Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073527.t1 | AES87101.2 | 96.2 | 479 | 18 | 0 | 1 | 479 | 1 | 479 | 2.30E-256 | 894.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073527.t1 | G7JTD5 | 96.2 | 479 | 18 | 0 | 1 | 479 | 1 | 479 | 1.6e-256 | 894.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene073527 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene073527 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene073527 | 0.803722 | 3.04E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene073527 | 0.825563 | 4.38E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene073527 | 0.853314 | 2.59E-61 | -1.69E-46 |
| MS.gene056856 | MS.gene073527 | 0.801729 | 7.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073527.t1 | MTR_4g021260 | 96.242 | 479 | 18 | 0 | 1 | 479 | 1 | 479 | 0.0 | 962 |
| MS.gene073527.t1 | MTR_7g063040 | 47.579 | 475 | 223 | 8 | 17 | 478 | 23 | 484 | 1.08e-138 | 408 |
| MS.gene073527.t1 | MTR_0318s0020 | 28.870 | 478 | 273 | 9 | 19 | 479 | 128 | 555 | 1.45e-54 | 192 |
| MS.gene073527.t1 | MTR_6g461910 | 29.352 | 494 | 302 | 11 | 10 | 479 | 27 | 497 | 1.13e-53 | 188 |
| MS.gene073527.t1 | MTR_1g044135 | 40.654 | 214 | 117 | 1 | 17 | 230 | 41 | 244 | 1.60e-46 | 171 |
| MS.gene073527.t1 | MTR_1g044135 | 44.521 | 146 | 76 | 3 | 330 | 475 | 435 | 575 | 2.57e-31 | 127 |
| MS.gene073527.t1 | MTR_1g073890 | 43.925 | 214 | 111 | 2 | 17 | 230 | 44 | 248 | 1.71e-46 | 170 |
| MS.gene073527.t1 | MTR_1g073890 | 40.411 | 146 | 82 | 2 | 330 | 475 | 405 | 545 | 3.79e-28 | 118 |
| MS.gene073527.t1 | MTR_7g103490 | 26.454 | 533 | 318 | 9 | 9 | 479 | 19 | 539 | 1.05e-45 | 167 |
| MS.gene073527.t1 | MTR_3g091180 | 41.549 | 142 | 83 | 0 | 331 | 472 | 422 | 563 | 1.11e-29 | 122 |
| MS.gene073527.t1 | MTR_3g091180 | 27.891 | 294 | 179 | 6 | 8 | 287 | 15 | 289 | 4.23e-24 | 105 |
| MS.gene073527.t1 | MTR_1g092540 | 30.045 | 223 | 148 | 1 | 8 | 230 | 15 | 229 | 3.24e-29 | 121 |
| MS.gene073527.t1 | MTR_1g092540 | 32.114 | 246 | 137 | 8 | 242 | 473 | 341 | 570 | 4.62e-29 | 120 |
| MS.gene073527.t1 | MTR_1g061540 | 37.838 | 148 | 80 | 4 | 328 | 472 | 379 | 517 | 3.67e-22 | 99.8 |
| MS.gene073527.t1 | MTR_1g061540 | 27.897 | 233 | 158 | 2 | 15 | 244 | 25 | 250 | 2.67e-19 | 90.9 |
| MS.gene073527.t1 | MTR_1g096970 | 25.431 | 232 | 167 | 2 | 19 | 250 | 51 | 276 | 1.06e-14 | 76.6 |
| MS.gene073527.t1 | MTR_1g096970 | 28.571 | 147 | 88 | 3 | 333 | 469 | 269 | 408 | 2.74e-11 | 66.2 |
| MS.gene073527.t1 | MTR_3g114010 | 24.766 | 214 | 155 | 2 | 19 | 232 | 122 | 329 | 3.15e-12 | 69.3 |
| MS.gene073527.t1 | MTR_1g025340 | 24.775 | 222 | 153 | 3 | 13 | 230 | 121 | 332 | 1.56e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073527.t1 | AT3G23160 | 41.256 | 223 | 121 | 2 | 9 | 231 | 34 | 246 | 4.34e-48 | 174 |
| MS.gene073527.t1 | AT3G23160 | 39.744 | 156 | 88 | 4 | 321 | 475 | 347 | 497 | 6.70e-29 | 120 |
| MS.gene073527.t1 | AT5G51670 | 36.413 | 184 | 107 | 3 | 300 | 479 | 281 | 458 | 2.37e-29 | 120 |
| MS.gene073527.t1 | AT5G51670 | 28.511 | 235 | 157 | 3 | 7 | 231 | 20 | 253 | 5.20e-20 | 92.8 |
| MS.gene073527.t1 | AT5G51670 | 36.413 | 184 | 107 | 3 | 300 | 479 | 281 | 458 | 2.37e-29 | 120 |
| MS.gene073527.t1 | AT5G51670 | 28.511 | 235 | 157 | 3 | 7 | 231 | 20 | 253 | 5.20e-20 | 92.8 |
| MS.gene073527.t1 | AT5G04550 | 28.814 | 236 | 159 | 1 | 19 | 254 | 26 | 252 | 7.08e-27 | 114 |
| MS.gene073527.t1 | AT5G04550 | 36.774 | 155 | 97 | 1 | 325 | 479 | 424 | 577 | 1.30e-24 | 107 |
| MS.gene073527.t1 | AT5G04550 | 28.814 | 236 | 159 | 1 | 19 | 254 | 26 | 252 | 7.08e-27 | 114 |
| MS.gene073527.t1 | AT5G04550 | 36.774 | 155 | 97 | 1 | 325 | 479 | 424 | 577 | 1.30e-24 | 107 |
| MS.gene073527.t1 | AT1G34320 | 25.229 | 218 | 159 | 2 | 19 | 236 | 155 | 368 | 1.76e-13 | 73.2 |
| MS.gene073527.t1 | AT1G34320 | 25.229 | 218 | 159 | 2 | 19 | 236 | 155 | 368 | 1.76e-13 | 73.2 |
Find 160 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAACAACAACAACGTTAT+TGG | 0.208028 | 4.1:-76920739 | MS.gene073527:CDS |
| GCGAGGATGCCGAGGGTTTC+GGG | 0.218886 | 4.1:+76921175 | None:intergenic |
| AGCCAAGATCACAACATTTC+TGG | 0.242412 | 4.1:+76920945 | None:intergenic |
| CGGACTTCACCACGCGCTTT+TGG | 0.243094 | 4.1:+76920390 | None:intergenic |
| GACATTGCATTACTCTGATT+TGG | 0.257344 | 4.1:-76919877 | MS.gene073527:CDS |
| CACAACATTTCTGGCCTATA+CGG | 0.259057 | 4.1:+76920954 | None:intergenic |
| GGCGAGGATGCCGAGGGTTT+CGG | 0.276811 | 4.1:+76921174 | None:intergenic |
| ATTTCAAGGAAACATCATTA+TGG | 0.291243 | 4.1:-76920634 | MS.gene073527:CDS |
| GTTTGACCATTGTTGCCTTC+TGG | 0.297365 | 4.1:-76920474 | MS.gene073527:CDS |
| TTGAGAAACCTTATCACATT+AGG | 0.320704 | 4.1:+76920341 | None:intergenic |
| TTGGGTTGAGTTGTGTATAT+TGG | 0.321774 | 4.1:-76919821 | MS.gene073527:CDS |
| TCCCGGTAGCATCTCGTATA+AGG | 0.330031 | 4.1:+76920118 | None:intergenic |
| TTCGGGCTCCGGCATCGTCT+TGG | 0.333568 | 4.1:+76921192 | None:intergenic |
| GGCCAGAAATGTTGTGATCT+TGG | 0.339336 | 4.1:-76920947 | MS.gene073527:CDS |
| ACCTTCATCCTCAATCTTCC+CGG | 0.355259 | 4.1:+76920101 | None:intergenic |
| TCATTGAAATATTCCATGTT+TGG | 0.355934 | 4.1:+76920689 | None:intergenic |
| GTGGAGTTGGGCTTGCTTTG+AGG | 0.358617 | 4.1:-76920214 | MS.gene073527:CDS |
| ATTAGGTTTAGTTGCTACTT+TGG | 0.363302 | 4.1:+76920358 | None:intergenic |
| ATTCAAATATGTTACACCTT+TGG | 0.365669 | 4.1:+76921057 | None:intergenic |
| GTGGCATGGGGAAAGGCATT+TGG | 0.376216 | 4.1:-76919943 | MS.gene073527:CDS |
| TACAACCTCATGGAGGAGTT+TGG | 0.377411 | 4.1:+76921084 | None:intergenic |
| CAAAAGCGCGTGGTGAAGTC+CGG | 0.379401 | 4.1:-76920389 | MS.gene073527:CDS |
| CATGACACGGTCCGGTGGCA+TGG | 0.385994 | 4.1:-76919957 | MS.gene073527:CDS |
| TCGGGCTCCGGCATCGTCTT+GGG | 0.396084 | 4.1:+76921193 | None:intergenic |
| GGAATACATGGCAGAATTAG+AGG | 0.396823 | 4.1:-76920777 | MS.gene073527:CDS |
| ATGCCGAGGGTTTCGGGCTC+CGG | 0.397498 | 4.1:+76921181 | None:intergenic |
| TGATAAAACGGTTGGGATCA+TGG | 0.398712 | 4.1:-76920600 | MS.gene073527:CDS |
| TCCATGTTTGGCTTGAGACT+TGG | 0.400728 | 4.1:+76920701 | None:intergenic |
| TTAGTTGCTACTTTGGAAAT+CGG | 0.410217 | 4.1:+76920365 | None:intergenic |
| GAGAGTTGTATGGCAGCTTT+CGG | 0.410983 | 4.1:+76920870 | None:intergenic |
| ATGACACGGTCCGGTGGCAT+GGG | 0.413503 | 4.1:-76919956 | MS.gene073527:CDS |
| GTTCGGCAGCGGCGAGGGTG+AGG | 0.414338 | 4.1:+76921014 | None:intergenic |
| ACTCCACCCACTGTTGATAG+TGG | 0.416514 | 4.1:+76920230 | None:intergenic |
| CGAAGGATGGCGGGAGGCAG+TGG | 0.420316 | 4.1:-76920012 | MS.gene073527:CDS |
| GAGGCGACACATGGTCTTAC+CGG | 0.422452 | 4.1:+76921144 | None:intergenic |
| CTCGCTGGCCGAAGGATGGC+GGG | 0.427501 | 4.1:-76920021 | MS.gene073527:CDS |
| CCCAACCAACACTTCCACTA+TGG | 0.427548 | 4.1:+76919839 | None:intergenic |
| GGAGGCAGTGGAGGAACTAA+TGG | 0.432703 | 4.1:-76920000 | MS.gene073527:CDS |
| CACTGCCTCCCGCCATCCTT+CGG | 0.435354 | 4.1:+76920013 | None:intergenic |
| GTCGAGCTCCTCGAGGCGTT+CGG | 0.435485 | 4.1:+76920997 | None:intergenic |
| CTCCTCGAGGCGTTCGGCAG+CGG | 0.438208 | 4.1:+76921003 | None:intergenic |
| AAAGCAAGTGCAAAATTTCA+AGG | 0.441316 | 4.1:-76920648 | MS.gene073527:CDS |
| GGAGACAACGCTCCGCCAAT+AGG | 0.441418 | 4.1:+76920177 | None:intergenic |
| GAAACAAACATTTGATAAAA+CGG | 0.442033 | 4.1:-76920612 | MS.gene073527:CDS |
| CAAACATTTGATAAAACGGT+TGG | 0.445795 | 4.1:-76920608 | MS.gene073527:CDS |
| TTGAATTATGATACAATTCA+CGG | 0.446923 | 4.1:+76920447 | None:intergenic |
| TATCAACAGTGGGTGGAGTT+GGG | 0.453458 | 4.1:-76920226 | MS.gene073527:CDS |
| GCCATAGTGGAAGTGTTGGT+TGG | 0.454513 | 4.1:-76919840 | MS.gene073527:CDS |
| CGGTCCGGTGGCATGGGGAA+AGG | 0.456055 | 4.1:-76919950 | MS.gene073527:CDS |
| ATTAATGTATGCTCCGAAAA+CGG | 0.456639 | 4.1:+76920541 | None:intergenic |
| AAACTCATCTCCGCAACCTC+TGG | 0.460643 | 4.1:-76920815 | MS.gene073527:CDS |
| ACTCGCTGGCCGAAGGATGG+CGG | 0.464020 | 4.1:-76920022 | MS.gene073527:CDS |
| CTATTCTGCCATGGAATACA+TGG | 0.470183 | 4.1:-76920789 | MS.gene073527:CDS |
| GATGAATGGTAATAATGATA+AGG | 0.470751 | 4.1:-76920267 | MS.gene073527:CDS |
| AGAATAGAGACCAGAGGTTG+CGG | 0.471407 | 4.1:+76920805 | None:intergenic |
| CTATCAACAGTGGGTGGAGT+TGG | 0.476016 | 4.1:-76920227 | MS.gene073527:CDS |
| CTCCAACTGTCGCGGGCGCG+TGG | 0.476734 | 4.1:+76920156 | None:intergenic |
| CAAATCACGGTGTTTCAGAA+TGG | 0.477832 | 4.1:-76920427 | MS.gene073527:CDS |
| CAACTAAACCTAATGTGATA+AGG | 0.478852 | 4.1:-76920349 | MS.gene073527:CDS |
| GGCATCCTCGCCTTTGACGC+CGG | 0.480797 | 4.1:-76921163 | MS.gene073527:CDS |
| AATTACACCTTGTTTAAGAT+CGG | 0.483559 | 4.1:+76920898 | None:intergenic |
| CCATAGTGGAAGTGTTGGTT+GGG | 0.488653 | 4.1:-76919839 | MS.gene073527:CDS |
| CTCCACGCGCCCGCGACAGT+TGG | 0.489465 | 4.1:-76920158 | MS.gene073527:CDS |
| GAGGCGTTCGGCAGCGGCGA+GGG | 0.495495 | 4.1:+76921009 | None:intergenic |
| GGTGATTTCTTCGTCGGAGA+GGG | 0.496674 | 4.1:+76921105 | None:intergenic |
| AAACATTTGATAAAACGGTT+GGG | 0.497251 | 4.1:-76920607 | MS.gene073527:CDS |
| GAGTTTGGTGATTTCTTCGT+CGG | 0.499213 | 4.1:+76921099 | None:intergenic |
| ATAGAGCTCCGAGAGTTGTA+TGG | 0.505072 | 4.1:+76920860 | None:intergenic |
| GCCTTATACGAGATGCTACC+GGG | 0.508415 | 4.1:-76920119 | MS.gene073527:CDS |
| TGCTACTTTGGAAATCGGCC+CGG | 0.509342 | 4.1:+76920370 | None:intergenic |
| GGCACTCGCTGGCCGAAGGA+TGG | 0.509889 | 4.1:-76920025 | MS.gene073527:CDS |
| CATGGTCTTACCGGCGTCAA+AGG | 0.512290 | 4.1:+76921153 | None:intergenic |
| GTATGCTAATGTGATCCTAT+TGG | 0.512424 | 4.1:-76920192 | MS.gene073527:CDS |
| GAAGGCAGAGACTGCCATAG+TGG | 0.513473 | 4.1:-76919853 | MS.gene073527:CDS |
| GGGAGTTGTAGAGGGAGATG+AGG | 0.514614 | 4.1:+76921125 | None:intergenic |
| AAGGTAAAGGCGAAGCTAAA+GGG | 0.517234 | 4.1:-76920083 | MS.gene073527:CDS |
| GCGTCCTCTCCAACTGTCGC+GGG | 0.517317 | 4.1:+76920149 | None:intergenic |
| AGGATGGCGGGAGGCAGTGG+AGG | 0.517645 | 4.1:-76920009 | MS.gene073527:CDS |
| GAAGCAAAATCCATTGGCAT+AGG | 0.519889 | 4.1:+76920314 | None:intergenic |
| TGCGTCCTCTCCAACTGTCG+CGG | 0.521818 | 4.1:+76920148 | None:intergenic |
| AAAGGGACGGTGGGCGAAAG+AGG | 0.522218 | 4.1:-76920066 | MS.gene073527:CDS |
| AATGCCTTTCCCCATGCCAC+CGG | 0.525405 | 4.1:+76919946 | None:intergenic |
| ACTAATGGAATGGCTGTCTC+CGG | 0.525887 | 4.1:-76919985 | MS.gene073527:CDS |
| GGCCTTATACGAGATGCTAC+CGG | 0.527085 | 4.1:-76920120 | MS.gene073527:CDS |
| ATGCCGGAGCCCGAAACCCT+CGG | 0.527389 | 4.1:-76921184 | MS.gene073527:CDS |
| GAAGGTAAAGGCGAAGCTAA+AGG | 0.529142 | 4.1:-76920084 | MS.gene073527:CDS |
| CGGTGGCACATGACACGGTC+CGG | 0.530182 | 4.1:-76919965 | MS.gene073527:CDS |
| AAAAGCGCGTGGTGAAGTCC+GGG | 0.531016 | 4.1:-76920388 | MS.gene073527:CDS |
| AGATGCTACCGGGAAGATTG+AGG | 0.533778 | 4.1:-76920109 | MS.gene073527:CDS |
| AGGACATGACGGGCACTCGC+TGG | 0.537487 | 4.1:-76920036 | MS.gene073527:CDS |
| CGAGGCGTTCGGCAGCGGCG+AGG | 0.538162 | 4.1:+76921008 | None:intergenic |
| CTCCACCCACTGTTGATAGT+GGG | 0.538265 | 4.1:+76920231 | None:intergenic |
| CGTCGGAGAGGGAGTTGTAG+AGG | 0.538811 | 4.1:+76921116 | None:intergenic |
| CGCCGCTGCCGAACGCCTCG+AGG | 0.540932 | 4.1:-76921005 | MS.gene073527:CDS |
| CTCTGGTCTCTATTCTGCCA+TGG | 0.545017 | 4.1:-76920798 | MS.gene073527:CDS |
| GACGGGCACTCGCTGGCCGA+AGG | 0.545279 | 4.1:-76920029 | MS.gene073527:CDS |
| CGTCTTGGGACGCCGTGACA+TGG | 0.547021 | 4.1:+76921207 | None:intergenic |
| ACAACATTTCTGGCCTATAC+GGG | 0.547369 | 4.1:+76920955 | None:intergenic |
| CGGCAGCGGCGAGGGTGAGG+AGG | 0.553195 | 4.1:+76921017 | None:intergenic |
| GCCGTTACTGTCTCCCGTAT+AGG | 0.555645 | 4.1:-76920968 | MS.gene073527:CDS |
| TGCTAATGTGATCCTATTGG+CGG | 0.555981 | 4.1:-76920189 | MS.gene073527:CDS |
| GTCGGAGAGGGAGTTGTAGA+GGG | 0.558708 | 4.1:+76921117 | None:intergenic |
| CATGGCAGAATTAGAGGCCG+CGG | 0.559813 | 4.1:-76920771 | MS.gene073527:CDS |
| ACGGCGTCCCAAGACGATGC+CGG | 0.560395 | 4.1:-76921200 | MS.gene073527:CDS |
| TTGTATCATAATTCAAATCA+CGG | 0.562907 | 4.1:-76920440 | MS.gene073527:CDS |
| GAAAGCTGCCATACAACTCT+CGG | 0.563189 | 4.1:-76920868 | MS.gene073527:CDS |
| TAATTCTGCCATGTATTCCA+TGG | 0.568001 | 4.1:+76920781 | None:intergenic |
| GCATTACTCTGATTTGGAGA+AGG | 0.568074 | 4.1:-76919871 | MS.gene073527:CDS |
| AAGATTGAGGATGAAGGTAA+AGG | 0.568089 | 4.1:-76920096 | MS.gene073527:CDS |
| ACCAAGTCTCAAGCCAAACA+TGG | 0.570002 | 4.1:-76920702 | MS.gene073527:CDS |
| CGACCAGAAGCAAAATCCAT+TGG | 0.571841 | 4.1:+76920308 | None:intergenic |
| TCTCAACAACCCTATGCCAA+TGG | 0.573016 | 4.1:-76920324 | MS.gene073527:CDS |
| AGGAAGACGAAGGACATGAC+GGG | 0.576707 | 4.1:-76920046 | MS.gene073527:CDS |
| GGCGAAGCTAAAGGGACGGT+GGG | 0.578940 | 4.1:-76920075 | MS.gene073527:CDS |
| GTCTCCGGTGGCACATGACA+CGG | 0.580006 | 4.1:-76919970 | MS.gene073527:CDS |
| GAGGAAGACGAAGGACATGA+CGG | 0.581220 | 4.1:-76920047 | MS.gene073527:CDS |
| GTTTAAGATCGGCGTAGACA+AGG | 0.581591 | 4.1:+76920909 | None:intergenic |
| AAGCAAAATCCATTGGCATA+GGG | 0.583126 | 4.1:+76920315 | None:intergenic |
| TATCAAGATCATTGAGAAAG+CGG | 0.584982 | 4.1:-76920840 | MS.gene073527:CDS |
| CGTCAAAGGCGAGGATGCCG+AGG | 0.586508 | 4.1:+76921167 | None:intergenic |
| ACCGGGAAGATTGAGGATGA+AGG | 0.596287 | 4.1:-76920102 | MS.gene073527:CDS |
| TGACACGGTCCGGTGGCATG+GGG | 0.596448 | 4.1:-76919955 | MS.gene073527:CDS |
| TGGTGATTTCTTCGTCGGAG+AGG | 0.599109 | 4.1:+76921104 | None:intergenic |
| CGCGCCCGCGACAGTTGGAG+AGG | 0.602717 | 4.1:-76920153 | MS.gene073527:CDS |
| GTGTATATTGGTGTGAGAGA+AGG | 0.603744 | 4.1:-76919809 | MS.gene073527:CDS |
| GACTGCCATAGTGGAAGTGT+TGG | 0.604067 | 4.1:-76919844 | MS.gene073527:CDS |
| CAGTGGAGGAACTAATGGAA+TGG | 0.604273 | 4.1:-76919995 | MS.gene073527:CDS |
| CATGAGGTTGTAAAATCCAA+AGG | 0.609869 | 4.1:-76921073 | MS.gene073527:CDS |
| GGAACTGAGAAAATGATGAA+TGG | 0.609978 | 4.1:-76920281 | MS.gene073527:CDS |
| TGGCACATGACACGGTCCGG+TGG | 0.613665 | 4.1:-76919962 | MS.gene073527:CDS |
| GTTGTGATCTTGGCTTAGCG+AGG | 0.614453 | 4.1:-76920937 | MS.gene073527:CDS |
| CGGACCGTGTCATGTGCCAC+CGG | 0.615297 | 4.1:+76919966 | None:intergenic |
| GAGGGAGATGAGGCGACACA+TGG | 0.620252 | 4.1:+76921135 | None:intergenic |
| AAACGGTTGGGATCATGGCA+AGG | 0.621569 | 4.1:-76920595 | MS.gene073527:CDS |
| GGTGTTCCAGAAGGCAACAA+TGG | 0.622560 | 4.1:+76920468 | None:intergenic |
| ACAATTCACGGTGTTCCAGA+AGG | 0.624994 | 4.1:+76920459 | None:intergenic |
| AGTTGGAGAGGACGCACGTG+AGG | 0.630790 | 4.1:-76920141 | MS.gene073527:CDS |
| CTCGCCCCACTATCAACAGT+GGG | 0.632878 | 4.1:-76920236 | MS.gene073527:CDS |
| AATGGAATGGCTGTCTCCGG+TGG | 0.635605 | 4.1:-76919982 | MS.gene073527:CDS |
| GTCAAAGGCGAGGATGCCGA+GGG | 0.638397 | 4.1:+76921168 | None:intergenic |
| GGAGTTGATTGTGATGGTCG+TGG | 0.639920 | 4.1:-76921233 | None:intergenic |
| GCCTATACGGGAGACAGTAA+CGG | 0.642874 | 4.1:+76920967 | None:intergenic |
| TGGTCGTGGCTACCATGTCA+CGG | 0.644384 | 4.1:-76921219 | MS.gene073527:CDS |
| TCCACCCACTGTTGATAGTG+GGG | 0.645257 | 4.1:+76920232 | None:intergenic |
| AGGCGAAGCTAAAGGGACGG+TGG | 0.650016 | 4.1:-76920076 | MS.gene073527:CDS |
| GCCCCACTATCAACAGTGGG+TGG | 0.653435 | 4.1:-76920233 | MS.gene073527:CDS |
| TCTTACCGGCGTCAAAGGCG+AGG | 0.655393 | 4.1:+76921158 | None:intergenic |
| GTCTACGCCGATCTTAAACA+AGG | 0.667452 | 4.1:-76920905 | MS.gene073527:CDS |
| GCTGGCCGAAGGATGGCGGG+AGG | 0.668905 | 4.1:-76920018 | MS.gene073527:CDS |
| GAGATTCGAGACAAAGCCTA+CGG | 0.670930 | 4.1:-76919913 | MS.gene073527:CDS |
| GCTCGCCCCACTATCAACAG+TGG | 0.671297 | 4.1:-76920237 | MS.gene073527:CDS |
| GGAAGCACTCCAAAAGCGCG+TGG | 0.676474 | 4.1:-76920399 | MS.gene073527:CDS |
| GTCTGCAGAAGCATCGCCGT+AGG | 0.681125 | 4.1:+76919897 | None:intergenic |
| CGGTGTTGTCGAGCTCCTCG+AGG | 0.682713 | 4.1:+76920990 | None:intergenic |
| TAAAGGCGAAGCTAAAGGGA+CGG | 0.687543 | 4.1:-76920079 | MS.gene073527:CDS |
| CGGTGTTTCAGAATGGTACG+AGG | 0.698741 | 4.1:-76920420 | MS.gene073527:CDS |
| TGGGCGAAAGAGGAAGACGA+AGG | 0.704118 | 4.1:-76920056 | MS.gene073527:CDS |
| CATGGCAGAATAGAGACCAG+AGG | 0.720520 | 4.1:+76920799 | None:intergenic |
| AATCACCAAACTCCTCCATG+AGG | 0.743168 | 4.1:-76921089 | MS.gene073527:CDS |
| TATACGGGAGACAGTAACGG+CGG | 0.803788 | 4.1:+76920970 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAACAAACATTTGATAAAA+CGG | - | chr4.1:76920411-76920430 | MS.gene073527:CDS | 20.0% |
| !! | TTGAATTATGATACAATTCA+CGG | + | chr4.1:76920579-76920598 | None:intergenic | 20.0% |
| !! | TTGTATCATAATTCAAATCA+CGG | - | chr4.1:76920583-76920602 | MS.gene073527:CDS | 20.0% |
| ! | AAACATTTGATAAAACGGTT+GGG | - | chr4.1:76920416-76920435 | MS.gene073527:CDS | 25.0% |
| ! | ATTCAAATATGTTACACCTT+TGG | + | chr4.1:76919969-76919988 | None:intergenic | 25.0% |
| ! | ATTTCAAGGAAACATCATTA+TGG | - | chr4.1:76920389-76920408 | MS.gene073527:CDS | 25.0% |
| ! | GATGAATGGTAATAATGATA+AGG | - | chr4.1:76920756-76920775 | MS.gene073527:CDS | 25.0% |
| ! | TCATTGAAATATTCCATGTT+TGG | + | chr4.1:76920337-76920356 | None:intergenic | 25.0% |
| !! | AATTACACCTTGTTTAAGAT+CGG | + | chr4.1:76920128-76920147 | None:intergenic | 25.0% |
| AAAGCAAGTGCAAAATTTCA+AGG | - | chr4.1:76920375-76920394 | MS.gene073527:CDS | 30.0% | |
| ATTAATGTATGCTCCGAAAA+CGG | + | chr4.1:76920485-76920504 | None:intergenic | 30.0% | |
| CAAACATTTGATAAAACGGT+TGG | - | chr4.1:76920415-76920434 | MS.gene073527:CDS | 30.0% | |
| CAACTAAACCTAATGTGATA+AGG | - | chr4.1:76920674-76920693 | MS.gene073527:CDS | 30.0% | |
| TATCAAGATCATTGAGAAAG+CGG | - | chr4.1:76920183-76920202 | MS.gene073527:CDS | 30.0% | |
| TTGAGAAACCTTATCACATT+AGG | + | chr4.1:76920685-76920704 | None:intergenic | 30.0% | |
| ! | ATTAGGTTTAGTTGCTACTT+TGG | + | chr4.1:76920668-76920687 | None:intergenic | 30.0% |
| !! | TTAGTTGCTACTTTGGAAAT+CGG | + | chr4.1:76920661-76920680 | None:intergenic | 30.0% |
| !!! | AATTCCATGCTTTTTGGTTT+TGG | - | chr4.1:76920526-76920545 | MS.gene073527:CDS | 30.0% |
| !!! | ATTCCATGCTTTTTGGTTTT+GGG | - | chr4.1:76920527-76920546 | MS.gene073527:CDS | 30.0% |
| AAACCCAAAACCAAAAAGCA+TGG | + | chr4.1:76920533-76920552 | None:intergenic | 35.0% | |
| AAGATTGAGGATGAAGGTAA+AGG | - | chr4.1:76920927-76920946 | MS.gene073527:CDS | 35.0% | |
| AAGCAAAATCCATTGGCATA+GGG | + | chr4.1:76920711-76920730 | None:intergenic | 35.0% | |
| CATGAGGTTGTAAAATCCAA+AGG | - | chr4.1:76919950-76919969 | MS.gene073527:CDS | 35.0% | |
| GACAACAACAACAACGTTAT+TGG | - | chr4.1:76920284-76920303 | MS.gene073527:CDS | 35.0% | |
| GACATTGCATTACTCTGATT+TGG | - | chr4.1:76921146-76921165 | MS.gene073527:CDS | 35.0% | |
| GGAACTGAGAAAATGATGAA+TGG | - | chr4.1:76920742-76920761 | MS.gene073527:CDS | 35.0% | |
| GTATGCTAATGTGATCCTAT+TGG | - | chr4.1:76920831-76920850 | MS.gene073527:CDS | 35.0% | |
| TAATTCTGCCATGTATTCCA+TGG | + | chr4.1:76920245-76920264 | None:intergenic | 35.0% | |
| ! | AACAGCAATTCCATGCTTTT+TGG | - | chr4.1:76920520-76920539 | MS.gene073527:CDS | 35.0% |
| ! | CTTTGGATTTTACAACCTCA+TGG | + | chr4.1:76919952-76919971 | None:intergenic | 35.0% |
| !! | TTGGGTTGAGTTGTGTATAT+TGG | - | chr4.1:76921202-76921221 | MS.gene073527:CDS | 35.0% |
| !!! | TTGTTGTCTTTTTTTCTCCG+CGG | + | chr4.1:76920272-76920291 | None:intergenic | 35.0% |
| AAGGTAAAGGCGAAGCTAAA+GGG | - | chr4.1:76920940-76920959 | MS.gene073527:CDS | 40.0% | |
| AGCCAAGATCACAACATTTC+TGG | + | chr4.1:76920081-76920100 | None:intergenic | 40.0% | |
| CAAATCACGGTGTTTCAGAA+TGG | - | chr4.1:76920596-76920615 | MS.gene073527:CDS | 40.0% | |
| CTATTCTGCCATGGAATACA+TGG | - | chr4.1:76920234-76920253 | MS.gene073527:CDS | 40.0% | |
| GAAGCAAAATCCATTGGCAT+AGG | + | chr4.1:76920712-76920731 | None:intergenic | 40.0% | |
| GGAATACATGGCAGAATTAG+AGG | - | chr4.1:76920246-76920265 | MS.gene073527:CDS | 40.0% | |
| GTGTATATTGGTGTGAGAGA+AGG | - | chr4.1:76921214-76921233 | MS.gene073527:CDS | 40.0% | |
| TGATAAAACGGTTGGGATCA+TGG | - | chr4.1:76920423-76920442 | MS.gene073527:CDS | 40.0% | |
| TGCTAATGTGATCCTATTGG+CGG | - | chr4.1:76920834-76920853 | MS.gene073527:CDS | 40.0% | |
| ! | GAGTTTGGTGATTTCTTCGT+CGG | + | chr4.1:76919927-76919946 | None:intergenic | 40.0% |
| ! | TGGATTTTACAACCTCATGG+AGG | + | chr4.1:76919949-76919968 | None:intergenic | 40.0% |
| !! | ACAACATTTCTGGCCTATAC+GGG | + | chr4.1:76920071-76920090 | None:intergenic | 40.0% |
| !! | ATGCCAATGGATTTTGCTTC+TGG | - | chr4.1:76920712-76920731 | MS.gene073527:CDS | 40.0% |
| !! | CACAACATTTCTGGCCTATA+CGG | + | chr4.1:76920072-76920091 | None:intergenic | 40.0% |
| !! | GCAAGAATTTGCTCCGTTTT+CGG | - | chr4.1:76920469-76920488 | MS.gene073527:CDS | 40.0% |
| !! | GCATTACTCTGATTTGGAGA+AGG | - | chr4.1:76921152-76921171 | MS.gene073527:CDS | 40.0% |
| AATCACCAAACTCCTCCATG+AGG | - | chr4.1:76919934-76919953 | MS.gene073527:CDS | 45.0% | |
| ACAATTCACGGTGTTCCAGA+AGG | + | chr4.1:76920567-76920586 | None:intergenic | 45.0% | |
| ACCAAGTCTCAAGCCAAACA+TGG | - | chr4.1:76920321-76920340 | MS.gene073527:CDS | 45.0% | |
| ACCTTCATCCTCAATCTTCC+CGG | + | chr4.1:76920925-76920944 | None:intergenic | 45.0% | |
| ACTAATGGAATGGCTGTCTC+CGG | - | chr4.1:76921038-76921057 | MS.gene073527:CDS | 45.0% | |
| AGAATAGAGACCAGAGGTTG+CGG | + | chr4.1:76920221-76920240 | None:intergenic | 45.0% | |
| ATAGAGCTCCGAGAGTTGTA+TGG | + | chr4.1:76920166-76920185 | None:intergenic | 45.0% | |
| CAGTGGAGGAACTAATGGAA+TGG | - | chr4.1:76921028-76921047 | MS.gene073527:CDS | 45.0% | |
| CGACCAGAAGCAAAATCCAT+TGG | + | chr4.1:76920718-76920737 | None:intergenic | 45.0% | |
| GAAAGCTGCCATACAACTCT+CGG | - | chr4.1:76920155-76920174 | MS.gene073527:CDS | 45.0% | |
| GAAGGTAAAGGCGAAGCTAA+AGG | - | chr4.1:76920939-76920958 | MS.gene073527:CDS | 45.0% | |
| GAGAGTTGTATGGCAGCTTT+CGG | + | chr4.1:76920156-76920175 | None:intergenic | 45.0% | |
| GAGATTCGAGACAAAGCCTA+CGG | - | chr4.1:76921110-76921129 | MS.gene073527:CDS | 45.0% | |
| GGCCAGAAATGTTGTGATCT+TGG | - | chr4.1:76920076-76920095 | MS.gene073527:CDS | 45.0% | |
| GTCTACGCCGATCTTAAACA+AGG | - | chr4.1:76920118-76920137 | MS.gene073527:CDS | 45.0% | |
| GTTTGACCATTGTTGCCTTC+TGG | - | chr4.1:76920549-76920568 | MS.gene073527:CDS | 45.0% | |
| TAAAGGCGAAGCTAAAGGGA+CGG | - | chr4.1:76920944-76920963 | MS.gene073527:CDS | 45.0% | |
| TACAACCTCATGGAGGAGTT+TGG | + | chr4.1:76919942-76919961 | None:intergenic | 45.0% | |
| TATCAACAGTGGGTGGAGTT+GGG | - | chr4.1:76920797-76920816 | MS.gene073527:CDS | 45.0% | |
| TCTCAACAACCCTATGCCAA+TGG | - | chr4.1:76920699-76920718 | MS.gene073527:CDS | 45.0% | |
| ! | GAGGAGGAAATTTTCTTGGC+TGG | + | chr4.1:76919993-76920012 | None:intergenic | 45.0% |
| ! | GATTTTGCTTCTGGTCGTGA+CGG | - | chr4.1:76920721-76920740 | MS.gene073527:CDS | 45.0% |
| ! | GGGTGAGGAGGAAATTTTCT+TGG | + | chr4.1:76919997-76920016 | None:intergenic | 45.0% |
| ! | GTTTAAGATCGGCGTAGACA+AGG | + | chr4.1:76920117-76920136 | None:intergenic | 45.0% |
| !! | CCATAGTGGAAGTGTTGGTT+GGG | - | chr4.1:76921184-76921203 | MS.gene073527:CDS | 45.0% |
| !! | TCCATGTTTGGCTTGAGACT+TGG | + | chr4.1:76920325-76920344 | None:intergenic | 45.0% |
| AAACGGTTGGGATCATGGCA+AGG | - | chr4.1:76920428-76920447 | MS.gene073527:CDS | 50.0% | |
| AAACTCATCTCCGCAACCTC+TGG | - | chr4.1:76920208-76920227 | MS.gene073527:CDS | 50.0% | |
| ACCGGGAAGATTGAGGATGA+AGG | - | chr4.1:76920921-76920940 | MS.gene073527:CDS | 50.0% | |
| AGATGCTACCGGGAAGATTG+AGG | - | chr4.1:76920914-76920933 | MS.gene073527:CDS | 50.0% | |
| AGGAAGACGAAGGACATGAC+GGG | - | chr4.1:76920977-76920996 | MS.gene073527:CDS | 50.0% | |
| CATGGCAGAATAGAGACCAG+AGG | + | chr4.1:76920227-76920246 | None:intergenic | 50.0% | |
| CCCAACCAACACTTCCACTA+TGG | + | chr4.1:76921187-76921206 | None:intergenic | 50.0% | |
| CGGTGTTTCAGAATGGTACG+AGG | - | chr4.1:76920603-76920622 | MS.gene073527:CDS | 50.0% | |
| CTATCAACAGTGGGTGGAGT+TGG | - | chr4.1:76920796-76920815 | MS.gene073527:CDS | 50.0% | |
| CTCTGGTCTCTATTCTGCCA+TGG | - | chr4.1:76920225-76920244 | MS.gene073527:CDS | 50.0% | |
| GAGGAAGACGAAGGACATGA+CGG | - | chr4.1:76920976-76920995 | MS.gene073527:CDS | 50.0% | |
| GCCTATACGGGAGACAGTAA+CGG | + | chr4.1:76920059-76920078 | None:intergenic | 50.0% | |
| GCCTTATACGAGATGCTACC+GGG | - | chr4.1:76920904-76920923 | MS.gene073527:CDS | 50.0% | |
| GGTGATTTCTTCGTCGGAGA+GGG | + | chr4.1:76919921-76919940 | None:intergenic | 50.0% | |
| GGTGTTCCAGAAGGCAACAA+TGG | + | chr4.1:76920558-76920577 | None:intergenic | 50.0% | |
| GTTGTGATCTTGGCTTAGCG+AGG | - | chr4.1:76920086-76920105 | MS.gene073527:CDS | 50.0% | |
| TATACGGGAGACAGTAACGG+CGG | + | chr4.1:76920056-76920075 | None:intergenic | 50.0% | |
| TCCCGGTAGCATCTCGTATA+AGG | + | chr4.1:76920908-76920927 | None:intergenic | 50.0% | |
| TGGTGATTTCTTCGTCGGAG+AGG | + | chr4.1:76919922-76919941 | None:intergenic | 50.0% | |
| ! | ACTCCACCCACTGTTGATAG+TGG | + | chr4.1:76920796-76920815 | None:intergenic | 50.0% |
| ! | GACTGCCATAGTGGAAGTGT+TGG | - | chr4.1:76921179-76921198 | MS.gene073527:CDS | 50.0% |
| ! | GGCCTTATACGAGATGCTAC+CGG | - | chr4.1:76920903-76920922 | MS.gene073527:CDS | 50.0% |
| !! | CTCCACCCACTGTTGATAGT+GGG | + | chr4.1:76920795-76920814 | None:intergenic | 50.0% |
| !! | GCCATAGTGGAAGTGTTGGT+TGG | - | chr4.1:76921183-76921202 | MS.gene073527:CDS | 50.0% |
| !! | TCCACCCACTGTTGATAGTG+GGG | + | chr4.1:76920794-76920813 | None:intergenic | 50.0% |
| !! | TGCTACTTTGGAAATCGGCC+CGG | + | chr4.1:76920656-76920675 | None:intergenic | 50.0% |
| AATGCCTTTCCCCATGCCAC+CGG | + | chr4.1:76921080-76921099 | None:intergenic | 55.0% | |
| AATGGAATGGCTGTCTCCGG+TGG | - | chr4.1:76921041-76921060 | MS.gene073527:CDS | 55.0% | |
| CATGGCAGAATTAGAGGCCG+CGG | - | chr4.1:76920252-76920271 | MS.gene073527:CDS | 55.0% | |
| CTCGCCCCACTATCAACAGT+GGG | - | chr4.1:76920787-76920806 | MS.gene073527:CDS | 55.0% | |
| GAAGGCAGAGACTGCCATAG+TGG | - | chr4.1:76921170-76921189 | MS.gene073527:CDS | 55.0% | |
| GCCGTTACTGTCTCCCGTAT+AGG | - | chr4.1:76920055-76920074 | MS.gene073527:CDS | 55.0% | |
| GGAGGCAGTGGAGGAACTAA+TGG | - | chr4.1:76921023-76921042 | MS.gene073527:CDS | 55.0% | |
| GGGAGTTGTAGAGGGAGATG+AGG | + | chr4.1:76919901-76919920 | None:intergenic | 55.0% | |
| GTCGGAGAGGGAGTTGTAGA+GGG | + | chr4.1:76919909-76919928 | None:intergenic | 55.0% | |
| TGGGCGAAAGAGGAAGACGA+AGG | - | chr4.1:76920967-76920986 | MS.gene073527:CDS | 55.0% | |
| TGGTCGTGGCTACCATGTCA+CGG | - | chr4.1:76919804-76919823 | MS.gene073527:CDS | 55.0% | |
| ! | AAAAGCGCGTGGTGAAGTCC+GGG | - | chr4.1:76920635-76920654 | MS.gene073527:CDS | 55.0% |
| ! | CAAAAGCGCGTGGTGAAGTC+CGG | - | chr4.1:76920634-76920653 | MS.gene073527:CDS | 55.0% |
| ! | CATGGTCTTACCGGCGTCAA+AGG | + | chr4.1:76919873-76919892 | None:intergenic | 55.0% |
| ! | GAGGCGACACATGGTCTTAC+CGG | + | chr4.1:76919882-76919901 | None:intergenic | 55.0% |
| ! | GTGGAGTTGGGCTTGCTTTG+AGG | - | chr4.1:76920809-76920828 | MS.gene073527:CDS | 55.0% |
| !! | GTGGCATGGGGAAAGGCATT+TGG | - | chr4.1:76921080-76921099 | MS.gene073527:CDS | 55.0% |
| AAAGGGACGGTGGGCGAAAG+AGG | - | chr4.1:76920957-76920976 | MS.gene073527:CDS | 60.0% | |
| AGGCGAAGCTAAAGGGACGG+TGG | - | chr4.1:76920947-76920966 | MS.gene073527:CDS | 60.0% | |
| AGTTGGAGAGGACGCACGTG+AGG | - | chr4.1:76920882-76920901 | MS.gene073527:CDS | 60.0% | |
| ATGACACGGTCCGGTGGCAT+GGG | - | chr4.1:76921067-76921086 | MS.gene073527:CDS | 60.0% | |
| CGTCGGAGAGGGAGTTGTAG+AGG | + | chr4.1:76919910-76919929 | None:intergenic | 60.0% | |
| GAGGGAGATGAGGCGACACA+TGG | + | chr4.1:76919891-76919910 | None:intergenic | 60.0% | |
| GCCCCACTATCAACAGTGGG+TGG | - | chr4.1:76920790-76920809 | MS.gene073527:CDS | 60.0% | |
| GCTCGCCCCACTATCAACAG+TGG | - | chr4.1:76920786-76920805 | MS.gene073527:CDS | 60.0% | |
| GGAGACAACGCTCCGCCAAT+AGG | + | chr4.1:76920849-76920868 | None:intergenic | 60.0% | |
| GGCGAAGCTAAAGGGACGGT+GGG | - | chr4.1:76920948-76920967 | MS.gene073527:CDS | 60.0% | |
| GTCAAAGGCGAGGATGCCGA+GGG | + | chr4.1:76919858-76919877 | None:intergenic | 60.0% | |
| GTCTCCGGTGGCACATGACA+CGG | - | chr4.1:76921053-76921072 | MS.gene073527:CDS | 60.0% | |
| TCTTACCGGCGTCAAAGGCG+AGG | + | chr4.1:76919868-76919887 | None:intergenic | 60.0% | |
| TGCGTCCTCTCCAACTGTCG+CGG | + | chr4.1:76920878-76920897 | None:intergenic | 60.0% | |
| ! | CGGACTTCACCACGCGCTTT+TGG | + | chr4.1:76920636-76920655 | None:intergenic | 60.0% |
| !! | GGAAGCACTCCAAAAGCGCG+TGG | - | chr4.1:76920624-76920643 | MS.gene073527:CDS | 60.0% |
| !! | GTCTGCAGAAGCATCGCCGT+AGG | + | chr4.1:76921129-76921148 | None:intergenic | 60.0% |
| ACGGCGTCCCAAGACGATGC+CGG | - | chr4.1:76919823-76919842 | MS.gene073527:CDS | 65.0% | |
| ACTCGCTGGCCGAAGGATGG+CGG | - | chr4.1:76921001-76921020 | MS.gene073527:CDS | 65.0% | |
| ATGCCGAGGGTTTCGGGCTC+CGG | + | chr4.1:76919845-76919864 | None:intergenic | 65.0% | |
| ATGCCGGAGCCCGAAACCCT+CGG | - | chr4.1:76919839-76919858 | MS.gene073527:CDS | 65.0% | |
| CACTGCCTCCCGCCATCCTT+CGG | + | chr4.1:76921013-76921032 | None:intergenic | 65.0% | |
| CATGACACGGTCCGGTGGCA+TGG | - | chr4.1:76921066-76921085 | MS.gene073527:CDS | 65.0% | |
| CGGACCGTGTCATGTGCCAC+CGG | + | chr4.1:76921060-76921079 | None:intergenic | 65.0% | |
| CGGTGGCACATGACACGGTC+CGG | - | chr4.1:76921058-76921077 | MS.gene073527:CDS | 65.0% | |
| CGTCAAAGGCGAGGATGCCG+AGG | + | chr4.1:76919859-76919878 | None:intergenic | 65.0% | |
| CGTCTTGGGACGCCGTGACA+TGG | + | chr4.1:76919819-76919838 | None:intergenic | 65.0% | |
| GCGAGGATGCCGAGGGTTTC+GGG | + | chr4.1:76919851-76919870 | None:intergenic | 65.0% | |
| GCGTCCTCTCCAACTGTCGC+GGG | + | chr4.1:76920877-76920896 | None:intergenic | 65.0% | |
| GGCATCCTCGCCTTTGACGC+CGG | - | chr4.1:76919860-76919879 | MS.gene073527:CDS | 65.0% | |
| GGCGAGGATGCCGAGGGTTT+CGG | + | chr4.1:76919852-76919871 | None:intergenic | 65.0% | |
| TCGGGCTCCGGCATCGTCTT+GGG | + | chr4.1:76919833-76919852 | None:intergenic | 65.0% | |
| TGACACGGTCCGGTGGCATG+GGG | - | chr4.1:76921068-76921087 | MS.gene073527:CDS | 65.0% | |
| TGGCACATGACACGGTCCGG+TGG | - | chr4.1:76921061-76921080 | MS.gene073527:CDS | 65.0% | |
| TTCGGGCTCCGGCATCGTCT+TGG | + | chr4.1:76919834-76919853 | None:intergenic | 65.0% | |
| ! | GTCGAGCTCCTCGAGGCGTT+CGG | + | chr4.1:76920029-76920048 | None:intergenic | 65.0% |
| !! | AGGACATGACGGGCACTCGC+TGG | - | chr4.1:76920987-76921006 | MS.gene073527:CDS | 65.0% |
| !! | CGGTGTTGTCGAGCTCCTCG+AGG | + | chr4.1:76920036-76920055 | None:intergenic | 65.0% |
| CGGTCCGGTGGCATGGGGAA+AGG | - | chr4.1:76921073-76921092 | MS.gene073527:CDS | 70.0% | |
| CTCGCTGGCCGAAGGATGGC+GGG | - | chr4.1:76921002-76921021 | MS.gene073527:CDS | 70.0% | |
| GGCACTCGCTGGCCGAAGGA+TGG | - | chr4.1:76920998-76921017 | MS.gene073527:CDS | 70.0% | |
| ! | CTCCTCGAGGCGTTCGGCAG+CGG | + | chr4.1:76920023-76920042 | None:intergenic | 70.0% |
| !! | AGGATGGCGGGAGGCAGTGG+AGG | - | chr4.1:76921014-76921033 | MS.gene073527:CDS | 70.0% |
| !! | CGAAGGATGGCGGGAGGCAG+TGG | - | chr4.1:76921011-76921030 | MS.gene073527:CDS | 70.0% |
| CGCGCCCGCGACAGTTGGAG+AGG | - | chr4.1:76920870-76920889 | MS.gene073527:CDS | 75.0% | |
| CTCCAACTGTCGCGGGCGCG+TGG | + | chr4.1:76920870-76920889 | None:intergenic | 75.0% | |
| CTCCACGCGCCCGCGACAGT+TGG | - | chr4.1:76920865-76920884 | MS.gene073527:CDS | 75.0% | |
| GACGGGCACTCGCTGGCCGA+AGG | - | chr4.1:76920994-76921013 | MS.gene073527:CDS | 75.0% | |
| GTTCGGCAGCGGCGAGGGTG+AGG | + | chr4.1:76920012-76920031 | None:intergenic | 75.0% | |
| ! | GAGGCGTTCGGCAGCGGCGA+GGG | + | chr4.1:76920017-76920036 | None:intergenic | 75.0% |
| !! | GCTGGCCGAAGGATGGCGGG+AGG | - | chr4.1:76921005-76921024 | MS.gene073527:CDS | 75.0% |
| ! | CGCCGCTGCCGAACGCCTCG+AGG | - | chr4.1:76920018-76920037 | MS.gene073527:CDS | 80.0% |
| ! | CGGCAGCGGCGAGGGTGAGG+AGG | + | chr4.1:76920009-76920028 | None:intergenic | 80.0% |
| !! | CGAGGCGTTCGGCAGCGGCG+AGG | + | chr4.1:76920018-76920037 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 76919803 | 76921242 | 76919803 | ID=MS.gene073527 |
| chr4.1 | mRNA | 76919803 | 76921242 | 76919803 | ID=MS.gene073527.t1;Parent=MS.gene073527 |
| chr4.1 | exon | 76919803 | 76921242 | 76919803 | ID=MS.gene073527.t1.exon1;Parent=MS.gene073527.t1 |
| chr4.1 | CDS | 76919803 | 76921242 | 76919803 | ID=cds.MS.gene073527.t1;Parent=MS.gene073527.t1 |
| Gene Sequence |
| Protein sequence |
