Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073930.t1 | XP_003590177.1 | 98.8 | 503 | 6 | 0 | 1 | 503 | 1 | 503 | 4.30E-274 | 953.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073930.t1 | P54144 | 80.6 | 501 | 87 | 3 | 6 | 499 | 3 | 500 | 6.2e-221 | 768.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073930.t1 | G7I6P4 | 98.8 | 503 | 6 | 0 | 1 | 503 | 1 | 503 | 3.1e-274 | 953.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005052 | MS.gene073930 | PPI |
| MS.gene74897 | MS.gene073930 | PPI |
| MS.gene058774 | MS.gene073930 | PPI |
| MS.gene07605 | MS.gene073930 | PPI |
| MS.gene058775 | MS.gene073930 | PPI |
| MS.gene005054 | MS.gene073930 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073930.t1 | MTR_1g045550 | 98.807 | 503 | 6 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1013 |
| MS.gene073930.t1 | MTR_7g098930 | 74.948 | 483 | 119 | 2 | 1 | 482 | 1 | 482 | 0.0 | 736 |
| MS.gene073930.t1 | MTR_1g079760 | 74.359 | 507 | 118 | 5 | 1 | 498 | 1 | 504 | 0.0 | 734 |
| MS.gene073930.t1 | MTR_7g113340 | 73.444 | 482 | 126 | 2 | 1 | 481 | 1 | 481 | 0.0 | 719 |
| MS.gene073930.t1 | MTR_3g463730 | 66.372 | 452 | 147 | 4 | 45 | 493 | 11 | 460 | 0.0 | 594 |
| MS.gene073930.t1 | MTR_7g115050 | 27.007 | 411 | 239 | 13 | 113 | 501 | 100 | 471 | 1.92e-23 | 103 |
| MS.gene073930.t1 | MTR_1g036410 | 27.097 | 465 | 272 | 16 | 48 | 482 | 24 | 451 | 1.26e-22 | 101 |
| MS.gene073930.t1 | MTR_8g074750 | 25.979 | 485 | 295 | 15 | 48 | 502 | 30 | 480 | 4.84e-20 | 93.2 |
| MS.gene073930.t1 | MTR_7g069640 | 26.638 | 473 | 280 | 16 | 48 | 485 | 22 | 462 | 1.38e-18 | 89.0 |
| MS.gene073930.t1 | MTR_8g095040 | 23.958 | 480 | 305 | 11 | 48 | 496 | 29 | 479 | 1.05e-16 | 83.2 |
| MS.gene073930.t1 | MTR_4g017820 | 26.971 | 482 | 281 | 16 | 48 | 495 | 22 | 466 | 3.50e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073930.t1 | AT4G13510 | 80.478 | 502 | 88 | 3 | 5 | 499 | 2 | 500 | 0.0 | 828 |
| MS.gene073930.t1 | AT3G24300 | 77.465 | 497 | 99 | 4 | 6 | 497 | 7 | 495 | 0.0 | 779 |
| MS.gene073930.t1 | AT3G24290 | 79.237 | 472 | 95 | 1 | 6 | 477 | 7 | 475 | 0.0 | 769 |
| MS.gene073930.t1 | AT1G64780 | 76.190 | 483 | 104 | 7 | 27 | 500 | 31 | 511 | 0.0 | 738 |
| MS.gene073930.t1 | AT4G28700 | 74.745 | 491 | 116 | 4 | 5 | 489 | 6 | 494 | 0.0 | 712 |
| MS.gene073930.t1 | AT2G38290 | 27.233 | 459 | 283 | 13 | 48 | 485 | 20 | 448 | 5.45e-23 | 102 |
| MS.gene073930.t1 | AT2G38290 | 27.809 | 356 | 221 | 10 | 136 | 485 | 7 | 332 | 1.41e-18 | 87.8 |
Find 152 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGACCCTATGGGTTATTTA+TGG | 0.176472 | 1.4:+29822726 | MS.gene073930:CDS |
| GGCACATGTGATACAAATTT+TGG | 0.187812 | 1.4:+29822771 | MS.gene073930:CDS |
| TGGTGGTATTGCTGGTTTAT+GGG | 0.202357 | 1.4:+29822005 | MS.gene073930:CDS |
| AGTGCCTCTCTTGTTGTTCT+TGG | 0.219537 | 1.4:+29822099 | MS.gene073930:CDS |
| TTGGTGGTATTGCTGGTTTA+TGG | 0.237577 | 1.4:+29822004 | MS.gene073930:CDS |
| CCAGGTTTATCCGGGTAAAC+TGG | 0.249185 | 1.4:+29822702 | MS.gene073930:CDS |
| TTCATTGGAAAACATTTCTT+TGG | 0.268354 | 1.4:+29821703 | MS.gene073930:CDS |
| ATTCTCAGTCCTTATAATTC+AGG | 0.269091 | 1.4:+29822177 | MS.gene073930:CDS |
| CTGTGGTTTCTCATTGGTTT+TGG | 0.272044 | 1.4:+29821887 | MS.gene073930:CDS |
| GCTTCGGCGTTGGTGGCGTT+GGG | 0.277122 | 1.4:-29821415 | None:intergenic |
| TTCTTGGCACTTTCATGCTT+TGG | 0.277934 | 1.4:+29822115 | MS.gene073930:CDS |
| GGTGGTGGAGGGAAATTATT+AGG | 0.301790 | 1.4:+29822748 | MS.gene073930:CDS |
| CATATGGTTGGTGGTATTGC+TGG | 0.320936 | 1.4:+29821997 | MS.gene073930:CDS |
| ACACCTTCAAATGGTTTCAT+TGG | 0.325076 | 1.4:+29821688 | MS.gene073930:CDS |
| GGCTTCGGCGTTGGTGGCGT+TGG | 0.336256 | 1.4:-29821416 | None:intergenic |
| CTTATTGAAGGTCCGCGAAT+TGG | 0.341909 | 1.4:+29822033 | MS.gene073930:CDS |
| ATTGGACGGTTCGATCATTC+TGG | 0.345994 | 1.4:+29822051 | MS.gene073930:CDS |
| TTTACCCTGTGGTTTCTCAT+TGG | 0.351616 | 1.4:+29821881 | MS.gene073930:CDS |
| CGACCCTATGGGTTATTTAT+GGG | 0.352551 | 1.4:+29822727 | MS.gene073930:CDS |
| GATGAAATTTGCCGCGGCTT+CGG | 0.353087 | 1.4:-29821431 | None:intergenic |
| GGCACTTTCATGCTTTGGTT+TGG | 0.354842 | 1.4:+29822120 | MS.gene073930:CDS |
| TGTTTGACACTGCTGTGAAC+TGG | 0.360310 | 1.4:-29821459 | None:intergenic |
| TGTAATTGTGCTGCTTCTAA+TGG | 0.364233 | 1.4:-29822616 | None:intergenic |
| GATGAAGGATCACATAGAAA+TGG | 0.373243 | 1.4:+29822934 | MS.gene073930:CDS |
| CTTTCATGCTTTGGTTTGGT+TGG | 0.380571 | 1.4:+29822124 | MS.gene073930:CDS |
| TGGGTGGGTAAGTGCAACTA+TGG | 0.381238 | 1.4:+29822801 | MS.gene073930:CDS |
| TGGCTCCGGTGTTGTTCATA+TGG | 0.393312 | 1.4:+29821981 | MS.gene073930:CDS |
| GTATGTGAACCAGGTTTATC+CGG | 0.405498 | 1.4:+29822693 | MS.gene073930:CDS |
| GGTAAACTGGGTCGACCCTA+TGG | 0.406965 | 1.4:+29822715 | MS.gene073930:CDS |
| CGTTAGAGCTGCCGTGCAAC+CGG | 0.414595 | 1.4:-29822398 | None:intergenic |
| TCGCAGCTCGCGCAGTTCAT+CGG | 0.418885 | 1.4:+29821391 | MS.gene073930:CDS |
| TGAAGATGAACTTGCGGGTA+TGG | 0.421273 | 1.4:+29822873 | MS.gene073930:CDS |
| AGTTAACTACCTGAATTATA+AGG | 0.425481 | 1.4:-29822186 | None:intergenic |
| TCAACTGAAGATGAACTTGC+GGG | 0.428559 | 1.4:+29822868 | MS.gene073930:CDS |
| AAAGAATTCTCTCCGGTCAC+TGG | 0.431120 | 1.4:+29822434 | MS.gene073930:CDS |
| CGCCACCAACGCCGAAGCCG+CGG | 0.431981 | 1.4:+29821420 | MS.gene073930:CDS |
| ATGCTTTGGTTTGGTTGGTA+TGG | 0.433222 | 1.4:+29822129 | MS.gene073930:CDS |
| TACAATCACAAATCTGTAGT+TGG | 0.437561 | 1.4:-29823003 | None:intergenic |
| AGAATCTTGGTGAAGGAACC+AGG | 0.441335 | 1.4:-29822159 | None:intergenic |
| GTAAGCTGAGAATAGAAGAT+AGG | 0.441751 | 1.4:-29821515 | None:intergenic |
| ATTTGCCGCGGCTTCGGCGT+TGG | 0.441756 | 1.4:-29821425 | None:intergenic |
| TACACGGTGGGTGTGGCGCG+TGG | 0.444248 | 1.4:+29822635 | MS.gene073930:CDS |
| GGTTGGTATGGTTTCAACCC+TGG | 0.447548 | 1.4:+29822141 | MS.gene073930:CDS |
| GGTGTTCCGTTGTAGAACCT+TGG | 0.448411 | 1.4:+29822512 | MS.gene073930:CDS |
| AAAACATTTCTTTGGTCTGA+AGG | 0.450771 | 1.4:+29821711 | MS.gene073930:CDS |
| GGGTTATTTATGGGTGGTGG+AGG | 0.451374 | 1.4:+29822736 | MS.gene073930:CDS |
| TTTCCAATGAAACCATTTGA+AGG | 0.457318 | 1.4:-29821691 | None:intergenic |
| TGCCGCGGCTTCGGCGTTGG+TGG | 0.461817 | 1.4:-29821422 | None:intergenic |
| GTGTTCCGTTGTAGAACCTT+GGG | 0.462761 | 1.4:+29822513 | MS.gene073930:CDS |
| TATGGGTTATTTATGGGTGG+TGG | 0.467977 | 1.4:+29822733 | MS.gene073930:CDS |
| TTATTCAAAACAAAGAATAG+TGG | 0.471377 | 1.4:-29822826 | None:intergenic |
| ATGAAGGATCACATAGAAAT+GGG | 0.473794 | 1.4:+29822935 | MS.gene073930:CDS |
| AACGTCCTCGACGCTGCTGC+TGG | 0.476966 | 1.4:+29821622 | MS.gene073930:CDS |
| ATAAGCAAACCCACCATGTC+GGG | 0.481927 | 1.4:-29822902 | None:intergenic |
| ACACGGTGGGTGTGGCGCGT+GGG | 0.483461 | 1.4:+29822636 | MS.gene073930:CDS |
| ATGGAGTGCGGTGGGGAGGA+CGG | 0.485440 | 1.4:+29822357 | MS.gene073930:CDS |
| GGTGGTATTGCTGGTTTATG+GGG | 0.486687 | 1.4:+29822006 | MS.gene073930:CDS |
| ATTTACTCATCGTTTCTCAC+AGG | 0.487248 | 1.4:+29821853 | MS.gene073930:CDS |
| TCCGGTGTTGTTCATATGGT+TGG | 0.488732 | 1.4:+29821985 | MS.gene073930:CDS |
| CACGGTGGGTGTGGCGCGTG+GGG | 0.489854 | 1.4:+29822637 | MS.gene073930:CDS |
| GCTTATGCTTATGAAGATGA+AGG | 0.489963 | 1.4:+29822919 | MS.gene073930:CDS |
| GTTTGACACTGCTGTGAACT+GGG | 0.490561 | 1.4:-29821458 | None:intergenic |
| GGTTTCGCTGCGATAACCGC+CGG | 0.495174 | 1.4:+29822490 | MS.gene073930:CDS |
| ATTATAAGGACTGAGAATCT+TGG | 0.495971 | 1.4:-29822172 | None:intergenic |
| TGAATAAATTGAAGTTGTTG+AGG | 0.497576 | 1.4:+29822842 | MS.gene073930:CDS |
| TAGGTACTTATTATGGGCAA+TGG | 0.500219 | 1.4:+29822338 | MS.gene073930:intron |
| GGCAATGGAGTGCGGTGGGG+AGG | 0.501855 | 1.4:+29822353 | MS.gene073930:CDS |
| GTGGTGGAGGGAAATTATTA+GGG | 0.501970 | 1.4:+29822749 | MS.gene073930:CDS |
| TTATGGGGAGCACTTATTGA+AGG | 0.501971 | 1.4:+29822021 | MS.gene073930:CDS |
| TATGGGCAATGGAGTGCGGT+GGG | 0.503029 | 1.4:+29822349 | MS.gene073930:CDS |
| AAACAAAAGGTCCCCGGTGT+TGG | 0.506596 | 1.4:-29821935 | None:intergenic |
| TGACTCCGGTGCCAAACAAA+AGG | 0.510137 | 1.4:-29821948 | None:intergenic |
| TGGGCTAGCGCAACCAACAC+CGG | 0.511581 | 1.4:+29821922 | MS.gene073930:CDS |
| ATCGGTCACGTTCCAGTGAC+CGG | 0.514328 | 1.4:-29822446 | None:intergenic |
| AGCTGCGAAACAGAGCATTC+CGG | 0.515010 | 1.4:-29821376 | None:intergenic |
| GGTCGAGCCGTGGCACTTCG+CGG | 0.515352 | 1.4:+29822072 | MS.gene073930:CDS |
| CCAGTTTACCCGGATAAACC+TGG | 0.516204 | 1.4:-29822702 | None:intergenic |
| CAGGTTTATCCGGGTAAACT+GGG | 0.517085 | 1.4:+29822703 | MS.gene073930:CDS |
| TTCGGGAAAAGAATTCTCTC+CGG | 0.517363 | 1.4:+29822427 | MS.gene073930:CDS |
| TTGAAGGTCCGCGAATTGGA+CGG | 0.518069 | 1.4:+29822037 | MS.gene073930:CDS |
| GTTGGTAAGCATGATGTTCA+TGG | 0.520266 | 1.4:-29821602 | None:intergenic |
| GATGTCTGCAACGGATTACT+CGG | 0.521512 | 1.4:+29822466 | MS.gene073930:CDS |
| GTGCAACAAACTCGCGGAGA+AGG | 0.523705 | 1.4:+29822579 | MS.gene073930:CDS |
| TGCGCTAGCCCAACCATCAC+CGG | 0.524846 | 1.4:-29821911 | None:intergenic |
| GGTTATTTATGGGTGGTGGA+GGG | 0.528393 | 1.4:+29822737 | MS.gene073930:CDS |
| GGGCTAGCGCAACCAACACC+GGG | 0.530553 | 1.4:+29821923 | MS.gene073930:CDS |
| CCCACCAAACATGTCGCTGC+CGG | 0.531903 | 1.4:+29821357 | None:intergenic |
| GTTTCGCTGCGATAACCGCC+GGG | 0.534726 | 1.4:+29822491 | MS.gene073930:CDS |
| GCGGTGACGACGACATTAGC+CGG | 0.538079 | 1.4:+29822379 | MS.gene073930:CDS |
| TGATCGAACCGTCCAATTCG+CGG | 0.541228 | 1.4:-29822045 | None:intergenic |
| CCCTATGGGTTATTTATGGG+TGG | 0.544513 | 1.4:+29822730 | MS.gene073930:CDS |
| GCACAATTACACGGTGGGTG+TGG | 0.544851 | 1.4:+29822628 | MS.gene073930:CDS |
| CCTTGGGCAGCAATTGTATG+TGG | 0.545119 | 1.4:+29822529 | MS.gene073930:CDS |
| TTTACTCATCGTTTCTCACA+GGG | 0.546630 | 1.4:+29821854 | MS.gene073930:CDS |
| ATCTGTAGTTGGAGTAGGAG+TGG | 0.549034 | 1.4:-29822992 | None:intergenic |
| TCGTTCCGCAATAGAGCCGC+TGG | 0.550227 | 1.4:-29821809 | None:intergenic |
| ATAGAAATGGGACTCAATTG+AGG | 0.554439 | 1.4:+29822947 | MS.gene073930:CDS |
| AGGTTCTACAACGGAACACC+CGG | 0.560703 | 1.4:-29822509 | None:intergenic |
| GACGACATTAGCCGGTTGCA+CGG | 0.562542 | 1.4:+29822387 | MS.gene073930:CDS |
| ACTGTGTCCGCGAAGTGCCA+CGG | 0.564948 | 1.4:-29822079 | None:intergenic |
| GTCCTCGACGCTGCTGCTGG+TGG | 0.568629 | 1.4:+29821625 | MS.gene073930:CDS |
| CAAGTTGCATAGAGAAAACA+AGG | 0.569214 | 1.4:-29821537 | None:intergenic |
| AAAAGAAGAGTATGTGAACC+AGG | 0.570298 | 1.4:+29822684 | MS.gene073930:CDS |
| CTTCGGCGTTGGTGGCGTTG+GGG | 0.570819 | 1.4:-29821414 | None:intergenic |
| AACTGAACCAGCACAAAGCA+TGG | 0.571080 | 1.4:-29821566 | None:intergenic |
| CACAGGGTTTGTTTACCCTG+TGG | 0.571684 | 1.4:+29821870 | MS.gene073930:CDS |
| CACAAATCTGTAGTTGGAGT+AGG | 0.574103 | 1.4:-29822997 | None:intergenic |
| TATGTGAACCAGGTTTATCC+GGG | 0.576473 | 1.4:+29822694 | MS.gene073930:CDS |
| TTCAACTGAAGATGAACTTG+CGG | 0.585243 | 1.4:+29822867 | MS.gene073930:CDS |
| TGAAGGTGTTCCAAAAGCAA+AGG | 0.585376 | 1.4:-29821674 | None:intergenic |
| GGTGTTGTTCATATGGTTGG+TGG | 0.587357 | 1.4:+29821988 | MS.gene073930:CDS |
| GTAAACTGGGTCGACCCTAT+GGG | 0.589828 | 1.4:+29822716 | MS.gene073930:CDS |
| TAGGGTCGACCCAGTTTACC+CGG | 0.590994 | 1.4:-29822712 | None:intergenic |
| TATCACCAGCGGCTCTATTG+CGG | 0.592562 | 1.4:+29821804 | MS.gene073930:CDS |
| GCCAGCAAAATCAATGACTC+CGG | 0.596809 | 1.4:-29821962 | None:intergenic |
| GGGTGGGTAAGTGCAACTAT+GGG | 0.598468 | 1.4:+29822802 | MS.gene073930:CDS |
| TGGATTTGACCCGACATGGT+GGG | 0.598703 | 1.4:+29822893 | MS.gene073930:CDS |
| GGTGCCAAACAAAAGGTCCC+CGG | 0.599775 | 1.4:-29821941 | None:intergenic |
| CATAAGCAAACCCACCATGT+CGG | 0.601038 | 1.4:-29822903 | None:intergenic |
| CAAAACCAATGAGAAACCAC+AGG | 0.603230 | 1.4:-29821886 | None:intergenic |
| ACCACCCATAAATAACCCAT+AGG | 0.609604 | 1.4:-29822731 | None:intergenic |
| TTATGGGCAATGGAGTGCGG+TGG | 0.609738 | 1.4:+29822348 | MS.gene073930:CDS |
| GAGTGCGGTGGGGAGGACGG+CGG | 0.614067 | 1.4:+29822360 | MS.gene073930:CDS |
| CGATCATTCTGGTCGAGCCG+TGG | 0.616254 | 1.4:+29822062 | MS.gene073930:CDS |
| CGCCACCAGCAGCAGCGTCG+AGG | 0.620566 | 1.4:-29821627 | None:intergenic |
| AGGACTGAGAATCTTGGTGA+AGG | 0.622311 | 1.4:-29822166 | None:intergenic |
| CCACCCATAAATAACCCATA+GGG | 0.625187 | 1.4:-29822730 | None:intergenic |
| GGTATGGATTTGACCCGACA+TGG | 0.625832 | 1.4:+29822889 | MS.gene073930:CDS |
| GAGTAATCCGTTGCAGACAT+CGG | 0.629600 | 1.4:-29822464 | None:intergenic |
| AGCAGCAGCGTCGAGGACGT+TGG | 0.631989 | 1.4:-29821620 | None:intergenic |
| AAGCAGCACAATTACACGGT+GGG | 0.632622 | 1.4:+29822623 | MS.gene073930:CDS |
| AACGTGACCGATGTCTGCAA+CGG | 0.633445 | 1.4:+29822457 | MS.gene073930:CDS |
| ATGGATTTGACCCGACATGG+TGG | 0.636723 | 1.4:+29822892 | MS.gene073930:CDS |
| TGGTGGAGGGAAATTATTAG+GGG | 0.638481 | 1.4:+29822750 | MS.gene073930:CDS |
| CCACATACAATTGCTGCCCA+AGG | 0.640235 | 1.4:-29822529 | None:intergenic |
| ACCAACCATATGAACAACAC+CGG | 0.643450 | 1.4:-29821986 | None:intergenic |
| GGTGCAGATGAAATTTGCCG+CGG | 0.660117 | 1.4:-29821437 | None:intergenic |
| AATCGCGTGCAACAAACTCG+CGG | 0.668565 | 1.4:+29822573 | MS.gene073930:CDS |
| TTAGAAGCAGCACAATTACA+CGG | 0.668867 | 1.4:+29822619 | MS.gene073930:CDS |
| ATGGGCAATGGAGTGCGGTG+GGG | 0.682220 | 1.4:+29822350 | MS.gene073930:CDS |
| TTATTATGGGCAATGGAGTG+CGG | 0.683210 | 1.4:+29822345 | MS.gene073930:CDS |
| GAATCTTGGTGAAGGAACCA+GGG | 0.685698 | 1.4:-29822158 | None:intergenic |
| GTCTGCAACGGATTACTCGG+CGG | 0.686227 | 1.4:+29822469 | MS.gene073930:CDS |
| AGAGCCGCTGGTGATACCAG+CGG | 0.694743 | 1.4:-29821797 | None:intergenic |
| AGTGCCAAGAACAACAAGAG+AGG | 0.695048 | 1.4:-29822103 | None:intergenic |
| TGCTGCCCAAGGTTCTACAA+CGG | 0.701646 | 1.4:-29822518 | None:intergenic |
| GCAGCCGCTGGTATCACCAG+CGG | 0.703921 | 1.4:+29821793 | MS.gene073930:CDS |
| GCACGCGATTAAAACAATAG+CGG | 0.740384 | 1.4:-29822560 | None:intergenic |
| GGCTAGCGCAACCAACACCG+GGG | 0.741776 | 1.4:+29821924 | MS.gene073930:CDS |
| GAAGCAGCACAATTACACGG+TGG | 0.750534 | 1.4:+29822622 | MS.gene073930:CDS |
| TTCTACAACGGAACACCCGG+CGG | 0.760823 | 1.4:-29822506 | None:intergenic |
| AAAACCAATGAGAAACCACA+GGG | 0.764570 | 1.4:-29821885 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAATTAAAATTTGAAA+AGG | - | chr1.4:29822300-29822319 | None:intergenic | 10.0% |
| !!! | TTAAATTTTTATGGAATTTT+AGG | + | chr1.4:29822319-29822338 | MS.gene073930:intron | 10.0% |
| !!! | ATACAAATTTTGGTTATTAT+TGG | + | chr1.4:29822781-29822800 | MS.gene073930:CDS | 15.0% |
| !!! | TACAAATTTTGGTTATTATT+GGG | + | chr1.4:29822782-29822801 | MS.gene073930:CDS | 15.0% |
| !! | TTATTCAAAACAAAGAATAG+TGG | - | chr1.4:29822829-29822848 | None:intergenic | 20.0% |
| !!! | GAATTTTAGGTACTTATTAT+GGG | + | chr1.4:29822332-29822351 | MS.gene073930:intron | 20.0% |
| ! | AGTTAACTACCTGAATTATA+AGG | - | chr1.4:29822189-29822208 | None:intergenic | 25.0% |
| ! | TGAATAAATTGAAGTTGTTG+AGG | + | chr1.4:29822842-29822861 | MS.gene073930:CDS | 25.0% |
| ! | TTCATTGGAAAACATTTCTT+TGG | + | chr1.4:29821703-29821722 | MS.gene073930:CDS | 25.0% |
| !! | ACTAACTACTTTCATTGTTT+TGG | + | chr1.4:29822223-29822242 | MS.gene073930:intron | 25.0% |
| !! | CTGTAATCAAAATTTTCAGT+CGG | - | chr1.4:29821742-29821761 | None:intergenic | 25.0% |
| !!! | AAATTTTGGTTATTATTGGG+TGG | + | chr1.4:29822785-29822804 | MS.gene073930:CDS | 25.0% |
| !!! | AATTTTGGTTATTATTGGGT+GGG | + | chr1.4:29822786-29822805 | MS.gene073930:CDS | 25.0% |
| !!! | ACAGTTATTTTCTCTATCAA+TGG | + | chr1.4:29821758-29821777 | MS.gene073930:CDS | 25.0% |
| !!! | CAGTTATTTTCTCTATCAAT+GGG | + | chr1.4:29821759-29821778 | MS.gene073930:CDS | 25.0% |
| !!! | GGAATTTTAGGTACTTATTA+TGG | + | chr1.4:29822331-29822350 | MS.gene073930:intron | 25.0% |
| AAAACATTTCTTTGGTCTGA+AGG | + | chr1.4:29821711-29821730 | MS.gene073930:CDS | 30.0% | |
| ATGAAGGATCACATAGAAAT+GGG | + | chr1.4:29822935-29822954 | MS.gene073930:CDS | 30.0% | |
| ATTATAAGGACTGAGAATCT+TGG | - | chr1.4:29822175-29822194 | None:intergenic | 30.0% | |
| ATTCTCAGTCCTTATAATTC+AGG | + | chr1.4:29822177-29822196 | MS.gene073930:CDS | 30.0% | |
| TTTCCAATGAAACCATTTGA+AGG | - | chr1.4:29821694-29821713 | None:intergenic | 30.0% | |
| AAAACCAATGAGAAACCACA+GGG | - | chr1.4:29821888-29821907 | None:intergenic | 35.0% | |
| ACACCTTCAAATGGTTTCAT+TGG | + | chr1.4:29821688-29821707 | MS.gene073930:CDS | 35.0% | |
| ATAGAAATGGGACTCAATTG+AGG | + | chr1.4:29822947-29822966 | MS.gene073930:CDS | 35.0% | |
| ATTTACTCATCGTTTCTCAC+AGG | + | chr1.4:29821853-29821872 | MS.gene073930:CDS | 35.0% | |
| CAAGTTGCATAGAGAAAACA+AGG | - | chr1.4:29821540-29821559 | None:intergenic | 35.0% | |
| GATGAAGGATCACATAGAAA+TGG | + | chr1.4:29822934-29822953 | MS.gene073930:CDS | 35.0% | |
| GCTTATGCTTATGAAGATGA+AGG | + | chr1.4:29822919-29822938 | MS.gene073930:CDS | 35.0% | |
| GTAAGCTGAGAATAGAAGAT+AGG | - | chr1.4:29821518-29821537 | None:intergenic | 35.0% | |
| TAGGTACTTATTATGGGCAA+TGG | + | chr1.4:29822338-29822357 | MS.gene073930:intron | 35.0% | |
| TTAGAAGCAGCACAATTACA+CGG | + | chr1.4:29822619-29822638 | MS.gene073930:CDS | 35.0% | |
| TTCAACAAGAGCTTTCCATT+AGG | - | chr1.4:29822254-29822273 | None:intergenic | 35.0% | |
| TTCAACTGAAGATGAACTTG+CGG | + | chr1.4:29822867-29822886 | MS.gene073930:CDS | 35.0% | |
| TTTACTCATCGTTTCTCACA+GGG | + | chr1.4:29821854-29821873 | MS.gene073930:CDS | 35.0% | |
| ! | AAAAGAAGAGTATGTGAACC+AGG | + | chr1.4:29822684-29822703 | MS.gene073930:CDS | 35.0% |
| ! | CTCTTCTTTTGCAAACAAAG+CGG | - | chr1.4:29822674-29822693 | None:intergenic | 35.0% |
| ! | GGCACATGTGATACAAATTT+TGG | + | chr1.4:29822771-29822790 | MS.gene073930:CDS | 35.0% |
| !! | CTTGTTTTCTCTATGCAACT+TGG | + | chr1.4:29821538-29821557 | MS.gene073930:CDS | 35.0% |
| !! | TGTAATTGTGCTGCTTCTAA+TGG | - | chr1.4:29822619-29822638 | None:intergenic | 35.0% |
| !!! | ATTGTTTTGGATGCACCTAA+TGG | + | chr1.4:29822236-29822255 | MS.gene073930:intron | 35.0% |
| ACCAACCATATGAACAACAC+CGG | - | chr1.4:29821989-29822008 | None:intergenic | 40.0% | |
| ACCACCCATAAATAACCCAT+AGG | - | chr1.4:29822734-29822753 | None:intergenic | 40.0% | |
| CAAAACCAATGAGAAACCAC+AGG | - | chr1.4:29821889-29821908 | None:intergenic | 40.0% | |
| CACAAATCTGTAGTTGGAGT+AGG | - | chr1.4:29823000-29823019 | None:intergenic | 40.0% | |
| CCACCCATAAATAACCCATA+GGG | - | chr1.4:29822733-29822752 | None:intergenic | 40.0% | |
| GCACGCGATTAAAACAATAG+CGG | - | chr1.4:29822563-29822582 | None:intergenic | 40.0% | |
| GTATGTGAACCAGGTTTATC+CGG | + | chr1.4:29822693-29822712 | MS.gene073930:CDS | 40.0% | |
| TATGTGAACCAGGTTTATCC+GGG | + | chr1.4:29822694-29822713 | MS.gene073930:CDS | 40.0% | |
| TCAACTGAAGATGAACTTGC+GGG | + | chr1.4:29822868-29822887 | MS.gene073930:CDS | 40.0% | |
| TGGTGGAGGGAAATTATTAG+GGG | + | chr1.4:29822750-29822769 | MS.gene073930:CDS | 40.0% | |
| TTATTATGGGCAATGGAGTG+CGG | + | chr1.4:29822345-29822364 | MS.gene073930:CDS | 40.0% | |
| TTCGGGAAAAGAATTCTCTC+CGG | + | chr1.4:29822427-29822446 | MS.gene073930:CDS | 40.0% | |
| TTCTTGGCACTTTCATGCTT+TGG | + | chr1.4:29822115-29822134 | MS.gene073930:CDS | 40.0% | |
| TTTACCCTGTGGTTTCTCAT+TGG | + | chr1.4:29821881-29821900 | MS.gene073930:CDS | 40.0% | |
| ! | CGACCCTATGGGTTATTTAT+GGG | + | chr1.4:29822727-29822746 | MS.gene073930:CDS | 40.0% |
| ! | GGCGTTTTCTACTATCTCTT+CGG | + | chr1.4:29821646-29821665 | MS.gene073930:CDS | 40.0% |
| ! | GTGGTGGAGGGAAATTATTA+GGG | + | chr1.4:29822749-29822768 | MS.gene073930:CDS | 40.0% |
| ! | GTTGGTAAGCATGATGTTCA+TGG | - | chr1.4:29821605-29821624 | None:intergenic | 40.0% |
| ! | TATGGGTTATTTATGGGTGG+TGG | + | chr1.4:29822733-29822752 | MS.gene073930:CDS | 40.0% |
| ! | TCGACCCTATGGGTTATTTA+TGG | + | chr1.4:29822726-29822745 | MS.gene073930:CDS | 40.0% |
| ! | TTCGGTTTTGCCTTTGCTTT+TGG | + | chr1.4:29821664-29821683 | MS.gene073930:CDS | 40.0% |
| !! | ATGCTTTGGTTTGGTTGGTA+TGG | + | chr1.4:29822129-29822148 | MS.gene073930:CDS | 40.0% |
| !! | CTTTCATGCTTTGGTTTGGT+TGG | + | chr1.4:29822124-29822143 | MS.gene073930:CDS | 40.0% |
| !! | TGAAGGTGTTCCAAAAGCAA+AGG | - | chr1.4:29821677-29821696 | None:intergenic | 40.0% |
| !! | TGGTGGTATTGCTGGTTTAT+GGG | + | chr1.4:29822005-29822024 | MS.gene073930:CDS | 40.0% |
| !! | TTATGGGGAGCACTTATTGA+AGG | + | chr1.4:29822021-29822040 | MS.gene073930:CDS | 40.0% |
| !! | TTGGTGGTATTGCTGGTTTA+TGG | + | chr1.4:29822004-29822023 | MS.gene073930:CDS | 40.0% |
| !!! | CTGTGGTTTCTCATTGGTTT+TGG | + | chr1.4:29821887-29821906 | MS.gene073930:CDS | 40.0% |
| !!! | GCTTTTGGAACACCTTCAAA+TGG | + | chr1.4:29821679-29821698 | MS.gene073930:CDS | 40.0% |
| !!! | GTTTCTCATTGGTTTTGGTC+CGG | + | chr1.4:29821892-29821911 | MS.gene073930:CDS | 40.0% |
| AAAGAATTCTCTCCGGTCAC+TGG | + | chr1.4:29822434-29822453 | MS.gene073930:CDS | 45.0% | |
| AACTGAACCAGCACAAAGCA+TGG | - | chr1.4:29821569-29821588 | None:intergenic | 45.0% | |
| AAGCAGCACAATTACACGGT+GGG | + | chr1.4:29822623-29822642 | MS.gene073930:CDS | 45.0% | |
| AGAATCTTGGTGAAGGAACC+AGG | - | chr1.4:29822162-29822181 | None:intergenic | 45.0% | |
| AGGACTGAGAATCTTGGTGA+AGG | - | chr1.4:29822169-29822188 | None:intergenic | 45.0% | |
| AGTGCCAAGAACAACAAGAG+AGG | - | chr1.4:29822106-29822125 | None:intergenic | 45.0% | |
| ATAAGCAAACCCACCATGTC+GGG | - | chr1.4:29822905-29822924 | None:intergenic | 45.0% | |
| ATCTGTAGTTGGAGTAGGAG+TGG | - | chr1.4:29822995-29823014 | None:intergenic | 45.0% | |
| ATTGGACGGTTCGATCATTC+TGG | + | chr1.4:29822051-29822070 | MS.gene073930:CDS | 45.0% | |
| CAGGTTTATCCGGGTAAACT+GGG | + | chr1.4:29822703-29822722 | MS.gene073930:CDS | 45.0% | |
| CATAAGCAAACCCACCATGT+CGG | - | chr1.4:29822906-29822925 | None:intergenic | 45.0% | |
| CTTATTGAAGGTCCGCGAAT+TGG | + | chr1.4:29822033-29822052 | MS.gene073930:CDS | 45.0% | |
| GAATCTTGGTGAAGGAACCA+GGG | - | chr1.4:29822161-29822180 | None:intergenic | 45.0% | |
| GAGTAATCCGTTGCAGACAT+CGG | - | chr1.4:29822467-29822486 | None:intergenic | 45.0% | |
| GCCAGCAAAATCAATGACTC+CGG | - | chr1.4:29821965-29821984 | None:intergenic | 45.0% | |
| GGCACTTTCATGCTTTGGTT+TGG | + | chr1.4:29822120-29822139 | MS.gene073930:CDS | 45.0% | |
| GTGTTCCGTTGTAGAACCTT+GGG | + | chr1.4:29822513-29822532 | MS.gene073930:CDS | 45.0% | |
| GTTTGACACTGCTGTGAACT+GGG | - | chr1.4:29821461-29821480 | None:intergenic | 45.0% | |
| TGAAGATGAACTTGCGGGTA+TGG | + | chr1.4:29822873-29822892 | MS.gene073930:CDS | 45.0% | |
| TGTTTGACACTGCTGTGAAC+TGG | - | chr1.4:29821462-29821481 | None:intergenic | 45.0% | |
| ! | CCCTATGGGTTATTTATGGG+TGG | + | chr1.4:29822730-29822749 | MS.gene073930:CDS | 45.0% |
| !! | AGTGCCTCTCTTGTTGTTCT+TGG | + | chr1.4:29822099-29822118 | MS.gene073930:CDS | 45.0% |
| !! | CAGCTCTAACGACACTTTTC+GGG | + | chr1.4:29822410-29822429 | MS.gene073930:CDS | 45.0% |
| !! | CATATGGTTGGTGGTATTGC+TGG | + | chr1.4:29821997-29822016 | MS.gene073930:CDS | 45.0% |
| !! | GATGTCTGCAACGGATTACT+CGG | + | chr1.4:29822466-29822485 | MS.gene073930:CDS | 45.0% |
| !! | GCAGCTCTAACGACACTTTT+CGG | + | chr1.4:29822409-29822428 | MS.gene073930:CDS | 45.0% |
| !! | GGTGGTATTGCTGGTTTATG+GGG | + | chr1.4:29822006-29822025 | MS.gene073930:CDS | 45.0% |
| !! | GGTGGTGGAGGGAAATTATT+AGG | + | chr1.4:29822748-29822767 | MS.gene073930:CDS | 45.0% |
| !! | GGTGTTGTTCATATGGTTGG+TGG | + | chr1.4:29821988-29822007 | MS.gene073930:CDS | 45.0% |
| !! | GGTTATTTATGGGTGGTGGA+GGG | + | chr1.4:29822737-29822756 | MS.gene073930:CDS | 45.0% |
| !! | TCCGGTGTTGTTCATATGGT+TGG | + | chr1.4:29821985-29822004 | MS.gene073930:CDS | 45.0% |
| !!! | ACCGGAGTCATTGATTTTGC+TGG | + | chr1.4:29821961-29821980 | MS.gene073930:CDS | 45.0% |
| !!! | GTCATTGATTTTGCTGGCTC+CGG | + | chr1.4:29821967-29821986 | MS.gene073930:CDS | 45.0% |
| !!! | TAATTTCTTTTAAATTTTTA+TGG | + | chr1.4:29822310-29822329 | MS.gene073930:intron | 5.0% |
| AAACAAAAGGTCCCCGGTGT+TGG | - | chr1.4:29821938-29821957 | None:intergenic | 50.0% | |
| AACGTGACCGATGTCTGCAA+CGG | + | chr1.4:29822457-29822476 | MS.gene073930:CDS | 50.0% | |
| AATCGCGTGCAACAAACTCG+CGG | + | chr1.4:29822573-29822592 | MS.gene073930:CDS | 50.0% | |
| AGGTTCTACAACGGAACACC+CGG | - | chr1.4:29822512-29822531 | None:intergenic | 50.0% | |
| ATGGATTTGACCCGACATGG+TGG | + | chr1.4:29822892-29822911 | MS.gene073930:CDS | 50.0% | |
| CCACATACAATTGCTGCCCA+AGG | - | chr1.4:29822532-29822551 | None:intergenic | 50.0% | |
| CCAGGTTTATCCGGGTAAAC+TGG | + | chr1.4:29822702-29822721 | MS.gene073930:CDS | 50.0% | |
| CCAGTTTACCCGGATAAACC+TGG | - | chr1.4:29822705-29822724 | None:intergenic | 50.0% | |
| CCTTGGGCAGCAATTGTATG+TGG | + | chr1.4:29822529-29822548 | MS.gene073930:CDS | 50.0% | |
| GAAGCAGCACAATTACACGG+TGG | + | chr1.4:29822622-29822641 | MS.gene073930:CDS | 50.0% | |
| GATGAAATTTGCCGCGGCTT+CGG | - | chr1.4:29821434-29821453 | None:intergenic | 50.0% | |
| GGGTGGGTAAGTGCAACTAT+GGG | + | chr1.4:29822802-29822821 | MS.gene073930:CDS | 50.0% | |
| GGTATGGATTTGACCCGACA+TGG | + | chr1.4:29822889-29822908 | MS.gene073930:CDS | 50.0% | |
| GGTGCAGATGAAATTTGCCG+CGG | - | chr1.4:29821440-29821459 | None:intergenic | 50.0% | |
| GGTGTTCCGTTGTAGAACCT+TGG | + | chr1.4:29822512-29822531 | MS.gene073930:CDS | 50.0% | |
| GTAAACTGGGTCGACCCTAT+GGG | + | chr1.4:29822716-29822735 | MS.gene073930:CDS | 50.0% | |
| TATCACCAGCGGCTCTATTG+CGG | + | chr1.4:29821804-29821823 | MS.gene073930:CDS | 50.0% | |
| TGATCGAACCGTCCAATTCG+CGG | - | chr1.4:29822048-29822067 | None:intergenic | 50.0% | |
| TGCTGCCCAAGGTTCTACAA+CGG | - | chr1.4:29822521-29822540 | None:intergenic | 50.0% | |
| TGGATTTGACCCGACATGGT+GGG | + | chr1.4:29822893-29822912 | MS.gene073930:CDS | 50.0% | |
| TGGGTGGGTAAGTGCAACTA+TGG | + | chr1.4:29822801-29822820 | MS.gene073930:CDS | 50.0% | |
| TTGAAGGTCCGCGAATTGGA+CGG | + | chr1.4:29822037-29822056 | MS.gene073930:CDS | 50.0% | |
| ! | AACACCGGGGACCTTTTGTT+TGG | + | chr1.4:29821937-29821956 | MS.gene073930:CDS | 50.0% |
| ! | AGCTGCGAAACAGAGCATTC+CGG | - | chr1.4:29821379-29821398 | None:intergenic | 50.0% |
| ! | CACAGGGTTTGTTTACCCTG+TGG | + | chr1.4:29821870-29821889 | MS.gene073930:CDS | 50.0% |
| ! | GGGTTATTTATGGGTGGTGG+AGG | + | chr1.4:29822736-29822755 | MS.gene073930:CDS | 50.0% |
| ! | GGTTGGTATGGTTTCAACCC+TGG | + | chr1.4:29822141-29822160 | MS.gene073930:CDS | 50.0% |
| ! | GGTTTTGCCATGCTTTGTGC+TGG | + | chr1.4:29821559-29821578 | MS.gene073930:CDS | 50.0% |
| ! | TGACTCCGGTGCCAAACAAA+AGG | - | chr1.4:29821951-29821970 | None:intergenic | 50.0% |
| !! | GTTTTGGTCCGGTGATGGTT+GGG | + | chr1.4:29821903-29821922 | MS.gene073930:CDS | 50.0% |
| !! | TGGCTCCGGTGTTGTTCATA+TGG | + | chr1.4:29821981-29822000 | MS.gene073930:CDS | 50.0% |
| !!! | CATTGGTTTTGGTCCGGTGA+TGG | + | chr1.4:29821898-29821917 | MS.gene073930:CDS | 50.0% |
| ATCGGTCACGTTCCAGTGAC+CGG | - | chr1.4:29822449-29822468 | None:intergenic | 55.0% | |
| GACGACATTAGCCGGTTGCA+CGG | + | chr1.4:29822387-29822406 | MS.gene073930:CDS | 55.0% | |
| GCACAATTACACGGTGGGTG+TGG | + | chr1.4:29822628-29822647 | MS.gene073930:CDS | 55.0% | |
| GGTAAACTGGGTCGACCCTA+TGG | + | chr1.4:29822715-29822734 | MS.gene073930:CDS | 55.0% | |
| GGTGCCAAACAAAAGGTCCC+CGG | - | chr1.4:29821944-29821963 | None:intergenic | 55.0% | |
| GTGCAACAAACTCGCGGAGA+AGG | + | chr1.4:29822579-29822598 | MS.gene073930:CDS | 55.0% | |
| TAGGGTCGACCCAGTTTACC+CGG | - | chr1.4:29822715-29822734 | None:intergenic | 55.0% | |
| TATGGGCAATGGAGTGCGGT+GGG | + | chr1.4:29822349-29822368 | MS.gene073930:CDS | 55.0% | |
| TTATGGGCAATGGAGTGCGG+TGG | + | chr1.4:29822348-29822367 | MS.gene073930:CDS | 55.0% | |
| TTCTACAACGGAACACCCGG+CGG | - | chr1.4:29822509-29822528 | None:intergenic | 55.0% | |
| !! | GCTTTTGCTATAGCAGCCGC+TGG | + | chr1.4:29821781-29821800 | MS.gene073930:CDS | 55.0% |
| !! | GGGGACCTTTTGTTTGGCAC+CGG | + | chr1.4:29821943-29821962 | MS.gene073930:CDS | 55.0% |
| !! | GGTTTTGGTCCGGTGATGGT+TGG | + | chr1.4:29821902-29821921 | MS.gene073930:CDS | 55.0% |
| !! | GTCTGCAACGGATTACTCGG+CGG | + | chr1.4:29822469-29822488 | MS.gene073930:CDS | 55.0% |
| AGAGCCGCTGGTGATACCAG+CGG | - | chr1.4:29821800-29821819 | None:intergenic | 60.0% | |
| ATGGGCAATGGAGTGCGGTG+GGG | + | chr1.4:29822350-29822369 | MS.gene073930:CDS | 60.0% | |
| CGATCATTCTGGTCGAGCCG+TGG | + | chr1.4:29822062-29822081 | MS.gene073930:CDS | 60.0% | |
| CGTTAGAGCTGCCGTGCAAC+CGG | - | chr1.4:29822401-29822420 | None:intergenic | 60.0% | |
| GCGGTGACGACGACATTAGC+CGG | + | chr1.4:29822379-29822398 | MS.gene073930:CDS | 60.0% | |
| GGTTTCGCTGCGATAACCGC+CGG | + | chr1.4:29822490-29822509 | MS.gene073930:CDS | 60.0% | |
| GTTTCGCTGCGATAACCGCC+GGG | + | chr1.4:29822491-29822510 | MS.gene073930:CDS | 60.0% | |
| TCGCAGCTCGCGCAGTTCAT+CGG | + | chr1.4:29821391-29821410 | MS.gene073930:CDS | 60.0% | |
| TCGTTCCGCAATAGAGCCGC+TGG | - | chr1.4:29821812-29821831 | None:intergenic | 60.0% | |
| TGCGCTAGCCCAACCATCAC+CGG | - | chr1.4:29821914-29821933 | None:intergenic | 60.0% | |
| ! | ACTGTGTCCGCGAAGTGCCA+CGG | - | chr1.4:29822082-29822101 | None:intergenic | 60.0% |
| !! | TGGGCTAGCGCAACCAACAC+CGG | + | chr1.4:29821922-29821941 | MS.gene073930:CDS | 60.0% |
| AACGTCCTCGACGCTGCTGC+TGG | + | chr1.4:29821622-29821641 | MS.gene073930:CDS | 65.0% | |
| ATGGAGTGCGGTGGGGAGGA+CGG | + | chr1.4:29822357-29822376 | MS.gene073930:CDS | 65.0% | |
| ATTTGCCGCGGCTTCGGCGT+TGG | - | chr1.4:29821428-29821447 | None:intergenic | 65.0% | |
| GCAGCCGCTGGTATCACCAG+CGG | + | chr1.4:29821793-29821812 | MS.gene073930:CDS | 65.0% | |
| GGCTAGCGCAACCAACACCG+GGG | + | chr1.4:29821924-29821943 | MS.gene073930:CDS | 65.0% | |
| ! | AGCAGCAGCGTCGAGGACGT+TGG | - | chr1.4:29821623-29821642 | None:intergenic | 65.0% |
| ! | GGGCTAGCGCAACCAACACC+GGG | + | chr1.4:29821923-29821942 | MS.gene073930:CDS | 65.0% |
| !! | CTTCGGCGTTGGTGGCGTTG+GGG | - | chr1.4:29821417-29821436 | None:intergenic | 65.0% |
| !! | GCTTCGGCGTTGGTGGCGTT+GGG | - | chr1.4:29821418-29821437 | None:intergenic | 65.0% |
| ACACGGTGGGTGTGGCGCGT+GGG | + | chr1.4:29822636-29822655 | MS.gene073930:CDS | 70.0% | |
| GGCAATGGAGTGCGGTGGGG+AGG | + | chr1.4:29822353-29822372 | MS.gene073930:CDS | 70.0% | |
| GGTCGAGCCGTGGCACTTCG+CGG | + | chr1.4:29822072-29822091 | MS.gene073930:CDS | 70.0% | |
| GTCCTCGACGCTGCTGCTGG+TGG | + | chr1.4:29821625-29821644 | MS.gene073930:CDS | 70.0% | |
| TACACGGTGGGTGTGGCGCG+TGG | + | chr1.4:29822635-29822654 | MS.gene073930:CDS | 70.0% | |
| !! | GGCTTCGGCGTTGGTGGCGT+TGG | - | chr1.4:29821419-29821438 | None:intergenic | 70.0% |
| CACGGTGGGTGTGGCGCGTG+GGG | + | chr1.4:29822637-29822656 | MS.gene073930:CDS | 75.0% | |
| CGCCACCAACGCCGAAGCCG+CGG | + | chr1.4:29821420-29821439 | MS.gene073930:CDS | 75.0% | |
| CGCCACCAGCAGCAGCGTCG+AGG | - | chr1.4:29821630-29821649 | None:intergenic | 75.0% | |
| GAGTGCGGTGGGGAGGACGG+CGG | + | chr1.4:29822360-29822379 | MS.gene073930:CDS | 75.0% | |
| ! | TGCCGCGGCTTCGGCGTTGG+TGG | - | chr1.4:29821425-29821444 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 29821367 | 29823020 | 29821367 | ID=MS.gene073930 |
| chr1.4 | mRNA | 29821367 | 29823020 | 29821367 | ID=MS.gene073930.t1;Parent=MS.gene073930 |
| chr1.4 | exon | 29821367 | 29822198 | 29821367 | ID=MS.gene073930.t1.exon1;Parent=MS.gene073930.t1 |
| chr1.4 | CDS | 29821367 | 29822198 | 29821367 | ID=cds.MS.gene073930.t1;Parent=MS.gene073930.t1 |
| chr1.4 | exon | 29822341 | 29823020 | 29822341 | ID=MS.gene073930.t1.exon2;Parent=MS.gene073930.t1 |
| chr1.4 | CDS | 29822341 | 29823020 | 29822341 | ID=cds.MS.gene073930.t1;Parent=MS.gene073930.t1 |
| Gene Sequence |
| Protein sequence |
