Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07369.t1 | XP_003591301.1 | 98.2 | 505 | 9 | 0 | 1 | 505 | 1 | 505 | 1.70E-257 | 898.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07369.t1 | Q9M115 | 62.6 | 514 | 173 | 9 | 2 | 505 | 4 | 508 | 8.3e-149 | 528.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07369.t1 | G7IBQ1 | 98.2 | 505 | 9 | 0 | 1 | 505 | 1 | 505 | 1.2e-257 | 898.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049328 | MS.gene07369 | 0.805376 | 1.38E-49 | -1.69E-46 |
MS.gene049418 | MS.gene07369 | 0.801555 | 8.52E-49 | -1.69E-46 |
MS.gene050297 | MS.gene07369 | 0.80157 | 8.46E-49 | -1.69E-46 |
MS.gene050310 | MS.gene07369 | 0.806575 | 7.69E-50 | -1.69E-46 |
MS.gene052732 | MS.gene07369 | 0.810401 | 1.17E-50 | -1.69E-46 |
MS.gene053144 | MS.gene07369 | 0.824773 | 6.73E-54 | -1.69E-46 |
MS.gene054584 | MS.gene07369 | 0.832095 | 1.15E-55 | -1.69E-46 |
MS.gene055537 | MS.gene07369 | 0.825445 | 4.67E-54 | -1.69E-46 |
MS.gene057004 | MS.gene07369 | 0.820974 | 5.17E-53 | -1.69E-46 |
MS.gene058197 | MS.gene07369 | 0.834589 | 2.75E-56 | -1.69E-46 |
MS.gene058198 | MS.gene07369 | 0.831862 | 1.31E-55 | -1.69E-46 |
MS.gene059300 | MS.gene07369 | 0.833141 | 6.32E-56 | -1.69E-46 |
MS.gene06057 | MS.gene07369 | 0.826376 | 2.81E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07369.t1 | MTR_1g085980 | 98.218 | 505 | 9 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1015 |
MS.gene07369.t1 | MTR_3g115950 | 34.937 | 395 | 235 | 7 | 2 | 393 | 3 | 378 | 6.71e-69 | 233 |
MS.gene07369.t1 | MTR_4g076120 | 37.037 | 324 | 176 | 4 | 1 | 298 | 2 | 323 | 2.12e-67 | 231 |
MS.gene07369.t1 | MTR_4g082560 | 27.787 | 583 | 313 | 12 | 1 | 490 | 1 | 568 | 1.69e-62 | 215 |
MS.gene07369.t1 | MTR_5g042870 | 31.368 | 475 | 246 | 13 | 1 | 421 | 1 | 449 | 3.94e-57 | 201 |
MS.gene07369.t1 | MTR_3g115950 | 37.597 | 258 | 144 | 4 | 141 | 393 | 59 | 304 | 1.77e-50 | 181 |
MS.gene07369.t1 | MTR_4g076120 | 52.055 | 146 | 70 | 0 | 153 | 298 | 104 | 249 | 8.63e-50 | 181 |
MS.gene07369.t1 | MTR_6g033315 | 27.228 | 202 | 121 | 5 | 155 | 344 | 149 | 336 | 2.40e-14 | 75.5 |
MS.gene07369.t1 | MTR_5g042870 | 28.395 | 243 | 117 | 9 | 210 | 421 | 82 | 298 | 2.93e-14 | 75.5 |
MS.gene07369.t1 | MTR_4g116160 | 40.909 | 88 | 46 | 2 | 139 | 220 | 353 | 440 | 3.76e-14 | 75.1 |
MS.gene07369.t1 | MTR_4g116160 | 40.909 | 88 | 46 | 2 | 139 | 220 | 353 | 440 | 5.45e-14 | 75.1 |
MS.gene07369.t1 | MTR_4g116160 | 40.909 | 88 | 46 | 2 | 139 | 220 | 180 | 267 | 5.51e-14 | 74.7 |
MS.gene07369.t1 | MTR_7g114080 | 26.667 | 225 | 137 | 7 | 114 | 328 | 127 | 333 | 1.79e-13 | 72.4 |
MS.gene07369.t1 | MTR_7g114080 | 28.070 | 228 | 139 | 7 | 114 | 328 | 127 | 342 | 3.28e-13 | 71.6 |
MS.gene07369.t1 | MTR_7g114080 | 36.842 | 114 | 55 | 5 | 102 | 211 | 117 | 217 | 3.38e-12 | 68.2 |
MS.gene07369.t1 | MTR_6g038020 | 30.075 | 133 | 83 | 3 | 155 | 287 | 136 | 258 | 4.46e-12 | 68.2 |
MS.gene07369.t1 | MTR_1g098390 | 30.075 | 133 | 84 | 3 | 155 | 287 | 135 | 258 | 4.84e-12 | 68.2 |
MS.gene07369.t1 | MTR_6g038020 | 30.075 | 133 | 83 | 3 | 155 | 287 | 139 | 261 | 5.10e-12 | 68.2 |
MS.gene07369.t1 | MTR_3g098840 | 28.571 | 133 | 85 | 3 | 155 | 287 | 150 | 272 | 6.94e-12 | 67.8 |
MS.gene07369.t1 | MTR_4g021795 | 26.816 | 179 | 100 | 5 | 141 | 305 | 87 | 248 | 7.63e-12 | 66.6 |
MS.gene07369.t1 | MTR_7g088360 | 30.075 | 133 | 79 | 3 | 155 | 287 | 161 | 279 | 7.99e-12 | 67.4 |
MS.gene07369.t1 | MTR_4g092760 | 39.796 | 98 | 51 | 4 | 157 | 251 | 364 | 456 | 8.18e-12 | 67.8 |
MS.gene07369.t1 | MTR_4g092760 | 38.776 | 98 | 52 | 4 | 157 | 251 | 275 | 367 | 9.98e-12 | 67.4 |
MS.gene07369.t1 | MTR_7g114080 | 36.842 | 114 | 55 | 5 | 102 | 211 | 117 | 217 | 1.26e-11 | 66.2 |
MS.gene07369.t1 | MTR_7g088350 | 27.068 | 133 | 81 | 2 | 155 | 287 | 162 | 278 | 2.54e-11 | 66.2 |
MS.gene07369.t1 | MTR_5g023230 | 42.373 | 59 | 34 | 0 | 158 | 216 | 170 | 228 | 2.54e-11 | 64.3 |
MS.gene07369.t1 | MTR_7g083480 | 29.545 | 132 | 81 | 3 | 157 | 287 | 151 | 271 | 3.24e-11 | 65.9 |
MS.gene07369.t1 | MTR_1g094610 | 33.824 | 136 | 70 | 5 | 169 | 303 | 108 | 224 | 5.85e-11 | 63.5 |
MS.gene07369.t1 | MTR_5g023230 | 42.373 | 59 | 34 | 0 | 158 | 216 | 150 | 208 | 7.21e-11 | 63.9 |
MS.gene07369.t1 | MTR_5g023230 | 42.373 | 59 | 34 | 0 | 158 | 216 | 170 | 228 | 7.42e-11 | 63.9 |
MS.gene07369.t1 | MTR_1g112830 | 45.000 | 60 | 33 | 0 | 157 | 216 | 462 | 521 | 9.21e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07369.t1 | AT4G01730 | 63.035 | 514 | 171 | 9 | 2 | 505 | 4 | 508 | 0.0 | 541 |
MS.gene07369.t1 | AT2G33640 | 34.750 | 400 | 209 | 9 | 2 | 370 | 3 | 381 | 2.25e-71 | 237 |
MS.gene07369.t1 | AT3G22180 | 36.449 | 321 | 189 | 4 | 1 | 306 | 2 | 322 | 5.86e-65 | 223 |
MS.gene07369.t1 | AT4G15080 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 9.61e-65 | 223 |
MS.gene07369.t1 | AT4G15080 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 9.61e-65 | 223 |
MS.gene07369.t1 | AT1G69420 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 8.33e-62 | 213 |
MS.gene07369.t1 | AT1G69420 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 8.33e-62 | 213 |
MS.gene07369.t1 | AT3G26935 | 32.090 | 134 | 79 | 3 | 155 | 287 | 148 | 270 | 1.53e-15 | 79.3 |
MS.gene07369.t1 | AT3G48760 | 27.228 | 202 | 128 | 5 | 155 | 348 | 157 | 347 | 6.34e-15 | 77.4 |
MS.gene07369.t1 | AT5G20350 | 36.154 | 130 | 74 | 4 | 92 | 221 | 316 | 436 | 9.99e-14 | 74.3 |
MS.gene07369.t1 | AT5G41060 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.56e-13 | 71.6 |
MS.gene07369.t1 | AT5G41060 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.56e-13 | 71.6 |
MS.gene07369.t1 | AT3G04970 | 42.105 | 76 | 39 | 2 | 153 | 224 | 66 | 140 | 2.72e-13 | 71.2 |
MS.gene07369.t1 | AT2G14255 | 43.836 | 73 | 41 | 0 | 148 | 220 | 355 | 427 | 2.83e-13 | 72.4 |
MS.gene07369.t1 | AT5G41060 | 29.851 | 134 | 82 | 3 | 155 | 287 | 146 | 268 | 4.42e-13 | 71.6 |
MS.gene07369.t1 | AT3G56930 | 28.148 | 135 | 83 | 3 | 155 | 287 | 145 | 267 | 4.70e-13 | 71.6 |
MS.gene07369.t1 | AT4G24630 | 30.075 | 133 | 83 | 3 | 155 | 287 | 135 | 257 | 5.51e-13 | 71.2 |
MS.gene07369.t1 | AT5G41060 | 29.851 | 134 | 82 | 3 | 155 | 287 | 131 | 253 | 5.63e-13 | 70.9 |
MS.gene07369.t1 | AT3G04970 | 43.836 | 73 | 36 | 2 | 153 | 221 | 153 | 224 | 6.33e-13 | 70.1 |
MS.gene07369.t1 | AT3G04970 | 42.105 | 76 | 39 | 2 | 153 | 224 | 153 | 227 | 7.79e-13 | 70.5 |
MS.gene07369.t1 | AT5G50020 | 30.075 | 133 | 83 | 4 | 155 | 287 | 135 | 257 | 1.76e-12 | 69.7 |
MS.gene07369.t1 | AT5G50020 | 30.075 | 133 | 83 | 4 | 155 | 287 | 165 | 287 | 2.23e-12 | 69.3 |
MS.gene07369.t1 | AT5G04270 | 29.921 | 127 | 75 | 3 | 169 | 295 | 105 | 217 | 2.57e-12 | 67.8 |
MS.gene07369.t1 | AT3G09320 | 29.677 | 155 | 95 | 4 | 141 | 293 | 80 | 222 | 6.86e-12 | 66.6 |
MS.gene07369.t1 | AT4G22750 | 26.291 | 213 | 135 | 5 | 85 | 285 | 33 | 235 | 1.93e-11 | 65.5 |
MS.gene07369.t1 | AT5G05070 | 27.820 | 133 | 82 | 3 | 155 | 287 | 170 | 288 | 6.40e-11 | 64.7 |
Find 106 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGACTTGAAAGCCTTAA+TGG | 0.179701 | 1.2:-64685929 | None:intergenic |
CCCCTTTGATCAACACAAAA+AGG | 0.201505 | 1.2:+64685669 | MS.gene07369:CDS |
CTTAACTATGGATTCATTAT+TGG | 0.227661 | 1.2:+64684180 | MS.gene07369:CDS |
AGAGAACTACCTTTCGTATT+AGG | 0.235966 | 1.2:-64685174 | None:intergenic |
CCTGCAGAAAATCTTCTTCT+TGG | 0.247950 | 1.2:-64685947 | None:intergenic |
TTTCTTCTTCTTCTTGAAAC+TGG | 0.260618 | 1.2:-64684130 | None:intergenic |
GCAATTCCTAAGCTTAACTA+TGG | 0.264138 | 1.2:+64684168 | MS.gene07369:CDS |
AATATTGGCAATGAGGGATT+TGG | 0.269143 | 1.2:+64685866 | MS.gene07369:CDS |
CATGGGGATTTATAGTTTCC+TGG | 0.270284 | 1.2:+64682873 | MS.gene07369:CDS |
ACGTCCTCTTCATCCTTTAC+AGG | 0.290395 | 1.2:+64682741 | MS.gene07369:CDS |
AACTTCATGTATCACCATTA+AGG | 0.298327 | 1.2:+64685915 | MS.gene07369:CDS |
CTTAGGAATTGCATTCCTTT+TGG | 0.301238 | 1.2:-64684157 | None:intergenic |
AGTGGTTGAATAACTGTATT+GGG | 0.305251 | 1.2:+64684679 | MS.gene07369:intron |
AATTACCATGAAGGAAAATA+TGG | 0.329971 | 1.2:-64682962 | None:intergenic |
CTGCAATTGCGATATTTATC+AGG | 0.330793 | 1.2:+64684887 | MS.gene07369:CDS |
CAGTGGTTGAATAACTGTAT+TGG | 0.338312 | 1.2:+64684678 | MS.gene07369:intron |
AAATACAATGCCTACGATCT+TGG | 0.340037 | 1.2:-64686130 | None:intergenic |
AATACAATGCCTACGATCTT+GGG | 0.349348 | 1.2:-64686129 | None:intergenic |
AATGAGAACTAACCATTAAC+AGG | 0.349646 | 1.2:-64684743 | None:intergenic |
AGAGAATGAAGCCATGGAAT+TGG | 0.360067 | 1.2:+64685422 | MS.gene07369:CDS |
GCTTATAGTTCAGCTGCATT+GGG | 0.362020 | 1.2:+64685127 | MS.gene07369:CDS |
AGCTTATAGTTCAGCTGCAT+TGG | 0.379994 | 1.2:+64685126 | MS.gene07369:CDS |
AAGGGTTTGATCACCATTGC+AGG | 0.380383 | 1.2:+64684565 | MS.gene07369:CDS |
TTGAAAATGTGACAGTTTGT+AGG | 0.405221 | 1.2:+64682850 | MS.gene07369:intron |
GAATAGAAAAGGAGCTTCAT+AGG | 0.409924 | 1.2:+64684929 | MS.gene07369:CDS |
TCTTTCATAACAAATGGAAA+TGG | 0.412686 | 1.2:-64684315 | None:intergenic |
ATATTGGCAATGAGGGATTT+GGG | 0.413742 | 1.2:+64685867 | MS.gene07369:CDS |
AGCTTGAAACACATATTTCC+AGG | 0.415244 | 1.2:+64686062 | MS.gene07369:CDS |
TCATCATCTTTCATAACAAA+TGG | 0.417582 | 1.2:-64684321 | None:intergenic |
TCAGGTGCTTTGTGGATAAG+AGG | 0.417899 | 1.2:+64684905 | MS.gene07369:CDS |
AATGAACTGTGCTCCCTCAT+TGG | 0.434720 | 1.2:-64685791 | None:intergenic |
ATGTCGTCCTCTTTAAGATC+AGG | 0.449853 | 1.2:-64684357 | None:intergenic |
GTGTGTTTCTATACTTTCCT+CGG | 0.453785 | 1.2:+64682898 | MS.gene07369:CDS |
GAGGACCTATGACTATATTC+TGG | 0.454122 | 1.2:+64685389 | MS.gene07369:CDS |
CTTTCATAACAAATGGAAAT+GGG | 0.456489 | 1.2:-64684314 | None:intergenic |
TCAGATGACTATTACACATA+TGG | 0.457257 | 1.2:-64684989 | None:intergenic |
ATGAATCCATAGTTAAGCTT+AGG | 0.465933 | 1.2:-64684174 | None:intergenic |
TGTTCAGTTATCAGCAAAGA+TGG | 0.472599 | 1.2:+64686094 | MS.gene07369:CDS |
GATATTTATCAGGTGCTTTG+TGG | 0.473980 | 1.2:+64684897 | MS.gene07369:CDS |
TTCATTAAGACCTCTTCCAT+TGG | 0.478810 | 1.2:+64685808 | MS.gene07369:CDS |
TGAAGTTAGCAGGTGTGTCT+AGG | 0.480378 | 1.2:+64686038 | MS.gene07369:CDS |
AAAATCCTTGACATTAGTGT+TGG | 0.485995 | 1.2:-64685507 | None:intergenic |
AACTGAACATAGAACCTGCC+TGG | 0.487655 | 1.2:-64686080 | None:intergenic |
CACTCGTCTTCAACGGATCA+AGG | 0.488073 | 1.2:-64684272 | None:intergenic |
TTCACGTAAGCATTAACCCT+TGG | 0.489341 | 1.2:+64685693 | MS.gene07369:CDS |
ACTTGTAATCGTTGCGTTGA+AGG | 0.491089 | 1.2:+64684546 | MS.gene07369:CDS |
ATGTGACAGTTTGTAGGCAT+GGG | 0.494330 | 1.2:+64682856 | MS.gene07369:intron |
TGTGAACAGCTCATCATTGA+AGG | 0.494729 | 1.2:+64684859 | MS.gene07369:intron |
GGGTGGAAAAGAAGTTGCTT+AGG | 0.494730 | 1.2:+64684229 | MS.gene07369:CDS |
CATTGCCAGAATATAGTCAT+AGG | 0.496409 | 1.2:-64685394 | None:intergenic |
GGATAAGAGGGGAATAGAAA+AGG | 0.502714 | 1.2:+64684918 | MS.gene07369:CDS |
GTCAACTTTACGAGTTTCCA+AGG | 0.513589 | 1.2:-64685710 | None:intergenic |
TTGAAACTGGCTCTGTCTGT+AGG | 0.514898 | 1.2:-64684117 | None:intergenic |
TTTGTTTCATAAAGGGGATG+AGG | 0.518890 | 1.2:+64685370 | MS.gene07369:intron |
CTTGTAATCGTTGCGTTGAA+GGG | 0.519111 | 1.2:+64684547 | MS.gene07369:CDS |
ATGGTGGCAAGAAGTCCTCT+TGG | 0.521474 | 1.2:-64684970 | None:intergenic |
CAGGTGCTTTGTGGATAAGA+GGG | 0.525174 | 1.2:+64684906 | MS.gene07369:CDS |
ACTTTCCTCGGACTCTTCCT+CGG | 0.525401 | 1.2:+64682910 | MS.gene07369:CDS |
TGAAACACATATTTCCAGGC+AGG | 0.526662 | 1.2:+64686066 | MS.gene07369:CDS |
ACGCGGACCATTGACGAATG+TGG | 0.527722 | 1.2:+64685838 | MS.gene07369:CDS |
TACTTGCAGCTGAGAAAGCA+AGG | 0.530537 | 1.2:+64685747 | MS.gene07369:CDS |
GAAGTTAGCAGGTGTGTCTA+GGG | 0.530558 | 1.2:+64686039 | MS.gene07369:CDS |
ACTTGTGCACTCGTCTTCAA+CGG | 0.546561 | 1.2:-64684279 | None:intergenic |
ACAAATGGAAATGGGAGAAG+AGG | 0.548200 | 1.2:-64684306 | None:intergenic |
CAATGCTGTCATCTGATGAA+AGG | 0.552272 | 1.2:-64685464 | None:intergenic |
GTTGAAGACGAGTGCACAAG+TGG | 0.554243 | 1.2:+64684281 | MS.gene07369:CDS |
ACACTATGAGACGCCATGGT+TGG | 0.555301 | 1.2:+64682716 | None:intergenic |
AATGTGACAGTTTGTAGGCA+TGG | 0.560320 | 1.2:+64682855 | MS.gene07369:intron |
ATCAAATGACTCCAATTCCA+TGG | 0.560589 | 1.2:-64685433 | None:intergenic |
CAGCTGAGAAAGCAAGGGAA+AGG | 0.566987 | 1.2:+64685753 | MS.gene07369:CDS |
GAATAGATAAATTACCATGA+AGG | 0.567650 | 1.2:-64682971 | None:intergenic |
TTAGTGTTATCTCAGCAGTT+CGG | 0.574132 | 1.2:-64682936 | None:intergenic |
TTTACCTGTAAAGGATGAAG+AGG | 0.576281 | 1.2:-64682745 | None:intergenic |
GAGAGAAGAGAATGAAGCCA+TGG | 0.580808 | 1.2:+64685416 | MS.gene07369:CDS |
TGTCGTCCCTGATCTTAAAG+AGG | 0.582192 | 1.2:+64684350 | MS.gene07369:CDS |
TTTGTGTTGATCAAAGGGGA+AGG | 0.592051 | 1.2:-64685665 | None:intergenic |
CGTGCGAGAAAGACCAATGA+GGG | 0.592418 | 1.2:+64685778 | MS.gene07369:CDS |
AAAAGCCAACACTAATGTCA+AGG | 0.594065 | 1.2:+64685502 | MS.gene07369:CDS |
TCACGTTCTCCTAATACGAA+AGG | 0.596273 | 1.2:+64685165 | MS.gene07369:CDS |
AAGTATAGAAACACACCACC+AGG | 0.598487 | 1.2:-64682891 | None:intergenic |
AACAGATACTGACCCTGCAA+TGG | 0.599614 | 1.2:-64684578 | None:intergenic |
AGGGTTTGATCACCATTGCA+GGG | 0.600426 | 1.2:+64684566 | MS.gene07369:CDS |
ATACAATGCCTACGATCTTG+GGG | 0.601194 | 1.2:-64686128 | None:intergenic |
TGTCGTCCTCTTTAAGATCA+GGG | 0.605943 | 1.2:-64684356 | None:intergenic |
AATGCCTACGATCTTGGGGA+TGG | 0.606261 | 1.2:-64686124 | None:intergenic |
ATTCATTATTGGTCAGATTG+TGG | 0.609221 | 1.2:+64684191 | MS.gene07369:CDS |
TTATTGGTCAGATTGTGGTG+AGG | 0.621959 | 1.2:+64684196 | MS.gene07369:CDS |
GAACAGCTCATCATTGAAGG+AGG | 0.626679 | 1.2:+64684862 | MS.gene07369:intron |
AACAGCTCATCATTGAAGGA+GGG | 0.627474 | 1.2:+64684863 | MS.gene07369:intron |
GAAGAGGACGTTGCCAACCA+TGG | 0.631280 | 1.2:-64682729 | None:intergenic |
GATGACTATTACACATATGG+TGG | 0.631412 | 1.2:-64684986 | None:intergenic |
TGAACCATCCCCAAGATCGT+AGG | 0.633327 | 1.2:+64686120 | MS.gene07369:CDS |
TGTGACAGTTTGTAGGCATG+GGG | 0.633700 | 1.2:+64682857 | MS.gene07369:intron |
TCTCAGCAGTTCGGTTTCCG+AGG | 0.633761 | 1.2:-64682927 | None:intergenic |
CTTATAGTTCAGCTGCATTG+GGG | 0.635397 | 1.2:+64685128 | MS.gene07369:CDS |
ACTTGCAGCTGAGAAAGCAA+GGG | 0.638549 | 1.2:+64685748 | MS.gene07369:CDS |
TCAACTTTACGAGTTTCCAA+GGG | 0.643170 | 1.2:-64685709 | None:intergenic |
ATAGACACTATGAGACGCCA+TGG | 0.643914 | 1.2:+64682712 | None:intergenic |
GGGGATTTATAGTTTCCTGG+TGG | 0.645721 | 1.2:+64682876 | MS.gene07369:CDS |
TACCATGAAGGAAAATATGG+AGG | 0.650461 | 1.2:-64682959 | None:intergenic |
GGTTTCCGAGGAAGAGTCCG+AGG | 0.657144 | 1.2:-64682915 | None:intergenic |
TCGTGCGAGAAAGACCAATG+AGG | 0.674025 | 1.2:+64685777 | MS.gene07369:CDS |
TCAATCTTGATAGACAACCT+AGG | 0.679060 | 1.2:-64685629 | None:intergenic |
AGGTGCTTTGTGGATAAGAG+GGG | 0.684044 | 1.2:+64684907 | MS.gene07369:CDS |
CTTCCATTGGAGACAAAACG+CGG | 0.706884 | 1.2:+64685821 | MS.gene07369:CDS |
ATGCTGCTAGAGAATACCGA+TGG | 0.739752 | 1.2:-64685974 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTGATATTTTTTAATTTA+AGG | + | chr1.2:64683896-64683915 | MS.gene07369:intron | 10.0% |
!! | AACTAAAATGAAAAATAGAA+AGG | - | chr1.2:64682779-64682798 | None:intergenic | 15.0% |
!! | AAGATAATTTAAGCAAAAAA+GGG | - | chr1.2:64683611-64683630 | None:intergenic | 15.0% |
!! | CCTTTATAAAGTTTAAAAAA+TGG | + | chr1.2:64683866-64683885 | MS.gene07369:intron | 15.0% |
!!! | CCATTTTTTAAACTTTATAA+AGG | - | chr1.2:64683869-64683888 | None:intergenic | 15.0% |
!!! | TTACTAAAGAAATATTTTGA+TGG | - | chr1.2:64683774-64683793 | None:intergenic | 15.0% |
!! | AAAATGCTTATTTACTAGTT+TGG | - | chr1.2:64683662-64683681 | None:intergenic | 20.0% |
!! | AATGAATTCAATTTAGGTAA+CGG | + | chr1.2:64683241-64683260 | MS.gene07369:intron | 20.0% |
!! | AGATAATTTAAGCAAAAAAG+GGG | - | chr1.2:64683610-64683629 | None:intergenic | 20.0% |
!! | CAGAATTAATGTTAAATAGA+AGG | - | chr1.2:64685056-64685075 | None:intergenic | 20.0% |
!! | GAAGATAATTTAAGCAAAAA+AGG | - | chr1.2:64683612-64683631 | None:intergenic | 20.0% |
!! | GTCAATATTATATCGTTTAT+CGG | - | chr1.2:64683809-64683828 | None:intergenic | 20.0% |
!!! | GATTGATATTCTTTAACTTA+AGG | - | chr1.2:64683739-64683758 | None:intergenic | 20.0% |
!!! | TATTGACTTAAATAGTCTTT+CGG | + | chr1.2:64683822-64683841 | MS.gene07369:intron | 20.0% |
!!! | TGTTTGATTTGTTTCATAAA+GGG | + | chr1.2:64685363-64685382 | MS.gene07369:intron | 20.0% |
!!! | TTGTTTGATTTGTTTCATAA+AGG | + | chr1.2:64685362-64685381 | MS.gene07369:intron | 20.0% |
!!! | TTTTTTTTTAATCTTAAGCG+TGG | + | chr1.2:64684449-64684468 | MS.gene07369:intron | 20.0% |
! | AAGTAACATTAATGCTTCAT+TGG | + | chr1.2:64683379-64683398 | MS.gene07369:intron | 25.0% |
! | AATTACCATGAAGGAAAATA+TGG | - | chr1.2:64682965-64682984 | None:intergenic | 25.0% |
! | ACGAATGTGGAAAAAAATAT+TGG | + | chr1.2:64685851-64685870 | MS.gene07369:CDS | 25.0% |
! | CTTAACTATGGATTCATTAT+TGG | + | chr1.2:64684180-64684199 | MS.gene07369:CDS | 25.0% |
! | CTTTCATAACAAATGGAAAT+GGG | - | chr1.2:64684317-64684336 | None:intergenic | 25.0% |
! | GAAAAAAATATTGGCAATGA+GGG | + | chr1.2:64685860-64685879 | MS.gene07369:CDS | 25.0% |
! | GAATAGATAAATTACCATGA+AGG | - | chr1.2:64682974-64682993 | None:intergenic | 25.0% |
! | GCAATGAATGAATTCAATTT+AGG | + | chr1.2:64683235-64683254 | MS.gene07369:intron | 25.0% |
! | TCATCATCTTTCATAACAAA+TGG | - | chr1.2:64684324-64684343 | None:intergenic | 25.0% |
! | TCTTTCATAACAAATGGAAA+TGG | - | chr1.2:64684318-64684337 | None:intergenic | 25.0% |
! | TTATGACAAGTAAATGCTTA+TGG | + | chr1.2:64685232-64685251 | MS.gene07369:intron | 25.0% |
! | TTGCTTAAATTATCTTCAGT+CGG | + | chr1.2:64683615-64683634 | MS.gene07369:intron | 25.0% |
!! | ATCAACTGTTTTCAGTTTTA+AGG | + | chr1.2:64683560-64683579 | MS.gene07369:intron | 25.0% |
!! | TTTTAGTCCTGTAATTGTAA+GGG | + | chr1.2:64683678-64683697 | MS.gene07369:intron | 25.0% |
!!! | ATAATTTTGTTGTTTTGCAC+AGG | + | chr1.2:64684050-64684069 | MS.gene07369:intron | 25.0% |
!!! | ATTTTAGTCCTGTAATTGTA+AGG | + | chr1.2:64683677-64683696 | MS.gene07369:intron | 25.0% |
!!! | CTAAAGAAATATTTTGATGG+AGG | - | chr1.2:64683771-64683790 | None:intergenic | 25.0% |
!!! | GTTTGATTTGTTTCATAAAG+GGG | + | chr1.2:64685364-64685383 | MS.gene07369:intron | 25.0% |
AAAATCCTTGACATTAGTGT+TGG | - | chr1.2:64685510-64685529 | None:intergenic | 30.0% | |
AACTTCATGTATCACCATTA+AGG | + | chr1.2:64685915-64685934 | MS.gene07369:CDS | 30.0% | |
AATAGAAGGTTCAAAAGTCA+AGG | - | chr1.2:64685042-64685061 | None:intergenic | 30.0% | |
AATGAGAACTAACCATTAAC+AGG | - | chr1.2:64684746-64684765 | None:intergenic | 30.0% | |
AATTGTTATCAATGTGTGTC+TGG | + | chr1.2:64683992-64684011 | MS.gene07369:intron | 30.0% | |
ACTCTGTTTATATGTGAATC+AGG | + | chr1.2:64684497-64684516 | MS.gene07369:intron | 30.0% | |
AGAAGAAGAAAAAAGCCAAA+AGG | + | chr1.2:64684142-64684161 | MS.gene07369:CDS | 30.0% | |
AGTGGTTGAATAACTGTATT+GGG | + | chr1.2:64684679-64684698 | MS.gene07369:intron | 30.0% | |
ATAGAAGGTTCAAAAGTCAA+GGG | - | chr1.2:64685041-64685060 | None:intergenic | 30.0% | |
ATAGTCATCTGAATTGTTTC+TGG | + | chr1.2:64685000-64685019 | MS.gene07369:intron | 30.0% | |
ATGAATCCATAGTTAAGCTT+AGG | - | chr1.2:64684177-64684196 | None:intergenic | 30.0% | |
ATTCATTATTGGTCAGATTG+TGG | + | chr1.2:64684191-64684210 | MS.gene07369:CDS | 30.0% | |
ATTGAATTCATTCATTGCAC+TGG | - | chr1.2:64683233-64683252 | None:intergenic | 30.0% | |
GACTGAATTGATATTTCTCA+AGG | + | chr1.2:64683919-64683938 | MS.gene07369:intron | 30.0% | |
GGAAAAAAATATTGGCAATG+AGG | + | chr1.2:64685859-64685878 | MS.gene07369:CDS | 30.0% | |
TAAACATGAGATTAAGCACA+AGG | + | chr1.2:64683073-64683092 | MS.gene07369:intron | 30.0% | |
TCAGATGACTATTACACATA+TGG | - | chr1.2:64684992-64685011 | None:intergenic | 30.0% | |
TGAAACGCGACATATAATTT+GGG | + | chr1.2:64683405-64683424 | MS.gene07369:intron | 30.0% | |
TTGAAAATGTGACAGTTTGT+AGG | + | chr1.2:64682850-64682869 | MS.gene07369:intron | 30.0% | |
TTGAAACGCGACATATAATT+TGG | + | chr1.2:64683404-64683423 | MS.gene07369:intron | 30.0% | |
TTTCTTCTTCTTCTTGAAAC+TGG | - | chr1.2:64684133-64684152 | None:intergenic | 30.0% | |
! | AAAACTGAAAACAGTTGATG+CGG | - | chr1.2:64683559-64683578 | None:intergenic | 30.0% |
! | AACACCTTTTATAGCAAAAG+GGG | + | chr1.2:64685892-64685911 | MS.gene07369:CDS | 30.0% |
! | ATGCTTATTTACTAGTTTGG+AGG | - | chr1.2:64683659-64683678 | None:intergenic | 30.0% |
! | ATGTCAAGGATTTTATGCAA+AGG | + | chr1.2:64685516-64685535 | MS.gene07369:CDS | 30.0% |
! | CAACACCTTTTATAGCAAAA+GGG | + | chr1.2:64685891-64685910 | MS.gene07369:CDS | 30.0% |
! | TAGTCATCTGAATTGTTTCT+GGG | + | chr1.2:64685001-64685020 | MS.gene07369:intron | 30.0% |
! | TCAACACCTTTTATAGCAAA+AGG | + | chr1.2:64685890-64685909 | MS.gene07369:CDS | 30.0% |
! | TCCAAAGCGACATATATTTT+GGG | + | chr1.2:64683441-64683460 | MS.gene07369:intron | 30.0% |
! | TGGTTTGAGTCAATTTTCAT+AGG | - | chr1.2:64683196-64683215 | None:intergenic | 30.0% |
! | TTCCAAAGCGACATATATTT+TGG | + | chr1.2:64683440-64683459 | MS.gene07369:intron | 30.0% |
!! | AACCTTTTTGTGTTGATCAA+AGG | - | chr1.2:64685674-64685693 | None:intergenic | 30.0% |
!! | AATTTAGGTAACGGAAATGA+GGG | + | chr1.2:64683250-64683269 | MS.gene07369:intron | 30.0% |
!! | ACCTTTTTGTGTTGATCAAA+GGG | - | chr1.2:64685673-64685692 | None:intergenic | 30.0% |
!! | CAGTTATGTTTTTGTTTGTG+AGG | + | chr1.2:64684079-64684098 | MS.gene07369:CDS | 30.0% |
!! | GATGATGTTTTTACCTGTAA+AGG | - | chr1.2:64682757-64682776 | None:intergenic | 30.0% |
!!! | CTGCTTCTATATTTGTTTTG+TGG | - | chr1.2:64686010-64686029 | None:intergenic | 30.0% |
!!! | TTTGGAGGCTTTTTCAAAAT+AGG | - | chr1.2:64683644-64683663 | None:intergenic | 30.0% |
!!! | TTTTCTTCTCTTGTTTTCAG+TGG | + | chr1.2:64684661-64684680 | MS.gene07369:intron | 30.0% |
!!! | TTTTTTTCCACATTCGTCAA+TGG | - | chr1.2:64685848-64685867 | None:intergenic | 30.0% |
AAAAGCCAACACTAATGTCA+AGG | + | chr1.2:64685502-64685521 | MS.gene07369:CDS | 35.0% | |
AAACACAGTGTACCTTTGAT+CGG | - | chr1.2:64683160-64683179 | None:intergenic | 35.0% | |
AATATTGGCAATGAGGGATT+TGG | + | chr1.2:64685866-64685885 | MS.gene07369:CDS | 35.0% | |
AGAACTGCACAGAAAATCAA+AGG | - | chr1.2:64685325-64685344 | None:intergenic | 35.0% | |
AGAGAACTACCTTTCGTATT+AGG | - | chr1.2:64685177-64685196 | None:intergenic | 35.0% | |
AGCTTGAAACACATATTTCC+AGG | + | chr1.2:64686062-64686081 | MS.gene07369:CDS | 35.0% | |
ATATTGGCAATGAGGGATTT+GGG | + | chr1.2:64685867-64685886 | MS.gene07369:CDS | 35.0% | |
ATCAAATGACTCCAATTCCA+TGG | - | chr1.2:64685436-64685455 | None:intergenic | 35.0% | |
CACTGGATTGTACTTTGAAT+TGG | - | chr1.2:64683216-64683235 | None:intergenic | 35.0% | |
CAGTGGTTGAATAACTGTAT+TGG | + | chr1.2:64684678-64684697 | MS.gene07369:intron | 35.0% | |
CATTGCCAGAATATAGTCAT+AGG | - | chr1.2:64685397-64685416 | None:intergenic | 35.0% | |
CTGCAATTGCGATATTTATC+AGG | + | chr1.2:64684887-64684906 | MS.gene07369:CDS | 35.0% | |
GAATAGAAAAGGAGCTTCAT+AGG | + | chr1.2:64684929-64684948 | MS.gene07369:CDS | 35.0% | |
GATATTTATCAGGTGCTTTG+TGG | + | chr1.2:64684897-64684916 | MS.gene07369:CDS | 35.0% | |
GATGACTATTACACATATGG+TGG | - | chr1.2:64684989-64685008 | None:intergenic | 35.0% | |
GCAATTCCTAAGCTTAACTA+TGG | + | chr1.2:64684168-64684187 | MS.gene07369:CDS | 35.0% | |
TACCATGAAGGAAAATATGG+AGG | - | chr1.2:64682962-64682981 | None:intergenic | 35.0% | |
TATACTATCAAGCACACACT+CGG | - | chr1.2:64684021-64684040 | None:intergenic | 35.0% | |
TCAAAACAAGCTTCTCTGTA+AGG | - | chr1.2:64685595-64685614 | None:intergenic | 35.0% | |
TCAACTTTACGAGTTTCCAA+GGG | - | chr1.2:64685712-64685731 | None:intergenic | 35.0% | |
TCAATCTTGATAGACAACCT+AGG | - | chr1.2:64685632-64685651 | None:intergenic | 35.0% | |
TGTTCAGTTATCAGCAAAGA+TGG | + | chr1.2:64686094-64686113 | MS.gene07369:CDS | 35.0% | |
TTAGTGTTATCTCAGCAGTT+CGG | - | chr1.2:64682939-64682958 | None:intergenic | 35.0% | |
TTCATTAAGACCTCTTCCAT+TGG | + | chr1.2:64685808-64685827 | MS.gene07369:CDS | 35.0% | |
TTTACCTGTAAAGGATGAAG+AGG | - | chr1.2:64682748-64682767 | None:intergenic | 35.0% | |
TTTGTTTCATAAAGGGGATG+AGG | + | chr1.2:64685370-64685389 | MS.gene07369:intron | 35.0% | |
! | AACCTCCATATTTTCCTTCA+TGG | + | chr1.2:64682957-64682976 | MS.gene07369:CDS | 35.0% |
! | AAGGATTTTATGCAAAGGAC+AGG | + | chr1.2:64685521-64685540 | MS.gene07369:CDS | 35.0% |
! | AGCATCTTAAGTTGTTATGC+TGG | - | chr1.2:64683523-64683542 | None:intergenic | 35.0% |
! | ATCTGTTACTGTTAGGCTTT+TGG | + | chr1.2:64684594-64684613 | MS.gene07369:intron | 35.0% |
! | CTTAGGAATTGCATTCCTTT+TGG | - | chr1.2:64684160-64684179 | None:intergenic | 35.0% |
! | CTTTTTGTAGAGTTTCCAAG+AGG | + | chr1.2:64684955-64684974 | MS.gene07369:CDS | 35.0% |
! | GATGATTTTCGTCCTGTTAA+TGG | + | chr1.2:64684731-64684750 | MS.gene07369:CDS | 35.0% |
! | GTGTGTTTCTATACTTTCCT+CGG | + | chr1.2:64682898-64682917 | MS.gene07369:CDS | 35.0% |
! | TAAGGTTTGAGACAGAATGA+AGG | - | chr1.2:64685577-64685596 | None:intergenic | 35.0% |
! | TCCCAAAATATATGTCGCTT+TGG | - | chr1.2:64683445-64683464 | None:intergenic | 35.0% |
! | TTGCACACTTTGTGATTTTG+AGG | + | chr1.2:64684386-64684405 | MS.gene07369:CDS | 35.0% |
!! | AAGCGACATATATTTTGGGA+CGG | + | chr1.2:64683445-64683464 | MS.gene07369:intron | 35.0% |
!! | AAGTTGTTATGCTGGTTTAG+AGG | - | chr1.2:64683515-64683534 | None:intergenic | 35.0% |
!! | AGTTCCCCTTTTGCTATAAA+AGG | - | chr1.2:64685899-64685918 | None:intergenic | 35.0% |
!! | AGTTGTTATGCTGGTTTAGA+GGG | - | chr1.2:64683514-64683533 | None:intergenic | 35.0% |
!! | ATTTAGGTAACGGAAATGAG+GGG | + | chr1.2:64683251-64683270 | MS.gene07369:intron | 35.0% |
!! | CAATTTAGGTAACGGAAATG+AGG | + | chr1.2:64683249-64683268 | MS.gene07369:intron | 35.0% |
!! | CCTTTTTGTGTTGATCAAAG+GGG | - | chr1.2:64685672-64685691 | None:intergenic | 35.0% |
!! | GTTTTTGTTTGTGAGGTGTA+CGG | + | chr1.2:64684086-64684105 | MS.gene07369:CDS | 35.0% |
!!! | AGTTTTGACTTGAAGTTAGC+AGG | + | chr1.2:64686028-64686047 | MS.gene07369:CDS | 35.0% |
AACAGCTCATCATTGAAGGA+GGG | + | chr1.2:64684863-64684882 | MS.gene07369:intron | 40.0% | |
AAGTATAGAAACACACCACC+AGG | - | chr1.2:64682894-64682913 | None:intergenic | 40.0% | |
AATGTGACAGTTTGTAGGCA+TGG | + | chr1.2:64682855-64682874 | MS.gene07369:intron | 40.0% | |
AATGTTACAGCACCAATAGC+AGG | - | chr1.2:64683343-64683362 | None:intergenic | 40.0% | |
ACAAATGGAAATGGGAGAAG+AGG | - | chr1.2:64684309-64684328 | None:intergenic | 40.0% | |
ACTTGTAATCGTTGCGTTGA+AGG | + | chr1.2:64684546-64684565 | MS.gene07369:CDS | 40.0% | |
AGAGAATGAAGCCATGGAAT+TGG | + | chr1.2:64685422-64685441 | MS.gene07369:CDS | 40.0% | |
AGCTTATAGTTCAGCTGCAT+TGG | + | chr1.2:64685126-64685145 | MS.gene07369:CDS | 40.0% | |
ATCTGTGCTAAACCGATCAA+AGG | + | chr1.2:64683145-64683164 | MS.gene07369:intron | 40.0% | |
ATGTGACAGTTTGTAGGCAT+GGG | + | chr1.2:64682856-64682875 | MS.gene07369:intron | 40.0% | |
ATGTTACAGCACCAATAGCA+GGG | - | chr1.2:64683342-64683361 | None:intergenic | 40.0% | |
CAATGCTGTCATCTGATGAA+AGG | - | chr1.2:64685467-64685486 | None:intergenic | 40.0% | |
CATGGGGATTTATAGTTTCC+TGG | + | chr1.2:64682873-64682892 | MS.gene07369:CDS | 40.0% | |
CCCCTTTGATCAACACAAAA+AGG | + | chr1.2:64685669-64685688 | MS.gene07369:CDS | 40.0% | |
CCTGCAGAAAATCTTCTTCT+TGG | - | chr1.2:64685950-64685969 | None:intergenic | 40.0% | |
CGAGTAACCCTTACAATTAC+AGG | - | chr1.2:64683688-64683707 | None:intergenic | 40.0% | |
CTTATAGTTCAGCTGCATTG+GGG | + | chr1.2:64685128-64685147 | MS.gene07369:CDS | 40.0% | |
CTTGGACTTGAAAGCCTTAA+TGG | - | chr1.2:64685932-64685951 | None:intergenic | 40.0% | |
CTTGTAATCGTTGCGTTGAA+GGG | + | chr1.2:64684547-64684566 | MS.gene07369:CDS | 40.0% | |
GAGGACCTATGACTATATTC+TGG | + | chr1.2:64685389-64685408 | MS.gene07369:CDS | 40.0% | |
GCTTATAGTTCAGCTGCATT+GGG | + | chr1.2:64685127-64685146 | MS.gene07369:CDS | 40.0% | |
GGATAAGAGGGGAATAGAAA+AGG | + | chr1.2:64684918-64684937 | MS.gene07369:CDS | 40.0% | |
GGTAGTTCTCTTTCTTGCTT+TGG | + | chr1.2:64685186-64685205 | MS.gene07369:intron | 40.0% | |
GGTCAGTATCTGTTACTGTT+AGG | + | chr1.2:64684587-64684606 | MS.gene07369:intron | 40.0% | |
GTCAACTTTACGAGTTTCCA+AGG | - | chr1.2:64685713-64685732 | None:intergenic | 40.0% | |
GTTCACATAACACATGGTGT+TGG | - | chr1.2:64684846-64684865 | None:intergenic | 40.0% | |
TCACGTTCTCCTAATACGAA+AGG | + | chr1.2:64685165-64685184 | MS.gene07369:CDS | 40.0% | |
TGAAACACATATTTCCAGGC+AGG | + | chr1.2:64686066-64686085 | MS.gene07369:CDS | 40.0% | |
TGAACTTCATGAAATGCTGC+AGG | + | chr1.2:64685084-64685103 | MS.gene07369:intron | 40.0% | |
TGAGCTGTTCACATAACACA+TGG | - | chr1.2:64684852-64684871 | None:intergenic | 40.0% | |
TGTGAACAGCTCATCATTGA+AGG | + | chr1.2:64684859-64684878 | MS.gene07369:intron | 40.0% | |
TTATTGGTCAGATTGTGGTG+AGG | + | chr1.2:64684196-64684215 | MS.gene07369:CDS | 40.0% | |
TTCACGTAAGCATTAACCCT+TGG | + | chr1.2:64685693-64685712 | MS.gene07369:CDS | 40.0% | |
! | AGATTGTGGTGAGGTTTTTC+AGG | + | chr1.2:64684205-64684224 | MS.gene07369:CDS | 40.0% |
! | CCAAGAAGAAGATTTTCTGC+AGG | + | chr1.2:64685947-64685966 | MS.gene07369:CDS | 40.0% |
! | GACAGAATGAAGGCATAAAG+CGG | - | chr1.2:64685567-64685586 | None:intergenic | 40.0% |
! | GATCAAAGGTACACTGTGTT+TGG | + | chr1.2:64683159-64683178 | MS.gene07369:intron | 40.0% |
! | TTTGTGTTGATCAAAGGGGA+AGG | - | chr1.2:64685668-64685687 | None:intergenic | 40.0% |
!! | AAAGGAGCATTTCTGAGATG+GGG | - | chr1.2:64683319-64683338 | None:intergenic | 40.0% |
!! | ACATGGTGTTGGAAACGTTT+TGG | - | chr1.2:64684835-64684854 | None:intergenic | 40.0% |
!! | ATGTCGTCCTCTTTAAGATC+AGG | - | chr1.2:64684360-64684379 | None:intergenic | 40.0% |
!! | GAAAGGAGCATTTCTGAGAT+GGG | - | chr1.2:64683320-64683339 | None:intergenic | 40.0% |
!! | GTTGTTATGCTGGTTTAGAG+GGG | - | chr1.2:64683513-64683532 | None:intergenic | 40.0% |
!! | TGCAAGTAGAGCTTTTTCTC+TGG | - | chr1.2:64685735-64685754 | None:intergenic | 40.0% |
!! | TGTCGTCCTCTTTAAGATCA+GGG | - | chr1.2:64684359-64684378 | None:intergenic | 40.0% |
!! | TTTAGGTAACGGAAATGAGG+GGG | + | chr1.2:64683252-64683271 | MS.gene07369:intron | 40.0% |
!!! | GACATATATTTTGGGACGGA+GGG | + | chr1.2:64683449-64683468 | MS.gene07369:intron | 40.0% |
!!! | GACATTAGTGTTGGCTTTTC+AGG | - | chr1.2:64685501-64685520 | None:intergenic | 40.0% |
AACAGATACTGACCCTGCAA+TGG | - | chr1.2:64684581-64684600 | None:intergenic | 45.0% | |
AACTGAACATAGAACCTGCC+TGG | - | chr1.2:64686083-64686102 | None:intergenic | 45.0% | |
AAGGGTTTGATCACCATTGC+AGG | + | chr1.2:64684565-64684584 | MS.gene07369:CDS | 45.0% | |
AATGAACTGTGCTCCCTCAT+TGG | - | chr1.2:64685794-64685813 | None:intergenic | 45.0% | |
AATGCTCCTTTCCCTGCTAT+TGG | + | chr1.2:64683328-64683347 | MS.gene07369:intron | 45.0% | |
ACGTCCTCTTCATCCTTTAC+AGG | + | chr1.2:64682741-64682760 | MS.gene07369:CDS | 45.0% | |
ACTTGCAGCTGAGAAAGCAA+GGG | + | chr1.2:64685748-64685767 | MS.gene07369:CDS | 45.0% | |
ACTTGTGCACTCGTCTTCAA+CGG | - | chr1.2:64684282-64684301 | None:intergenic | 45.0% | |
AGGGTTTGATCACCATTGCA+GGG | + | chr1.2:64684566-64684585 | MS.gene07369:CDS | 45.0% | |
AGGTGCTTTGTGGATAAGAG+GGG | + | chr1.2:64684907-64684926 | MS.gene07369:CDS | 45.0% | |
ATGCTGCTAGAGAATACCGA+TGG | - | chr1.2:64685977-64685996 | None:intergenic | 45.0% | |
CAGGTGCTTTGTGGATAAGA+GGG | + | chr1.2:64684906-64684925 | MS.gene07369:CDS | 45.0% | |
CTGCACAGAAAATCAAAGGC+TGG | - | chr1.2:64685321-64685340 | None:intergenic | 45.0% | |
CTTCCATTGGAGACAAAACG+CGG | + | chr1.2:64685821-64685840 | MS.gene07369:CDS | 45.0% | |
GAACAGCTCATCATTGAAGG+AGG | + | chr1.2:64684862-64684881 | MS.gene07369:intron | 45.0% | |
GAAGTTAGCAGGTGTGTCTA+GGG | + | chr1.2:64686039-64686058 | MS.gene07369:CDS | 45.0% | |
GAGAGAAGAGAATGAAGCCA+TGG | + | chr1.2:64685416-64685435 | MS.gene07369:CDS | 45.0% | |
GGGGATTTATAGTTTCCTGG+TGG | + | chr1.2:64682876-64682895 | MS.gene07369:CDS | 45.0% | |
GGGTGGAAAAGAAGTTGCTT+AGG | + | chr1.2:64684229-64684248 | MS.gene07369:CDS | 45.0% | |
TACTTGCAGCTGAGAAAGCA+AGG | + | chr1.2:64685747-64685766 | MS.gene07369:CDS | 45.0% | |
TCAGGTGCTTTGTGGATAAG+AGG | + | chr1.2:64684905-64684924 | MS.gene07369:CDS | 45.0% | |
TGAAGTTAGCAGGTGTGTCT+AGG | + | chr1.2:64686038-64686057 | MS.gene07369:CDS | 45.0% | |
TGTCGTCCCTGATCTTAAAG+AGG | + | chr1.2:64684350-64684369 | MS.gene07369:CDS | 45.0% | |
TGTGACAGTTTGTAGGCATG+GGG | + | chr1.2:64682857-64682876 | MS.gene07369:intron | 45.0% | |
! | AATCAAAGGCTGGAGCACTT+TGG | - | chr1.2:64685311-64685330 | None:intergenic | 45.0% |
! | ACTGAAAACAGTTGATGCGG+TGG | - | chr1.2:64683556-64683575 | None:intergenic | 45.0% |
! | ATTTTCTGCAGGCACACCAT+CGG | + | chr1.2:64685958-64685977 | MS.gene07369:CDS | 45.0% |
! | CGTTTTGTCTCCAATGGAAG+AGG | - | chr1.2:64685821-64685840 | None:intergenic | 45.0% |
! | TGAGTTTTCAGAGCTCACCT+AGG | + | chr1.2:64685612-64685631 | MS.gene07369:intron | 45.0% |
!! | AAGGAGCATTTCTGAGATGG+GGG | - | chr1.2:64683318-64683337 | None:intergenic | 45.0% |
!! | GGAAAGGAGCATTTCTGAGA+TGG | - | chr1.2:64683321-64683340 | None:intergenic | 45.0% |
!! | TTGAAACTGGCTCTGTCTGT+AGG | - | chr1.2:64684120-64684139 | None:intergenic | 45.0% |
!!! | CGACATATATTTTGGGACGG+AGG | + | chr1.2:64683448-64683467 | MS.gene07369:intron | 45.0% |
!!! | TGTGGTGAGGTTTTTCAGGA+GGG | + | chr1.2:64684209-64684228 | MS.gene07369:CDS | 45.0% |
!!! | TTGTGGTGAGGTTTTTCAGG+AGG | + | chr1.2:64684208-64684227 | MS.gene07369:CDS | 45.0% |
!!! | ATATTTTTTTTTTTCAAAAA+TGG | + | chr1.2:64683038-64683057 | MS.gene07369:intron | 5.0% |
!!! | ATTATTATTTATTTTTGAAT+TGG | + | chr1.2:64683097-64683116 | MS.gene07369:intron | 5.0% |
!!! | ATTGATATTTTTTAATTTAA+GGG | + | chr1.2:64683897-64683916 | MS.gene07369:intron | 5.0% |
!!! | ATTTTTGAAAAAAAAAAATA+TGG | - | chr1.2:64683039-64683058 | None:intergenic | 5.0% |
ACAGCACCAATAGCAGGGAA+AGG | - | chr1.2:64683337-64683356 | None:intergenic | 50.0% | |
ACTTTCCTCGGACTCTTCCT+CGG | + | chr1.2:64682910-64682929 | MS.gene07369:CDS | 50.0% | |
ATGGTGGCAAGAAGTCCTCT+TGG | - | chr1.2:64684973-64684992 | None:intergenic | 50.0% | |
CACTCGTCTTCAACGGATCA+AGG | - | chr1.2:64684275-64684294 | None:intergenic | 50.0% | |
CAGCTGAGAAAGCAAGGGAA+AGG | + | chr1.2:64685753-64685772 | MS.gene07369:CDS | 50.0% | |
CGTGCGAGAAAGACCAATGA+GGG | + | chr1.2:64685778-64685797 | MS.gene07369:CDS | 50.0% | |
GTTGAAGACGAGTGCACAAG+TGG | + | chr1.2:64684281-64684300 | MS.gene07369:CDS | 50.0% | |
TCGTGCGAGAAAGACCAATG+AGG | + | chr1.2:64685777-64685796 | MS.gene07369:CDS | 50.0% | |
! | AACAGTTGATGCGGTGGCAT+TGG | - | chr1.2:64683550-64683569 | None:intergenic | 50.0% |
! | GCTGGTTTAGAGGGGTTATC+TGG | - | chr1.2:64683505-64683524 | None:intergenic | 50.0% |
ACGCGGACCATTGACGAATG+TGG | + | chr1.2:64685838-64685857 | MS.gene07369:CDS | 55.0% | |
GAAGAGGACGTTGCCAACCA+TGG | - | chr1.2:64682732-64682751 | None:intergenic | 55.0% | |
TCTCAGCAGTTCGGTTTCCG+AGG | - | chr1.2:64682930-64682949 | None:intergenic | 55.0% | |
! | GGTCCGCGTTTTGTCTCCAA+TGG | - | chr1.2:64685827-64685846 | None:intergenic | 55.0% |
!! | AGCATTTCTGAGATGGGGGC+TGG | - | chr1.2:64683314-64683333 | None:intergenic | 55.0% |
!!! | GGTGAGGTTTTTCAGGAGGG+TGG | + | chr1.2:64684212-64684231 | MS.gene07369:CDS | 55.0% |
GGTTTCCGAGGAAGAGTCCG+AGG | - | chr1.2:64682918-64682937 | None:intergenic | 60.0% | |
! | GGGGCTGGTGCAATGTAGCT+CGG | + | chr1.2:64683271-64683290 | MS.gene07369:intron | 60.0% |
!! | GGTAACGGAAATGAGGGGGC+TGG | + | chr1.2:64683256-64683275 | MS.gene07369:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 64682721 | 64686141 | 64682721 | ID=MS.gene07369 |
chr1.2 | mRNA | 64682721 | 64686141 | 64682721 | ID=MS.gene07369.t1;Parent=MS.gene07369 |
chr1.2 | exon | 64682721 | 64682762 | 64682721 | ID=MS.gene07369.t1.exon1;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64682721 | 64682762 | 64682721 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64682865 | 64682978 | 64682865 | ID=MS.gene07369.t1.exon2;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64682865 | 64682978 | 64682865 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64684072 | 64684407 | 64684072 | ID=MS.gene07369.t1.exon3;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64684072 | 64684407 | 64684072 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64684519 | 64684587 | 64684519 | ID=MS.gene07369.t1.exon4;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64684519 | 64684587 | 64684519 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64684681 | 64684752 | 64684681 | ID=MS.gene07369.t1.exon5;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64684681 | 64684752 | 64684681 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64684868 | 64684996 | 64684868 | ID=MS.gene07369.t1.exon6;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64684868 | 64684996 | 64684868 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64685106 | 64685186 | 64685106 | ID=MS.gene07369.t1.exon7;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64685106 | 64685186 | 64685106 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64685384 | 64685542 | 64685384 | ID=MS.gene07369.t1.exon8;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64685384 | 64685542 | 64685384 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
chr1.2 | exon | 64685623 | 64686141 | 64685623 | ID=MS.gene07369.t1.exon9;Parent=MS.gene07369.t1 |
chr1.2 | CDS | 64685623 | 64686141 | 64685623 | ID=cds.MS.gene07369.t1;Parent=MS.gene07369.t1 |
Gene Sequence |
Protein sequence |