Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05015.t1 | RHN68080.1 | 98.6 | 508 | 7 | 0 | 1 | 508 | 1 | 508 | 5.00E-294 | 1019.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05015.t1 | Q42521 | 84.3 | 510 | 70 | 4 | 1 | 508 | 1 | 502 | 8.4e-250 | 864.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05015.t1 | A0A396IRV4 | 98.6 | 508 | 7 | 0 | 1 | 508 | 1 | 508 | 3.6e-294 | 1019.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049710 | MS.gene05015 | 0.853573 | 2.19E-61 | -1.69E-46 |
| MS.gene05015 | MS.gene051044 | 0.812756 | 3.61E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene053561 | 0.80788 | 4.07E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene054056 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene055942 | 0.865827 | 4.45E-65 | -1.69E-46 |
| MS.gene05015 | MS.gene057549 | 0.813513 | 2.46E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene058347 | 0.829434 | 5.16E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene058349 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene05015 | MS.gene058628 | 0.821253 | 4.46E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene058629 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene058630 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene059690 | 0.829411 | 5.23E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene059691 | 0.806247 | 9.03E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene059694 | 0.830053 | 3.65E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene059697 | 0.828552 | 8.44E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene061565 | 0.882051 | 1.44E-70 | -1.69E-46 |
| MS.gene05015 | MS.gene062065 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene062071 | 0.828725 | 7.66E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene064019 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene064093 | 0.824356 | 8.44E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene065380 | 0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene066532 | 0.81776 | 2.79E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene066628 | 0.812831 | 3.48E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene071810 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene072378 | 0.818137 | 2.29E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene073175 | 0.823746 | 1.17E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene073527 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene20093 | 0.812778 | 3.57E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene21577 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene24883 | 0.816326 | 5.86E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene25062 | 0.825624 | 4.24E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene26403 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene26489 | 0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene27550 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene27711 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene27779 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene28110 | 0.81124 | 7.73E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene28111 | 0.837608 | 4.70E-57 | -1.69E-46 |
| MS.gene05015 | MS.gene28724 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene35105 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene36266 | 0.820085 | 8.26E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene36437 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene36438 | 0.817062 | 4.01E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene38359 | 0.824897 | 6.29E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene38706 | 0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene39054 | 0.826367 | 2.82E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene39534 | 0.867082 | 1.78E-65 | -1.69E-46 |
| MS.gene05015 | MS.gene39535 | 0.831401 | 1.70E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene40247 | 0.823003 | 1.75E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene40620 | 0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene40699 | 0.822198 | 2.69E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene45155 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene46441 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene47576 | 0.831847 | 1.32E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene47930 | 0.802527 | 5.38E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene50312 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene51018 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene51024 | 0.81081 | 9.58E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene51514 | 0.849046 | 4.16E-60 | -1.69E-46 |
| MS.gene05015 | MS.gene51528 | 0.855299 | 6.93E-62 | -1.69E-46 |
| MS.gene05015 | MS.gene52226 | 0.821509 | 3.89E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene52724 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene53498 | 0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene54952 | 0.810067 | 1.39E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene55036 | 0.834106 | 3.63E-56 | -1.69E-46 |
| MS.gene05015 | MS.gene56769 | 0.829478 | 5.03E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene57987 | 0.844743 | 6.26E-59 | -1.69E-46 |
| MS.gene05015 | MS.gene58223 | 0.837177 | 6.06E-57 | -1.69E-46 |
| MS.gene05015 | MS.gene60721 | 0.81108 | 8.37E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene60722 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene63511 | 0.83518 | 1.95E-56 | -1.69E-46 |
| MS.gene05015 | MS.gene64855 | 0.818272 | 2.14E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene67744 | 0.830893 | 2.27E-55 | -1.69E-46 |
| MS.gene05015 | MS.gene68062 | 0.800066 | 1.72E-48 | -1.69E-46 |
| MS.gene05015 | MS.gene68355 | 0.815153 | 1.07E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene69852 | 0.806062 | 9.87E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene73753 | 0.850224 | 1.95E-60 | -1.69E-46 |
| MS.gene05015 | MS.gene75508 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene76310 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene76453 | 0.841769 | 3.89E-58 | -1.69E-46 |
| MS.gene05015 | MS.gene77512 | 0.802284 | 6.04E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene78327 | 0.819843 | 9.38E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene79094 | 0.803985 | 2.68E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene79201 | 0.802534 | 5.36E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene84704 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene05015 | MS.gene88886 | 0.816105 | 6.57E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene88887 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene88888 | 0.804467 | 2.13E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene89082 | 0.825609 | 4.27E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene90201 | 0.811054 | 8.48E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene92255 | 0.822778 | 1.97E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene92589 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene92808 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene05015 | MS.gene95929 | 0.811301 | 7.50E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene97069 | 0.821511 | 3.88E-53 | -1.69E-46 |
| MS.gene05015 | MS.gene97601 | 0.818313 | 2.09E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene99191 | 0.815174 | 1.06E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene99455 | 0.826014 | 3.42E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05015.t1 | MTR_3g064740 | 98.228 | 508 | 9 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1037 |
| MS.gene05015.t1 | MTR_5g077090 | 83.968 | 499 | 74 | 3 | 11 | 508 | 2 | 495 | 0.0 | 874 |
| MS.gene05015.t1 | MTR_3g064740 | 97.821 | 413 | 9 | 0 | 96 | 508 | 1 | 413 | 0.0 | 841 |
| MS.gene05015.t1 | MTR_6g075210 | 76.258 | 497 | 109 | 2 | 1 | 494 | 1 | 491 | 0.0 | 786 |
| MS.gene05015.t1 | MTR_6g075210 | 72.751 | 378 | 91 | 2 | 131 | 508 | 1 | 366 | 0.0 | 567 |
| MS.gene05015.t1 | MTR_6g075210 | 70.227 | 309 | 86 | 1 | 190 | 498 | 1 | 303 | 8.27e-158 | 451 |
| MS.gene05015.t1 | MTR_7g022310 | 25.275 | 364 | 240 | 12 | 81 | 433 | 157 | 499 | 1.47e-23 | 104 |
| MS.gene05015.t1 | MTR_5g075840 | 46.914 | 81 | 43 | 0 | 372 | 452 | 48 | 128 | 3.39e-16 | 76.3 |
| MS.gene05015.t1 | MTR_5g075820 | 62.069 | 58 | 19 | 1 | 252 | 309 | 15 | 69 | 3.82e-15 | 73.2 |
| MS.gene05015.t1 | MTR_3g064750 | 79.545 | 44 | 9 | 0 | 464 | 507 | 5 | 48 | 1.24e-14 | 73.2 |
| MS.gene05015.t1 | MTR_3g064750 | 79.545 | 44 | 9 | 0 | 464 | 507 | 5 | 48 | 8.77e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05015.t1 | AT5G17330 | 84.314 | 510 | 70 | 4 | 1 | 508 | 1 | 502 | 0.0 | 884 |
| MS.gene05015.t1 | AT2G02010 | 81.102 | 508 | 81 | 4 | 1 | 508 | 53 | 545 | 0.0 | 857 |
| MS.gene05015.t1 | AT2G02010 | 81.102 | 508 | 81 | 4 | 1 | 508 | 1 | 493 | 0.0 | 857 |
| MS.gene05015.t1 | AT1G65960 | 80.906 | 508 | 83 | 4 | 1 | 508 | 1 | 494 | 0.0 | 847 |
| MS.gene05015.t1 | AT2G02000 | 80.040 | 496 | 83 | 3 | 1 | 494 | 1 | 482 | 0.0 | 834 |
| MS.gene05015.t1 | AT3G17760 | 74.400 | 500 | 120 | 3 | 1 | 500 | 1 | 492 | 0.0 | 782 |
| MS.gene05015.t1 | AT3G17760 | 74.400 | 500 | 120 | 3 | 1 | 500 | 1 | 492 | 0.0 | 782 |
| MS.gene05015.t1 | AT1G65960 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| MS.gene05015.t1 | AT1G65960 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| MS.gene05015.t1 | AT1G65960 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| MS.gene05015.t1 | AT3G17720 | 74.074 | 162 | 39 | 1 | 91 | 252 | 27 | 185 | 6.10e-81 | 250 |
| MS.gene05015.t1 | AT1G27980 | 24.444 | 360 | 244 | 11 | 81 | 431 | 160 | 500 | 1.78e-19 | 92.0 |
Find 117 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTCATCGTTTATTATT+TGG | 0.136280 | 3.4:-66396744 | None:intergenic |
| CTGGAATTGGTTGGGCTATT+TGG | 0.152853 | 3.4:+66400623 | MS.gene05015:CDS |
| GTCAACGTAGTTCTTGTTAA+TGG | 0.200680 | 3.4:-66396851 | None:intergenic |
| TGGAAACCCTAGATTGAATT+TGG | 0.204949 | 3.4:+66396774 | MS.gene05015:CDS |
| ATCCTTGGTTCAACGCTAAA+TGG | 0.251746 | 3.4:+66400299 | MS.gene05015:CDS |
| TCGAGTTCTGGATAAATAAA+TGG | 0.285822 | 3.4:-66400532 | None:intergenic |
| CGGAAATCCCACTCGAGTTC+TGG | 0.298635 | 3.4:-66400544 | None:intergenic |
| GTTGAAAAGAATAAGGAAAC+TGG | 0.312144 | 3.4:+66400359 | MS.gene05015:CDS |
| TCTCCTTGTTGAAAAGAATA+AGG | 0.326676 | 3.4:+66400352 | MS.gene05015:CDS |
| ATTTGGTATGCTGCATCCTT+TGG | 0.329291 | 3.4:-66396727 | None:intergenic |
| GCAGTTGGTGTTGGCACTGT+TGG | 0.345197 | 3.4:+66399940 | MS.gene05015:CDS |
| AACGATGAATTGATGCTTGA+TGG | 0.349990 | 3.4:+66396754 | MS.gene05015:CDS |
| AAGGATGCCAAATTCAATCT+AGG | 0.353730 | 3.4:-66396781 | None:intergenic |
| AGAGAGAAATTACTGCGATT+TGG | 0.357715 | 3.4:+66401689 | MS.gene05015:CDS |
| ATCTGTGTTGCTGCTATCCT+TGG | 0.374389 | 3.4:+66400284 | MS.gene05015:CDS |
| TCCGACTTGTTGAGGCGCTT+CGG | 0.376346 | 3.4:+66401415 | MS.gene05015:CDS |
| ATGTGAAAGATGAGTTCTTC+AGG | 0.381067 | 3.4:-66400664 | None:intergenic |
| CCCTCAAAAGGCTGTGGAAT+TGG | 0.393571 | 3.4:+66400247 | MS.gene05015:CDS |
| GGCTATAATGTTAGCTGGAT+TGG | 0.399926 | 3.4:+66399972 | MS.gene05015:CDS |
| ACAATGTTGGGTTTGTCATA+AGG | 0.411349 | 3.4:-66400039 | None:intergenic |
| ACCTGGAGCTCAGTGGTGAC+AGG | 0.420581 | 3.4:-66396886 | None:intergenic |
| CTAGCTGCATCCACATGAAT+AGG | 0.423113 | 3.4:-66400493 | None:intergenic |
| CCTAATGACAACGCGTAAAA+CGG | 0.423881 | 3.4:-66401485 | None:intergenic |
| TTCAACTTGTGAAGGTTTGT+TGG | 0.425044 | 3.4:+66400153 | MS.gene05015:intron |
| TTGTCTATGCTGGAATTGGT+TGG | 0.426198 | 3.4:+66400614 | MS.gene05015:CDS |
| TTGGCTCCAGTGACAATGTT+GGG | 0.432381 | 3.4:-66400051 | None:intergenic |
| TGTCTATGCTGGAATTGGTT+GGG | 0.432578 | 3.4:+66400615 | MS.gene05015:CDS |
| CCCTGTCACCACTGAGCTCC+AGG | 0.434157 | 3.4:+66396885 | MS.gene05015:CDS |
| GAAAGACGACGGTGTACCTT+TGG | 0.434840 | 3.4:+66401345 | MS.gene05015:CDS |
| ACGGTTATGTGTTGAGCATC+CGG | 0.438825 | 3.4:-66401466 | None:intergenic |
| GGTCTTGTCTATGCTGGAAT+TGG | 0.440515 | 3.4:+66400610 | MS.gene05015:CDS |
| TCAACTTGTGAAGGTTTGTT+GGG | 0.440857 | 3.4:+66400154 | MS.gene05015:intron |
| ACTAATACGTCTTGGTTATG+AGG | 0.453134 | 3.4:+66401108 | MS.gene05015:CDS |
| TTTGGTGGCCTTCACATTGA+AGG | 0.458482 | 3.4:+66401363 | MS.gene05015:CDS |
| CTTTGAAGTGGAATTGAAAG+AGG | 0.469636 | 3.4:+66400193 | MS.gene05015:CDS |
| CTATGTAATGGACCCTCAAA+AGG | 0.479714 | 3.4:+66400235 | MS.gene05015:CDS |
| TAGCTGGATTGGCATTCAAA+AGG | 0.488770 | 3.4:+66399983 | MS.gene05015:CDS |
| AATGTTAGTGGTCACAAATA+CGG | 0.489182 | 3.4:+66400589 | MS.gene05015:CDS |
| TCCGGTGGCATGCTGTATGC+TGG | 0.489283 | 3.4:-66401448 | None:intergenic |
| GGAAGAAGTTTGTGATGGAT+AGG | 0.490629 | 3.4:+66401710 | MS.gene05015:CDS |
| ATCTTTCACATCAACTATCT+AGG | 0.491229 | 3.4:+66400676 | MS.gene05015:CDS |
| ATGTCAGAACTTCACTTCCT+AGG | 0.491432 | 3.4:+66396357 | MS.gene05015:CDS |
| GTGGGATTTCCGCTTACCAT+TGG | 0.491732 | 3.4:+66400555 | MS.gene05015:CDS |
| GTGAAGAGTATCAATGTTAG+TGG | 0.498190 | 3.4:+66400577 | MS.gene05015:CDS |
| GTTACCTTTGGAGAAGTTGA+GGG | 0.499919 | 3.4:-66400719 | None:intergenic |
| GAGAAGTTGAGGGTAAAGGT+AGG | 0.503154 | 3.4:-66400709 | None:intergenic |
| ACTTGTTGAGGCGCTTCGGA+TGG | 0.503654 | 3.4:+66401419 | MS.gene05015:CDS |
| AAATACGGTCTTGTCTATGC+TGG | 0.504103 | 3.4:+66400604 | MS.gene05015:CDS |
| TCCTTTGGTATAGACTCATC+TGG | 0.507663 | 3.4:-66396712 | None:intergenic |
| TCAGAGGCTATAATGTTAGC+TGG | 0.510971 | 3.4:+66399967 | MS.gene05015:CDS |
| AGGATGCCAAATTCAATCTA+GGG | 0.511690 | 3.4:-66396780 | None:intergenic |
| CATAACCAAGACGTATTAGT+TGG | 0.512214 | 3.4:-66401105 | None:intergenic |
| CAACATGATAGTACTAAAAG+AGG | 0.514647 | 3.4:+66401288 | MS.gene05015:CDS |
| TTCAAATCTCCGACTTGTTG+AGG | 0.514940 | 3.4:+66401407 | MS.gene05015:CDS |
| TTTGGAGAAGTTGAGGGTAA+AGG | 0.515641 | 3.4:-66400713 | None:intergenic |
| TGTTACCTTTGGAGAAGTTG+AGG | 0.521918 | 3.4:-66400720 | None:intergenic |
| GGTAGTATTGAGCAATGACT+TGG | 0.536048 | 3.4:-66401084 | None:intergenic |
| GACAAACCCAACATTGTCAC+TGG | 0.537693 | 3.4:+66400045 | MS.gene05015:CDS |
| TACTACCAACTAATACGTCT+TGG | 0.539700 | 3.4:+66401100 | MS.gene05015:CDS |
| TGCACCACTTAAAGAAAATG+AGG | 0.543644 | 3.4:+66399915 | MS.gene05015:CDS |
| AGACGACGGTGTACCTTTGG+TGG | 0.544514 | 3.4:+66401348 | MS.gene05015:CDS |
| TCAAAAGGCTGTGGAATTGG+TGG | 0.546678 | 3.4:+66400250 | MS.gene05015:CDS |
| GAAATTCATCAAAGTTTGTG+TGG | 0.556299 | 3.4:-66401387 | None:intergenic |
| AAAGAGGTTAAGCTAAGTGA+AGG | 0.559738 | 3.4:+66400209 | MS.gene05015:CDS |
| CCTGGAGCTCAGTGGTGACA+GGG | 0.560861 | 3.4:-66396885 | None:intergenic |
| ATTCGCAAGATACTTTGAAG+TGG | 0.561414 | 3.4:+66400181 | MS.gene05015:CDS |
| ATATATATGTACCTGGACAT+TGG | 0.564641 | 3.4:-66400070 | None:intergenic |
| AAGTGAAGGATACTATGTAA+TGG | 0.565226 | 3.4:+66400223 | MS.gene05015:CDS |
| GATTGGCATTCAAAAGGAAG+TGG | 0.569504 | 3.4:+66399989 | MS.gene05015:CDS |
| AAAGAAAATGAGGCTGCAGT+TGG | 0.571389 | 3.4:+66399925 | MS.gene05015:CDS |
| TGTCACTGGAGCCAATGTCC+AGG | 0.573804 | 3.4:+66400059 | MS.gene05015:CDS |
| TATTTATCCAGAACTCGAGT+GGG | 0.578175 | 3.4:+66400537 | MS.gene05015:CDS |
| TGAGTGTGATAAACTCATCA+TGG | 0.579495 | 3.4:+66396825 | MS.gene05015:CDS |
| AGCGAGAAGCAAAGGTTGAG+TGG | 0.584467 | 3.4:-66396334 | None:intergenic |
| CATGAAGTTGTGAAAGACAA+TGG | 0.584886 | 3.4:+66401628 | MS.gene05015:CDS |
| AGAAGCAAAGGTTGAGTGGA+CGG | 0.585475 | 3.4:-66396330 | None:intergenic |
| TTTACCCTCAACTTCTCCAA+AGG | 0.585575 | 3.4:+66400715 | MS.gene05015:CDS |
| ATTGGCTCCAGTGACAATGT+TGG | 0.587848 | 3.4:-66400052 | None:intergenic |
| TCCAGCATACAGCATGCCAC+CGG | 0.588279 | 3.4:+66401447 | MS.gene05015:CDS |
| AATGGACCCTCAAAAGGCTG+TGG | 0.588314 | 3.4:+66400241 | MS.gene05015:CDS |
| GCGAGGATAAAGATGATAAG+TGG | 0.592545 | 3.4:+66401586 | MS.gene05015:CDS |
| TGGCACTGTTGGCTCATCAG+AGG | 0.595925 | 3.4:+66399951 | MS.gene05015:CDS |
| CTCCATCCATGTTGTCACAA+AGG | 0.596122 | 3.4:-66396800 | None:intergenic |
| AATGAGGCTGCAGTTGGTGT+TGG | 0.597938 | 3.4:+66399931 | MS.gene05015:CDS |
| AAGTTGAATGATAAGATGAA+TGG | 0.598555 | 3.4:+66401736 | MS.gene05015:CDS |
| CATGTGGATGCAGCTAGTGG+TGG | 0.599570 | 3.4:+66400499 | MS.gene05015:CDS |
| TTATTTATCCAGAACTCGAG+TGG | 0.603826 | 3.4:+66400536 | MS.gene05015:CDS |
| TTGGGCTATTTGGAGAAGCA+AGG | 0.608130 | 3.4:+66400633 | MS.gene05015:CDS |
| TCATTAGGGAGGATTTCTCA+AGG | 0.609229 | 3.4:+66401500 | MS.gene05015:CDS |
| CTCCATTTAGCGTTGAACCA+AGG | 0.610227 | 3.4:-66400301 | None:intergenic |
| GCCAGATGAGTCTATACCAA+AGG | 0.611743 | 3.4:+66396711 | MS.gene05015:CDS |
| TTTACGCGTTGTCATTAGGG+AGG | 0.614957 | 3.4:+66401489 | MS.gene05015:CDS |
| TTCAATGTGAAGGCCACCAA+AGG | 0.619278 | 3.4:-66401361 | None:intergenic |
| TACTCTTCACCAATGGTAAG+CGG | 0.619728 | 3.4:-66400564 | None:intergenic |
| TAACAAGAACTACGTTGACA+TGG | 0.621311 | 3.4:+66396855 | MS.gene05015:CDS |
| TTGAAAAGAATAAGGAAACT+GGG | 0.621388 | 3.4:+66400360 | MS.gene05015:CDS |
| TGGCATCCTTTGTGACAACA+TGG | 0.623914 | 3.4:+66396794 | MS.gene05015:CDS |
| AACATGATAGTACTAAAAGA+GGG | 0.624331 | 3.4:+66401289 | MS.gene05015:CDS |
| ATGGGACACTCCTATTCATG+TGG | 0.625531 | 3.4:+66400483 | MS.gene05015:CDS |
| ATTCATGTGGATGCAGCTAG+TGG | 0.626108 | 3.4:+66400496 | MS.gene05015:CDS |
| TCTGACATAGCGAGAAGCAA+AGG | 0.626124 | 3.4:-66396342 | None:intergenic |
| TCCGAAGCGCCTCAACAAGT+CGG | 0.626271 | 3.4:-66401416 | None:intergenic |
| CAGAACAAAAGAAAACAAGA+AGG | 0.631442 | 3.4:+66400012 | MS.gene05015:CDS |
| ATGATGAGTTTATCACACTC+AGG | 0.633349 | 3.4:-66396823 | None:intergenic |
| ATCCTTTGTGACAACATGGA+TGG | 0.634293 | 3.4:+66396798 | MS.gene05015:CDS |
| TGTGTGGTCCTTCAATGTGA+AGG | 0.636795 | 3.4:-66401371 | None:intergenic |
| AAGGATAGCAGCAACACAGA+TGG | 0.642966 | 3.4:-66400282 | None:intergenic |
| ACATTGATACTCTTCACCAA+TGG | 0.659392 | 3.4:-66400571 | None:intergenic |
| GATTTGGAAGAAGTTTGTGA+TGG | 0.665700 | 3.4:+66401705 | MS.gene05015:CDS |
| GTGGACGGAAACATCAGACT+CGG | 0.670695 | 3.4:-66396315 | None:intergenic |
| AACATTGTGTCGAAAGACGA+CGG | 0.682392 | 3.4:+66401334 | MS.gene05015:CDS |
| AAGGTCTACCTGGAGCTCAG+TGG | 0.684607 | 3.4:-66396893 | None:intergenic |
| AGCTTGATTCACTTACTGCG+AGG | 0.692666 | 3.4:+66401569 | MS.gene05015:CDS |
| GAAAGACAATGGTCAAGTAG+TGG | 0.695297 | 3.4:+66401639 | MS.gene05015:CDS |
| GACGGAAACATCAGACTCGG+AGG | 0.705679 | 3.4:-66396312 | None:intergenic |
| GTTATGTGTTGAGCATCCGG+TGG | 0.707543 | 3.4:-66401463 | None:intergenic |
| CTTTCTCTATATCAGCTACG+AGG | 0.765112 | 3.4:-66401537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr3.4:66398181-66398200 | MS.gene05015:intron | 0.0% |
| !! | TAAATAAATATAAATATATA+TGG | - | chr3.4:66397889-66397908 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAGTAAGTAAA+AGG | - | chr3.4:66396931-66396950 | None:intergenic | 10.0% |
| !! | AAAATAAAAAATATTTATCG+GGG | + | chr3.4:66399365-66399384 | MS.gene05015:intron | 10.0% |
| !! | AAAATTAATAAATTACTCAA+TGG | - | chr3.4:66397272-66397291 | None:intergenic | 10.0% |
| !! | AATAAAATATATATAGAGAA+AGG | - | chr3.4:66398549-66398568 | None:intergenic | 10.0% |
| !! | AATATCATAAAATTAATTAG+AGG | + | chr3.4:66398143-66398162 | MS.gene05015:intron | 10.0% |
| !! | ATAAAATATATATAGAGAAA+GGG | - | chr3.4:66398548-66398567 | None:intergenic | 10.0% |
| !! | ATATCATAAAATTAATTAGA+GGG | + | chr3.4:66398144-66398163 | MS.gene05015:intron | 10.0% |
| !! | ATTTAATATATAACAATGAA+TGG | - | chr3.4:66398357-66398376 | None:intergenic | 10.0% |
| !! | CAAAATAAAAAATATTTATC+GGG | + | chr3.4:66399364-66399383 | MS.gene05015:intron | 10.0% |
| !! | CAATAAATAATTAATAGTTA+AGG | - | chr3.4:66397311-66397330 | None:intergenic | 10.0% |
| !! | GATATACATAATATTAATTA+AGG | + | chr3.4:66399391-66399410 | MS.gene05015:intron | 10.0% |
| !! | TAATTGGAAAATTAAATATA+GGG | - | chr3.4:66397692-66397711 | None:intergenic | 10.0% |
| !! | TTAATTGGAAAATTAAATAT+AGG | - | chr3.4:66397693-66397712 | None:intergenic | 10.0% |
| !!! | AACAATTTTTTAAAAAATTG+GGG | - | chr3.4:66397248-66397267 | None:intergenic | 10.0% |
| !!! | AACTTAAATTTTTTAATGTT+GGG | - | chr3.4:66398754-66398773 | None:intergenic | 10.0% |
| !!! | ATTTATTAATTTTTGTTTTG+TGG | + | chr3.4:66397279-66397298 | MS.gene05015:intron | 10.0% |
| !!! | GAAACAATTTTTTAAAAAAT+TGG | - | chr3.4:66397250-66397269 | None:intergenic | 10.0% |
| !!! | TTGATCATTTTATTTTTAAA+CGG | + | chr3.4:66396393-66396412 | MS.gene05015:intron | 10.0% |
| !!! | TTTTGTTTTGAAAATATTTT+AGG | + | chr3.4:66398488-66398507 | MS.gene05015:intron | 10.0% |
| !! | AAAATAAAAAGAAGACATTA+TGG | - | chr3.4:66400419-66400438 | None:intergenic | 15.0% |
| !! | AATAAAAGAGAAGATATAAT+TGG | + | chr3.4:66397919-66397938 | MS.gene05015:intron | 15.0% |
| !! | AGCAATTTATATAACATTAA+AGG | + | chr3.4:66399435-66399454 | MS.gene05015:intron | 15.0% |
| !! | ATAAAAGAGAAGATATAATT+GGG | + | chr3.4:66397920-66397939 | MS.gene05015:intron | 15.0% |
| !! | ATCTTTAATGAAGATTAATT+AGG | - | chr3.4:66399216-66399235 | None:intergenic | 15.0% |
| !! | CAAAAACTTAAAAATATTAG+TGG | + | chr3.4:66397639-66397658 | MS.gene05015:intron | 15.0% |
| !! | CTAAAATTGAAAAATACAAA+AGG | - | chr3.4:66397962-66397981 | None:intergenic | 15.0% |
| !! | TAACTTATAAAACAAAGAAA+AGG | - | chr3.4:66397750-66397769 | None:intergenic | 15.0% |
| !! | TATTAATTATTTATTGCACA+TGG | + | chr3.4:66397315-66397334 | MS.gene05015:intron | 15.0% |
| !! | TTTAATATATGCATCAATTA+AGG | - | chr3.4:66397179-66397198 | None:intergenic | 15.0% |
| !!! | ACTTAAATTTTTTAATGTTG+GGG | - | chr3.4:66398753-66398772 | None:intergenic | 15.0% |
| !!! | ATCCTTTATTTTTTTTTTGA+GGG | + | chr3.4:66396975-66396994 | MS.gene05015:intron | 15.0% |
| !!! | CAACTTAAATTTTTTAATGT+TGG | - | chr3.4:66398755-66398774 | None:intergenic | 15.0% |
| !!! | CACTAATATTTTTAAGTTTT+TGG | - | chr3.4:66397641-66397660 | None:intergenic | 15.0% |
| !!! | CTAAATATTTGTTATAAAGA+TGG | - | chr3.4:66398073-66398092 | None:intergenic | 15.0% |
| !!! | CTTCTTTTTATTTTACATTT+TGG | + | chr3.4:66400425-66400444 | MS.gene05015:intron | 15.0% |
| !!! | CTTTTGTATTTTTCAATTTT+AGG | + | chr3.4:66397960-66397979 | MS.gene05015:intron | 15.0% |
| !!! | TAATATTTTTAAGTTTTTGG+TGG | - | chr3.4:66397638-66397657 | None:intergenic | 15.0% |
| !!! | TTTTCTTTGTTTTATAAGTT+AGG | + | chr3.4:66397749-66397768 | MS.gene05015:intron | 15.0% |
| !! | AAAAATAGATGTATAGGTAA+AGG | + | chr3.4:66398882-66398901 | MS.gene05015:intron | 20.0% |
| !! | AAAATGACAACTAAAAAAGA+AGG | + | chr3.4:66397489-66397508 | MS.gene05015:intron | 20.0% |
| !! | AATGCAAATTTATGGATTTA+AGG | - | chr3.4:66396537-66396556 | None:intergenic | 20.0% |
| !! | AATGCATAATAATATATGCA+AGG | + | chr3.4:66397562-66397581 | MS.gene05015:intron | 20.0% |
| !! | AGTTATGATAAGTATGTAAA+AGG | - | chr3.4:66401157-66401176 | None:intergenic | 20.0% |
| !! | ATCCCTCAAAAAAAAAATAA+AGG | - | chr3.4:66396980-66396999 | None:intergenic | 20.0% |
| !! | CAAAATATAAAGTTGAAATG+TGG | + | chr3.4:66400901-66400920 | MS.gene05015:intron | 20.0% |
| !! | CAAACAAAAAATAGATGTAT+AGG | + | chr3.4:66398876-66398895 | MS.gene05015:intron | 20.0% |
| !! | CATTTCAATGACAAAAATTA+TGG | + | chr3.4:66399779-66399798 | MS.gene05015:intron | 20.0% |
| !! | GTCATTTGTAATATTATAGT+TGG | + | chr3.4:66399035-66399054 | MS.gene05015:intron | 20.0% |
| !! | GTTATGATAAGTATGTAAAA+GGG | - | chr3.4:66401156-66401175 | None:intergenic | 20.0% |
| !! | TAGTATTAAGAAACATATCA+TGG | + | chr3.4:66397019-66397038 | MS.gene05015:intron | 20.0% |
| !! | TATAATATGACAATGACTTA+CGG | - | chr3.4:66399261-66399280 | None:intergenic | 20.0% |
| !! | TCAATTCATCGTTTATTATT+TGG | - | chr3.4:66396747-66396766 | None:intergenic | 20.0% |
| !! | TTATGATAAGTATGTAAAAG+GGG | - | chr3.4:66401155-66401174 | None:intergenic | 20.0% |
| !!! | AAATATTTTAGGTAGAATTG+TGG | + | chr3.4:66398499-66398518 | MS.gene05015:intron | 20.0% |
| !!! | AAATCATATTTTGAGAATCA+AGG | + | chr3.4:66396628-66396647 | MS.gene05015:intron | 20.0% |
| !!! | AAATTTCTTTTTATTGGATG+AGG | + | chr3.4:66399745-66399764 | MS.gene05015:intron | 20.0% |
| !!! | AACTACTTATCTTCTTTTTT+TGG | - | chr3.4:66397394-66397413 | None:intergenic | 20.0% |
| !!! | AATATTTTAGGTAGAATTGT+GGG | + | chr3.4:66398500-66398519 | MS.gene05015:intron | 20.0% |
| !!! | AGATACTTAGAAGTATTATT+AGG | - | chr3.4:66398411-66398430 | None:intergenic | 20.0% |
| !!! | AGTATTTTTTTAATTGGTCA+TGG | - | chr3.4:66399810-66399829 | None:intergenic | 20.0% |
| !!! | ATGAAATTCTTTTTGTAGAT+GGG | + | chr3.4:66400465-66400484 | MS.gene05015:intron | 20.0% |
| !!! | CAACTTTAACTGTTTTTTTT+TGG | - | chr3.4:66398811-66398830 | None:intergenic | 20.0% |
| !!! | CATAATTTTTGTCATTGAAA+TGG | - | chr3.4:66399781-66399800 | None:intergenic | 20.0% |
| !!! | CTTAAATTTTTTAATGTTGG+GGG | - | chr3.4:66398752-66398771 | None:intergenic | 20.0% |
| !!! | GAATTTTCGTTTATTTGTTA+TGG | - | chr3.4:66399707-66399726 | None:intergenic | 20.0% |
| !!! | GATACATACTCATTTTAATT+AGG | - | chr3.4:66399683-66399702 | None:intergenic | 20.0% |
| !!! | GATACTTAGAAGTATTATTA+GGG | - | chr3.4:66398410-66398429 | None:intergenic | 20.0% |
| !!! | GATCCTTTATTTTTTTTTTG+AGG | + | chr3.4:66396974-66396993 | MS.gene05015:intron | 20.0% |
| !!! | TATGAAATTCTTTTTGTAGA+TGG | + | chr3.4:66400464-66400483 | MS.gene05015:intron | 20.0% |
| !!! | TATTTAAACATTTCTTTTCC+TGG | + | chr3.4:66397107-66397126 | MS.gene05015:intron | 20.0% |
| !!! | TCTTTTTTAGTTGTCATTTT+CGG | - | chr3.4:66397489-66397508 | None:intergenic | 20.0% |
| !!! | TTTTCAAAACAAAAATCACT+AGG | - | chr3.4:66398482-66398501 | None:intergenic | 20.0% |
| ! | AAATATATATGGCACTTGTA+AGG | - | chr3.4:66397878-66397897 | None:intergenic | 25.0% |
| ! | AACATGATAGTACTAAAAGA+GGG | + | chr3.4:66401289-66401308 | MS.gene05015:CDS | 25.0% |
| ! | AAGTTGAATGATAAGATGAA+TGG | + | chr3.4:66401736-66401755 | MS.gene05015:CDS | 25.0% |
| ! | AATATATATGGCACTTGTAA+GGG | - | chr3.4:66397877-66397896 | None:intergenic | 25.0% |
| ! | ACAAGATCAATGCAAATTTA+TGG | - | chr3.4:66396545-66396564 | None:intergenic | 25.0% |
| ! | ACATGTTATATATATGTACC+TGG | - | chr3.4:66400080-66400099 | None:intergenic | 25.0% |
| ! | ACCAAAAACTTAAAAATACC+CGG | + | chr3.4:66397609-66397628 | MS.gene05015:intron | 25.0% |
| ! | AGCTATACATAATATATGCA+AGG | + | chr3.4:66397792-66397811 | MS.gene05015:intron | 25.0% |
| ! | AGTGTAAATGTTTGAATTTG+AGG | - | chr3.4:66398787-66398806 | None:intergenic | 25.0% |
| ! | ATAATATGACAATGACTTAC+GGG | - | chr3.4:66399260-66399279 | None:intergenic | 25.0% |
| ! | GAGAGGAAATTAGATTAATA+AGG | - | chr3.4:66397146-66397165 | None:intergenic | 25.0% |
| ! | GGATAAGAAATAAATGCAAA+AGG | - | chr3.4:66399195-66399214 | None:intergenic | 25.0% |
| ! | GTAAAATAACTATGGTATCT+AGG | + | chr3.4:66396605-66396624 | MS.gene05015:intron | 25.0% |
| ! | GTGTAAATGTTTGAATTTGA+GGG | - | chr3.4:66398786-66398805 | None:intergenic | 25.0% |
| ! | TACAAAAGGTCAAAATACAA+AGG | - | chr3.4:66397948-66397967 | None:intergenic | 25.0% |
| ! | TATATGGATATATGCAGAAT+CGG | + | chr3.4:66399863-66399882 | MS.gene05015:intron | 25.0% |
| ! | TTAAATGCGACAAATATCAT+GGG | + | chr3.4:66399488-66399507 | MS.gene05015:intron | 25.0% |
| ! | TTGAAAAGAATAAGGAAACT+GGG | + | chr3.4:66400360-66400379 | MS.gene05015:CDS | 25.0% |
| ! | TTTAAATGCGACAAATATCA+TGG | + | chr3.4:66399487-66399506 | MS.gene05015:intron | 25.0% |
| ! | TTTACAAAATTATGCAATGC+AGG | + | chr3.4:66401055-66401074 | MS.gene05015:intron | 25.0% |
| ! | TTTATACTTGAATAACACTC+CGG | + | chr3.4:66398919-66398938 | MS.gene05015:intron | 25.0% |
| !! | AGTGTTATTCAAGTATAAAC+TGG | - | chr3.4:66398918-66398937 | None:intergenic | 25.0% |
| !! | GTTTGCTAGTAAAATAACTA+TGG | + | chr3.4:66396597-66396616 | MS.gene05015:intron | 25.0% |
| !! | TAAGTAAAAGGTATGATGTA+GGG | - | chr3.4:66396919-66396938 | None:intergenic | 25.0% |
| !! | TTTCCTTATTCTTTTCAACA+AGG | - | chr3.4:66400358-66400377 | None:intergenic | 25.0% |
| !!! | ATAATTAACACCTCTAAGAT+TGG | - | chr3.4:66398840-66398859 | None:intergenic | 25.0% |
| !!! | ATTTCCTGACATATTTTTTG+TGG | - | chr3.4:66397840-66397859 | None:intergenic | 25.0% |
| !!! | GTAGTTTTATCAACATTCTT+TGG | + | chr3.4:66397408-66397427 | MS.gene05015:intron | 25.0% |
| !!! | TAGCTTTTGAAACTTGAATT+TGG | - | chr3.4:66400977-66400996 | None:intergenic | 25.0% |
| !!! | TATTTTACATTTTGGAGTTG+AGG | + | chr3.4:66400433-66400452 | MS.gene05015:intron | 25.0% |
| !!! | TATTTTTAAGTTTTTGGTGG+TGG | - | chr3.4:66397607-66397626 | None:intergenic | 25.0% |
| AAAAATTGGGGAGTAGTTAA+CGG | - | chr3.4:66397236-66397255 | None:intergenic | 30.0% | |
| AAATGTTTGAATTTGAGGGA+AGG | - | chr3.4:66398782-66398801 | None:intergenic | 30.0% | |
| AAGTGAAGGATACTATGTAA+TGG | + | chr3.4:66400223-66400242 | MS.gene05015:CDS | 30.0% | |
| AGTCATTGTCTAATGTAGTT+CGG | + | chr3.4:66399156-66399175 | MS.gene05015:intron | 30.0% | |
| ATATATATGTACCTGGACAT+TGG | - | chr3.4:66400073-66400092 | None:intergenic | 30.0% | |
| ATCTTTCACATCAACTATCT+AGG | + | chr3.4:66400676-66400695 | MS.gene05015:CDS | 30.0% | |
| CAACATGATAGTACTAAAAG+AGG | + | chr3.4:66401288-66401307 | MS.gene05015:CDS | 30.0% | |
| CAGAACAAAAGAAAACAAGA+AGG | + | chr3.4:66400012-66400031 | MS.gene05015:CDS | 30.0% | |
| CTACATTAGACAATGACTTA+CGG | - | chr3.4:66399154-66399173 | None:intergenic | 30.0% | |
| CTAGCTAATGAAAAGCAATA+AGG | - | chr3.4:66397204-66397223 | None:intergenic | 30.0% | |
| GAAAAGAAAATGGTGTAATC+AGG | - | chr3.4:66399097-66399116 | None:intergenic | 30.0% | |
| GAAATTCATCAAAGTTTGTG+TGG | - | chr3.4:66401390-66401409 | None:intergenic | 30.0% | |
| GTTGAAAAGAATAAGGAAAC+TGG | + | chr3.4:66400359-66400378 | MS.gene05015:CDS | 30.0% | |
| GTTGTACACTTATGATATTG+TGG | - | chr3.4:66398982-66399001 | None:intergenic | 30.0% | |
| TAACACATAATTGGAACACT+TGG | + | chr3.4:66400738-66400757 | MS.gene05015:intron | 30.0% | |
| TACATTAGACAATGACTTAC+GGG | - | chr3.4:66399153-66399172 | None:intergenic | 30.0% | |
| TCAACATAAGATTGTTACCT+AGG | - | chr3.4:66396377-66396396 | None:intergenic | 30.0% | |
| TCTCCTTGTTGAAAAGAATA+AGG | + | chr3.4:66400352-66400371 | MS.gene05015:CDS | 30.0% | |
| TGGAGGATTTGAAAAGAAAA+TGG | - | chr3.4:66399107-66399126 | None:intergenic | 30.0% | |
| TGTATGATCAAAAGATCGAA+CGG | - | chr3.4:66400928-66400947 | None:intergenic | 30.0% | |
| TTCCAATTATGTGTTACCTT+TGG | - | chr3.4:66400734-66400753 | None:intergenic | 30.0% | |
| ! | AGTTGCTTCTAACTTGTATA+TGG | + | chr3.4:66399847-66399866 | MS.gene05015:intron | 30.0% |
| ! | GACATTATGGAAGTTTTTGA+AGG | - | chr3.4:66400406-66400425 | None:intergenic | 30.0% |
| ! | GTAAGTAAAAGGTATGATGT+AGG | - | chr3.4:66396920-66396939 | None:intergenic | 30.0% |
| ! | GTTTTCGAACTATTTGAATG+AGG | + | chr3.4:66400113-66400132 | MS.gene05015:intron | 30.0% |
| !! | TCGAGTTCTGGATAAATAAA+TGG | - | chr3.4:66400535-66400554 | None:intergenic | 30.0% |
| !!! | GGGTATTTTTAAGTTTTTGG+TGG | - | chr3.4:66397610-66397629 | None:intergenic | 30.0% |
| !!! | TGGGGGAGTATTTTTTTAAT+TGG | - | chr3.4:66399816-66399835 | None:intergenic | 30.0% |
| AAAAGAGGGACTCGAAAAAA+TGG | + | chr3.4:66401303-66401322 | MS.gene05015:CDS | 35.0% | |
| AAAGAGGGACTCGAAAAAAT+GGG | + | chr3.4:66401304-66401323 | MS.gene05015:CDS | 35.0% | |
| AAAGAGGTTAAGCTAAGTGA+AGG | + | chr3.4:66400209-66400228 | MS.gene05015:CDS | 35.0% | |
| AACGATGAATTGATGCTTGA+TGG | + | chr3.4:66396754-66396773 | MS.gene05015:CDS | 35.0% | |
| AAGGATGCCAAATTCAATCT+AGG | - | chr3.4:66396784-66396803 | None:intergenic | 35.0% | |
| AATCCAGATTTCTTGATTGC+GGG | + | chr3.4:66400947-66400966 | MS.gene05015:intron | 35.0% | |
| ACAATGTTGGGTTTGTCATA+AGG | - | chr3.4:66400042-66400061 | None:intergenic | 35.0% | |
| ACATAATATATGCAAGGTCC+AGG | + | chr3.4:66397798-66397817 | MS.gene05015:intron | 35.0% | |
| ACCACCACAAAAAATATGTC+AGG | + | chr3.4:66397833-66397852 | MS.gene05015:intron | 35.0% | |
| ACTAATACGTCTTGGTTATG+AGG | + | chr3.4:66401108-66401127 | MS.gene05015:CDS | 35.0% | |
| AGAGAGAAATTACTGCGATT+TGG | + | chr3.4:66401689-66401708 | MS.gene05015:CDS | 35.0% | |
| AGATGTTGGTACTCATGAAA+AGG | - | chr3.4:66399607-66399626 | None:intergenic | 35.0% | |
| AGGATGCCAAATTCAATCTA+GGG | - | chr3.4:66396783-66396802 | None:intergenic | 35.0% | |
| ATAAACACAAGTTGTGCGTT+AGG | + | chr3.4:66397069-66397088 | MS.gene05015:intron | 35.0% | |
| ATGAGAAGTTCAACTTGTGA+AGG | + | chr3.4:66400145-66400164 | MS.gene05015:intron | 35.0% | |
| ATGATGAGTTTATCACACTC+AGG | - | chr3.4:66396826-66396845 | None:intergenic | 35.0% | |
| ATGTGAAAGATGAGTTCTTC+AGG | - | chr3.4:66400667-66400686 | None:intergenic | 35.0% | |
| ATTAAGGCAATGTCAAAGAG+AGG | - | chr3.4:66397163-66397182 | None:intergenic | 35.0% | |
| CAATCCAGATTTCTTGATTG+CGG | + | chr3.4:66400946-66400965 | MS.gene05015:intron | 35.0% | |
| CATAACCAAGACGTATTAGT+TGG | - | chr3.4:66401108-66401127 | None:intergenic | 35.0% | |
| CATAATATATGCAAGGTCCA+GGG | + | chr3.4:66397799-66397818 | MS.gene05015:intron | 35.0% | |
| CATGAAGTTGTGAAAGACAA+TGG | + | chr3.4:66401628-66401647 | MS.gene05015:CDS | 35.0% | |
| CTCCAAAGGTAACACATAAT+TGG | + | chr3.4:66400729-66400748 | MS.gene05015:intron | 35.0% | |
| GACAAATATCATGGGATTGA+GGG | + | chr3.4:66399496-66399515 | MS.gene05015:intron | 35.0% | |
| GATGTTGGTACTCATGAAAA+GGG | - | chr3.4:66399606-66399625 | None:intergenic | 35.0% | |
| GATTTGGAAGAAGTTTGTGA+TGG | + | chr3.4:66401705-66401724 | MS.gene05015:CDS | 35.0% | |
| GGTTGATTATACGTTGTCTA+GGG | - | chr3.4:66398336-66398355 | None:intergenic | 35.0% | |
| GTCAACGTAGTTCTTGTTAA+TGG | - | chr3.4:66396854-66396873 | None:intergenic | 35.0% | |
| GTCATTGTCTAATGTAGTTC+GGG | + | chr3.4:66399157-66399176 | MS.gene05015:intron | 35.0% | |
| TAACAAGAACTACGTTGACA+TGG | + | chr3.4:66396855-66396874 | MS.gene05015:CDS | 35.0% | |
| TAAGGAAAGAAGAAGATACC+AGG | - | chr3.4:66397128-66397147 | None:intergenic | 35.0% | |
| TACTACCAACTAATACGTCT+TGG | + | chr3.4:66401100-66401119 | MS.gene05015:CDS | 35.0% | |
| TATTTATCCAGAACTCGAGT+GGG | + | chr3.4:66400537-66400556 | MS.gene05015:CDS | 35.0% | |
| TGAGTGTGATAAACTCATCA+TGG | + | chr3.4:66396825-66396844 | MS.gene05015:CDS | 35.0% | |
| TGCACCACTTAAAGAAAATG+AGG | + | chr3.4:66399915-66399934 | MS.gene05015:CDS | 35.0% | |
| TGGAAACCCTAGATTGAATT+TGG | + | chr3.4:66396774-66396793 | MS.gene05015:CDS | 35.0% | |
| TGGTTGATTATACGTTGTCT+AGG | - | chr3.4:66398337-66398356 | None:intergenic | 35.0% | |
| TTATTTATCCAGAACTCGAG+TGG | + | chr3.4:66400536-66400555 | MS.gene05015:CDS | 35.0% | |
| TTCAACTTGTGAAGGTTTGT+TGG | + | chr3.4:66400153-66400172 | MS.gene05015:intron | 35.0% | |
| ! | AAGCAACTACTAGTGTTGTT+GGG | - | chr3.4:66399835-66399854 | None:intergenic | 35.0% |
| ! | ATTCGCAAGATACTTTGAAG+TGG | + | chr3.4:66400181-66400200 | MS.gene05015:CDS | 35.0% |
| ! | CAATTTTAGGCACATCTTGT+GGG | + | chr3.4:66397973-66397992 | MS.gene05015:intron | 35.0% |
| ! | CACAAGTTGAACTTCTCATA+AGG | - | chr3.4:66400144-66400163 | None:intergenic | 35.0% |
| ! | TAAAAGGTATGATGTAGGGA+AGG | - | chr3.4:66396915-66396934 | None:intergenic | 35.0% |
| ! | TCAACTTGTGAAGGTTTGTT+GGG | + | chr3.4:66400154-66400173 | MS.gene05015:intron | 35.0% |
| ! | TCAATTTTAGGCACATCTTG+TGG | + | chr3.4:66397972-66397991 | MS.gene05015:intron | 35.0% |
| !! | AAGATGATGACAGTCTTGTT+AGG | + | chr3.4:66399231-66399250 | MS.gene05015:intron | 35.0% |
| !! | CTTTGAAGTGGAATTGAAAG+AGG | + | chr3.4:66400193-66400212 | MS.gene05015:CDS | 35.0% |
| !! | CTTTGCATTAACTTGTTGCA+GGG | + | chr3.4:66401235-66401254 | MS.gene05015:intron | 35.0% |
| !! | TCTTTGCATTAACTTGTTGC+AGG | + | chr3.4:66401234-66401253 | MS.gene05015:intron | 35.0% |
| !! | TTTGCATTAACTTGTTGCAG+GGG | + | chr3.4:66401236-66401255 | MS.gene05015:intron | 35.0% |
| !!! | ACATATTTTTTGTGGTGGTC+GGG | - | chr3.4:66397832-66397851 | None:intergenic | 35.0% |
| !!! | GACATATTTTTTGTGGTGGT+CGG | - | chr3.4:66397833-66397852 | None:intergenic | 35.0% |
| !!! | GCCGGGTATTTTTAAGTTTT+TGG | - | chr3.4:66397613-66397632 | None:intergenic | 35.0% |
| !!! | TCCTGACATATTTTTTGTGG+TGG | - | chr3.4:66397837-66397856 | None:intergenic | 35.0% |
| AAAGAAAATGAGGCTGCAGT+TGG | + | chr3.4:66399925-66399944 | MS.gene05015:CDS | 40.0% | |
| AACAAGACTGTCATGAATGG+AGG | - | chr3.4:66399124-66399143 | None:intergenic | 40.0% | |
| AACATTGTGTCGAAAGACGA+CGG | + | chr3.4:66401334-66401353 | MS.gene05015:CDS | 40.0% | |
| AAGAGGGACTCGAAAAAATG+GGG | + | chr3.4:66401305-66401324 | MS.gene05015:CDS | 40.0% | |
| ATAACACTCCGGTGATATTG+TGG | + | chr3.4:66398930-66398949 | MS.gene05015:intron | 40.0% | |
| ATCCAGATTTCTTGATTGCG+GGG | + | chr3.4:66400948-66400967 | MS.gene05015:intron | 40.0% | |
| ATCCTTGGTTCAACGCTAAA+TGG | + | chr3.4:66400299-66400318 | MS.gene05015:CDS | 40.0% | |
| ATCCTTTGTGACAACATGGA+TGG | + | chr3.4:66396798-66396817 | MS.gene05015:CDS | 40.0% | |
| ATGTCAGAACTTCACTTCCT+AGG | + | chr3.4:66396357-66396376 | MS.gene05015:CDS | 40.0% | |
| ATTTGGTATGCTGCATCCTT+TGG | - | chr3.4:66396730-66396749 | None:intergenic | 40.0% | |
| CCTAACAAGACTGTCATGAA+TGG | - | chr3.4:66399127-66399146 | None:intergenic | 40.0% | |
| CCTAATGACAACGCGTAAAA+CGG | - | chr3.4:66401488-66401507 | None:intergenic | 40.0% | |
| CGACAAATATCATGGGATTG+AGG | + | chr3.4:66399495-66399514 | MS.gene05015:intron | 40.0% | |
| CTTTCTCTATATCAGCTACG+AGG | - | chr3.4:66401540-66401559 | None:intergenic | 40.0% | |
| GAAAGACAATGGTCAAGTAG+TGG | + | chr3.4:66401639-66401658 | MS.gene05015:CDS | 40.0% | |
| GAAGCAACTACTAGTGTTGT+TGG | - | chr3.4:66399836-66399855 | None:intergenic | 40.0% | |
| GATTGGCATTCAAAAGGAAG+TGG | + | chr3.4:66399989-66400008 | MS.gene05015:CDS | 40.0% | |
| GCGAGGATAAAGATGATAAG+TGG | + | chr3.4:66401586-66401605 | MS.gene05015:CDS | 40.0% | |
| GGCTATAATGTTAGCTGGAT+TGG | + | chr3.4:66399972-66399991 | MS.gene05015:CDS | 40.0% | |
| GTAACCAACCACAATATCAC+CGG | - | chr3.4:66398941-66398960 | None:intergenic | 40.0% | |
| GTGGCATCATACAAAGATGT+TGG | - | chr3.4:66399621-66399640 | None:intergenic | 40.0% | |
| GTTGTGAATGCCAATCTTAG+AGG | + | chr3.4:66398827-66398846 | MS.gene05015:intron | 40.0% | |
| TACTCTTCACCAATGGTAAG+CGG | - | chr3.4:66400567-66400586 | None:intergenic | 40.0% | |
| TATGTATAGCTAAGCTCACG+AGG | - | chr3.4:66397783-66397802 | None:intergenic | 40.0% | |
| TCAGAGGCTATAATGTTAGC+TGG | + | chr3.4:66399967-66399986 | MS.gene05015:CDS | 40.0% | |
| TCATTAGGGAGGATTTCTCA+AGG | + | chr3.4:66401500-66401519 | MS.gene05015:CDS | 40.0% | |
| TCCTTTGGTATAGACTCATC+TGG | - | chr3.4:66396715-66396734 | None:intergenic | 40.0% | |
| TGATCATCAGACGAAGACAA+AGG | - | chr3.4:66396508-66396527 | None:intergenic | 40.0% | |
| TGTCTATGCTGGAATTGGTT+GGG | + | chr3.4:66400615-66400634 | MS.gene05015:CDS | 40.0% | |
| TTATTGGATGAGGACAGAGT+AGG | + | chr3.4:66399755-66399774 | MS.gene05015:intron | 40.0% | |
| TTGTCTATGCTGGAATTGGT+TGG | + | chr3.4:66400614-66400633 | MS.gene05015:CDS | 40.0% | |
| TTTACCCTCAACTTCTCCAA+AGG | + | chr3.4:66400715-66400734 | MS.gene05015:CDS | 40.0% | |
| TTTGGAGAAGTTGAGGGTAA+AGG | - | chr3.4:66400716-66400735 | None:intergenic | 40.0% | |
| ! | AAATACGGTCTTGTCTATGC+TGG | + | chr3.4:66400604-66400623 | MS.gene05015:CDS | 40.0% |
| ! | AGCAACTACTAGTGTTGTTG+GGG | - | chr3.4:66399834-66399853 | None:intergenic | 40.0% |
| ! | CGTTTTACGCGTTGTCATTA+GGG | + | chr3.4:66401486-66401505 | MS.gene05015:CDS | 40.0% |
| ! | GCAGCCTCATTTTCTTTAAG+TGG | - | chr3.4:66399922-66399941 | None:intergenic | 40.0% |
| ! | GCAGGGGTATAAAAATGTGA+TGG | + | chr3.4:66401252-66401271 | MS.gene05015:intron | 40.0% |
| ! | GGTAGTATTGAGCAATGACT+TGG | - | chr3.4:66401087-66401106 | None:intergenic | 40.0% |
| ! | GTATGTAAAAGGGGTACGTT+TGG | - | chr3.4:66401146-66401165 | None:intergenic | 40.0% |
| ! | GTTACCTTTGGAGAAGTTGA+GGG | - | chr3.4:66400722-66400741 | None:intergenic | 40.0% |
| ! | TATGATGCCACTGTTAGCTT+TGG | + | chr3.4:66399630-66399649 | MS.gene05015:intron | 40.0% |
| ! | TCGAAATCCACAAAAGTGCA+CGG | - | chr3.4:66400790-66400809 | None:intergenic | 40.0% |
| ! | TGAGCTTAGCTTAGTTGGTA+TGG | + | chr3.4:66397537-66397556 | MS.gene05015:intron | 40.0% |
| ! | TGTTACCTTTGGAGAAGTTG+AGG | - | chr3.4:66400723-66400742 | None:intergenic | 40.0% |
| !! | CCATTCATGACAGTCTTGTT+AGG | + | chr3.4:66399124-66399143 | MS.gene05015:intron | 40.0% |
| !! | CTATGTAATGGACCCTCAAA+AGG | + | chr3.4:66400235-66400254 | MS.gene05015:CDS | 40.0% |
| !! | GGAAGAAGTTTGTGATGGAT+AGG | + | chr3.4:66401710-66401729 | MS.gene05015:CDS | 40.0% |
| !! | GGTTGCTAAAAAGAGTGCTT+TGG | + | chr3.4:66401660-66401679 | MS.gene05015:CDS | 40.0% |
| !! | GTTGATGATCACATGAAGTG+AGG | - | chr3.4:66396484-66396503 | None:intergenic | 40.0% |
| !! | TAGCTGGATTGGCATTCAAA+AGG | + | chr3.4:66399983-66400002 | MS.gene05015:CDS | 40.0% |
| !! | TTCAAATCTCCGACTTGTTG+AGG | + | chr3.4:66401407-66401426 | MS.gene05015:CDS | 40.0% |
| !!! | CATATTTTTTGTGGTGGTCG+GGG | - | chr3.4:66397831-66397850 | None:intergenic | 40.0% |
| !!! | TTTAAGTTTTTGGTGGTGGC+CGG | - | chr3.4:66397603-66397622 | None:intergenic | 40.0% |
| AAGGATAGCAGCAACACAGA+TGG | - | chr3.4:66400285-66400304 | None:intergenic | 45.0% | |
| AAGGTCTAGCGTTCAAATCC+CGG | + | chr3.4:66397581-66397600 | MS.gene05015:intron | 45.0% | |
| AATTGGGGAGTAGTTAACGG+AGG | - | chr3.4:66397233-66397252 | None:intergenic | 45.0% | |
| ACGGTTATGTGTTGAGCATC+CGG | - | chr3.4:66401469-66401488 | None:intergenic | 45.0% | |
| AGAAGCAAAGGTTGAGTGGA+CGG | - | chr3.4:66396333-66396352 | None:intergenic | 45.0% | |
| AGCTTGATTCACTTACTGCG+AGG | + | chr3.4:66401569-66401588 | MS.gene05015:CDS | 45.0% | |
| ATGGGACACTCCTATTCATG+TGG | + | chr3.4:66400483-66400502 | MS.gene05015:CDS | 45.0% | |
| ATGTGCCATAGTCGTGTGAT+CGG | + | chr3.4:66400829-66400848 | MS.gene05015:intron | 45.0% | |
| ATTCATGTGGATGCAGCTAG+TGG | + | chr3.4:66400496-66400515 | MS.gene05015:CDS | 45.0% | |
| ATTGGGGAGTAGTTAACGGA+GGG | - | chr3.4:66397232-66397251 | None:intergenic | 45.0% | |
| ATTTGGGTGGTTGGCGATAT+TGG | - | chr3.4:66399070-66399089 | None:intergenic | 45.0% | |
| CTAGCTGCATCCACATGAAT+AGG | - | chr3.4:66400496-66400515 | None:intergenic | 45.0% | |
| CTCCATCCATGTTGTCACAA+AGG | - | chr3.4:66396803-66396822 | None:intergenic | 45.0% | |
| CTGGAATTGGTTGGGCTATT+TGG | + | chr3.4:66400623-66400642 | MS.gene05015:CDS | 45.0% | |
| GACAAACCCAACATTGTCAC+TGG | + | chr3.4:66400045-66400064 | MS.gene05015:CDS | 45.0% | |
| GAGAAGTTGAGGGTAAAGGT+AGG | - | chr3.4:66400712-66400731 | None:intergenic | 45.0% | |
| GCCAGATGAGTCTATACCAA+AGG | + | chr3.4:66396711-66396730 | MS.gene05015:CDS | 45.0% | |
| GGTGTAATCAGGCAGCATTT+GGG | - | chr3.4:66399086-66399105 | None:intergenic | 45.0% | |
| TAGTTCCGATCACACGACTA+TGG | - | chr3.4:66400837-66400856 | None:intergenic | 45.0% | |
| TCAAAAGGCTGTGGAATTGG+TGG | + | chr3.4:66400250-66400269 | MS.gene05015:CDS | 45.0% | |
| TCTGACATAGCGAGAAGCAA+AGG | - | chr3.4:66396345-66396364 | None:intergenic | 45.0% | |
| TGGCATCCTTTGTGACAACA+TGG | + | chr3.4:66396794-66396813 | MS.gene05015:CDS | 45.0% | |
| TGGTGTAATCAGGCAGCATT+TGG | - | chr3.4:66399087-66399106 | None:intergenic | 45.0% | |
| TGTGTGGTCCTTCAATGTGA+AGG | - | chr3.4:66401374-66401393 | None:intergenic | 45.0% | |
| TTCAATGTGAAGGCCACCAA+AGG | - | chr3.4:66401364-66401383 | None:intergenic | 45.0% | |
| TTCCCCGCAATCAAGAAATC+TGG | - | chr3.4:66400953-66400972 | None:intergenic | 45.0% | |
| TTGGCTCCAGTGACAATGTT+GGG | - | chr3.4:66400054-66400073 | None:intergenic | 45.0% | |
| TTGGGCTATTTGGAGAAGCA+AGG | + | chr3.4:66400633-66400652 | MS.gene05015:CDS | 45.0% | |
| TTTACGCGTTGTCATTAGGG+AGG | + | chr3.4:66401489-66401508 | MS.gene05015:CDS | 45.0% | |
| ! | ACCAATTCCACAGCCTTTTG+AGG | - | chr3.4:66400251-66400270 | None:intergenic | 45.0% |
| ! | ATCTGTGTTGCTGCTATCCT+TGG | + | chr3.4:66400284-66400303 | MS.gene05015:CDS | 45.0% |
| ! | ATTGGCTCCAGTGACAATGT+TGG | - | chr3.4:66400055-66400074 | None:intergenic | 45.0% |
| ! | CCAATTCCACAGCCTTTTGA+GGG | - | chr3.4:66400250-66400269 | None:intergenic | 45.0% |
| ! | CCGTTTTACGCGTTGTCATT+AGG | + | chr3.4:66401485-66401504 | MS.gene05015:CDS | 45.0% |
| ! | CGAAATCCACAAAAGTGCAC+GGG | - | chr3.4:66400789-66400808 | None:intergenic | 45.0% |
| ! | CTCCATTTAGCGTTGAACCA+AGG | - | chr3.4:66400304-66400323 | None:intergenic | 45.0% |
| ! | CTTTGGAGGTCTCAATACTC+AGG | + | chr3.4:66399647-66399666 | MS.gene05015:intron | 45.0% |
| ! | GAAATCCACAAAAGTGCACG+GGG | - | chr3.4:66400788-66400807 | None:intergenic | 45.0% |
| ! | GCAACTACTAGTGTTGTTGG+GGG | - | chr3.4:66399833-66399852 | None:intergenic | 45.0% |
| ! | GGTCTTGTCTATGCTGGAAT+TGG | + | chr3.4:66400610-66400629 | MS.gene05015:CDS | 45.0% |
| ! | TTTGGTGGCCTTCACATTGA+AGG | + | chr3.4:66401363-66401382 | MS.gene05015:CDS | 45.0% |
| ! | TTTTGTGGATTTCGATCCCC+TGG | + | chr3.4:66400795-66400814 | MS.gene05015:intron | 45.0% |
| !!! | TTAAGTTTTTGGTGGTGGCC+GGG | - | chr3.4:66397602-66397621 | None:intergenic | 45.0% |
| !! | ACAAAATAAAAAATATTTAT+CGG | + | chr3.4:66399363-66399382 | MS.gene05015:intron | 5.0% |
| !!! | AAACAATTTTTTAAAAAATT+GGG | - | chr3.4:66397249-66397268 | None:intergenic | 5.0% |
| !!! | AATTTTATTTTAGAATTAAT+TGG | - | chr3.4:66397708-66397727 | None:intergenic | 5.0% |
| !!! | TAAATAAAATTTCTTTTTAT+TGG | + | chr3.4:66399739-66399758 | MS.gene05015:intron | 5.0% |
| AATGGACCCTCAAAAGGCTG+TGG | + | chr3.4:66400241-66400260 | MS.gene05015:CDS | 50.0% | |
| AGCGAGAAGCAAAGGTTGAG+TGG | - | chr3.4:66396337-66396356 | None:intergenic | 50.0% | |
| CACTCCGGTGATATTGTGGT+TGG | + | chr3.4:66398934-66398953 | MS.gene05015:intron | 50.0% | |
| CCAACTAAGCTAAGCTCACG+AGG | - | chr3.4:66397535-66397554 | None:intergenic | 50.0% | |
| CCCTCAAAAGGCTGTGGAAT+TGG | + | chr3.4:66400247-66400266 | MS.gene05015:CDS | 50.0% | |
| CCTCGTGAGCTTAGCTTAGT+TGG | + | chr3.4:66397532-66397551 | MS.gene05015:intron | 50.0% | |
| GAAAGACGACGGTGTACCTT+TGG | + | chr3.4:66401345-66401364 | MS.gene05015:CDS | 50.0% | |
| GAGACCTCCAAAGCTAACAG+TGG | - | chr3.4:66399640-66399659 | None:intergenic | 50.0% | |
| GTAATCAGGCAGCATTTGGG+TGG | - | chr3.4:66399083-66399102 | None:intergenic | 50.0% | |
| GTGGACGGAAACATCAGACT+CGG | - | chr3.4:66396318-66396337 | None:intergenic | 50.0% | |
| GTGGGATTTCCGCTTACCAT+TGG | + | chr3.4:66400555-66400574 | MS.gene05015:CDS | 50.0% | |
| GTTATGTGTTGAGCATCCGG+TGG | - | chr3.4:66401466-66401485 | None:intergenic | 50.0% | |
| TGATGTAGGGAAGGTCTACC+TGG | - | chr3.4:66396906-66396925 | None:intergenic | 50.0% | |
| ! | AATGAGGCTGCAGTTGGTGT+TGG | + | chr3.4:66399931-66399950 | MS.gene05015:CDS | 50.0% |
| ! | ACAAACCCCGTGCACTTTTG+TGG | + | chr3.4:66400780-66400799 | MS.gene05015:intron | 50.0% |
| ! | CACATGCTTGCTAGATCCAG+GGG | - | chr3.4:66400814-66400833 | None:intergenic | 50.0% |
| ! | GCACATGCTTGCTAGATCCA+GGG | - | chr3.4:66400815-66400834 | None:intergenic | 50.0% |
| !! | GATGCCACTGTTAGCTTTGG+AGG | + | chr3.4:66399633-66399652 | MS.gene05015:intron | 50.0% |
| AAGGTCTACCTGGAGCTCAG+TGG | - | chr3.4:66396896-66396915 | None:intergenic | 55.0% | |
| AGACGACGGTGTACCTTTGG+TGG | + | chr3.4:66401348-66401367 | MS.gene05015:CDS | 55.0% | |
| CATGTGGATGCAGCTAGTGG+TGG | + | chr3.4:66400499-66400518 | MS.gene05015:CDS | 55.0% | |
| CGGAAATCCCACTCGAGTTC+TGG | - | chr3.4:66400547-66400566 | None:intergenic | 55.0% | |
| GACGGAAACATCAGACTCGG+AGG | - | chr3.4:66396315-66396334 | None:intergenic | 55.0% | |
| TCAGGCAGCATTTGGGTGGT+TGG | - | chr3.4:66399079-66399098 | None:intergenic | 55.0% | |
| TCCAGCATACAGCATGCCAC+CGG | + | chr3.4:66401447-66401466 | MS.gene05015:CDS | 55.0% | |
| TGTCACTGGAGCCAATGTCC+AGG | + | chr3.4:66400059-66400078 | MS.gene05015:CDS | 55.0% | |
| ! | ACTTGTTGAGGCGCTTCGGA+TGG | + | chr3.4:66401419-66401438 | MS.gene05015:CDS | 55.0% |
| ! | GGCACATGCTTGCTAGATCC+AGG | - | chr3.4:66400816-66400835 | None:intergenic | 55.0% |
| ! | TCCGAAGCGCCTCAACAAGT+CGG | - | chr3.4:66401419-66401438 | None:intergenic | 55.0% |
| !! | GCAGTTGGTGTTGGCACTGT+TGG | + | chr3.4:66399940-66399959 | MS.gene05015:CDS | 55.0% |
| !! | TCCGACTTGTTGAGGCGCTT+CGG | + | chr3.4:66401415-66401434 | MS.gene05015:CDS | 55.0% |
| !! | TGGCACTGTTGGCTCATCAG+AGG | + | chr3.4:66399951-66399970 | MS.gene05015:CDS | 55.0% |
| ACCTGGAGCTCAGTGGTGAC+AGG | - | chr3.4:66396889-66396908 | None:intergenic | 60.0% | |
| CCTGGAGCTCAGTGGTGACA+GGG | - | chr3.4:66396888-66396907 | None:intergenic | 60.0% | |
| TCCGGTGGCATGCTGTATGC+TGG | - | chr3.4:66401451-66401470 | None:intergenic | 60.0% | |
| CCCTGTCACCACTGAGCTCC+AGG | + | chr3.4:66396885-66396904 | MS.gene05015:CDS | 65.0% | |
| GGTGGTCGGGGTTTGAACCC+TGG | - | chr3.4:66397819-66397838 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 66396293 | 66401768 | 66396293 | ID=MS.gene05015 |
| chr3.4 | mRNA | 66396293 | 66401768 | 66396293 | ID=MS.gene05015.t1;Parent=MS.gene05015 |
| chr3.4 | exon | 66396293 | 66396378 | 66396293 | ID=MS.gene05015.t1.exon1;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66396293 | 66396378 | 66396293 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66396702 | 66396906 | 66396702 | ID=MS.gene05015.t1.exon2;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66396702 | 66396906 | 66396702 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66399880 | 66400080 | 66399880 | ID=MS.gene05015.t1.exon3;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66399880 | 66400080 | 66399880 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66400167 | 66400381 | 66400167 | ID=MS.gene05015.t1.exon4;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66400167 | 66400381 | 66400167 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66400483 | 66400736 | 66400483 | ID=MS.gene05015.t1.exon5;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66400483 | 66400736 | 66400483 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66401077 | 66401129 | 66401077 | ID=MS.gene05015.t1.exon6;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66401077 | 66401129 | 66401077 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| chr3.4 | exon | 66401256 | 66401768 | 66401256 | ID=MS.gene05015.t1.exon7;Parent=MS.gene05015.t1 |
| chr3.4 | CDS | 66401256 | 66401768 | 66401256 | ID=cds.MS.gene05015.t1;Parent=MS.gene05015.t1 |
| Gene Sequence |
| Protein sequence |
