Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057004.t1 | XP_024631663.1 | 98.2 | 338 | 6 | 0 | 76 | 413 | 69 | 406 | 1.80E-140 | 509.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057004.t1 | A0A396JDB1 | 98.2 | 338 | 6 | 0 | 76 | 413 | 69 | 406 | 1.3e-140 | 509.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene057004 | 0.800893 | 1.16E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene057004 | 0.814924 | 1.20E-51 | -1.69E-46 |
| MS.gene050297 | MS.gene057004 | 0.836604 | 8.49E-57 | -1.69E-46 |
| MS.gene050310 | MS.gene057004 | 0.83017 | 3.41E-55 | -1.69E-46 |
| MS.gene050648 | MS.gene057004 | 0.806287 | 8.85E-50 | -1.69E-46 |
| MS.gene051094 | MS.gene057004 | 0.823344 | 1.46E-53 | -1.69E-46 |
| MS.gene055764 | MS.gene057004 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene058197 | 0.838815 | 2.30E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene058198 | 0.836533 | 8.85E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene059300 | 0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene057004 | MS.gene06057 | 0.840891 | 6.62E-58 | -1.69E-46 |
| MS.gene057004 | MS.gene061805 | 0.832638 | 8.43E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene064082 | 0.808125 | 3.61E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene064161 | 0.848825 | 4.79E-60 | -1.69E-46 |
| MS.gene057004 | MS.gene066010 | 0.806067 | 9.85E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene066031 | 0.830577 | 2.71E-55 | -1.69E-46 |
| MS.gene057004 | MS.gene068548 | 0.82905 | 6.39E-55 | -1.69E-46 |
| MS.gene057004 | MS.gene068607 | 0.815509 | 8.92E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene069090 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene069140 | 0.809374 | 1.95E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene070885 | 0.850958 | 1.21E-60 | -1.69E-46 |
| MS.gene057004 | MS.gene071651 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene072402 | 0.82475 | 6.82E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene072719 | 0.835412 | 1.70E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene073326 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene07369 | 0.820974 | 5.17E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene074367 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene08815 | 0.805138 | 1.54E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene08971 | 0.805138 | 1.54E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene09275 | 0.83345 | 5.30E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene20913 | 0.804847 | 1.77E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene21133 | 0.819928 | 8.98E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene21144 | 0.808947 | 2.41E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene21320 | 0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene23980 | 0.812659 | 3.79E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene24527 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene24682 | 0.807439 | 5.05E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene24699 | 0.847125 | 1.41E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene24735 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene24982 | 0.855078 | 8.03E-62 | -1.69E-46 |
| MS.gene057004 | MS.gene25945 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene26224 | 0.842199 | 2.99E-58 | -1.69E-46 |
| MS.gene057004 | MS.gene26801 | 0.876616 | 1.21E-68 | -1.69E-46 |
| MS.gene057004 | MS.gene27222 | 0.810298 | 1.24E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene28050 | 0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene057004 | MS.gene30854 | 0.829689 | 4.47E-55 | -1.69E-46 |
| MS.gene057004 | MS.gene32703 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene33123 | 0.81989 | 9.16E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene35715 | 0.84691 | 1.61E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene36265 | 0.812383 | 4.36E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene38688 | 0.81976 | 9.80E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene38693 | 0.804729 | 1.88E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene38829 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene40409 | 0.815255 | 1.02E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene41651 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene42665 | 0.809038 | 2.30E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene47498 | 0.815679 | 8.17E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene47899 | 0.821122 | 4.77E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene51091 | 0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene51426 | 0.816667 | 4.91E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene52975 | 0.835155 | 1.98E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene52996 | 0.802731 | 4.88E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene55782 | 0.846208 | 2.51E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene57320 | 0.827509 | 1.50E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene57428 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene57665 | 0.820577 | 6.37E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene57666 | 0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene57701 | 0.822062 | 2.90E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene58772 | 0.824518 | 7.73E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene58836 | 0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene60118 | 0.809491 | 1.84E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene63853 | 0.841215 | 5.44E-58 | -1.69E-46 |
| MS.gene057004 | MS.gene64763 | 0.858901 | 5.99E-63 | -1.69E-46 |
| MS.gene057004 | MS.gene65451 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene66156 | 0.811725 | 6.06E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene66158 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene66159 | 0.835317 | 1.80E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene66287 | 0.80663 | 7.49E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene67223 | 0.824371 | 8.37E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene68060 | 0.812184 | 4.82E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene68107 | 0.804301 | 2.31E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene68418 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene68611 | 0.844646 | 6.65E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene70896 | 0.813854 | 2.07E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene70898 | 0.837635 | 4.63E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene71419 | 0.835875 | 1.30E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene71698 | 0.814271 | 1.68E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene75670 | 0.800963 | 1.13E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene76156 | 0.840202 | 1.00E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene79784 | 0.801559 | 8.51E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene80180 | 0.80079 | 1.22E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene80183 | 0.805605 | 1.23E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene81409 | 0.83641 | 9.51E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene81491 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene83963 | 0.809116 | 2.22E-50 | -1.69E-46 |
| MS.gene057004 | MS.gene84730 | 0.825487 | 4.56E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene84863 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene89081 | 0.847802 | 9.18E-60 | -1.69E-46 |
| MS.gene057004 | MS.gene89565 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene92578 | 0.814081 | 1.85E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene92710 | 0.826211 | 3.07E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene92988 | 0.845868 | 3.10E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene99093 | 0.848083 | 7.68E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057004.t1 | MTR_2g099780 | 95.377 | 411 | 12 | 2 | 1 | 411 | 1 | 404 | 0.0 | 798 |
| MS.gene057004.t1 | MTR_8g017570 | 53.394 | 442 | 164 | 12 | 1 | 410 | 1 | 432 | 1.30e-110 | 332 |
| MS.gene057004.t1 | MTR_3g104570 | 46.501 | 443 | 185 | 14 | 1 | 402 | 1 | 432 | 4.02e-84 | 264 |
| MS.gene057004.t1 | MTR_4g050480 | 42.279 | 272 | 134 | 6 | 1 | 260 | 1 | 261 | 2.66e-39 | 146 |
| MS.gene057004.t1 | MTR_4g050480 | 42.279 | 272 | 135 | 5 | 1 | 260 | 1 | 262 | 3.60e-39 | 145 |
| MS.gene057004.t1 | MTR_6g033415 | 36.304 | 303 | 154 | 7 | 83 | 356 | 105 | 397 | 2.78e-29 | 118 |
| MS.gene057004.t1 | MTR_8g024540 | 41.451 | 193 | 85 | 7 | 83 | 260 | 125 | 304 | 1.36e-28 | 117 |
| MS.gene057004.t1 | MTR_1g095740 | 37.989 | 179 | 99 | 5 | 84 | 259 | 140 | 309 | 3.82e-27 | 113 |
| MS.gene057004.t1 | MTR_1g066800 | 39.896 | 193 | 98 | 7 | 62 | 252 | 99 | 275 | 8.44e-27 | 112 |
| MS.gene057004.t1 | MTR_1g066800 | 39.896 | 193 | 98 | 7 | 62 | 252 | 104 | 280 | 1.08e-26 | 111 |
| MS.gene057004.t1 | MTR_7g100790 | 31.579 | 342 | 163 | 10 | 59 | 349 | 88 | 409 | 6.64e-26 | 109 |
| MS.gene057004.t1 | MTR_1g103070 | 45.217 | 115 | 50 | 2 | 84 | 185 | 135 | 249 | 9.38e-23 | 100 |
| MS.gene057004.t1 | MTR_2g078210 | 31.455 | 213 | 127 | 5 | 50 | 259 | 42 | 238 | 7.35e-22 | 95.9 |
| MS.gene057004.t1 | MTR_0047s0040 | 38.060 | 134 | 74 | 3 | 84 | 211 | 100 | 230 | 2.42e-21 | 95.9 |
| MS.gene057004.t1 | MTR_2g078210 | 34.659 | 176 | 99 | 4 | 87 | 259 | 16 | 178 | 3.37e-21 | 92.8 |
| MS.gene057004.t1 | MTR_2g015370 | 34.270 | 178 | 105 | 3 | 87 | 264 | 65 | 230 | 8.14e-21 | 92.4 |
| MS.gene057004.t1 | MTR_8g014580 | 31.863 | 204 | 74 | 4 | 1 | 151 | 1 | 192 | 7.64e-20 | 91.3 |
| MS.gene057004.t1 | MTR_4g102840 | 38.667 | 150 | 85 | 2 | 1 | 145 | 1 | 148 | 1.50e-19 | 90.5 |
| MS.gene057004.t1 | MTR_3g020990 | 41.593 | 113 | 58 | 2 | 98 | 209 | 103 | 208 | 1.99e-19 | 87.4 |
| MS.gene057004.t1 | MTR_1g007920 | 32.867 | 286 | 169 | 7 | 83 | 348 | 120 | 402 | 2.38e-19 | 90.1 |
| MS.gene057004.t1 | MTR_1g007920 | 32.867 | 286 | 169 | 7 | 83 | 348 | 95 | 377 | 2.42e-19 | 90.1 |
| MS.gene057004.t1 | MTR_4g108140 | 35.393 | 178 | 92 | 5 | 1 | 159 | 1 | 174 | 3.32e-19 | 90.1 |
| MS.gene057004.t1 | MTR_4g108140 | 34.659 | 176 | 95 | 4 | 1 | 159 | 1 | 173 | 1.59e-18 | 88.2 |
| MS.gene057004.t1 | MTR_1g041430 | 34.667 | 225 | 105 | 6 | 1 | 183 | 1 | 225 | 1.88e-18 | 87.4 |
| MS.gene057004.t1 | MTR_3g091560 | 38.596 | 171 | 91 | 4 | 85 | 251 | 112 | 272 | 2.68e-18 | 86.7 |
| MS.gene057004.t1 | MTR_8g102400 | 38.636 | 176 | 81 | 5 | 1 | 149 | 1 | 176 | 2.70e-18 | 86.7 |
| MS.gene057004.t1 | MTR_2g100740 | 34.031 | 191 | 98 | 6 | 1 | 166 | 1 | 188 | 2.14e-17 | 83.6 |
| MS.gene057004.t1 | MTR_8g074730 | 53.623 | 69 | 32 | 0 | 80 | 148 | 66 | 134 | 3.04e-17 | 78.6 |
| MS.gene057004.t1 | MTR_4g087420 | 31.818 | 154 | 88 | 3 | 72 | 213 | 134 | 282 | 4.49e-17 | 83.6 |
| MS.gene057004.t1 | MTR_0019s0070 | 62.903 | 62 | 23 | 0 | 87 | 148 | 119 | 180 | 8.80e-17 | 82.4 |
| MS.gene057004.t1 | MTR_1g051810 | 26.733 | 303 | 169 | 11 | 87 | 376 | 107 | 369 | 2.77e-16 | 80.1 |
| MS.gene057004.t1 | MTR_1g101330 | 56.061 | 66 | 29 | 0 | 80 | 145 | 110 | 175 | 4.12e-16 | 80.1 |
| MS.gene057004.t1 | MTR_7g114870 | 31.285 | 179 | 92 | 4 | 1 | 153 | 1 | 174 | 6.35e-16 | 79.3 |
| MS.gene057004.t1 | MTR_7g114700 | 50.000 | 66 | 33 | 0 | 84 | 149 | 134 | 199 | 3.28e-15 | 77.4 |
| MS.gene057004.t1 | MTR_5g038620 | 38.614 | 101 | 62 | 0 | 63 | 163 | 97 | 197 | 1.76e-13 | 72.8 |
| MS.gene057004.t1 | MTR_1g023760 | 50.746 | 67 | 33 | 0 | 85 | 151 | 124 | 190 | 7.72e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057004.t1 | AT1G72670 | 47.170 | 424 | 166 | 17 | 1 | 395 | 1 | 395 | 3.34e-92 | 284 |
| MS.gene057004.t1 | AT2G26180 | 47.619 | 420 | 173 | 13 | 1 | 392 | 1 | 401 | 1.28e-82 | 259 |
| MS.gene057004.t1 | AT1G17480 | 40.957 | 376 | 150 | 13 | 1 | 346 | 1 | 334 | 3.51e-62 | 205 |
| MS.gene057004.t1 | AT5G03040 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.28e-33 | 129 |
| MS.gene057004.t1 | AT5G03040 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.28e-33 | 129 |
| MS.gene057004.t1 | AT5G03040 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.28e-33 | 129 |
| MS.gene057004.t1 | AT3G22190 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 5.66e-32 | 125 |
| MS.gene057004.t1 | AT3G22190 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 5.66e-32 | 125 |
| MS.gene057004.t1 | AT3G22190 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 5.66e-32 | 125 |
| MS.gene057004.t1 | AT3G22190 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 5.66e-32 | 125 |
| MS.gene057004.t1 | AT1G01110 | 36.715 | 207 | 108 | 5 | 75 | 267 | 111 | 308 | 1.86e-27 | 114 |
| MS.gene057004.t1 | AT4G00820 | 38.095 | 189 | 89 | 5 | 83 | 255 | 130 | 306 | 3.81e-26 | 110 |
| MS.gene057004.t1 | AT3G52290 | 37.572 | 173 | 97 | 4 | 84 | 255 | 107 | 269 | 4.82e-25 | 106 |
| MS.gene057004.t1 | AT3G49260 | 29.553 | 291 | 157 | 10 | 87 | 348 | 122 | 393 | 9.91e-25 | 106 |
| MS.gene057004.t1 | AT3G49260 | 29.553 | 291 | 156 | 11 | 87 | 348 | 122 | 392 | 1.39e-24 | 105 |
| MS.gene057004.t1 | AT3G49260 | 29.553 | 291 | 156 | 11 | 87 | 348 | 122 | 392 | 1.39e-24 | 105 |
| MS.gene057004.t1 | AT3G49260 | 29.553 | 291 | 156 | 11 | 87 | 348 | 122 | 392 | 1.39e-24 | 105 |
| MS.gene057004.t1 | AT3G09710 | 37.017 | 181 | 99 | 6 | 83 | 260 | 106 | 274 | 1.83e-24 | 105 |
| MS.gene057004.t1 | AT3G09710 | 34.896 | 192 | 102 | 5 | 83 | 260 | 106 | 288 | 5.22e-24 | 103 |
| MS.gene057004.t1 | AT4G10640 | 28.796 | 382 | 193 | 12 | 7 | 349 | 18 | 359 | 7.59e-24 | 103 |
| MS.gene057004.t1 | AT4G14750 | 28.826 | 281 | 162 | 8 | 1 | 253 | 1 | 271 | 1.64e-23 | 101 |
| MS.gene057004.t1 | AT4G14750 | 28.826 | 281 | 162 | 8 | 1 | 253 | 60 | 330 | 3.13e-23 | 101 |
| MS.gene057004.t1 | AT4G14750 | 28.826 | 281 | 162 | 8 | 1 | 253 | 60 | 330 | 3.31e-23 | 101 |
| MS.gene057004.t1 | AT3G59690 | 37.324 | 142 | 75 | 3 | 76 | 213 | 161 | 292 | 8.06e-21 | 94.7 |
| MS.gene057004.t1 | AT3G59690 | 37.324 | 142 | 75 | 3 | 76 | 213 | 161 | 292 | 8.06e-21 | 94.7 |
| MS.gene057004.t1 | AT3G15050 | 31.429 | 210 | 119 | 5 | 87 | 287 | 52 | 245 | 1.50e-20 | 90.9 |
| MS.gene057004.t1 | AT2G26410 | 34.054 | 185 | 103 | 5 | 83 | 260 | 146 | 318 | 5.24e-20 | 92.4 |
| MS.gene057004.t1 | AT2G26410 | 34.054 | 185 | 103 | 5 | 83 | 260 | 146 | 318 | 5.24e-20 | 92.4 |
| MS.gene057004.t1 | AT2G33990 | 31.818 | 176 | 109 | 3 | 84 | 259 | 46 | 210 | 7.12e-19 | 86.3 |
| MS.gene057004.t1 | AT1G18840 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 3.87e-18 | 87.0 |
| MS.gene057004.t1 | AT1G18840 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 3.87e-18 | 87.0 |
| MS.gene057004.t1 | AT1G18840 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 3.87e-18 | 87.0 |
| MS.gene057004.t1 | AT4G23060 | 58.108 | 74 | 31 | 0 | 85 | 158 | 167 | 240 | 5.17e-18 | 86.3 |
| MS.gene057004.t1 | AT5G07240 | 29.252 | 294 | 138 | 11 | 84 | 367 | 104 | 337 | 2.95e-17 | 83.6 |
| MS.gene057004.t1 | AT4G29150 | 44.545 | 110 | 53 | 2 | 83 | 184 | 129 | 238 | 3.44e-17 | 83.2 |
| MS.gene057004.t1 | AT5G13460 | 36.552 | 145 | 71 | 4 | 79 | 211 | 103 | 238 | 5.10e-17 | 83.2 |
| MS.gene057004.t1 | AT5G07240 | 28.716 | 296 | 137 | 11 | 84 | 367 | 150 | 383 | 5.33e-17 | 83.2 |
| MS.gene057004.t1 | AT3G51380 | 57.576 | 66 | 28 | 0 | 83 | 148 | 35 | 100 | 9.49e-17 | 75.9 |
| MS.gene057004.t1 | AT3G16490 | 44.565 | 92 | 49 | 1 | 84 | 173 | 106 | 197 | 1.10e-16 | 81.6 |
| MS.gene057004.t1 | AT1G51960 | 49.333 | 75 | 37 | 1 | 78 | 151 | 92 | 166 | 1.57e-16 | 80.9 |
| MS.gene057004.t1 | AT1G74690 | 34.392 | 189 | 88 | 6 | 1 | 157 | 1 | 185 | 1.08e-15 | 79.3 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.33e-15 | 78.6 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.33e-15 | 78.6 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.33e-15 | 78.6 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.53e-15 | 78.2 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.53e-15 | 78.2 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 2.53e-15 | 78.2 |
| MS.gene057004.t1 | AT1G14380 | 36.196 | 163 | 89 | 5 | 1 | 151 | 1 | 160 | 3.27e-15 | 77.8 |
| MS.gene057004.t1 | AT2G43680 | 33.099 | 142 | 88 | 4 | 70 | 211 | 311 | 445 | 1.99e-14 | 75.9 |
| MS.gene057004.t1 | AT2G43680 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 2.00e-14 | 75.9 |
| MS.gene057004.t1 | AT2G43680 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 2.00e-14 | 75.9 |
| MS.gene057004.t1 | AT2G43680 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 2.00e-14 | 75.9 |
| MS.gene057004.t1 | AT2G43680 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 2.00e-14 | 75.9 |
| MS.gene057004.t1 | AT5G03960 | 38.060 | 134 | 80 | 2 | 87 | 217 | 110 | 243 | 2.22e-14 | 74.7 |
| MS.gene057004.t1 | AT5G03960 | 38.060 | 134 | 80 | 2 | 87 | 217 | 110 | 243 | 2.22e-14 | 74.7 |
| MS.gene057004.t1 | AT5G03960 | 37.879 | 132 | 79 | 2 | 87 | 215 | 109 | 240 | 2.33e-14 | 74.7 |
| MS.gene057004.t1 | AT1G19870 | 35.338 | 133 | 68 | 3 | 63 | 179 | 177 | 307 | 6.14e-14 | 74.3 |
| MS.gene057004.t1 | AT1G19870 | 38.938 | 113 | 56 | 2 | 78 | 179 | 14 | 124 | 1.11e-13 | 73.2 |
| MS.gene057004.t1 | AT3G49380 | 36.364 | 121 | 65 | 3 | 27 | 141 | 52 | 166 | 1.38e-13 | 72.0 |
| MS.gene057004.t1 | AT5G62070 | 64.151 | 53 | 19 | 0 | 87 | 139 | 119 | 171 | 4.73e-13 | 70.9 |
Find 80 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCCTTCAGTTAATTTA+TGG | 0.180664 | 2.1:+4822289 | MS.gene057004:CDS |
| CAATGGGTGTTTCTGGAAAA+TGG | 0.187083 | 2.1:+4819939 | None:intergenic |
| TGCTGCACTGCTTTGCCTTC+TGG | 0.231347 | 2.1:-4821391 | None:intergenic |
| TGATAATAACTTGCCCTTAG+AGG | 0.285753 | 2.1:-4822330 | None:intergenic |
| CTAAAGATTTCATCCTTATC+AGG | 0.290356 | 2.1:+4820251 | MS.gene057004:CDS |
| TCACTCTTCCTGCTTGAGAT+TGG | 0.302121 | 2.1:-4821913 | None:intergenic |
| TTAACTTCATCTGCAGTTCC+AGG | 0.344133 | 2.1:-4821601 | None:intergenic |
| GCAAGCTCTGGTTAGGGTTC+AGG | 0.355190 | 2.1:+4821336 | MS.gene057004:CDS |
| TCTGTTGCTTCTGGCATAGA+TGG | 0.359986 | 2.1:-4822090 | None:intergenic |
| AACAAGCAGCTGTTACTCTA+AGG | 0.370485 | 2.1:+4821308 | MS.gene057004:CDS |
| TTATCAACTTCATGTACATC+TGG | 0.371891 | 2.1:+4822063 | MS.gene057004:CDS |
| GCTATCATCATTCATGTATT+CGG | 0.376299 | 2.1:-4822037 | None:intergenic |
| CTGATAAGGATGAAATCTTT+AGG | 0.380880 | 2.1:-4820250 | None:intergenic |
| GTAATAGTACTAAGAAGAAA+TGG | 0.387683 | 2.1:+4820092 | MS.gene057004:CDS |
| ATGGGCTGCTATCCGCATTC+AGG | 0.390080 | 2.1:+4820279 | MS.gene057004:CDS |
| AGGCTAAGCTCAAAACTTAC+AGG | 0.390491 | 2.1:+4822163 | MS.gene057004:CDS |
| GGTGTATGCAAGCTCTGGTT+AGG | 0.390529 | 2.1:+4821329 | MS.gene057004:CDS |
| ATCGTTGTGCAACACCTCTA+AGG | 0.396953 | 2.1:+4822316 | MS.gene057004:CDS |
| CAAGGATGGTGTGAAATTCC+TGG | 0.403362 | 2.1:+4821583 | MS.gene057004:CDS |
| GATAATAGTATAAACAGTTC+TGG | 0.410910 | 2.1:+4822264 | MS.gene057004:CDS |
| TTCCTTCTTGATTGAAAAGT+AGG | 0.412386 | 2.1:-4821946 | None:intergenic |
| CATTGCTCTATCCCTCTTGA+TGG | 0.414300 | 2.1:-4821653 | None:intergenic |
| TTCCTAAGCTCTTGTTGTCA+TGG | 0.417603 | 2.1:-4821840 | None:intergenic |
| AGCACCACCAGTCTTCTTGA+TGG | 0.424110 | 2.1:-4820161 | None:intergenic |
| AGTTATTATCAAAATCGATA+TGG | 0.428695 | 2.1:+4822342 | MS.gene057004:CDS |
| CAGCCCATTCCTGCCTGATA+AGG | 0.431812 | 2.1:-4820264 | None:intergenic |
| CATCCTTATCAGGCAGGAAT+GGG | 0.450099 | 2.1:+4820261 | MS.gene057004:CDS |
| AAGAGCTTTGAGAGCATTGA+GGG | 0.454446 | 2.1:+4821240 | MS.gene057004:CDS |
| CTAAGAAGAAATGGAAGCTA+TGG | 0.454548 | 2.1:+4820101 | MS.gene057004:CDS |
| TCATCCTTATCAGGCAGGAA+TGG | 0.473411 | 2.1:+4820260 | MS.gene057004:CDS |
| TTCCAATAAGAAAACCGATC+AGG | 0.485410 | 2.1:+4819976 | MS.gene057004:CDS |
| AGACTGCAAGCAATATTTAG+AGG | 0.495590 | 2.1:+4821271 | MS.gene057004:CDS |
| GAAATAGCTTGTTAGAGCGC+TGG | 0.496586 | 2.1:+4821860 | MS.gene057004:CDS |
| AGCAGCTGCAGTATCGGTAA+TGG | 0.501538 | 2.1:-4820203 | None:intergenic |
| TGCAAGCAATATTTAGAGGC+AGG | 0.511357 | 2.1:+4821275 | MS.gene057004:CDS |
| TCTAAGGTGTATGCAAGCTC+TGG | 0.513287 | 2.1:+4821324 | MS.gene057004:CDS |
| AGATTTCATCCTTATCAGGC+AGG | 0.519223 | 2.1:+4820255 | MS.gene057004:CDS |
| AGCAACAGCAGCTGCAGTAT+CGG | 0.521579 | 2.1:-4820209 | None:intergenic |
| GTGTATGCAAGCTCTGGTTA+GGG | 0.521748 | 2.1:+4821330 | MS.gene057004:CDS |
| GTTATTATTATCAGCAAGGA+TGG | 0.522365 | 2.1:+4821569 | MS.gene057004:intron |
| GGCAAGAAGGTGCCATCAAG+AGG | 0.522656 | 2.1:+4821641 | MS.gene057004:CDS |
| TGATTGTAAATTTACCTGAT+CGG | 0.522844 | 2.1:-4819990 | None:intergenic |
| TGGCAAACAAACCATGTCCA+TGG | 0.529332 | 2.1:+4821884 | MS.gene057004:CDS |
| TCTTCAACCATCAAGAAGAC+TGG | 0.529711 | 2.1:+4820154 | MS.gene057004:CDS |
| CCCTTCAGTTAATTTATGGA+AGG | 0.533849 | 2.1:+4822293 | MS.gene057004:CDS |
| GAGCTTAAAGTCGAAGATGA+TGG | 0.534371 | 2.1:-4822015 | None:intergenic |
| TTCAGGCACGTGTGAGAGCT+AGG | 0.537833 | 2.1:+4821353 | MS.gene057004:CDS |
| AACCATGACAACAAGAGCTT+AGG | 0.537945 | 2.1:+4821838 | MS.gene057004:CDS |
| AAGCTAAGAATGAGGCAAGA+AGG | 0.538231 | 2.1:+4821628 | MS.gene057004:CDS |
| TCAAATTCATGTAGCTAGGT+AGG | 0.539947 | 2.1:-4822128 | None:intergenic |
| TCCTTCCATAAATTAACTGA+AGG | 0.545088 | 2.1:-4822294 | None:intergenic |
| ATTGGACTCTCCCATGGACA+TGG | 0.548204 | 2.1:-4821895 | None:intergenic |
| CTATGGAAATCTTCTTCAGA+AGG | 0.549435 | 2.1:+4820118 | MS.gene057004:CDS |
| CAGAATCAGCATGGTTGCGA+TGG | 0.549893 | 2.1:-4821426 | None:intergenic |
| ATTATCAAAATCGATATGGC+AGG | 0.555854 | 2.1:+4822346 | MS.gene057004:CDS |
| TCGTTGTGCAACACCTCTAA+GGG | 0.556401 | 2.1:+4822317 | MS.gene057004:CDS |
| CTTGAGATTGGACTCTCCCA+TGG | 0.558321 | 2.1:-4821901 | None:intergenic |
| AAAAGAAATAGTTACCAAGA+AGG | 0.563052 | 2.1:-4820314 | None:intergenic |
| GAGTTCGAAGAGACTCGTAA+TGG | 0.563998 | 2.1:+4822197 | MS.gene057004:CDS |
| TTTGAGAGCATTGAGGGCAG+TGG | 0.564489 | 2.1:+4821246 | MS.gene057004:CDS |
| GAAGAGCTTTGAGAGCATTG+AGG | 0.569321 | 2.1:+4821239 | MS.gene057004:CDS |
| CCTTCCATAAATTAACTGAA+GGG | 0.587260 | 2.1:-4822293 | None:intergenic |
| TCTGTCAAATTCATGTAGCT+AGG | 0.592487 | 2.1:-4822132 | None:intergenic |
| GAATTTGACAGAATCAACTA+AGG | 0.594832 | 2.1:+4822143 | MS.gene057004:CDS |
| GAAGGAATGGTGTGACAACA+AGG | 0.595005 | 2.1:+4821962 | MS.gene057004:CDS |
| GGGAGAGTCCAATCTCAAGC+AGG | 0.595864 | 2.1:+4821905 | MS.gene057004:CDS |
| GGCAAACAAACCATGTCCAT+GGG | 0.598464 | 2.1:+4821885 | MS.gene057004:CDS |
| TTAAAGCAAAGCTAAGAATG+AGG | 0.599503 | 2.1:+4821620 | MS.gene057004:CDS |
| ATCTATGCCAGAAGCAACAG+AGG | 0.608408 | 2.1:+4822092 | MS.gene057004:CDS |
| TATGGAAATCTTCTTCAGAA+GGG | 0.610798 | 2.1:+4820119 | MS.gene057004:CDS |
| TGATTCTGTTAAGCTTGTAG+AGG | 0.611493 | 2.1:+4821441 | MS.gene057004:CDS |
| CATCAAGAGGGATAGAGCAA+TGG | 0.627816 | 2.1:+4821654 | MS.gene057004:CDS |
| TAGCTTGTTAGAGCGCTGGA+TGG | 0.632949 | 2.1:+4821864 | MS.gene057004:CDS |
| TCAACACTTAATTACCTGTG+TGG | 0.634403 | 2.1:-4821689 | None:intergenic |
| GCAAGAAGGTGCCATCAAGA+GGG | 0.646053 | 2.1:+4821642 | MS.gene057004:CDS |
| GTGTGAGAGCTAGGAATGTG+AGG | 0.652883 | 2.1:+4821362 | MS.gene057004:CDS |
| CAAGCTTAACAGAATCAGCA+TGG | 0.655634 | 2.1:-4821435 | None:intergenic |
| GGCATACTCTCTATCCACAC+AGG | 0.672618 | 2.1:+4821675 | MS.gene057004:CDS |
| TCAACCATCAAGAAGACTGG+TGG | 0.675787 | 2.1:+4820157 | MS.gene057004:CDS |
| AATGTGAGGAAATCTCCAGA+AGG | 0.698682 | 2.1:+4821376 | MS.gene057004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAAATATGATAATATA+AGG | - | chr2.1:4820841-4820860 | None:intergenic | 10.0% |
| !! | AAAAGAGAAAGAAAAAATAA+AGG | - | chr2.1:4820948-4820967 | None:intergenic | 15.0% |
| !! | AAAGAGAAAGAAAAAATAAA+GGG | - | chr2.1:4820947-4820966 | None:intergenic | 15.0% |
| !! | ATTACATAATATTCTCTAAA+TGG | + | chr2.1:4821492-4821511 | MS.gene057004:intron | 15.0% |
| !! | TAAAAAGTTGAATTTCAATT+AGG | - | chr2.1:4820895-4820914 | None:intergenic | 15.0% |
| !!! | ATTCAAATTCAATTTTTTTG+AGG | - | chr2.1:4820520-4820539 | None:intergenic | 15.0% |
| !!! | TGTATTTTAAAAAGAAATAG+AGG | - | chr2.1:4821209-4821228 | None:intergenic | 15.0% |
| !!! | TTAATTAGTTTATCTTATGA+TGG | + | chr2.1:4820815-4820834 | MS.gene057004:intron | 15.0% |
| !!! | TTATTTTTTCTTTCTCTTTT+TGG | + | chr2.1:4820948-4820967 | MS.gene057004:intron | 15.0% |
| !!! | TTCTTTTTAAAATACATTGA+AGG | + | chr2.1:4821213-4821232 | MS.gene057004:intron | 15.0% |
| !! | AAGAGAAAGAAAAAATAAAG+GGG | - | chr2.1:4820946-4820965 | None:intergenic | 20.0% |
| !! | AGTTATTATCAAAATCGATA+TGG | + | chr2.1:4822342-4822361 | MS.gene057004:CDS | 20.0% |
| !! | ATTAACACAACAACAAAAAA+AGG | - | chr2.1:4820032-4820051 | None:intergenic | 20.0% |
| !! | TATAGTATATGCTAACATAA+GGG | + | chr2.1:4821534-4821553 | MS.gene057004:intron | 20.0% |
| !! | TGCAATAAATCCTAAAAAAA+TGG | - | chr2.1:4821090-4821109 | None:intergenic | 20.0% |
| !! | TTAACACAACAACAAAAAAA+GGG | - | chr2.1:4820031-4820050 | None:intergenic | 20.0% |
| !! | TTATAGTATATGCTAACATA+AGG | + | chr2.1:4821533-4821552 | MS.gene057004:intron | 20.0% |
| !!! | AAATTCAATTTTTTTGAGGA+AGG | - | chr2.1:4820516-4820535 | None:intergenic | 20.0% |
| ! | AAAAAAAAAGTAACCAAGAG+TGG | - | chr2.1:4821123-4821142 | None:intergenic | 25.0% |
| ! | AAAAGAAATAGTTACCAAGA+AGG | - | chr2.1:4820317-4820336 | None:intergenic | 25.0% |
| ! | AAAAGCAAGCAAAGATATAT+TGG | - | chr2.1:4821746-4821765 | None:intergenic | 25.0% |
| ! | AAGTTTACATGACTTAAAAG+AGG | - | chr2.1:4820558-4820577 | None:intergenic | 25.0% |
| ! | AGAGAAAGAAAAAATAAAGG+GGG | - | chr2.1:4820945-4820964 | None:intergenic | 25.0% |
| ! | GATAATAGTATAAACAGTTC+TGG | + | chr2.1:4822264-4822283 | MS.gene057004:CDS | 25.0% |
| ! | GTAATAGTACTAAGAAGAAA+TGG | + | chr2.1:4820092-4820111 | MS.gene057004:CDS | 25.0% |
| ! | GTTGAATTTCAATTAGGTAA+AGG | - | chr2.1:4820889-4820908 | None:intergenic | 25.0% |
| ! | TAAAACAATGTGAAAAAGAG+TGG | - | chr2.1:4820725-4820744 | None:intergenic | 25.0% |
| ! | TGAAATTCAAAGTCCAATTA+TGG | + | chr2.1:4820376-4820395 | MS.gene057004:intron | 25.0% |
| ! | TGATTGTAAATTTACCTGAT+CGG | - | chr2.1:4819993-4820012 | None:intergenic | 25.0% |
| ! | TTCAAATCATGAAAACACAA+AGG | - | chr2.1:4820481-4820500 | None:intergenic | 25.0% |
| !! | GTTAATAATGTTGTTTGTTC+AGG | + | chr2.1:4820060-4820079 | MS.gene057004:intron | 25.0% |
| !! | TTTCTTTCTCTTTTTGGATT+GGG | + | chr2.1:4820954-4820973 | MS.gene057004:intron | 25.0% |
| !! | TTTTCTTTCTCTTTTTGGAT+TGG | + | chr2.1:4820953-4820972 | MS.gene057004:intron | 25.0% |
| !!! | AATGGTTATTTTGAGTTACA+AGG | + | chr2.1:4821510-4821529 | MS.gene057004:intron | 25.0% |
| !!! | TAAACACTGTCCATTTTTTT+AGG | + | chr2.1:4821077-4821096 | MS.gene057004:intron | 25.0% |
| AAATCATTCAACCCCAATAA+AGG | - | chr2.1:4820595-4820614 | None:intergenic | 30.0% | |
| AGAAAGAAAAAATAAAGGGG+GGG | - | chr2.1:4820943-4820962 | None:intergenic | 30.0% | |
| ATTATCAAAATCGATATGGC+AGG | + | chr2.1:4822346-4822365 | MS.gene057004:CDS | 30.0% | |
| CAATTATGGATCAGAATTCA+GGG | + | chr2.1:4820390-4820409 | MS.gene057004:intron | 30.0% | |
| CCATGTTATTATTATCAGCA+AGG | + | chr2.1:4821565-4821584 | MS.gene057004:intron | 30.0% | |
| CCTTCCATAAATTAACTGAA+GGG | - | chr2.1:4822296-4822315 | None:intergenic | 30.0% | |
| CCTTGCTGATAATAATAACA+TGG | - | chr2.1:4821568-4821587 | None:intergenic | 30.0% | |
| CTAAAGATTTCATCCTTATC+AGG | + | chr2.1:4820251-4820270 | MS.gene057004:CDS | 30.0% | |
| CTGATAAGGATGAAATCTTT+AGG | - | chr2.1:4820253-4820272 | None:intergenic | 30.0% | |
| GAATTTGACAGAATCAACTA+AGG | + | chr2.1:4822143-4822162 | MS.gene057004:CDS | 30.0% | |
| GAGAAAGAAAAAATAAAGGG+GGG | - | chr2.1:4820944-4820963 | None:intergenic | 30.0% | |
| GCTATCATCATTCATGTATT+CGG | - | chr2.1:4822040-4822059 | None:intergenic | 30.0% | |
| GGATTTGGGAGTTTAAAAAA+TGG | + | chr2.1:4820454-4820473 | MS.gene057004:intron | 30.0% | |
| GTTATTATTATCAGCAAGGA+TGG | + | chr2.1:4821569-4821588 | MS.gene057004:intron | 30.0% | |
| GTTGAATGATTTAGGTAGTT+AGG | + | chr2.1:4820603-4820622 | MS.gene057004:intron | 30.0% | |
| TACAAGATCTACCAATAGTT+GGG | + | chr2.1:4820433-4820452 | MS.gene057004:intron | 30.0% | |
| TATGGAAATCTTCTTCAGAA+GGG | + | chr2.1:4820119-4820138 | MS.gene057004:CDS | 30.0% | |
| TCCTTCCATAAATTAACTGA+AGG | - | chr2.1:4822297-4822316 | None:intergenic | 30.0% | |
| TTAAAGCAAAGCTAAGAATG+AGG | + | chr2.1:4821620-4821639 | MS.gene057004:CDS | 30.0% | |
| TTACAAGATCTACCAATAGT+TGG | + | chr2.1:4820432-4820451 | MS.gene057004:intron | 30.0% | |
| TTATCAACTTCATGTACATC+TGG | + | chr2.1:4822063-4822082 | MS.gene057004:CDS | 30.0% | |
| TTATTGGGGTTGAATGATTT+AGG | + | chr2.1:4820595-4820614 | MS.gene057004:intron | 30.0% | |
| TTCCTTCTTGATTGAAAAGT+AGG | - | chr2.1:4821949-4821968 | None:intergenic | 30.0% | |
| ! | ACAAGTACAACTTTTCTGAA+TGG | + | chr2.1:4822240-4822259 | MS.gene057004:CDS | 30.0% |
| ! | ACTTTTCAATCAAGAAGGAA+TGG | + | chr2.1:4821949-4821968 | MS.gene057004:CDS | 30.0% |
| ! | AGTAGTTAGGTTCTTTTGTA+TGG | + | chr2.1:4820995-4821014 | MS.gene057004:intron | 30.0% |
| ! | ATTTTACAGTCATCTTAAGG+AGG | - | chr2.1:4820920-4820939 | None:intergenic | 30.0% |
| ! | TAGGTTCTTTTGTATGGTTA+TGG | + | chr2.1:4820622-4820641 | MS.gene057004:intron | 30.0% |
| ! | TTCTTTCTCTTTTTGGATTG+GGG | + | chr2.1:4820955-4820974 | MS.gene057004:intron | 30.0% |
| !! | TTCCTACTTTTCAATCAAGA+AGG | + | chr2.1:4821944-4821963 | MS.gene057004:CDS | 30.0% |
| !!! | GATTTTGTGGATTTTGAGTT+TGG | - | chr2.1:4821793-4821812 | None:intergenic | 30.0% |
| !!! | TCCTCCTTTTTTCCTTTATT+GGG | + | chr2.1:4820580-4820599 | MS.gene057004:intron | 30.0% |
| !!! | TTCCTCCTTTTTTCCTTTAT+TGG | + | chr2.1:4820579-4820598 | MS.gene057004:intron | 30.0% |
| AGACTGCAAGCAATATTTAG+AGG | + | chr2.1:4821271-4821290 | MS.gene057004:CDS | 35.0% | |
| AGTTATGCATTATATTCCCC+TGG | - | chr2.1:4820655-4820674 | None:intergenic | 35.0% | |
| ATCTACCAATAGTTGGGATT+TGG | + | chr2.1:4820439-4820458 | MS.gene057004:intron | 35.0% | |
| ATGGTTATGGTAATATGCCA+GGG | + | chr2.1:4820635-4820654 | MS.gene057004:intron | 35.0% | |
| CAACCCCAATAAAGGAAAAA+AGG | - | chr2.1:4820587-4820606 | None:intergenic | 35.0% | |
| CCAATTATGGATCAGAATTC+AGG | + | chr2.1:4820389-4820408 | MS.gene057004:intron | 35.0% | |
| CCCTTCAGTTAATTTATGGA+AGG | + | chr2.1:4822293-4822312 | MS.gene057004:CDS | 35.0% | |
| CCTGAATTCTGATCCATAAT+TGG | - | chr2.1:4820392-4820411 | None:intergenic | 35.0% | |
| CTAAGAAGAAATGGAAGCTA+TGG | + | chr2.1:4820101-4820120 | MS.gene057004:CDS | 35.0% | |
| CTATGGAAATCTTCTTCAGA+AGG | + | chr2.1:4820118-4820137 | MS.gene057004:CDS | 35.0% | |
| CTGACCCTTCAGTTAATTTA+TGG | + | chr2.1:4822289-4822308 | MS.gene057004:CDS | 35.0% | |
| GATGAACAATATTCACAGCA+AGG | - | chr2.1:4820340-4820359 | None:intergenic | 35.0% | |
| TATGGTTATGGTAATATGCC+AGG | + | chr2.1:4820634-4820653 | MS.gene057004:intron | 35.0% | |
| TCAAATTCATGTAGCTAGGT+AGG | - | chr2.1:4822131-4822150 | None:intergenic | 35.0% | |
| TCAACACTTAATTACCTGTG+TGG | - | chr2.1:4821692-4821711 | None:intergenic | 35.0% | |
| TCTACCAATAGTTGGGATTT+GGG | + | chr2.1:4820440-4820459 | MS.gene057004:intron | 35.0% | |
| TCTGTCAAATTCATGTAGCT+AGG | - | chr2.1:4822135-4822154 | None:intergenic | 35.0% | |
| TGATTCTGTTAAGCTTGTAG+AGG | + | chr2.1:4821441-4821460 | MS.gene057004:CDS | 35.0% | |
| TTCCAATAAGAAAACCGATC+AGG | + | chr2.1:4819976-4819995 | MS.gene057004:CDS | 35.0% | |
| ! | GGGATTTTACAGTCATCTTA+AGG | - | chr2.1:4820923-4820942 | None:intergenic | 35.0% |
| ! | GGTAGTTAGGTTCTTTTGTA+TGG | + | chr2.1:4820616-4820635 | MS.gene057004:intron | 35.0% |
| ! | TGATAATAACTTGCCCTTAG+AGG | - | chr2.1:4822333-4822352 | None:intergenic | 35.0% |
| !! | TACCTGATCGGTTTTCTTAT+TGG | - | chr2.1:4819981-4820000 | None:intergenic | 35.0% |
| !! | TCTTTCTCTTTTTGGATTGG+GGG | + | chr2.1:4820956-4820975 | MS.gene057004:intron | 35.0% |
| !!! | CCTCCTTTTTTCCTTTATTG+GGG | + | chr2.1:4820581-4820600 | MS.gene057004:intron | 35.0% |
| !!! | GAAAAGAGACACTGATTTTG+TGG | - | chr2.1:4821806-4821825 | None:intergenic | 35.0% |
| AACAAGCAGCTGTTACTCTA+AGG | + | chr2.1:4821308-4821327 | MS.gene057004:CDS | 40.0% | |
| AACCATGACAACAAGAGCTT+AGG | + | chr2.1:4821838-4821857 | MS.gene057004:CDS | 40.0% | |
| AACTCCCAAATCCCAACTAT+TGG | - | chr2.1:4820447-4820466 | None:intergenic | 40.0% | |
| AAGCTAAGAATGAGGCAAGA+AGG | + | chr2.1:4821628-4821647 | MS.gene057004:CDS | 40.0% | |
| AATGTGAGGAAATCTCCAGA+AGG | + | chr2.1:4821376-4821395 | MS.gene057004:CDS | 40.0% | |
| AGATTTCATCCTTATCAGGC+AGG | + | chr2.1:4820255-4820274 | MS.gene057004:CDS | 40.0% | |
| AGGCTAAGCTCAAAACTTAC+AGG | + | chr2.1:4822163-4822182 | MS.gene057004:CDS | 40.0% | |
| CAAGCTTAACAGAATCAGCA+TGG | - | chr2.1:4821438-4821457 | None:intergenic | 40.0% | |
| CCCCAATAAAGGAAAAAAGG+AGG | - | chr2.1:4820584-4820603 | None:intergenic | 40.0% | |
| GAGCTTAAAGTCGAAGATGA+TGG | - | chr2.1:4822018-4822037 | None:intergenic | 40.0% | |
| GGTCAATGACTTCAGTAGTT+AGG | + | chr2.1:4820982-4821001 | MS.gene057004:intron | 40.0% | |
| TCTTCAACCATCAAGAAGAC+TGG | + | chr2.1:4820154-4820173 | MS.gene057004:CDS | 40.0% | |
| TGCAAGCAATATTTAGAGGC+AGG | + | chr2.1:4821275-4821294 | MS.gene057004:CDS | 40.0% | |
| TGGATCAGAATTCAGGGATT+AGG | + | chr2.1:4820396-4820415 | MS.gene057004:intron | 40.0% | |
| TGGTTATGGTAATATGCCAG+GGG | + | chr2.1:4820636-4820655 | MS.gene057004:intron | 40.0% | |
| TTAACTTCATCTGCAGTTCC+AGG | - | chr2.1:4821604-4821623 | None:intergenic | 40.0% | |
| ! | TAGGTTCTTTTGTATGGCTG+TGG | + | chr2.1:4821001-4821020 | MS.gene057004:intron | 40.0% |
| ! | TTCCTAAGCTCTTGTTGTCA+TGG | - | chr2.1:4821843-4821862 | None:intergenic | 40.0% |
| !! | AAGAGCTTTGAGAGCATTGA+GGG | + | chr2.1:4821240-4821259 | MS.gene057004:CDS | 40.0% |
| !! | GTGGTGTTACTAATCTGTCA+GGG | + | chr2.1:4821020-4821039 | MS.gene057004:intron | 40.0% |
| !! | TCTTTTTCCTCTGTTGCTTC+TGG | - | chr2.1:4822102-4822121 | None:intergenic | 40.0% |
| !! | TGGTGTTACTAATCTGTCAG+GGG | + | chr2.1:4821021-4821040 | MS.gene057004:intron | 40.0% |
| !! | TGTGGTGTTACTAATCTGTC+AGG | + | chr2.1:4821019-4821038 | MS.gene057004:intron | 40.0% |
| ATCGTTGTGCAACACCTCTA+AGG | + | chr2.1:4822316-4822335 | MS.gene057004:CDS | 45.0% | |
| ATCTATGCCAGAAGCAACAG+AGG | + | chr2.1:4822092-4822111 | MS.gene057004:CDS | 45.0% | |
| CAAGGATGGTGTGAAATTCC+TGG | + | chr2.1:4821583-4821602 | MS.gene057004:CDS | 45.0% | |
| CATCAAGAGGGATAGAGCAA+TGG | + | chr2.1:4821654-4821673 | MS.gene057004:CDS | 45.0% | |
| CATCCTTATCAGGCAGGAAT+GGG | + | chr2.1:4820261-4820280 | MS.gene057004:CDS | 45.0% | |
| CATTGCTCTATCCCTCTTGA+TGG | - | chr2.1:4821656-4821675 | None:intergenic | 45.0% | |
| CTCGAAAAAGAGCCTGAATG+CGG | - | chr2.1:4820294-4820313 | None:intergenic | 45.0% | |
| GAAGGAATGGTGTGACAACA+AGG | + | chr2.1:4821962-4821981 | MS.gene057004:CDS | 45.0% | |
| GAGTTCGAAGAGACTCGTAA+TGG | + | chr2.1:4822197-4822216 | MS.gene057004:CDS | 45.0% | |
| GCAGAAATATCAGCCACTCT+TGG | + | chr2.1:4821107-4821126 | MS.gene057004:intron | 45.0% | |
| GGCAAACAAACCATGTCCAT+GGG | + | chr2.1:4821885-4821904 | MS.gene057004:CDS | 45.0% | |
| TCAACCATCAAGAAGACTGG+TGG | + | chr2.1:4820157-4820176 | MS.gene057004:CDS | 45.0% | |
| TCACTCTTCCTGCTTGAGAT+TGG | - | chr2.1:4821916-4821935 | None:intergenic | 45.0% | |
| TCATCCTTATCAGGCAGGAA+TGG | + | chr2.1:4820260-4820279 | MS.gene057004:CDS | 45.0% | |
| TCGTTGTGCAACACCTCTAA+GGG | + | chr2.1:4822317-4822336 | MS.gene057004:CDS | 45.0% | |
| TGGCAAACAAACCATGTCCA+TGG | + | chr2.1:4821884-4821903 | MS.gene057004:CDS | 45.0% | |
| ! | GTGTATGCAAGCTCTGGTTA+GGG | + | chr2.1:4821330-4821349 | MS.gene057004:CDS | 45.0% |
| ! | TCTAAGGTGTATGCAAGCTC+TGG | + | chr2.1:4821324-4821343 | MS.gene057004:CDS | 45.0% |
| ! | TCTGTTGCTTCTGGCATAGA+TGG | - | chr2.1:4822093-4822112 | None:intergenic | 45.0% |
| !! | GAAATAGCTTGTTAGAGCGC+TGG | + | chr2.1:4821860-4821879 | MS.gene057004:CDS | 45.0% |
| !! | GAAGAGCTTTGAGAGCATTG+AGG | + | chr2.1:4821239-4821258 | MS.gene057004:CDS | 45.0% |
| !! | TCTCTTTTTGGATTGGGGGA+GGG | + | chr2.1:4820960-4820979 | MS.gene057004:intron | 45.0% |
| !! | TTCTCTTTTTGGATTGGGGG+AGG | + | chr2.1:4820959-4820978 | MS.gene057004:intron | 45.0% |
| AGCAACAGCAGCTGCAGTAT+CGG | - | chr2.1:4820212-4820231 | None:intergenic | 50.0% | |
| AGCACCACCAGTCTTCTTGA+TGG | - | chr2.1:4820164-4820183 | None:intergenic | 50.0% | |
| ATTGGACTCTCCCATGGACA+TGG | - | chr2.1:4821898-4821917 | None:intergenic | 50.0% | |
| CAGAATCAGCATGGTTGCGA+TGG | - | chr2.1:4821429-4821448 | None:intergenic | 50.0% | |
| CTTGAGATTGGACTCTCCCA+TGG | - | chr2.1:4821904-4821923 | None:intergenic | 50.0% | |
| GGCATACTCTCTATCCACAC+AGG | + | chr2.1:4821675-4821694 | MS.gene057004:CDS | 50.0% | |
| GTGTGAGAGCTAGGAATGTG+AGG | + | chr2.1:4821362-4821381 | MS.gene057004:CDS | 50.0% | |
| ! | GGTGTATGCAAGCTCTGGTT+AGG | + | chr2.1:4821329-4821348 | MS.gene057004:CDS | 50.0% |
| !! | AGCAGCTGCAGTATCGGTAA+TGG | - | chr2.1:4820206-4820225 | None:intergenic | 50.0% |
| !! | CTCTTTTTGGATTGGGGGAG+GGG | + | chr2.1:4820961-4820980 | MS.gene057004:intron | 50.0% |
| !! | GCAAGAAGGTGCCATCAAGA+GGG | + | chr2.1:4821642-4821661 | MS.gene057004:CDS | 50.0% |
| !! | TAGCTTGTTAGAGCGCTGGA+TGG | + | chr2.1:4821864-4821883 | MS.gene057004:CDS | 50.0% |
| !! | TTTGAGAGCATTGAGGGCAG+TGG | + | chr2.1:4821246-4821265 | MS.gene057004:CDS | 50.0% |
| !!! | GGCTCTTTTTCGAGCCTTCT+TGG | + | chr2.1:4820300-4820319 | MS.gene057004:CDS | 50.0% |
| CAGCCCATTCCTGCCTGATA+AGG | - | chr2.1:4820267-4820286 | None:intergenic | 55.0% | |
| GGGAGAGTCCAATCTCAAGC+AGG | + | chr2.1:4821905-4821924 | MS.gene057004:CDS | 55.0% | |
| TGCTGCACTGCTTTGCCTTC+TGG | - | chr2.1:4821394-4821413 | None:intergenic | 55.0% | |
| TTCAGGCACGTGTGAGAGCT+AGG | + | chr2.1:4821353-4821372 | MS.gene057004:CDS | 55.0% | |
| ! | ATGGGCTGCTATCCGCATTC+AGG | + | chr2.1:4820279-4820298 | MS.gene057004:CDS | 55.0% |
| ! | GCAAGCTCTGGTTAGGGTTC+AGG | + | chr2.1:4821336-4821355 | MS.gene057004:CDS | 55.0% |
| !! | GGCAAGAAGGTGCCATCAAG+AGG | + | chr2.1:4821641-4821660 | MS.gene057004:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 4819941 | 4822374 | 4819941 | ID=MS.gene057004 |
| chr2.1 | mRNA | 4819941 | 4822374 | 4819941 | ID=MS.gene057004.t1;Parent=MS.gene057004 |
| chr2.1 | exon | 4819941 | 4819997 | 4819941 | ID=MS.gene057004.t1.exon1;Parent=MS.gene057004.t1 |
| chr2.1 | CDS | 4819941 | 4819997 | 4819941 | ID=cds.MS.gene057004.t1;Parent=MS.gene057004.t1 |
| chr2.1 | exon | 4820082 | 4820321 | 4820082 | ID=MS.gene057004.t1.exon2;Parent=MS.gene057004.t1 |
| chr2.1 | CDS | 4820082 | 4820321 | 4820082 | ID=cds.MS.gene057004.t1;Parent=MS.gene057004.t1 |
| chr2.1 | exon | 4821235 | 4821462 | 4821235 | ID=MS.gene057004.t1.exon3;Parent=MS.gene057004.t1 |
| chr2.1 | CDS | 4821235 | 4821462 | 4821235 | ID=cds.MS.gene057004.t1;Parent=MS.gene057004.t1 |
| chr2.1 | exon | 4821583 | 4821696 | 4821583 | ID=MS.gene057004.t1.exon4;Parent=MS.gene057004.t1 |
| chr2.1 | CDS | 4821583 | 4821696 | 4821583 | ID=cds.MS.gene057004.t1;Parent=MS.gene057004.t1 |
| chr2.1 | exon | 4821772 | 4822374 | 4821772 | ID=MS.gene057004.t1.exon5;Parent=MS.gene057004.t1 |
| chr2.1 | CDS | 4821772 | 4822374 | 4821772 | ID=cds.MS.gene057004.t1;Parent=MS.gene057004.t1 |
| Gene Sequence |
| Protein sequence |
