CDS |
| AAGATATTATATATGAAGAG+AGG | 0.573823 | 3.4:+80884943 | MS.gene84700:CDS |
| TTCCTCGGGTCCAACAGGCA+GGG | 0.575233 | 3.4:-80884085 | None:intergenic |
| GTAGAGTGAAAGAAAAGCAT+AGG | 0.575709 | 3.4:-80884910 | None:intergenic |
| CCTGTTGGACCCGAGGAAGG+TGG | 0.580002 | 3.4:+80884090 | MS.gene84700:CDS |
| AGAGGAGGCCTATACGCGCT+TGG | 0.581069 | 3.4:+80883441 | MS.gene84700:CDS |
| CCGTTGATGTATCGATGGCA+CGG | 0.585807 | 3.4:+80884282 | MS.gene84700:CDS |
| GAAATTACCCATCAAGTGAA+GGG | 0.589356 | 3.4:+80884442 | MS.gene84700:CDS |
| AGATATTATATATGAAGAGA+GGG | 0.592109 | 3.4:+80884944 | MS.gene84700:CDS |
| GAAGAGCAAGTTGTTGCGGA+TGG | 0.592187 | 3.4:+80885017 | MS.gene84700:CDS |
| GAGAGAAGTGATTGATCCAA+CGG | 0.594251 | 3.4:+80881326 | MS.gene84700:CDS |
| CAAGAGATAAGTTAGTGCAG+TGG | 0.595756 | 3.4:+80884469 | MS.gene84700:CDS |
| TGGACACTGTATCTTCACCT+AGG | 0.595895 | 3.4:-80884185 | None:intergenic |
| GAGGGAGTCACGTGCAACAG+TGG | 0.596154 | 3.4:-80881454 | None:intergenic |
| AAGAAAGTGGGACTTGCTGA+TGG | 0.600758 | 3.4:+80884873 | MS.gene84700:CDS |
| TTAGGAACAATGCAGCCCAT+AGG | 0.602891 | 3.4:-80884155 | None:intergenic |
| AACAAACCAGTATACACCGT+TGG | 0.606206 | 3.4:-80881342 | None:intergenic |
| CACTTGCCTGAGATCGTACG+AGG | 0.607938 | 3.4:+80881377 | MS.gene84700:CDS |
| AGATGCAGCAATAGAAGCAG+GGG | 0.610957 | 3.4:+80884824 | MS.gene84700:CDS |
| ATGACATCTTCAGTGATTGA+GGG | 0.616250 | 3.4:+80880966 | MS.gene84700:CDS |
| GAGATGCAGCAATAGAAGCA+GGG | 0.617431 | 3.4:+80884823 | MS.gene84700:CDS |
| CGTTGATGTATCGATGGCAC+GGG | 0.619816 | 3.4:+80884283 | MS.gene84700:CDS |
| CACTTGGAAGTGGAAAATGA+AGG | 0.623493 | 3.4:-80884356 | None:intergenic |
| AGTGAAAGATTTCCAACCGT+AGG | 0.625562 | 3.4:-80881044 | None:intergenic |
| ACTGTCCGTTGATGTATCGA+TGG | 0.628349 | 3.4:+80884277 | MS.gene84700:CDS |
| CTGTGGTTGCTAATTACATG+GGG | 0.632443 | 3.4:+80883466 | MS.gene84700:CDS |
| GCTGTGGTTGCTAATTACAT+GGG | 0.639480 | 3.4:+80883465 | MS.gene84700:CDS |
| GAATATGCTGAAGATGTCAA+GGG | 0.646716 | 3.4:+80884378 | MS.gene84700:CDS |
| ACATCTTCAGTGATTGAGGG+TGG | 0.648605 | 3.4:+80880969 | MS.gene84700:CDS |
| GAGTCATGGTGCAACTGGGA+TGG | 0.649370 | 3.4:+80884491 | MS.gene84700:CDS |
| AGACGCTCCTGCTCTACCGC+CGG | 0.651744 | 3.4:-80884244 | None:intergenic |
| AGTGGAGTCATGGTGCAACT+GGG | 0.652142 | 3.4:+80884487 | MS.gene84700:CDS |
| ACTTGAAGAGCAAGTTGTTG+CGG | 0.655177 | 3.4:+80885013 | MS.gene84700:CDS |
| GATTGAGGGTGGACACGATG+AGG | 0.656832 | 3.4:+80880980 | MS.gene84700:CDS |
| CCGTGCCATCGATACATCAA+CGG | 0.671169 | 3.4:-80884282 | None:intergenic |
| ATTGATGCAGTATTGGCCGG+CGG | 0.677412 | 3.4:+80884228 | MS.gene84700:CDS |
| TTGTTCCTAAACAAGCACCT+AGG | 0.686564 | 3.4:+80884168 | MS.gene84700:CDS |
| GCACATGAAGAATACCAGCA+AGG | 0.692857 | 3.4:-80884332 | None:intergenic |
| TGTGGTTGCTAATTACATGG+GGG | 0.767344 | 3.4:+80883467 | MS.gene84700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATATGATATATTTAT+AGG | - | chr3.4:80884646-80884665 | None:intergenic | 10.0% |
| !! | CAAAATATGATATATTTATA+GGG | - | chr3.4:80884645-80884664 | None:intergenic | 10.0% |
| !!! | AGTTACTTTTTTTTTATTAT+TGG | + | chr3.4:80881819-80881838 | MS.gene84700:intron | 10.0% |
| !!! | ATAAATTTTTTAAAAACAAG+TGG | - | chr3.4:80882714-80882733 | None:intergenic | 10.0% |
| !!! | TTGATTTAATTGAAATTTTT+TGG | + | chr3.4:80883685-80883704 | MS.gene84700:intron | 10.0% |
| !! | ACAAAAAAAAAAAGTCATTA+TGG | + | chr3.4:80883361-80883380 | MS.gene84700:intron | 15.0% |
| !! | TAACTGGAAAAATAAAATAA+AGG | - | chr3.4:80881850-80881869 | None:intergenic | 15.0% |
| !! | TATATACAAATTTATTTGCT+AGG | + | chr3.4:80882161-80882180 | MS.gene84700:intron | 15.0% |
| !! | TTTATAAATATCTTGTTAGT+GGG | + | chr3.4:80883105-80883124 | MS.gene84700:intron | 15.0% |
| !!! | AATCATTTTTTTTTTCTTTC+TGG | + | chr3.4:80882454-80882473 | MS.gene84700:intron | 15.0% |
| !!! | ATCATTTTTTTTTTCTTTCT+GGG | + | chr3.4:80882455-80882474 | MS.gene84700:intron | 15.0% |
| !!! | GGAAATTTTTATGAAAAAAA+TGG | + | chr3.4:80881648-80881667 | MS.gene84700:intron | 15.0% |
| !!! | TTATGAATTATGATTTGTTT+TGG | - | chr3.4:80884558-80884577 | None:intergenic | 15.0% |
| !!! | TTTAATTGAAATTTTTTGGT+TGG | + | chr3.4:80883689-80883708 | MS.gene84700:intron | 15.0% |
| !!! | TTTTATAAATATCTTGTTAG+TGG | + | chr3.4:80883104-80883123 | MS.gene84700:intron | 15.0% |
| !!! | TTTTGTTAGAGATTTAATAA+TGG | - | chr3.4:80883388-80883407 | None:intergenic | 15.0% |
| !! | AAAATAATACGAAACTGATA+TGG | - | chr3.4:80881963-80881982 | None:intergenic | 20.0% |
| !! | ATAAAAATTTCCAGCAAAAA+AGG | - | chr3.4:80881640-80881659 | None:intergenic | 20.0% |
| !! | CTCTTCATATATAATATCTT+TGG | - | chr3.4:80884943-80884962 | None:intergenic | 20.0% |
| !!! | AATGAAAAGAAGTTGTTATT+CGG | - | chr3.4:80881915-80881934 | None:intergenic | 20.0% |
| !!! | ACAAACTAATTTTAGTAAGT+AGG | - | chr3.4:80883763-80883782 | None:intergenic | 20.0% |
| !!! | ATGACTTTTTTTTTTTGTGA+AGG | - | chr3.4:80883359-80883378 | None:intergenic | 20.0% |
| !!! | ATGTCATTTTGTTTTTTTAG+AGG | - | chr3.4:80882542-80882561 | None:intergenic | 20.0% |
| !!! | TCATTTTTTTTTTCTTTCTG+GGG | + | chr3.4:80882456-80882475 | MS.gene84700:intron | 20.0% |
| !!! | TTAATTTTTACTTTTTCGTC+CGG | + | chr3.4:80882638-80882657 | MS.gene84700:intron | 20.0% |
| !!! | TTTTTTTTTTGTGAAGGAAA+TGG | - | chr3.4:80883353-80883372 | None:intergenic | 20.0% |
| ! | ATCTATTTGATCTATCATGA+TGG | + | chr3.4:80883736-80883755 | MS.gene84700:intron | 25.0% |
| ! | ATGTCATATGATCTTCTATA+CGG | + | chr3.4:80884120-80884139 | MS.gene84700:CDS | 25.0% |
| ! | ATTTGCAGGAAAAATTTAGA+GGG | - | chr3.4:80884674-80884693 | None:intergenic | 25.0% |
| ! | CTCATTTGAATTAAGAGAAA+AGG | - | chr3.4:80882686-80882705 | None:intergenic | 25.0% |
| ! | TAAAGACGTTAAATAATGAG+CGG | + | chr3.4:80882221-80882240 | MS.gene84700:intron | 25.0% |
| ! | TTAACAAGTAGTGAAATCAT+GGG | + | chr3.4:80881275-80881294 | MS.gene84700:intron | 25.0% |
| !! | AAATGCTTTTAATGATGTGT+AGG | + | chr3.4:80884047-80884066 | MS.gene84700:intron | 25.0% |
| !! | ACATTTACAAATGATGATGA+CGG | - | chr3.4:80884730-80884749 | None:intergenic | 25.0% |
| !! | ATGAAAAAAATGGATTTGCA+AGG | + | chr3.4:80881658-80881677 | MS.gene84700:intron | 25.0% |
| !! | TAATTCATAACTTGTCTTCA+TGG | + | chr3.4:80884568-80884587 | MS.gene84700:intron | 25.0% |
| !! | TCAGTTTCGTATTATTTTCT+TGG | + | chr3.4:80881965-80881984 | MS.gene84700:intron | 25.0% |
| !!! | AAACTTTTAAAGCACAAACA+CGG | - | chr3.4:80881225-80881244 | None:intergenic | 25.0% |
| !!! | CAACAATTTTTCAACAAACA+TGG | - | chr3.4:80881739-80881758 | None:intergenic | 25.0% |
| !!! | CATTTTTTTTTTCTTTCTGG+GGG | + | chr3.4:80882457-80882476 | MS.gene84700:intron | 25.0% |
| !!! | GCTTTTAAGAATGTTTCATT+AGG | - | chr3.4:80881071-80881090 | None:intergenic | 25.0% |
| !!! | TAATTTTTACTTTTTCGTCC+GGG | + | chr3.4:80882639-80882658 | MS.gene84700:intron | 25.0% |
| !!! | TGTTTTCATGACACTTTTTA+CGG | + | chr3.4:80883128-80883147 | MS.gene84700:intron | 25.0% |
| !!! | TTCACTACTTGTTAACATTT+TGG | - | chr3.4:80881270-80881289 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAAACTACACGA+TGG | + | chr3.4:80883012-80883031 | MS.gene84700:intron | 25.0% |
| AAAATTTCCAGCAAAAAAGG+CGG | - | chr3.4:80881637-80881656 | None:intergenic | 30.0% | |
| AACCTGCAAACAAATATATC+CGG | - | chr3.4:80884781-80884800 | None:intergenic | 30.0% | |
| AATAGGCATTAGAATGTCTT+TGG | - | chr3.4:80884208-80884227 | None:intergenic | 30.0% | |
| AATTGTGACCACATGAAAAT+TGG | + | chr3.4:80883823-80883842 | MS.gene84700:intron | 30.0% | |
| AGTTGTATGGAAAAATGGAT+TGG | + | chr3.4:80884848-80884867 | MS.gene84700:CDS | 30.0% | |
| ATCTTGCCTAACATATTAAG+GGG | + | chr3.4:80882415-80882434 | MS.gene84700:intron | 30.0% | |
| CATTTGCAGGAAAAATTTAG+AGG | - | chr3.4:80884675-80884694 | None:intergenic | 30.0% | |
| GATCTTGCCTAACATATTAA+GGG | + | chr3.4:80882414-80882433 | MS.gene84700:intron | 30.0% | |
| GCTTCTCAAATAGATATGTA+AGG | + | chr3.4:80881758-80881777 | MS.gene84700:intron | 30.0% | |
| GTTAACAAGTAGTGAAATCA+TGG | + | chr3.4:80881274-80881293 | MS.gene84700:intron | 30.0% | |
| GTTTCCAGGTTATGAATTAT+AGG | + | chr3.4:80885118-80885137 | MS.gene84700:CDS | 30.0% | |
| TGGATGGTATAATTCTCTTT+GGG | + | chr3.4:80882260-80882279 | MS.gene84700:intron | 30.0% | |
| TGGTAAAAGTTATGAAGTGA+TGG | - | chr3.4:80881705-80881724 | None:intergenic | 30.0% | |
| TGTAGTCACTAGTCATTAAT+AGG | - | chr3.4:80882371-80882390 | None:intergenic | 30.0% | |
| TTATCAACATGTTTAACCCA+CGG | + | chr3.4:80882762-80882781 | MS.gene84700:intron | 30.0% | |
| TTTGAAAGATTACCATTTGC+AGG | - | chr3.4:80884688-80884707 | None:intergenic | 30.0% | |
| ! | ACACATTGTCATTTGCATTT+GGG | - | chr3.4:80882897-80882916 | None:intergenic | 30.0% |
| ! | AGTAATTTGTCTCAAACGTA+TGG | + | chr3.4:80883633-80883652 | MS.gene84700:intron | 30.0% |
| ! | CTCTAAATTTTTCCTGCAAA+TGG | + | chr3.4:80884673-80884692 | MS.gene84700:intron | 30.0% |
| ! | GAAAGTGGGTATTACTATTT+TGG | - | chr3.4:80883552-80883571 | None:intergenic | 30.0% |
| !! | AAATGGATTGGTAAAGAAAG+TGG | + | chr3.4:80884860-80884879 | MS.gene84700:CDS | 30.0% |
| !! | AATGGATTGGTAAAGAAAGT+GGG | + | chr3.4:80884861-80884880 | MS.gene84700:CDS | 30.0% |
| !! | ATTTAGTTGATGATTAGTGG+CGG | - | chr3.4:80882513-80882532 | None:intergenic | 30.0% |
| !! | GTCATTTAGTTGATGATTAG+TGG | - | chr3.4:80882516-80882535 | None:intergenic | 30.0% |
| !! | TTTTTCAACAAACATGGTTG+TGG | - | chr3.4:80881733-80881752 | None:intergenic | 30.0% |
| AAATGACAATGTGTGTTGTG+TGG | + | chr3.4:80882871-80882890 | MS.gene84700:intron | 35.0% | |
| AAATTTCCAGCAAAAAAGGC+GGG | - | chr3.4:80881636-80881655 | None:intergenic | 35.0% | |
| AACATAACACCAAGTCCTTA+TGG | - | chr3.4:80881413-80881432 | None:intergenic | 35.0% | |
| AAGTATATGTGCTATGTGGA+TGG | + | chr3.4:80882244-80882263 | MS.gene84700:intron | 35.0% | |
| ACATCTTCAGCATATTCACT+TGG | - | chr3.4:80884375-80884394 | None:intergenic | 35.0% | |
| AGAAACTGCTATGTAGTAAC+TGG | - | chr3.4:80881866-80881885 | None:intergenic | 35.0% | |
| AGTAAAAGATTCCCTCATAG+TGG | + | chr3.4:80884420-80884439 | MS.gene84700:CDS | 35.0% | |
| AGTTATGAAGTGATGGCATA+AGG | - | chr3.4:80881698-80881717 | None:intergenic | 35.0% | |
| ATGACATCTTCAGTGATTGA+GGG | + | chr3.4:80880966-80880985 | MS.gene84700:CDS | 35.0% | |
| ATGGGTAATTTCCACTATGA+GGG | - | chr3.4:80884434-80884453 | None:intergenic | 35.0% | |
| ATTGGACCACTAATGTCTAA+TGG | + | chr3.4:80883841-80883860 | MS.gene84700:intron | 35.0% | |
| CATCTATGAGTACATTTGTG+TGG | - | chr3.4:80882832-80882851 | None:intergenic | 35.0% | |
| CCACACTCATTAAGTCATTA+TGG | + | chr3.4:80883326-80883345 | MS.gene84700:intron | 35.0% | |
| CCATAATGACTTAATGAGTG+TGG | - | chr3.4:80883329-80883348 | None:intergenic | 35.0% | |
| CGCAGAAAATATGAATCCTA+CGG | + | chr3.4:80881028-80881047 | MS.gene84700:CDS | 35.0% | |
| GAAAATATGAATCCTACGGT+TGG | + | chr3.4:80881032-80881051 | MS.gene84700:CDS | 35.0% | |
| GAAATTACCCATCAAGTGAA+GGG | + | chr3.4:80884442-80884461 | MS.gene84700:CDS | 35.0% | |
| GAATATGCTGAAGATGTCAA+GGG | + | chr3.4:80884378-80884397 | MS.gene84700:CDS | 35.0% | |
| GATATCCCATTAGACATTAG+TGG | - | chr3.4:80883850-80883869 | None:intergenic | 35.0% | |
| GCCAATACTGCATCAATAAT+AGG | - | chr3.4:80884225-80884244 | None:intergenic | 35.0% | |
| GCCTATTATTGATGCAGTAT+TGG | + | chr3.4:80884221-80884240 | MS.gene84700:CDS | 35.0% | |
| GGATCTTGCCTAACATATTA+AGG | + | chr3.4:80882413-80882432 | MS.gene84700:intron | 35.0% | |
| GTACTCATAGATGTGTTGTA+TGG | + | chr3.4:80882839-80882858 | MS.gene84700:intron | 35.0% | |
| GTGGATGGTATAATTCTCTT+TGG | + | chr3.4:80882259-80882278 | MS.gene84700:intron | 35.0% | |
| GTGGTCACAATTCACAAATA+TGG | - | chr3.4:80883815-80883834 | None:intergenic | 35.0% | |
| TAGAGATATGTGTTCAAACC+CGG | - | chr3.4:80882660-80882679 | None:intergenic | 35.0% | |
| TGAATATGCTGAAGATGTCA+AGG | + | chr3.4:80884377-80884396 | MS.gene84700:CDS | 35.0% | |
| TTAACCCACGGAAAATACTT+GGG | + | chr3.4:80882774-80882793 | MS.gene84700:intron | 35.0% | |
| TTCATATAACTAACGCTCAG+CGG | - | chr3.4:80882080-80882099 | None:intergenic | 35.0% | |
| TTGGACCACTAATGTCTAAT+GGG | + | chr3.4:80883842-80883861 | MS.gene84700:intron | 35.0% | |
| TTGTTTGCTTTGTAGCACAA+AGG | + | chr3.4:80881152-80881171 | MS.gene84700:intron | 35.0% | |
| TTTAACCCACGGAAAATACT+TGG | + | chr3.4:80882773-80882792 | MS.gene84700:intron | 35.0% | |
| ! | ACACATTGTCATTTGCATCT+GGG | - | chr3.4:80882865-80882884 | None:intergenic | 35.0% |
| ! | ACGAAAATTGATAACACCTC+CGG | + | chr3.4:80884759-80884778 | MS.gene84700:intron | 35.0% |
| ! | AGTTGTTATTCGGTGACAAA+AGG | - | chr3.4:80881905-80881924 | None:intergenic | 35.0% |
| ! | CACACATTGTCATTTGCATT+TGG | - | chr3.4:80882898-80882917 | None:intergenic | 35.0% |
| ! | GTAGAGTGAAAGAAAAGCAT+AGG | - | chr3.4:80884913-80884932 | None:intergenic | 35.0% |
| ! | TAACTTGTCTTCATGGTTTG+TGG | + | chr3.4:80884575-80884594 | MS.gene84700:intron | 35.0% |
| ! | TGCTTTTAATGATGTGTAGG+TGG | + | chr3.4:80884050-80884069 | MS.gene84700:intron | 35.0% |
| ! | TTAGTGGTCCAATTTTCATG+TGG | - | chr3.4:80883834-80883853 | None:intergenic | 35.0% |
| !! | AGTAAAGTAAAGAGTACCTG+AGG | - | chr3.4:80881476-80881495 | None:intergenic | 35.0% |
| !! | ATTATTGATGCAGTATTGGC+CGG | + | chr3.4:80884225-80884244 | MS.gene84700:CDS | 35.0% |
| !! | GTAAAGTAAAGAGTACCTGA+GGG | - | chr3.4:80881475-80881494 | None:intergenic | 35.0% |
| !! | GTATACTGGTTTGTTTGGTA+CGG | + | chr3.4:80881350-80881369 | MS.gene84700:CDS | 35.0% |
| !! | TAAGGACTTGGTGTTATGTT+CGG | + | chr3.4:80881413-80881432 | MS.gene84700:CDS | 35.0% |
| AAAAGCTGCAATCTCTCTCA+AGG | + | chr3.4:80881085-80881104 | MS.gene84700:CDS | 40.0% | |
| AAATTCCTAACTCCTGTCCA+AGG | + | chr3.4:80882326-80882345 | MS.gene84700:intron | 40.0% | |
| AACAAACCAGTATACACCGT+TGG | - | chr3.4:80881345-80881364 | None:intergenic | 40.0% | |
| AATTCCTAACTCCTGTCCAA+GGG | + | chr3.4:80882327-80882346 | MS.gene84700:intron | 40.0% | |
| ACTGATATGGAGTGACAGAA+AGG | - | chr3.4:80881950-80881969 | None:intergenic | 40.0% | |
| ACTTGAAGAGCAAGTTGTTG+CGG | + | chr3.4:80885013-80885032 | MS.gene84700:CDS | 40.0% | |
| AGCTGTGGTTGCTAATTACA+TGG | + | chr3.4:80883464-80883483 | MS.gene84700:CDS | 40.0% | |
| AGTGAAAGATTTCCAACCGT+AGG | - | chr3.4:80881047-80881066 | None:intergenic | 40.0% | |
| ATGATGAATGTTGACACAGC+AGG | - | chr3.4:80883943-80883962 | None:intergenic | 40.0% | |
| ATGCTCGTGCTTCATTATTC+AGG | + | chr3.4:80883573-80883592 | MS.gene84700:intron | 40.0% | |
| ATTCCGATAGCGTAACTTTC+AGG | + | chr3.4:80882293-80882312 | MS.gene84700:intron | 40.0% | |
| ATTGATCCAACGGTGTATAC+TGG | + | chr3.4:80881336-80881355 | MS.gene84700:CDS | 40.0% | |
| CAAGAGATAAGTTAGTGCAG+TGG | + | chr3.4:80884469-80884488 | MS.gene84700:CDS | 40.0% | |
| CACTGCACTAACTTATCTCT+TGG | - | chr3.4:80884471-80884490 | None:intergenic | 40.0% | |
| CACTTGGAAGTGGAAAATGA+AGG | - | chr3.4:80884359-80884378 | None:intergenic | 40.0% | |
| CCATGAATAGACCCAAAAAC+AGG | - | chr3.4:80883509-80883528 | None:intergenic | 40.0% | |
| CTCCGGATATATTTGTTTGC+AGG | + | chr3.4:80884776-80884795 | MS.gene84700:intron | 40.0% | |
| CTGCAAACAAATATATCCGG+AGG | - | chr3.4:80884778-80884797 | None:intergenic | 40.0% | |
| CTGTGGTTGCTAATTACATG+GGG | + | chr3.4:80883466-80883485 | MS.gene84700:CDS | 40.0% | |
| GAGAGAAGTGATTGATCCAA+CGG | + | chr3.4:80881326-80881345 | MS.gene84700:CDS | 40.0% | |
| GATGGGTAATTTCCACTATG+AGG | - | chr3.4:80884435-80884454 | None:intergenic | 40.0% | |
| GCTGTGGTTGCTAATTACAT+GGG | + | chr3.4:80883465-80883484 | MS.gene84700:CDS | 40.0% | |
| GGAAATTACCCATCAAGTGA+AGG | + | chr3.4:80884441-80884460 | MS.gene84700:CDS | 40.0% | |
| GGGGAAGTTGTATGGAAAAA+TGG | + | chr3.4:80884843-80884862 | MS.gene84700:CDS | 40.0% | |
| GGTTAATTAGGGCAACTTTC+AGG | - | chr3.4:80881608-80881627 | None:intergenic | 40.0% | |
| GTATGATAAAGCTAGAGCTC+TGG | + | chr3.4:80884989-80885008 | MS.gene84700:CDS | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr3.4:80882806-80882825 | MS.gene84700:intron | 40.0% | |
| TAACTGCTAAAGAACCGTCA+AGG | - | chr3.4:80881804-80881823 | None:intergenic | 40.0% | |
| TAGTGACTACACTCTACCTT+AGG | + | chr3.4:80882380-80882399 | MS.gene84700:intron | 40.0% | |
| TCAGCATATTCACTTGGAAG+TGG | - | chr3.4:80884369-80884388 | None:intergenic | 40.0% | |
| TGAGTGTCTTCGAAGATCTT+TGG | - | chr3.4:80883253-80883272 | None:intergenic | 40.0% | |
| TGATTGCACCTGATAACTCT+AGG | + | chr3.4:80885096-80885115 | MS.gene84700:CDS | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr3.4:80882805-80882824 | MS.gene84700:intron | 40.0% | |
| TGTGGTTGCTAATTACATGG+GGG | + | chr3.4:80883467-80883486 | MS.gene84700:CDS | 40.0% | |
| TTAAGCCACTAACACCTTGA+CGG | + | chr3.4:80881787-80881806 | MS.gene84700:intron | 40.0% | |
| TTGCCTGAAAGTTACGCTAT+CGG | - | chr3.4:80882299-80882318 | None:intergenic | 40.0% | |
| TTGGATTCCCTTCACTTGAT+GGG | - | chr3.4:80884452-80884471 | None:intergenic | 40.0% | |
| TTGTTCCTAAACAAGCACCT+AGG | + | chr3.4:80884168-80884187 | MS.gene84700:CDS | 40.0% | |
| ! | CACACATTGTCATTTGCATC+TGG | - | chr3.4:80882866-80882885 | None:intergenic | 40.0% |
| ! | GCAGGTTTTTCCAAATGACA+GGG | + | chr3.4:80884794-80884813 | MS.gene84700:intron | 40.0% |
| ! | TACATTGTCTAAAGCAGCAC+AGG | + | chr3.4:80884518-80884537 | MS.gene84700:CDS | 40.0% |
| ! | TGCAGGTTTTTCCAAATGAC+AGG | + | chr3.4:80884793-80884812 | MS.gene84700:intron | 40.0% |
| ! | TTTTCTGCGATCAAATCCGA+AGG | - | chr3.4:80881017-80881036 | None:intergenic | 40.0% |
| !! | ACGGTGTATACTGGTTTGTT+TGG | + | chr3.4:80881345-80881364 | MS.gene84700:CDS | 40.0% |
| !! | CAAAAGCGTGACCTGTTTTT+GGG | + | chr3.4:80883495-80883514 | MS.gene84700:CDS | 40.0% |
| !!! | CCTGTTTTTGGGTCTATTCA+TGG | + | chr3.4:80883506-80883525 | MS.gene84700:CDS | 40.0% |
| !!! | GTTTTTGGGTCTATTCATGG+AGG | + | chr3.4:80883509-80883528 | MS.gene84700:CDS | 40.0% |
| AAGTTAGTGCAGTGGAGTCA+TGG | + | chr3.4:80884477-80884496 | MS.gene84700:CDS | 45.0% | |
| AATGGCTACTCTCTCTTCCA+TGG | + | chr3.4:80885041-80885060 | MS.gene84700:CDS | 45.0% | |
| AATGTTGACACAGCAGGATG+TGG | - | chr3.4:80883937-80883956 | None:intergenic | 45.0% | |
| ACATCTTCAGTGATTGAGGG+TGG | + | chr3.4:80880969-80880988 | MS.gene84700:CDS | 45.0% | |
| ACTGTCCGTTGATGTATCGA+TGG | + | chr3.4:80884277-80884296 | MS.gene84700:CDS | 45.0% | |
| AGATCCACCATTGAGTCCTA+AGG | - | chr3.4:80882399-80882418 | None:intergenic | 45.0% | |
| AGATGCAGCAATAGAAGCAG+GGG | + | chr3.4:80884824-80884843 | MS.gene84700:CDS | 45.0% | |
| AGGCGGGATTAGGGTTAATT+AGG | - | chr3.4:80881620-80881639 | None:intergenic | 45.0% | |
| AGGTACTTAGGTGCAGCAAA+TGG | + | chr3.4:80884309-80884328 | MS.gene84700:CDS | 45.0% | |
| AGTAGTGAAATCATGGGTGC+AGG | + | chr3.4:80881281-80881300 | MS.gene84700:intron | 45.0% | |
| ATGTTGACACAGCAGGATGT+GGG | - | chr3.4:80883936-80883955 | None:intergenic | 45.0% | |
| CAAACATGGTTGTGGCTAAG+TGG | - | chr3.4:80881725-80881744 | None:intergenic | 45.0% | |
| CACTCTACCTTAGGACTCAA+TGG | + | chr3.4:80882389-80882408 | MS.gene84700:intron | 45.0% | |
| CAGCAAAAAAGGCGGGATTA+GGG | - | chr3.4:80881629-80881648 | None:intergenic | 45.0% | |
| CCTATCAATACTGTGTCCCT+TGG | - | chr3.4:80882346-80882365 | None:intergenic | 45.0% | |
| CCTGATAACTCTAGGTTTCC+AGG | + | chr3.4:80885104-80885123 | MS.gene84700:CDS | 45.0% | |
| CCTGGAAACCTAGAGTTATC+AGG | - | chr3.4:80885107-80885126 | None:intergenic | 45.0% | |
| CTTCACCTAGGTGCTTGTTT+AGG | - | chr3.4:80884176-80884195 | None:intergenic | 45.0% | |
| CTTGGATTCCCTTCACTTGA+TGG | - | chr3.4:80884453-80884472 | None:intergenic | 45.0% | |
| GAAGCACGAGCATAGAAAGT+GGG | - | chr3.4:80883566-80883585 | None:intergenic | 45.0% | |
| GAGATGCAGCAATAGAAGCA+GGG | + | chr3.4:80884823-80884842 | MS.gene84700:CDS | 45.0% | |
| GATAAAGATGCGTACACGCA+AGG | - | chr3.4:80881560-80881579 | None:intergenic | 45.0% | |
| GATTTGCAAGGAATCGAACC+AGG | + | chr3.4:80881670-80881689 | MS.gene84700:intron | 45.0% | |
| GCACATGAAGAATACCAGCA+AGG | - | chr3.4:80884335-80884354 | None:intergenic | 45.0% | |
| GGCGGGATTAGGGTTAATTA+GGG | - | chr3.4:80881619-80881638 | None:intergenic | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr3.4:80882813-80882832 | None:intergenic | 45.0% | |
| TAGAAGCAGGGGAAGTTGTA+TGG | + | chr3.4:80884835-80884854 | MS.gene84700:CDS | 45.0% | |
| TCAGCGGAAGTAATCAAAGG+TGG | - | chr3.4:80882064-80882083 | None:intergenic | 45.0% | |
| TCTACCTTAGGACTCAATGG+TGG | + | chr3.4:80882392-80882411 | MS.gene84700:intron | 45.0% | |
| TCTCGTAGTTCCCTGTCATT+TGG | - | chr3.4:80884807-80884826 | None:intergenic | 45.0% | |
| TGAAGCACGAGCATAGAAAG+TGG | - | chr3.4:80883567-80883586 | None:intergenic | 45.0% | |
| TGAGGCTATACATGAGCCTT+CGG | + | chr3.4:80880998-80881017 | MS.gene84700:CDS | 45.0% | |
| TGCAATCTCTCTCAAGGATG+AGG | + | chr3.4:80881091-80881110 | MS.gene84700:CDS | 45.0% | |
| TGGACACTGTATCTTCACCT+AGG | - | chr3.4:80884188-80884207 | None:intergenic | 45.0% | |
| TGGTGGAGGTGAATTGGAAT+CGG | + | chr3.4:80881304-80881323 | MS.gene84700:CDS | 45.0% | |
| TTAGGAACAATGCAGCCCAT+AGG | - | chr3.4:80884158-80884177 | None:intergenic | 45.0% | |
| TTCGCGCCCCTTAATATGTT+AGG | - | chr3.4:80882424-80882443 | None:intergenic | 45.0% | |
| ! | AAAACAGGTCACGCTTTTGG+AGG | - | chr3.4:80883494-80883513 | None:intergenic | 45.0% |
| ! | AAGAACCGTCAAGGTGTTAG+TGG | - | chr3.4:80881795-80881814 | None:intergenic | 45.0% |
| ! | AAGTGATGGCATAAGGTACC+TGG | - | chr3.4:80881691-80881710 | None:intergenic | 45.0% |
| ! | ACTTTTCTGTGTGGTAGAGG+AGG | + | chr3.4:80883426-80883445 | MS.gene84700:CDS | 45.0% |
| ! | AGACACGTGACTTTTCTGTG+TGG | + | chr3.4:80883417-80883436 | MS.gene84700:intron | 45.0% |
| ! | CCAAAAACAGGTCACGCTTT+TGG | - | chr3.4:80883497-80883516 | None:intergenic | 45.0% |
| ! | GATTAGTGGCGGAACTCTTA+AGG | - | chr3.4:80882502-80882521 | None:intergenic | 45.0% |
| ! | GCGGAAGTATATGTGCTATG+TGG | + | chr3.4:80882240-80882259 | MS.gene84700:intron | 45.0% |
| ! | GTCACCCAAGTATTTTCCGT+GGG | - | chr3.4:80882781-80882800 | None:intergenic | 45.0% |
| ! | GTGACTTTTCTGTGTGGTAG+AGG | + | chr3.4:80883423-80883442 | MS.gene84700:CDS | 45.0% |
| ! | TGTCACCCAAGTATTTTCCG+TGG | - | chr3.4:80882782-80882801 | None:intergenic | 45.0% |
| !! | AAGAAAGTGGGACTTGCTGA+TGG | + | chr3.4:80884873-80884892 | MS.gene84700:CDS | 45.0% |
| !! | CCAAAAGCGTGACCTGTTTT+TGG | + | chr3.4:80883494-80883513 | MS.gene84700:CDS | 45.0% |
| !! | CCAAGGGACACAGTATTGAT+AGG | + | chr3.4:80882343-80882362 | MS.gene84700:intron | 45.0% |
| AACCGGTTGCCATAAGGACT+TGG | + | chr3.4:80881401-80881420 | MS.gene84700:CDS | 50.0% | |
| AGTCAATTTACACGCCCGTG+TGG | - | chr3.4:80882949-80882968 | None:intergenic | 50.0% | |
| AGTGAAATCATGGGTGCAGG+TGG | + | chr3.4:80881284-80881303 | MS.gene84700:intron | 50.0% | |
| AGTGGAGTCATGGTGCAACT+GGG | + | chr3.4:80884487-80884506 | MS.gene84700:CDS | 50.0% | |
| ATCCCAAAACCACCTTCCTC+GGG | - | chr3.4:80884102-80884121 | None:intergenic | 50.0% | |
| CAAGTTGTTGCGGATGGCAA+TGG | + | chr3.4:80885023-80885042 | MS.gene84700:CDS | 50.0% | |
| CAATACTGTGTCCCTTGGAC+AGG | - | chr3.4:80882341-80882360 | None:intergenic | 50.0% | |
| CACCAAGTCCTTATGGCAAC+CGG | - | chr3.4:80881406-80881425 | None:intergenic | 50.0% | |
| CATCCCAAAACCACCTTCCT+CGG | - | chr3.4:80884103-80884122 | None:intergenic | 50.0% | |
| CCAGCAAAAAAGGCGGGATT+AGG | - | chr3.4:80881630-80881649 | None:intergenic | 50.0% | |
| CCGTGCCATCGATACATCAA+CGG | - | chr3.4:80884285-80884304 | None:intergenic | 50.0% | |
| CGAGATGCAGCAATAGAAGC+AGG | + | chr3.4:80884822-80884841 | MS.gene84700:CDS | 50.0% | |
| CGCTCAGCGGAAGTAATCAA+AGG | - | chr3.4:80882067-80882086 | None:intergenic | 50.0% | |
| CTGAGATCGTACGAGGTAAC+CGG | + | chr3.4:80881384-80881403 | MS.gene84700:CDS | 50.0% | |
| GAAGAGCAAGTTGTTGCGGA+TGG | + | chr3.4:80885017-80885036 | MS.gene84700:CDS | 50.0% | |
| GATCTTCTATACGGACGAGC+TGG | + | chr3.4:80884129-80884148 | MS.gene84700:CDS | 50.0% | |
| GTCAATTTACACGCCCGTGT+GGG | - | chr3.4:80882948-80882967 | None:intergenic | 50.0% | |
| GTGCTGTCCATTAACCCACA+CGG | + | chr3.4:80882931-80882950 | MS.gene84700:intron | 50.0% | |
| TACAAAACCCGTGCGATGCA+CGG | + | chr3.4:80882104-80882123 | MS.gene84700:intron | 50.0% | |
| TCTCTCTTCCATGGACTTGC+TGG | + | chr3.4:80885050-80885069 | MS.gene84700:CDS | 50.0% | |
| TGCTGTCCATTAACCCACAC+GGG | + | chr3.4:80882932-80882951 | MS.gene84700:intron | 50.0% | |
| TGTTGACACAGCAGGATGTG+GGG | - | chr3.4:80883935-80883954 | None:intergenic | 50.0% | |
| TTGCTGGGACAGCATGTCTT+TGG | + | chr3.4:80885066-80885085 | MS.gene84700:CDS | 50.0% | |
| ! | CCGTTGATGTATCGATGGCA+CGG | + | chr3.4:80884282-80884301 | MS.gene84700:CDS | 50.0% |
| ! | CGTTGATGTATCGATGGCAC+GGG | + | chr3.4:80884283-80884302 | MS.gene84700:CDS | 50.0% |
| ! | CTCTCTTCCATGGACTTGCT+GGG | + | chr3.4:80885051-80885070 | MS.gene84700:CDS | 50.0% |
| ! | GTGGGTTAATGGACAGCACT+GGG | - | chr3.4:80882930-80882949 | None:intergenic | 50.0% |
| ! | TGGGTTAATGGACAGCACTG+GGG | - | chr3.4:80882929-80882948 | None:intergenic | 50.0% |
| ! | TGTGGGTTAATGGACAGCAC+TGG | - | chr3.4:80882931-80882950 | None:intergenic | 50.0% |
| !! | ATTGATGCAGTATTGGCCGG+CGG | + | chr3.4:80884228-80884247 | MS.gene84700:CDS | 50.0% |
| !!! | CCTAATCCCGCCTTTTTTGC+TGG | + | chr3.4:80881627-80881646 | MS.gene84700:intron | 50.0% |
| ACAAAACCCGTGCGATGCAC+GGG | + | chr3.4:80882105-80882124 | MS.gene84700:intron | 55.0% | |
| ACGGACGAGCTGGATTCCTA+TGG | + | chr3.4:80884139-80884158 | MS.gene84700:CDS | 55.0% | |
| ACTCTTACCCGTGCATCGCA+CGG | - | chr3.4:80882115-80882134 | None:intergenic | 55.0% | |
| ATGCTGTCCCAGCAAGTCCA+TGG | - | chr3.4:80885061-80885080 | None:intergenic | 55.0% | |
| CACTTGCCTGAGATCGTACG+AGG | + | chr3.4:80881377-80881396 | MS.gene84700:CDS | 55.0% | |
| CAGTGGAGTCATGGTGCAAC+TGG | + | chr3.4:80884486-80884505 | MS.gene84700:CDS | 55.0% | |
| CGAGGTAACCGGTTGCCATA+AGG | + | chr3.4:80881395-80881414 | MS.gene84700:CDS | 55.0% | |
| CGGACGAGCTGGATTCCTAT+GGG | + | chr3.4:80884140-80884159 | MS.gene84700:CDS | 55.0% | |
| CGGTTACCTCGTACGATCTC+AGG | - | chr3.4:80881386-80881405 | None:intergenic | 55.0% | |
| GAAATCATGGGTGCAGGTGG+TGG | + | chr3.4:80881287-80881306 | MS.gene84700:intron | 55.0% | |
| GAGTCATGGTGCAACTGGGA+TGG | + | chr3.4:80884491-80884510 | MS.gene84700:CDS | 55.0% | |
| GATTGAGGGTGGACACGATG+AGG | + | chr3.4:80880980-80880999 | MS.gene84700:CDS | 55.0% | |
| GTGTCCCTTGGACAGGAGTT+AGG | - | chr3.4:80882334-80882353 | None:intergenic | 55.0% | |
| ! | GACCCGAGGAAGGTGGTTTT+GGG | + | chr3.4:80884097-80884116 | MS.gene84700:CDS | 55.0% |
| ! | TACACGCCCGTGTGGGTTAA+TGG | - | chr3.4:80882941-80882960 | None:intergenic | 55.0% |
| ! | TGGGGGACTAGTGCTCACTT+AGG | + | chr3.4:80882474-80882493 | MS.gene84700:intron | 55.0% |
| !! | GGACTTGCTGATGGCGTATC+TGG | + | chr3.4:80884882-80884901 | MS.gene84700:CDS | 55.0% |
| !! | TGCAGGTGGTGGAGGTGAAT+TGG | + | chr3.4:80881298-80881317 | MS.gene84700:intron | 55.0% |
| AACGAGAGAGCCCTGCCTGT+TGG | + | chr3.4:80884075-80884094 | MS.gene84700:CDS | 60.0% | |
| AGAGGAGGCCTATACGCGCT+TGG | + | chr3.4:80883441-80883460 | MS.gene84700:CDS | 60.0% | |
| CCACAGCTCCAAGCGCGTAT+AGG | - | chr3.4:80883452-80883471 | None:intergenic | 60.0% | |
| CCTATACGCGCTTGGAGCTG+TGG | + | chr3.4:80883449-80883468 | MS.gene84700:CDS | 60.0% | |
| CTCTTACCCGTGCATCGCAC+GGG | - | chr3.4:80882114-80882133 | None:intergenic | 60.0% | |
| CTGTTGCACGTGACTCCCTC+AGG | + | chr3.4:80881457-80881476 | MS.gene84700:CDS | 60.0% | |
| GAGGGAGTCACGTGCAACAG+TGG | - | chr3.4:80881457-80881476 | None:intergenic | 60.0% | |
| TTCCTCGGGTCCAACAGGCA+GGG | - | chr3.4:80884088-80884107 | None:intergenic | 60.0% | |
| ! | ATCATGGGTGCAGGTGGTGG+AGG | + | chr3.4:80881290-80881309 | MS.gene84700:intron | 60.0% |
| ! | GGACCCGAGGAAGGTGGTTT+TGG | + | chr3.4:80884096-80884115 | MS.gene84700:CDS | 60.0% |
| ! | GGTGCAGCAAATGGCCTTGC+TGG | + | chr3.4:80884318-80884337 | MS.gene84700:CDS | 60.0% |
| ! | TGGCACGGGACGAGGTACTT+AGG | + | chr3.4:80884297-80884316 | MS.gene84700:CDS | 60.0% |
| ! | TGTATCGATGGCACGGGACG+AGG | + | chr3.4:80884289-80884308 | MS.gene84700:CDS | 60.0% |
| AGACGCTCCTGCTCTACCGC+CGG | - | chr3.4:80884247-80884266 | None:intergenic | 65.0% | |
| CCACCTTCCTCGGGTCCAAC+AGG | - | chr3.4:80884093-80884112 | None:intergenic | 65.0% | |
| CCTGTTGGACCCGAGGAAGG+TGG | + | chr3.4:80884090-80884109 | MS.gene84700:CDS | 65.0% | |
| CTGCCTGTTGGACCCGAGGA+AGG | + | chr3.4:80884087-80884106 | MS.gene84700:CDS | 65.0% | |
| CTTCCTCGGGTCCAACAGGC+AGG | - | chr3.4:80884089-80884108 | None:intergenic | 65.0% | |
| GCAGGATGTGGGGCAGTGTG+TGG | - | chr3.4:80883925-80883944 | None:intergenic | 65.0% | |
| ! | GTATTGGCCGGCGGTAGAGC+AGG | + | chr3.4:80884237-80884256 | MS.gene84700:CDS | 65.0% |
| AGCCCTGCCTGTTGGACCCG+AGG | + | chr3.4:80884083-80884102 | MS.gene84700:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80880966 | 80885139 | 80880966 | ID=MS.gene84700 |
| chr3.4 | mRNA | 80880966 | 80885139 | 80880966 | ID=MS.gene84700.t1;Parent=MS.gene84700 |
| chr3.4 | exon | 80880966 | 80881112 | 80880966 | ID=MS.gene84700.t1.exon1;Parent=MS.gene84700.t1 |
| chr3.4 | CDS | 80880966 | 80881112 | 80880966 | ID=cds.MS.gene84700.t1;Parent=MS.gene84700.t1 |
| chr3.4 | exon | 80881303 | 80881478 | 80881303 | ID=MS.gene84700.t1.exon2;Parent=MS.gene84700.t1 |
| chr3.4 | CDS | 80881303 | 80881478 | 80881303 | ID=cds.MS.gene84700.t1;Parent=MS.gene84700.t1 |
| chr3.4 | exon | 80883419 | 80883530 | 80883419 | ID=MS.gene84700.t1.exon3;Parent=MS.gene84700.t1 |
| chr3.4 | CDS | 80883419 | 80883530 | 80883419 | ID=cds.MS.gene84700.t1;Parent=MS.gene84700.t1 |
| chr3.4 | exon | 80884069 | 80884539 | 80884069 | ID=MS.gene84700.t1.exon4;Parent=MS.gene84700.t1 |
| chr3.4 | CDS | 80884069 | 80884539 | 80884069 | ID=cds.MS.gene84700.t1;Parent=MS.gene84700.t1 |
| chr3.4 | exon | 80884798 | 80885139 | 80884798 | ID=MS.gene84700.t1.exon5;Parent=MS.gene84700.t1 |
| chr3.4 | CDS | 80884798 | 80885139 | 80884798 | ID=cds.MS.gene84700.t1;Parent=MS.gene84700.t1 |
| Gene Sequence |
| Protein sequence |
