Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07605.t1 | XP_003590923.2 | 97.1 | 519 | 13 | 1 | 1 | 517 | 1 | 519 | 9.90E-274 | 952.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07605.t1 | O04161 | 77.6 | 504 | 106 | 4 | 2 | 501 | 3 | 503 | 1.1e-209 | 730.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07605.t1 | G7I667 | 97.1 | 519 | 13 | 1 | 1 | 517 | 1 | 519 | 7.1e-274 | 952.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058774 | MS.gene07605 | 0.857091 | 2.07E-62 | -1.69E-46 |
MS.gene058775 | MS.gene07605 | 0.843607 | 1.26E-58 | -1.69E-46 |
MS.gene058777 | MS.gene07605 | 0.830427 | 2.96E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene07605 | MS.gene23538 | PPI |
MS.gene061826 | MS.gene07605 | PPI |
MS.gene07605 | MS.gene064902 | PPI |
MS.gene018612 | MS.gene07605 | PPI |
MS.gene07605 | MS.gene072479 | PPI |
MS.gene07605 | MS.gene073930 | PPI |
MS.gene53559 | MS.gene07605 | PPI |
MS.gene07605 | MS.gene050886 | PPI |
MS.gene07605 | MS.gene29346 | PPI |
MS.gene07605 | MS.gene018613 | PPI |
MS.gene07605 | MS.gene09908 | PPI |
MS.gene07605 | MS.gene68389 | PPI |
MS.gene07605 | MS.gene78590 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07605.t1 | MTR_1g079760 | 97.303 | 519 | 12 | 1 | 1 | 517 | 1 | 519 | 0.0 | 1019 |
MS.gene07605.t1 | MTR_1g045550 | 72.888 | 509 | 124 | 6 | 1 | 504 | 1 | 500 | 0.0 | 736 |
MS.gene07605.t1 | MTR_7g098930 | 72.505 | 491 | 127 | 4 | 1 | 487 | 1 | 487 | 0.0 | 715 |
MS.gene07605.t1 | MTR_7g113340 | 71.837 | 490 | 128 | 5 | 1 | 485 | 1 | 485 | 0.0 | 704 |
MS.gene07605.t1 | MTR_3g463730 | 66.964 | 448 | 135 | 5 | 41 | 482 | 8 | 448 | 0.0 | 590 |
MS.gene07605.t1 | MTR_7g115050 | 28.827 | 392 | 209 | 16 | 112 | 477 | 100 | 447 | 2.90e-24 | 106 |
MS.gene07605.t1 | MTR_8g074750 | 26.022 | 465 | 276 | 17 | 47 | 484 | 30 | 453 | 4.20e-20 | 93.6 |
MS.gene07605.t1 | MTR_1g036410 | 24.841 | 471 | 275 | 17 | 47 | 482 | 24 | 450 | 7.21e-19 | 89.7 |
MS.gene07605.t1 | MTR_7g069640 | 26.667 | 495 | 290 | 16 | 47 | 505 | 22 | 479 | 1.61e-16 | 82.4 |
MS.gene07605.t1 | MTR_8g095040 | 25.581 | 473 | 285 | 14 | 47 | 485 | 29 | 468 | 2.92e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07605.t1 | AT1G64780 | 76.062 | 518 | 105 | 7 | 2 | 511 | 4 | 510 | 0.0 | 776 |
MS.gene07605.t1 | AT4G13510 | 73.930 | 514 | 116 | 8 | 4 | 512 | 1 | 501 | 0.0 | 756 |
MS.gene07605.t1 | AT3G24300 | 73.123 | 506 | 117 | 5 | 3 | 504 | 4 | 494 | 0.0 | 739 |
MS.gene07605.t1 | AT3G24290 | 74.948 | 483 | 110 | 5 | 3 | 481 | 4 | 479 | 0.0 | 721 |
MS.gene07605.t1 | AT4G28700 | 73.333 | 495 | 121 | 6 | 2 | 487 | 3 | 495 | 0.0 | 698 |
MS.gene07605.t1 | AT2G38290 | 26.190 | 462 | 288 | 14 | 47 | 486 | 20 | 450 | 1.22e-20 | 95.1 |
MS.gene07605.t1 | AT2G38290 | 27.019 | 359 | 224 | 11 | 135 | 486 | 7 | 334 | 3.36e-18 | 86.7 |
Find 197 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGTATGTTGATGAGATTTA+TGG | 0.166530 | 1.4:-64512681 | MS.gene07605:CDS |
GACGAGTCTATTAGGAAATT+AGG | 0.214176 | 1.4:-64512432 | MS.gene07605:CDS |
TTTGATTGGGCTTAATAAAT+TGG | 0.218891 | 1.4:-64512802 | MS.gene07605:CDS |
TAGGAAATTAGGGTTTATTA+TGG | 0.238047 | 1.4:-64512421 | MS.gene07605:CDS |
TTCGGCTTCGCTTTCGCCTT+TGG | 0.287554 | 1.4:-64513575 | MS.gene07605:CDS |
CGGTCGAATCGCCCTATTCT+AGG | 0.293247 | 1.4:+64513191 | None:intergenic |
GTTATTGACTTTGCCGGTTC+AGG | 0.294088 | 1.4:-64513269 | MS.gene07605:CDS |
GGGTGGTATAGCAGGGTTAT+GGG | 0.312935 | 1.4:-64513231 | MS.gene07605:CDS |
TCCGGTGTTATTGACTTTGC+CGG | 0.323221 | 1.4:-64513275 | MS.gene07605:CDS |
TATGGTCAATGGAGTGCTAT+TGG | 0.333213 | 1.4:-64513017 | MS.gene07605:CDS |
GTTGAGGTGTTGGTTATTTG+TGG | 0.337506 | 1.4:-64512597 | MS.gene07605:CDS |
AGGGAGGTTGTTTGCGGCGC+AGG | 0.338172 | 1.4:-64512622 | MS.gene07605:CDS |
CACATGGTGGGTGGTATAGC+AGG | 0.340009 | 1.4:-64513239 | MS.gene07605:CDS |
CACGGAGGGTGCGGTGCATG+GGG | 0.340968 | 1.4:-64512735 | MS.gene07605:CDS |
AGGAAGATGACGAGTCTATT+AGG | 0.343254 | 1.4:-64512440 | MS.gene07605:CDS |
ATATATTCTTCTTTCTTAAC+CGG | 0.346432 | 1.4:-64513386 | MS.gene07605:CDS |
ACGAGTCTATTAGGAAATTA+GGG | 0.347347 | 1.4:-64512431 | MS.gene07605:CDS |
TGTAACTGCGCAGCCTCTAA+TGG | 0.347657 | 1.4:+64512756 | None:intergenic |
TACACGGAGGGTGCGGTGCA+TGG | 0.352401 | 1.4:-64512737 | MS.gene07605:CDS |
CCATCGTTTCGCATTGGGTT+TGG | 0.355981 | 1.4:-64513352 | MS.gene07605:CDS |
ACACGGAGGGTGCGGTGCAT+GGG | 0.356133 | 1.4:-64512736 | MS.gene07605:CDS |
AGGGATTACCCTTCACCTTC+CGG | 0.361786 | 1.4:-64513509 | MS.gene07605:CDS |
TAGCGCGTCGTTGGTGGTGT+TGG | 0.373610 | 1.4:-64513138 | MS.gene07605:CDS |
GGATTGTTGATGGGTGGTGG+AGG | 0.374838 | 1.4:-64512642 | MS.gene07605:CDS |
ATTTGAGATGGTGTTGAATT+GGG | 0.384973 | 1.4:+64513781 | None:intergenic |
AGTATGTTGATGAGATTTAT+GGG | 0.385179 | 1.4:-64512680 | MS.gene07605:CDS |
TTACCCCATCGTTTCGCATT+GGG | 0.385239 | 1.4:-64513357 | MS.gene07605:CDS |
TAACAACTTTGTTTAGTAAA+CGG | 0.393569 | 1.4:-64512950 | MS.gene07605:CDS |
TTTATAGAAGGTCCTAGAAT+AGG | 0.393823 | 1.4:-64513203 | MS.gene07605:CDS |
TTTAGTAAACGGTTATTAGT+TGG | 0.394285 | 1.4:-64512939 | MS.gene07605:CDS |
ATATGAGATATGCCACGAAT+TGG | 0.394904 | 1.4:+64513405 | None:intergenic |
TATTTGAGATGGTGTTGAAT+TGG | 0.400022 | 1.4:+64513780 | None:intergenic |
GACGTGTGTAACGGTTTACT+TGG | 0.402700 | 1.4:-64512906 | MS.gene07605:CDS |
GGTTTGGTCTGCCGATGGTT+GGG | 0.403385 | 1.4:-64513336 | MS.gene07605:CDS |
TTGAGGTGTTGGTTATTTGT+GGG | 0.404299 | 1.4:-64512596 | MS.gene07605:CDS |
TGGGTGGTATAGCAGGGTTA+TGG | 0.404483 | 1.4:-64513232 | MS.gene07605:CDS |
AGTAACAAAAGGAATTATTA+TGG | 0.405005 | 1.4:-64513035 | MS.gene07605:CDS |
CGGAGGGTGCGGTGCATGGG+GGG | 0.405574 | 1.4:-64512733 | MS.gene07605:CDS |
TTGCAGTGGTGGTGAGGAGT+GGG | 0.407639 | 1.4:+64513834 | None:intergenic |
CATGTGAACCACACCTGAAC+CGG | 0.411513 | 1.4:+64513256 | None:intergenic |
TATTATGGTTTGGTTGGTAC+GGG | 0.415535 | 1.4:-64513106 | MS.gene07605:CDS |
AGGAAATTAGGGTTTATTAT+GGG | 0.422494 | 1.4:-64512420 | MS.gene07605:CDS |
TTATTATGGTTTGGTTGGTA+CGG | 0.423451 | 1.4:-64513107 | MS.gene07605:CDS |
AGGTGTTGGTTATTTGTGGG+TGG | 0.427283 | 1.4:-64512593 | MS.gene07605:CDS |
CATCACCATCGGTTCGCGTT+GGG | 0.427874 | 1.4:+64513309 | None:intergenic |
GTGGTATAGCAGGGTTATGG+GGG | 0.427928 | 1.4:-64513229 | MS.gene07605:CDS |
ATGCAACAGACCGGCCTGTC+CGG | 0.429149 | 1.4:+64513171 | None:intergenic |
AGCGCGTCGTTGGTGGTGTT+GGG | 0.430363 | 1.4:-64513137 | MS.gene07605:CDS |
ACCATCGGTTCGCGTTGGGC+TGG | 0.431435 | 1.4:+64513313 | None:intergenic |
ATAAGCTGAGAAGAGAAGAT+AGG | 0.432230 | 1.4:+64513724 | None:intergenic |
GTCAGTGAGTTTATTTGAGA+TGG | 0.433333 | 1.4:+64513769 | None:intergenic |
GGTGTTGGTTATTTGTGGGT+GGG | 0.433759 | 1.4:-64512592 | MS.gene07605:CDS |
ACGGAGGGTGCGGTGCATGG+GGG | 0.434614 | 1.4:-64512734 | MS.gene07605:CDS |
AAAGGAATTATTATGGTCAA+TGG | 0.435762 | 1.4:-64513028 | MS.gene07605:CDS |
TGTTGATGGGTGGTGGAGGG+AGG | 0.437827 | 1.4:-64512638 | MS.gene07605:CDS |
CAGCGATGGCGAAGGCCCAT+TGG | 0.442094 | 1.4:+64513465 | None:intergenic |
GAGGCCGTATGGATTGTTGA+TGG | 0.443279 | 1.4:-64512652 | MS.gene07605:CDS |
GGCCTCTCCTACTATCTCTT+CGG | 0.447262 | 1.4:-64513593 | MS.gene07605:CDS |
GGCGCAGGTGGTTGAGGTGT+TGG | 0.450580 | 1.4:-64512607 | MS.gene07605:CDS |
CACACTGAAGGTGCACTGAT+TGG | 0.453333 | 1.4:+64512339 | None:intergenic |
TTTACCCCATCGTTTCGCAT+TGG | 0.453403 | 1.4:-64513358 | MS.gene07605:CDS |
GGTGGTATAGCAGGGTTATG+GGG | 0.457348 | 1.4:-64513230 | MS.gene07605:CDS |
TATGAGATATGCCACGAATT+GGG | 0.458451 | 1.4:+64513406 | None:intergenic |
TTATAGAAGGTCCTAGAATA+GGG | 0.458590 | 1.4:-64513202 | MS.gene07605:CDS |
GCCTTCGCCATCGCTGCTGC+CGG | 0.459814 | 1.4:-64513458 | MS.gene07605:CDS |
TGGTGGTGAGGAGTGGGGCG+AGG | 0.461907 | 1.4:+64513840 | None:intergenic |
GATTGTTGATGGGTGGTGGA+GGG | 0.464090 | 1.4:-64512641 | MS.gene07605:CDS |
GGGTTTGGTCTGCCGATGGT+TGG | 0.467295 | 1.4:-64513337 | MS.gene07605:CDS |
GTTTGCGGCGCAGGTGGTTG+AGG | 0.472995 | 1.4:-64512613 | MS.gene07605:CDS |
CTAGAATAGGGCGATTCGAC+CGG | 0.474874 | 1.4:-64513190 | MS.gene07605:CDS |
TGGTGGAGGGAGGTTGTTTG+CGG | 0.475634 | 1.4:-64512628 | MS.gene07605:CDS |
GTGTGGGTTTGTTGCGGCGT+GGG | 0.479169 | 1.4:-64512826 | MS.gene07605:CDS |
GTTGTTCTGTTGTGGAACCA+TGG | 0.481083 | 1.4:-64512860 | MS.gene07605:CDS |
GGCGGTAGCGTTTGCAGTGG+TGG | 0.482310 | 1.4:+64513823 | None:intergenic |
GTTGATGAGATTTATGGGTC+CGG | 0.482350 | 1.4:-64512675 | MS.gene07605:CDS |
GAGGAGTGGGGCGAGGTCTG+TGG | 0.484837 | 1.4:+64513847 | None:intergenic |
GGTTTCGCCATGCTCTGTGC+CGG | 0.485990 | 1.4:-64513680 | MS.gene07605:CDS |
AACGATGGGGTAAACAAAAC+CGG | 0.487884 | 1.4:+64513367 | None:intergenic |
CGTTGGGCTGGCCCAACCAT+CGG | 0.489504 | 1.4:+64513325 | None:intergenic |
TATGGGTCCGGGAGGCCGTA+TGG | 0.489869 | 1.4:-64512663 | MS.gene07605:CDS |
TTTACGGGATTGTTTGCAAA+GGG | 0.491383 | 1.4:-64512705 | MS.gene07605:CDS |
TCTCTCTGCAATGGAGCCAC+TGG | 0.496625 | 1.4:+64513430 | None:intergenic |
TCAGGTGTGGTTCACATGGT+GGG | 0.496702 | 1.4:-64513251 | MS.gene07605:CDS |
ACAGCTTCTTTCTCTACCAA+TGG | 0.497981 | 1.4:-64513481 | MS.gene07605:CDS |
TGTATCGTGTCCGGTGGCAG+AGG | 0.501134 | 1.4:+64512368 | None:intergenic |
CCATGGGCCGCGATTGTGTG+TGG | 0.504024 | 1.4:-64512843 | MS.gene07605:CDS |
GAAGTATGATGATCCATTAG+AGG | 0.505151 | 1.4:-64512769 | MS.gene07605:CDS |
TTGATGAGATTTATGGGTCC+GGG | 0.505912 | 1.4:-64512674 | MS.gene07605:CDS |
ATTGGTGAGCATGATGTTCA+TGG | 0.505916 | 1.4:+64513637 | None:intergenic |
CATTGGGTTTGGTCTGCCGA+TGG | 0.506434 | 1.4:-64513341 | MS.gene07605:CDS |
AGTGTCACAACGACATTGGC+TGG | 0.508487 | 1.4:-64512987 | MS.gene07605:CDS |
TATGGATTGTTGATGGGTGG+TGG | 0.508513 | 1.4:-64512645 | MS.gene07605:CDS |
GAGGTTGTTTGCGGCGCAGG+TGG | 0.508529 | 1.4:-64512619 | MS.gene07605:CDS |
GAAAGGACATAGCGCGTCGT+TGG | 0.508596 | 1.4:-64513147 | MS.gene07605:CDS |
TCGAGGGATGATGAGACTGC+AGG | 0.509046 | 1.4:-64512510 | MS.gene07605:CDS |
TGCAGAGAGAACCCAATTCG+TGG | 0.511335 | 1.4:-64513417 | MS.gene07605:CDS |
TACGGGATTGTTTGCAAAGG+GGG | 0.512801 | 1.4:-64512703 | MS.gene07605:CDS |
GTGTGTAACGGTTTACTTGG+CGG | 0.514764 | 1.4:-64512903 | MS.gene07605:CDS |
CAGCTTCTTTCTCTACCAAT+GGG | 0.516999 | 1.4:-64513480 | MS.gene07605:CDS |
AACTGCAGGTTGTTCTGTTG+TGG | 0.517299 | 1.4:-64512868 | MS.gene07605:CDS |
ATGGAAATATGAGTAACAAA+AGG | 0.518100 | 1.4:-64513046 | MS.gene07605:CDS |
GGCCGGTCTGTTGCATTGAA+AGG | 0.519192 | 1.4:-64513164 | MS.gene07605:CDS |
GAGAAAGAAGCTGTAGTCAC+CGG | 0.520220 | 1.4:+64513490 | None:intergenic |
AATGGAGCCACTGGTGATAC+CGG | 0.521341 | 1.4:+64513439 | None:intergenic |
GCCTTTGGAGCACCCTCCAA+TGG | 0.524193 | 1.4:-64513560 | MS.gene07605:CDS |
TTTGCAGTGGTGGTGAGGAG+TGG | 0.524547 | 1.4:+64513833 | None:intergenic |
GCACCCTCCAATGGTTTCAT+CGG | 0.528576 | 1.4:-64513551 | MS.gene07605:CDS |
AATGTCCTCGACGCTGCAGC+CGG | 0.530902 | 1.4:-64513617 | MS.gene07605:CDS |
TGGTATAGCAGGGTTATGGG+GGG | 0.532932 | 1.4:-64513228 | MS.gene07605:CDS |
GCGCAGTTACACGGAGGGTG+CGG | 0.534032 | 1.4:-64512744 | MS.gene07605:CDS |
CGGTTCAGGTGTGGTTCACA+TGG | 0.537956 | 1.4:-64513255 | MS.gene07605:CDS |
ACCATTGGAGGGTGCTCCAA+AGG | 0.539068 | 1.4:+64513559 | None:intergenic |
AACAGAGCCGGCACAGAGCA+TGG | 0.539811 | 1.4:+64513673 | None:intergenic |
AGGCCGTATGGATTGTTGAT+GGG | 0.540097 | 1.4:-64512651 | MS.gene07605:CDS |
CTGTAGTCACCGGAAGGTGA+AGG | 0.546826 | 1.4:+64513500 | None:intergenic |
CAACAATCCATACGGCCTCC+CGG | 0.547364 | 1.4:+64512656 | None:intergenic |
ACATCACCATCGGTTCGCGT+TGG | 0.547798 | 1.4:+64513308 | None:intergenic |
GGTTGGTACGGGTTCAACCC+CGG | 0.549923 | 1.4:-64513095 | MS.gene07605:CDS |
ATAGGGCGATTCGACCGGAC+AGG | 0.550537 | 1.4:-64513185 | MS.gene07605:CDS |
TTAGTCTTCGCCATGCAGCT+TGG | 0.551508 | 1.4:-64513701 | MS.gene07605:CDS |
GAGGGAGACACACTCGTGGC+CGG | 0.551918 | 1.4:+64512387 | None:intergenic |
GGCGATTCGACCGGACAGGC+CGG | 0.554425 | 1.4:-64513181 | MS.gene07605:CDS |
GTCCTCGACGCTGCAGCCGG+TGG | 0.554837 | 1.4:-64513614 | MS.gene07605:CDS |
AGGACATAGCGCGTCGTTGG+TGG | 0.555347 | 1.4:-64513144 | MS.gene07605:CDS |
AGTGTGTCTCCCTCTGCCAC+CGG | 0.555628 | 1.4:-64512378 | MS.gene07605:CDS |
TGGCACCGGTGTATCGTGTC+CGG | 0.556207 | 1.4:+64512359 | None:intergenic |
TTCAGGTGTGGTTCACATGG+TGG | 0.556560 | 1.4:-64513252 | MS.gene07605:CDS |
GCCAGCCCAACGCGAACCGA+TGG | 0.556829 | 1.4:-64513314 | MS.gene07605:CDS |
GGATGATGAGACTGCAGGGA+TGG | 0.557751 | 1.4:-64512505 | MS.gene07605:CDS |
GGTGATACCGGCAGCAGCGA+TGG | 0.559774 | 1.4:+64513451 | None:intergenic |
GTTTACGGGATTGTTTGCAA+AGG | 0.562175 | 1.4:-64512706 | MS.gene07605:CDS |
AGCGAAGCCGAAGAGATAGT+AGG | 0.563480 | 1.4:+64513586 | None:intergenic |
ACCGGCAGCAGCGATGGCGA+AGG | 0.564745 | 1.4:+64513457 | None:intergenic |
TGAAATTGTTGAGGATATCG+AGG | 0.567161 | 1.4:-64512527 | MS.gene07605:CDS |
TATTATGGGTAGGATTGAGC+CGG | 0.567782 | 1.4:-64512406 | MS.gene07605:CDS |
TTATTCAGCCCATAAAATAA+CGG | 0.567889 | 1.4:+64512552 | None:intergenic |
AACGGTTATTAGTTGGACAC+TGG | 0.568051 | 1.4:-64512932 | MS.gene07605:CDS |
CAAACCCAATGCGAAACGAT+GGG | 0.569510 | 1.4:+64513353 | None:intergenic |
GTCCTTTCAATGCAACAGAC+CGG | 0.570037 | 1.4:+64513162 | None:intergenic |
TGGTGTTGAATTGGGTGCAT+AGG | 0.570282 | 1.4:+64513789 | None:intergenic |
CATGGCGAAACCAAGCTGCA+TGG | 0.574623 | 1.4:+64513691 | None:intergenic |
GAATTGGGTTCTCTCTGCAA+TGG | 0.575318 | 1.4:+64513421 | None:intergenic |
GGCTGCAGCGTCGAGGACAT+TGG | 0.575668 | 1.4:+64513619 | None:intergenic |
TTGTTCTGTTGTGGAACCAT+GGG | 0.576456 | 1.4:-64512859 | MS.gene07605:CDS |
CCAAACCCAATGCGAAACGA+TGG | 0.576636 | 1.4:+64513352 | None:intergenic |
GTATCGTGTCCGGTGGCAGA+GGG | 0.577389 | 1.4:+64512369 | None:intergenic |
TGACTTTGCCGGTTCAGGTG+TGG | 0.579151 | 1.4:-64513264 | MS.gene07605:CDS |
TAGCGTTTGCAGTGGTGGTG+AGG | 0.579196 | 1.4:+64513828 | None:intergenic |
GTGGCGGCCGATGAAACCAT+TGG | 0.579590 | 1.4:+64513544 | None:intergenic |
GGTGTTGTCTATTGCATAGG+TGG | 0.580209 | 1.4:+64513745 | None:intergenic |
TTAGAGGCTGCGCAGTTACA+CGG | 0.582164 | 1.4:-64512753 | MS.gene07605:CDS |
AATTAGGGTTTATTATGGGT+AGG | 0.582942 | 1.4:-64512416 | MS.gene07605:CDS |
AACAAGTGTCACAACGACAT+TGG | 0.584782 | 1.4:-64512991 | MS.gene07605:CDS |
TGTAGTCACCGGAAGGTGAA+GGG | 0.585601 | 1.4:+64513501 | None:intergenic |
CATGGGCCGCGATTGTGTGT+GGG | 0.586850 | 1.4:-64512842 | MS.gene07605:CDS |
CCCAAATAAAACATCACCAT+CGG | 0.587790 | 1.4:+64513298 | None:intergenic |
ATAGGTGTTGTCTATTGCAT+AGG | 0.589178 | 1.4:+64513742 | None:intergenic |
CGAGGGATGATGAGACTGCA+GGG | 0.589259 | 1.4:-64512509 | MS.gene07605:CDS |
TGAATAAGATGAAATTGTTG+AGG | 0.592343 | 1.4:-64512536 | MS.gene07605:CDS |
AACAAACCCACACACAATCG+CGG | 0.593035 | 1.4:+64512836 | None:intergenic |
GCATAGGTAGTCTGCAACGG+CGG | 0.597113 | 1.4:+64513805 | None:intergenic |
AGCCGAAGAGATAGTAGGAG+AGG | 0.597353 | 1.4:+64513591 | None:intergenic |
CCACCCATCAACAATCCATA+CGG | 0.604211 | 1.4:+64512648 | None:intergenic |
GAGATAGTAGGAGAGGCCAC+CGG | 0.607346 | 1.4:+64513598 | None:intergenic |
TGCAGTGGTGGTGAGGAGTG+GGG | 0.607421 | 1.4:+64513835 | None:intergenic |
CCACACACAATCGCGGCCCA+TGG | 0.607906 | 1.4:+64512843 | None:intergenic |
CGGCCGATGAAACCATTGGA+GGG | 0.608253 | 1.4:+64513548 | None:intergenic |
GCGGCCGATGAAACCATTGG+AGG | 0.609997 | 1.4:+64513547 | None:intergenic |
CCGTATGGATTGTTGATGGG+TGG | 0.612064 | 1.4:-64512648 | MS.gene07605:CDS |
GGTGTGGTTCACATGGTGGG+TGG | 0.612109 | 1.4:-64513248 | MS.gene07605:CDS |
AAATAACGGCACCATTGTGA+CGG | 0.614051 | 1.4:+64512566 | None:intergenic |
GCTGCTGCCGGTATCACCAG+TGG | 0.615421 | 1.4:-64513446 | MS.gene07605:CDS |
TGTGTGGGTTTGTTGCGGCG+TGG | 0.623345 | 1.4:-64512827 | MS.gene07605:CDS |
TGGACTTGACTAGACATGGT+GGG | 0.625359 | 1.4:-64512485 | MS.gene07605:CDS |
GATTGTGTGTGGGTTTGTTG+CGG | 0.627273 | 1.4:-64512832 | MS.gene07605:CDS |
TGCCACCGGACACGATACAC+CGG | 0.628233 | 1.4:-64512364 | MS.gene07605:CDS |
CACCGGTGTATCGTGTCCGG+TGG | 0.628689 | 1.4:+64512362 | None:intergenic |
GGTGCATAGGTAGTCTGCAA+CGG | 0.633576 | 1.4:+64513802 | None:intergenic |
GAAATTGTTGAGGATATCGA+GGG | 0.633706 | 1.4:-64512526 | MS.gene07605:CDS |
CACTGGAATGACGTGTGTAA+CGG | 0.636365 | 1.4:-64512915 | MS.gene07605:CDS |
TGCTTATGCGTATCATGACG+AGG | 0.643185 | 1.4:-64512460 | MS.gene07605:CDS |
GAAGGTGCACTGATTGGCAC+CGG | 0.646404 | 1.4:+64512345 | None:intergenic |
GGCCACCGGCTGCAGCGTCG+AGG | 0.648352 | 1.4:+64513612 | None:intergenic |
AGGCTGCGCAGTTACACGGA+GGG | 0.649107 | 1.4:-64512749 | MS.gene07605:CDS |
AAGAAGCTGTAGTCACCGGA+AGG | 0.653398 | 1.4:+64513494 | None:intergenic |
AACGGCGGTAGCGTTTGCAG+TGG | 0.660892 | 1.4:+64513820 | None:intergenic |
ACATGGTGGGTGGTATAGCA+GGG | 0.662991 | 1.4:-64513238 | MS.gene07605:CDS |
ACCGGCAAAGTCAATAACAC+CGG | 0.670560 | 1.4:+64513274 | None:intergenic |
TGGGTGGGTTACCGTCACAA+TGG | 0.675313 | 1.4:-64512577 | MS.gene07605:CDS |
AAACCCAATGCGAAACGATG+GGG | 0.679819 | 1.4:+64513354 | None:intergenic |
TCGTGATGATATCACACTGA+AGG | 0.680385 | 1.4:+64512327 | None:intergenic |
GGCAGAGGGAGACACACTCG+TGG | 0.689003 | 1.4:+64512383 | None:intergenic |
ATGAGATTTATGGGTCCGGG+AGG | 0.689021 | 1.4:-64512671 | MS.gene07605:CDS |
GGGATGGACTTGACTAGACA+TGG | 0.695287 | 1.4:-64512489 | MS.gene07605:CDS |
ATGGACTTGACTAGACATGG+TGG | 0.698702 | 1.4:-64512486 | MS.gene07605:CDS |
TTACGGGATTGTTTGCAAAG+GGG | 0.721445 | 1.4:-64512704 | MS.gene07605:CDS |
GAGGCTGCGCAGTTACACGG+AGG | 0.735378 | 1.4:-64512750 | MS.gene07605:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTAACAAAAGGAATTATTA+TGG | - | chr1.4:64513172-64513191 | MS.gene07605:CDS | 20.0% |
!! | ATATATTCTTCTTTCTTAAC+CGG | - | chr1.4:64512821-64512840 | MS.gene07605:CDS | 20.0% |
!!! | TAACAACTTTGTTTAGTAAA+CGG | - | chr1.4:64513257-64513276 | MS.gene07605:CDS | 20.0% |
! | AAAGGAATTATTATGGTCAA+TGG | - | chr1.4:64513179-64513198 | MS.gene07605:CDS | 25.0% |
! | AGGAAATTAGGGTTTATTAT+GGG | - | chr1.4:64513787-64513806 | MS.gene07605:CDS | 25.0% |
! | ATGGAAATATGAGTAACAAA+AGG | - | chr1.4:64513161-64513180 | MS.gene07605:CDS | 25.0% |
! | TAGGAAATTAGGGTTTATTA+TGG | - | chr1.4:64513786-64513805 | MS.gene07605:CDS | 25.0% |
! | TGAATAAGATGAAATTGTTG+AGG | - | chr1.4:64513671-64513690 | MS.gene07605:CDS | 25.0% |
! | TGCAATTGTTAAAAATGAAC+CGG | + | chr1.4:64513134-64513153 | None:intergenic | 25.0% |
! | TTAACAATTGCAAAAAGCTA+TGG | - | chr1.4:64513142-64513161 | MS.gene07605:CDS | 25.0% |
! | TTATTCAGCCCATAAAATAA+CGG | + | chr1.4:64513658-64513677 | None:intergenic | 25.0% |
! | TTTAGTAAACGGTTATTAGT+TGG | - | chr1.4:64513268-64513287 | MS.gene07605:CDS | 25.0% |
! | TTTGATTGGGCTTAATAAAT+TGG | - | chr1.4:64513405-64513424 | MS.gene07605:CDS | 25.0% |
!! | AGTATGTTGATGAGATTTAT+GGG | - | chr1.4:64513527-64513546 | MS.gene07605:CDS | 25.0% |
!!! | CTTTTTTATTATGGTTTGGT+TGG | - | chr1.4:64513095-64513114 | MS.gene07605:CDS | 25.0% |
!!! | GGTTCTTTTTTATTATGGTT+TGG | - | chr1.4:64513091-64513110 | MS.gene07605:CDS | 25.0% |
!!! | TGTTGGGTTCTTTTTTATTA+TGG | - | chr1.4:64513086-64513105 | MS.gene07605:CDS | 25.0% |
AATTAGGGTTTATTATGGGT+AGG | - | chr1.4:64513791-64513810 | MS.gene07605:CDS | 30.0% | |
ACGAGTCTATTAGGAAATTA+GGG | - | chr1.4:64513776-64513795 | MS.gene07605:CDS | 30.0% | |
CAATTGTTAAAAATGAACCG+GGG | + | chr1.4:64513132-64513151 | None:intergenic | 30.0% | |
GCAATTGTTAAAAATGAACC+GGG | + | chr1.4:64513133-64513152 | None:intergenic | 30.0% | |
TTATAGAAGGTCCTAGAATA+GGG | - | chr1.4:64513005-64513024 | MS.gene07605:CDS | 30.0% | |
TTTATAGAAGGTCCTAGAAT+AGG | - | chr1.4:64513004-64513023 | MS.gene07605:CDS | 30.0% | |
! | ATTTGAGATGGTGTTGAATT+GGG | + | chr1.4:64512429-64512448 | None:intergenic | 30.0% |
! | GAGTATGTTGATGAGATTTA+TGG | - | chr1.4:64513526-64513545 | MS.gene07605:CDS | 30.0% |
! | TATTTGAGATGGTGTTGAAT+TGG | + | chr1.4:64512430-64512449 | None:intergenic | 30.0% |
!! | TTATTATGGTTTGGTTGGTA+CGG | - | chr1.4:64513100-64513119 | MS.gene07605:CDS | 30.0% |
ATAAGCTGAGAAGAGAAGAT+AGG | + | chr1.4:64512486-64512505 | None:intergenic | 35.0% | |
ATATGAGATATGCCACGAAT+TGG | + | chr1.4:64512805-64512824 | None:intergenic | 35.0% | |
CCCAAATAAAACATCACCAT+CGG | + | chr1.4:64512912-64512931 | None:intergenic | 35.0% | |
GAAATTGTTGAGGATATCGA+GGG | - | chr1.4:64513681-64513700 | MS.gene07605:CDS | 35.0% | |
GAAGTATGATGATCCATTAG+AGG | - | chr1.4:64513438-64513457 | MS.gene07605:CDS | 35.0% | |
GACGAGTCTATTAGGAAATT+AGG | - | chr1.4:64513775-64513794 | MS.gene07605:CDS | 35.0% | |
GTCAGTGAGTTTATTTGAGA+TGG | + | chr1.4:64512441-64512460 | None:intergenic | 35.0% | |
TATGAGATATGCCACGAATT+GGG | + | chr1.4:64512804-64512823 | None:intergenic | 35.0% | |
TGAAATTGTTGAGGATATCG+AGG | - | chr1.4:64513680-64513699 | MS.gene07605:CDS | 35.0% | |
TTTACGGGATTGTTTGCAAA+GGG | - | chr1.4:64513502-64513521 | MS.gene07605:CDS | 35.0% | |
! | ATAGGTGTTGTCTATTGCAT+AGG | + | chr1.4:64512468-64512487 | None:intergenic | 35.0% |
! | CATGATGTTCATGGTGTTTT+TGG | + | chr1.4:64512564-64512583 | None:intergenic | 35.0% |
!! | ACCGATGGTGATGTTTTATT+TGG | - | chr1.4:64512908-64512927 | MS.gene07605:CDS | 35.0% |
!! | TATTATGGTTTGGTTGGTAC+GGG | - | chr1.4:64513101-64513120 | MS.gene07605:CDS | 35.0% |
!! | TTGAGGTGTTGGTTATTTGT+GGG | - | chr1.4:64513611-64513630 | MS.gene07605:CDS | 35.0% |
!!! | ACAATGGTGCCGTTATTTTA+TGG | - | chr1.4:64513646-64513665 | MS.gene07605:CDS | 35.0% |
!!! | CAATGGTGCCGTTATTTTAT+GGG | - | chr1.4:64513647-64513666 | MS.gene07605:CDS | 35.0% |
!!! | CCGATGGTGATGTTTTATTT+GGG | - | chr1.4:64512909-64512928 | MS.gene07605:CDS | 35.0% |
AAATAACGGCACCATTGTGA+CGG | + | chr1.4:64513644-64513663 | None:intergenic | 40.0% | |
AACAAGTGTCACAACGACAT+TGG | - | chr1.4:64513216-64513235 | MS.gene07605:CDS | 40.0% | |
AACGATGGGGTAAACAAAAC+CGG | + | chr1.4:64512843-64512862 | None:intergenic | 40.0% | |
AACGGTTATTAGTTGGACAC+TGG | - | chr1.4:64513275-64513294 | MS.gene07605:CDS | 40.0% | |
AATCCCTTAGACCGAAAAAG+TGG | + | chr1.4:64512685-64512704 | None:intergenic | 40.0% | |
ACAGCTTCTTTCTCTACCAA+TGG | - | chr1.4:64512726-64512745 | MS.gene07605:CDS | 40.0% | |
AGGAAGATGACGAGTCTATT+AGG | - | chr1.4:64513767-64513786 | MS.gene07605:CDS | 40.0% | |
ATTGGTGAGCATGATGTTCA+TGG | + | chr1.4:64512573-64512592 | None:intergenic | 40.0% | |
CAGCTTCTTTCTCTACCAAT+GGG | - | chr1.4:64512727-64512746 | MS.gene07605:CDS | 40.0% | |
GTTTACGGGATTGTTTGCAA+AGG | - | chr1.4:64513501-64513520 | MS.gene07605:CDS | 40.0% | |
TATTATGGGTAGGATTGAGC+CGG | - | chr1.4:64513801-64513820 | MS.gene07605:CDS | 40.0% | |
TTACGGGATTGTTTGCAAAG+GGG | - | chr1.4:64513503-64513522 | MS.gene07605:CDS | 40.0% | |
TTGATGAGATTTATGGGTCC+GGG | - | chr1.4:64513533-64513552 | MS.gene07605:CDS | 40.0% | |
TTGTTCTGTTGTGGAACCAT+GGG | - | chr1.4:64513348-64513367 | MS.gene07605:CDS | 40.0% | |
! | GTTGATGAGATTTATGGGTC+CGG | - | chr1.4:64513532-64513551 | MS.gene07605:CDS | 40.0% |
! | TATGGTCAATGGAGTGCTAT+TGG | - | chr1.4:64513190-64513209 | MS.gene07605:CDS | 40.0% |
!! | GTTGAGGTGTTGGTTATTTG+TGG | - | chr1.4:64513610-64513629 | MS.gene07605:CDS | 40.0% |
!! | TTATGGGGGGCATTTATAGA+AGG | - | chr1.4:64512992-64513011 | MS.gene07605:CDS | 40.0% |
!!! | GGTGATGTTTTATTTGGGTC+CGG | - | chr1.4:64512914-64512933 | MS.gene07605:CDS | 40.0% |
AAACCCAATGCGAAACGATG+GGG | + | chr1.4:64512856-64512875 | None:intergenic | 45.0% | |
AACAAACCCACACACAATCG+CGG | + | chr1.4:64513374-64513393 | None:intergenic | 45.0% | |
AACTGCAGGTTGTTCTGTTG+TGG | - | chr1.4:64513339-64513358 | MS.gene07605:CDS | 45.0% | |
ACCGGCAAAGTCAATAACAC+CGG | + | chr1.4:64512936-64512955 | None:intergenic | 45.0% | |
ATGGACTTGACTAGACATGG+TGG | - | chr1.4:64513721-64513740 | MS.gene07605:CDS | 45.0% | |
CAAACCCAATGCGAAACGAT+GGG | + | chr1.4:64512857-64512876 | None:intergenic | 45.0% | |
CACTGGAATGACGTGTGTAA+CGG | - | chr1.4:64513292-64513311 | MS.gene07605:CDS | 45.0% | |
CCACCCATCAACAATCCATA+CGG | + | chr1.4:64513562-64513581 | None:intergenic | 45.0% | |
GAATTGGGTTCTCTCTGCAA+TGG | + | chr1.4:64512789-64512808 | None:intergenic | 45.0% | |
GACGTGTGTAACGGTTTACT+TGG | - | chr1.4:64513301-64513320 | MS.gene07605:CDS | 45.0% | |
GAGAAAGAAGCTGTAGTCAC+CGG | + | chr1.4:64512720-64512739 | None:intergenic | 45.0% | |
GTCCTTTCAATGCAACAGAC+CGG | + | chr1.4:64513048-64513067 | None:intergenic | 45.0% | |
GTGTGTAACGGTTTACTTGG+CGG | - | chr1.4:64513304-64513323 | MS.gene07605:CDS | 45.0% | |
GTTGTTCTGTTGTGGAACCA+TGG | - | chr1.4:64513347-64513366 | MS.gene07605:CDS | 45.0% | |
TACGGGATTGTTTGCAAAGG+GGG | - | chr1.4:64513504-64513523 | MS.gene07605:CDS | 45.0% | |
TGCTTATGCGTATCATGACG+AGG | - | chr1.4:64513747-64513766 | MS.gene07605:CDS | 45.0% | |
TGGACTTGACTAGACATGGT+GGG | - | chr1.4:64513722-64513741 | MS.gene07605:CDS | 45.0% | |
TTACCCCATCGTTTCGCATT+GGG | - | chr1.4:64512850-64512869 | MS.gene07605:CDS | 45.0% | |
TTTACCCCATCGTTTCGCAT+TGG | - | chr1.4:64512849-64512868 | MS.gene07605:CDS | 45.0% | |
! | AGGCCGTATGGATTGTTGAT+GGG | - | chr1.4:64513556-64513575 | MS.gene07605:CDS | 45.0% |
! | GGTGTTGTCTATTGCATAGG+TGG | + | chr1.4:64512465-64512484 | None:intergenic | 45.0% |
! | GGTTTTGCTGCTATAACTGC+AGG | - | chr1.4:64513325-64513344 | MS.gene07605:CDS | 45.0% |
! | TATGGATTGTTGATGGGTGG+TGG | - | chr1.4:64513562-64513581 | MS.gene07605:CDS | 45.0% |
! | TGGTGTTGAATTGGGTGCAT+AGG | + | chr1.4:64512421-64512440 | None:intergenic | 45.0% |
!! | AGGTGTTGGTTATTTGTGGG+TGG | - | chr1.4:64513614-64513633 | MS.gene07605:CDS | 45.0% |
!! | GATTGTGTGTGGGTTTGTTG+CGG | - | chr1.4:64513375-64513394 | MS.gene07605:CDS | 45.0% |
!! | GGTGTTGGTTATTTGTGGGT+GGG | - | chr1.4:64513615-64513634 | MS.gene07605:CDS | 45.0% |
!! | GTTATTGACTTTGCCGGTTC+AGG | - | chr1.4:64512938-64512957 | MS.gene07605:CDS | 45.0% |
!! | TCCGGTGTTATTGACTTTGC+CGG | - | chr1.4:64512932-64512951 | MS.gene07605:CDS | 45.0% |
!!! | GTTTTTGGCTCTAACAGAGC+CGG | + | chr1.4:64512549-64512568 | None:intergenic | 45.0% |
AAGAAGCTGTAGTCACCGGA+AGG | + | chr1.4:64512716-64512735 | None:intergenic | 50.0% | |
AATGGAGCCACTGGTGATAC+CGG | + | chr1.4:64512771-64512790 | None:intergenic | 50.0% | |
AGCCGAAGAGATAGTAGGAG+AGG | + | chr1.4:64512619-64512638 | None:intergenic | 50.0% | |
AGCGAAGCCGAAGAGATAGT+AGG | + | chr1.4:64512624-64512643 | None:intergenic | 50.0% | |
AGGGATTACCCTTCACCTTC+CGG | - | chr1.4:64512698-64512717 | MS.gene07605:CDS | 50.0% | |
AGTGTCACAACGACATTGGC+TGG | - | chr1.4:64513220-64513239 | MS.gene07605:CDS | 50.0% | |
ATGAGATTTATGGGTCCGGG+AGG | - | chr1.4:64513536-64513555 | MS.gene07605:CDS | 50.0% | |
CATGTGAACCACACCTGAAC+CGG | + | chr1.4:64512954-64512973 | None:intergenic | 50.0% | |
CCAAACCCAATGCGAAACGA+TGG | + | chr1.4:64512858-64512877 | None:intergenic | 50.0% | |
CCATCGTTTCGCATTGGGTT+TGG | - | chr1.4:64512855-64512874 | MS.gene07605:CDS | 50.0% | |
CCCTTAGACCGAAAAAGTGG+CGG | + | chr1.4:64512682-64512701 | None:intergenic | 50.0% | |
CTAGAATAGGGCGATTCGAC+CGG | - | chr1.4:64513017-64513036 | MS.gene07605:CDS | 50.0% | |
GCACCCTCCAATGGTTTCAT+CGG | - | chr1.4:64512656-64512675 | MS.gene07605:CDS | 50.0% | |
GGCCTCTCCTACTATCTCTT+CGG | - | chr1.4:64512614-64512633 | MS.gene07605:CDS | 50.0% | |
GGGTGGTATAGCAGGGTTAT+GGG | - | chr1.4:64512976-64512995 | MS.gene07605:CDS | 50.0% | |
GGTGCATAGGTAGTCTGCAA+CGG | + | chr1.4:64512408-64512427 | None:intergenic | 50.0% | |
GGTGGTATAGCAGGGTTATG+GGG | - | chr1.4:64512977-64512996 | MS.gene07605:CDS | 50.0% | |
GTGGTATAGCAGGGTTATGG+GGG | - | chr1.4:64512978-64512997 | MS.gene07605:CDS | 50.0% | |
TCAGGTGTGGTTCACATGGT+GGG | - | chr1.4:64512956-64512975 | MS.gene07605:CDS | 50.0% | |
TGCAGAGAGAACCCAATTCG+TGG | - | chr1.4:64512790-64512809 | MS.gene07605:CDS | 50.0% | |
TGGGTGGTATAGCAGGGTTA+TGG | - | chr1.4:64512975-64512994 | MS.gene07605:CDS | 50.0% | |
TGGTATAGCAGGGTTATGGG+GGG | - | chr1.4:64512979-64512998 | MS.gene07605:CDS | 50.0% | |
TGTAACTGCGCAGCCTCTAA+TGG | + | chr1.4:64513454-64513473 | None:intergenic | 50.0% | |
TGTAGTCACCGGAAGGTGAA+GGG | + | chr1.4:64512709-64512728 | None:intergenic | 50.0% | |
TTAGAGGCTGCGCAGTTACA+CGG | - | chr1.4:64513454-64513473 | MS.gene07605:CDS | 50.0% | |
TTCAGGTGTGGTTCACATGG+TGG | - | chr1.4:64512955-64512974 | MS.gene07605:CDS | 50.0% | |
! | CACACTGAAGGTGCACTGAT+TGG | + | chr1.4:64513871-64513890 | None:intergenic | 50.0% |
! | CCGTATGGATTGTTGATGGG+TGG | - | chr1.4:64513559-64513578 | MS.gene07605:CDS | 50.0% |
! | GAGGCCGTATGGATTGTTGA+TGG | - | chr1.4:64513555-64513574 | MS.gene07605:CDS | 50.0% |
! | GGGATGGACTTGACTAGACA+TGG | - | chr1.4:64513718-64513737 | MS.gene07605:CDS | 50.0% |
! | TTAGTCTTCGCCATGCAGCT+TGG | - | chr1.4:64512506-64512525 | MS.gene07605:CDS | 50.0% |
!! | ACATGGTGGGTGGTATAGCA+GGG | - | chr1.4:64512969-64512988 | MS.gene07605:CDS | 50.0% |
!! | GATTGTTGATGGGTGGTGGA+GGG | - | chr1.4:64513566-64513585 | MS.gene07605:CDS | 50.0% |
!! | TGCATGGGGGGTGTTGTTTA+CGG | - | chr1.4:64513486-64513505 | MS.gene07605:CDS | 50.0% |
!!! | CCGCCACTTTTTCGGTCTAA+GGG | - | chr1.4:64512679-64512698 | MS.gene07605:CDS | 50.0% |
!!! | TTCATCGGCCGCCACTTTTT+CGG | - | chr1.4:64512671-64512690 | MS.gene07605:CDS | 50.0% |
!!! | TTGCGGCGTGGGTTTTGATT+GGG | - | chr1.4:64513392-64513411 | MS.gene07605:CDS | 50.0% |
CAACAATCCATACGGCCTCC+CGG | + | chr1.4:64513554-64513573 | None:intergenic | 55.0% | |
CATGGCGAAACCAAGCTGCA+TGG | + | chr1.4:64512519-64512538 | None:intergenic | 55.0% | |
CGAGGGATGATGAGACTGCA+GGG | - | chr1.4:64513698-64513717 | MS.gene07605:CDS | 55.0% | |
CGGCCGATGAAACCATTGGA+GGG | + | chr1.4:64512662-64512681 | None:intergenic | 55.0% | |
CGGTCGAATCGCCCTATTCT+AGG | + | chr1.4:64513019-64513038 | None:intergenic | 55.0% | |
CGGTTCAGGTGTGGTTCACA+TGG | - | chr1.4:64512952-64512971 | MS.gene07605:CDS | 55.0% | |
CTGTAGTCACCGGAAGGTGA+AGG | + | chr1.4:64512710-64512729 | None:intergenic | 55.0% | |
GAAAGGACATAGCGCGTCGT+TGG | - | chr1.4:64513060-64513079 | MS.gene07605:CDS | 55.0% | |
GAGATAGTAGGAGAGGCCAC+CGG | + | chr1.4:64512612-64512631 | None:intergenic | 55.0% | |
GCATAGGTAGTCTGCAACGG+CGG | + | chr1.4:64512405-64512424 | None:intergenic | 55.0% | |
GGATGATGAGACTGCAGGGA+TGG | - | chr1.4:64513702-64513721 | MS.gene07605:CDS | 55.0% | |
GGCCGGTCTGTTGCATTGAA+AGG | - | chr1.4:64513043-64513062 | MS.gene07605:CDS | 55.0% | |
TCGAGGGATGATGAGACTGC+AGG | - | chr1.4:64513697-64513716 | MS.gene07605:CDS | 55.0% | |
TCTCTCTGCAATGGAGCCAC+TGG | + | chr1.4:64512780-64512799 | None:intergenic | 55.0% | |
TGGTGGAGGGAGGTTGTTTG+CGG | - | chr1.4:64513579-64513598 | MS.gene07605:CDS | 55.0% | |
TTCGGCTTCGCTTTCGCCTT+TGG | - | chr1.4:64512632-64512651 | MS.gene07605:CDS | 55.0% | |
! | CATTGGGTTTGGTCTGCCGA+TGG | - | chr1.4:64512866-64512885 | MS.gene07605:CDS | 55.0% |
! | GGATTGTTGATGGGTGGTGG+AGG | - | chr1.4:64513565-64513584 | MS.gene07605:CDS | 55.0% |
! | GGTTTGGTCTGCCGATGGTT+GGG | - | chr1.4:64512871-64512890 | MS.gene07605:CDS | 55.0% |
! | TAGCGTTTGCAGTGGTGGTG+AGG | + | chr1.4:64512382-64512401 | None:intergenic | 55.0% |
! | TTGCAGTGGTGGTGAGGAGT+GGG | + | chr1.4:64512376-64512395 | None:intergenic | 55.0% |
! | TTTGCAGTGGTGGTGAGGAG+TGG | + | chr1.4:64512377-64512396 | None:intergenic | 55.0% |
!! | ACATCACCATCGGTTCGCGT+TGG | + | chr1.4:64512902-64512921 | None:intergenic | 55.0% |
!! | ACCATTGGAGGGTGCTCCAA+AGG | + | chr1.4:64512651-64512670 | None:intergenic | 55.0% |
!! | CACATGGTGGGTGGTATAGC+AGG | - | chr1.4:64512968-64512987 | MS.gene07605:CDS | 55.0% |
!! | CATCACCATCGGTTCGCGTT+GGG | + | chr1.4:64512901-64512920 | None:intergenic | 55.0% |
!! | GAAGGTGCACTGATTGGCAC+CGG | + | chr1.4:64513865-64513884 | None:intergenic | 55.0% |
!! | GCATGGGGGGTGTTGTTTAC+GGG | - | chr1.4:64513487-64513506 | MS.gene07605:CDS | 55.0% |
!! | GTTGCGGCGTGGGTTTTGAT+TGG | - | chr1.4:64513391-64513410 | MS.gene07605:CDS | 55.0% |
!! | TGACTTTGCCGGTTCAGGTG+TGG | - | chr1.4:64512943-64512962 | MS.gene07605:CDS | 55.0% |
!! | TGGGTGGGTTACCGTCACAA+TGG | - | chr1.4:64513630-64513649 | MS.gene07605:CDS | 55.0% |
!!! | GCCGCCACTTTTTCGGTCTA+AGG | - | chr1.4:64512678-64512697 | MS.gene07605:CDS | 55.0% |
AACAGAGCCGGCACAGAGCA+TGG | + | chr1.4:64512537-64512556 | None:intergenic | 60.0% | |
AACGGCGGTAGCGTTTGCAG+TGG | + | chr1.4:64512390-64512409 | None:intergenic | 60.0% | |
AATGTCCTCGACGCTGCAGC+CGG | - | chr1.4:64512590-64512609 | MS.gene07605:CDS | 60.0% | |
AGGACATAGCGCGTCGTTGG+TGG | - | chr1.4:64513063-64513082 | MS.gene07605:CDS | 60.0% | |
AGGCTGCGCAGTTACACGGA+GGG | - | chr1.4:64513458-64513477 | MS.gene07605:CDS | 60.0% | |
AGTGTGTCTCCCTCTGCCAC+CGG | - | chr1.4:64513829-64513848 | MS.gene07605:CDS | 60.0% | |
ATAGGGCGATTCGACCGGAC+AGG | - | chr1.4:64513022-64513041 | MS.gene07605:CDS | 60.0% | |
ATGCAACAGACCGGCCTGTC+CGG | + | chr1.4:64513039-64513058 | None:intergenic | 60.0% | |
CATGGGCCGCGATTGTGTGT+GGG | - | chr1.4:64513365-64513384 | MS.gene07605:CDS | 60.0% | |
GCGGCCGATGAAACCATTGG+AGG | + | chr1.4:64512663-64512682 | None:intergenic | 60.0% | |
GGTTTCGCCATGCTCTGTGC+CGG | - | chr1.4:64512527-64512546 | MS.gene07605:CDS | 60.0% | |
GTATCGTGTCCGGTGGCAGA+GGG | + | chr1.4:64513841-64513860 | None:intergenic | 60.0% | |
GTGGCGGCCGATGAAACCAT+TGG | + | chr1.4:64512666-64512685 | None:intergenic | 60.0% | |
TGCCACCGGACACGATACAC+CGG | - | chr1.4:64513843-64513862 | MS.gene07605:CDS | 60.0% | |
TGTATCGTGTCCGGTGGCAG+AGG | + | chr1.4:64513842-64513861 | None:intergenic | 60.0% | |
! | GGGTTTGGTCTGCCGATGGT+TGG | - | chr1.4:64512870-64512889 | MS.gene07605:CDS | 60.0% |
! | GGTGTGGTTCACATGGTGGG+TGG | - | chr1.4:64512959-64512978 | MS.gene07605:CDS | 60.0% |
! | GGTTGGTACGGGTTCAACCC+CGG | - | chr1.4:64513112-64513131 | MS.gene07605:CDS | 60.0% |
! | TGCAGTGGTGGTGAGGAGTG+GGG | + | chr1.4:64512375-64512394 | None:intergenic | 60.0% |
!! | AGCGCGTCGTTGGTGGTGTT+GGG | - | chr1.4:64513070-64513089 | MS.gene07605:CDS | 60.0% |
!! | GCCTTTGGAGCACCCTCCAA+TGG | - | chr1.4:64512647-64512666 | MS.gene07605:CDS | 60.0% |
!! | GTGTGGGTTTGTTGCGGCGT+GGG | - | chr1.4:64513381-64513400 | MS.gene07605:CDS | 60.0% |
!! | TAGCGCGTCGTTGGTGGTGT+TGG | - | chr1.4:64513069-64513088 | MS.gene07605:CDS | 60.0% |
!! | TGGCACCGGTGTATCGTGTC+CGG | + | chr1.4:64513851-64513870 | None:intergenic | 60.0% |
!! | TGTGTGGGTTTGTTGCGGCG+TGG | - | chr1.4:64513380-64513399 | MS.gene07605:CDS | 60.0% |
!! | TGTTGATGGGTGGTGGAGGG+AGG | - | chr1.4:64513569-64513588 | MS.gene07605:CDS | 60.0% |
AGGGAGGTTGTTTGCGGCGC+AGG | - | chr1.4:64513585-64513604 | MS.gene07605:CDS | 65.0% | |
CACCGGTGTATCGTGTCCGG+TGG | + | chr1.4:64513848-64513867 | None:intergenic | 65.0% | |
CAGCGATGGCGAAGGCCCAT+TGG | + | chr1.4:64512745-64512764 | None:intergenic | 65.0% | |
CCACACACAATCGCGGCCCA+TGG | + | chr1.4:64513367-64513386 | None:intergenic | 65.0% | |
CCATGGGCCGCGATTGTGTG+TGG | - | chr1.4:64513364-64513383 | MS.gene07605:CDS | 65.0% | |
GAGGCTGCGCAGTTACACGG+AGG | - | chr1.4:64513457-64513476 | MS.gene07605:CDS | 65.0% | |
GAGGGAGACACACTCGTGGC+CGG | + | chr1.4:64513823-64513842 | None:intergenic | 65.0% | |
GAGGTTGTTTGCGGCGCAGG+TGG | - | chr1.4:64513588-64513607 | MS.gene07605:CDS | 65.0% | |
GCGCAGTTACACGGAGGGTG+CGG | - | chr1.4:64513463-64513482 | MS.gene07605:CDS | 65.0% | |
GCTGCTGCCGGTATCACCAG+TGG | - | chr1.4:64512761-64512780 | MS.gene07605:CDS | 65.0% | |
GGCAGAGGGAGACACACTCG+TGG | + | chr1.4:64513827-64513846 | None:intergenic | 65.0% | |
GGCGCAGGTGGTTGAGGTGT+TGG | - | chr1.4:64513600-64513619 | MS.gene07605:CDS | 65.0% | |
GGCGGTAGCGTTTGCAGTGG+TGG | + | chr1.4:64512387-64512406 | None:intergenic | 65.0% | |
GGTGATACCGGCAGCAGCGA+TGG | + | chr1.4:64512759-64512778 | None:intergenic | 65.0% | |
GTTTGCGGCGCAGGTGGTTG+AGG | - | chr1.4:64513594-64513613 | MS.gene07605:CDS | 65.0% | |
TATGGGTCCGGGAGGCCGTA+TGG | - | chr1.4:64513544-64513563 | MS.gene07605:CDS | 65.0% | |
! | ACACGGAGGGTGCGGTGCAT+GGG | - | chr1.4:64513471-64513490 | MS.gene07605:CDS | 65.0% |
! | GGCTGCAGCGTCGAGGACAT+TGG | + | chr1.4:64512591-64512610 | None:intergenic | 65.0% |
! | TACACGGAGGGTGCGGTGCA+TGG | - | chr1.4:64513470-64513489 | MS.gene07605:CDS | 65.0% |
!! | ACCATCGGTTCGCGTTGGGC+TGG | + | chr1.4:64512897-64512916 | None:intergenic | 65.0% |
!! | CGTTGGGCTGGCCCAACCAT+CGG | + | chr1.4:64512885-64512904 | None:intergenic | 65.0% |
ACCGGCAGCAGCGATGGCGA+AGG | + | chr1.4:64512753-64512772 | None:intergenic | 70.0% | |
GAGGAGTGGGGCGAGGTCTG+TGG | + | chr1.4:64512363-64512382 | None:intergenic | 70.0% | |
GCCAGCCCAACGCGAACCGA+TGG | - | chr1.4:64512893-64512912 | MS.gene07605:CDS | 70.0% | |
GCCTTCGCCATCGCTGCTGC+CGG | - | chr1.4:64512749-64512768 | MS.gene07605:CDS | 70.0% | |
GGCGATTCGACCGGACAGGC+CGG | - | chr1.4:64513026-64513045 | MS.gene07605:CDS | 70.0% | |
! | ACGGAGGGTGCGGTGCATGG+GGG | - | chr1.4:64513473-64513492 | MS.gene07605:CDS | 70.0% |
! | CACGGAGGGTGCGGTGCATG+GGG | - | chr1.4:64513472-64513491 | MS.gene07605:CDS | 70.0% |
! | TGGTGGTGAGGAGTGGGGCG+AGG | + | chr1.4:64512370-64512389 | None:intergenic | 70.0% |
GTCCTCGACGCTGCAGCCGG+TGG | - | chr1.4:64512593-64512612 | MS.gene07605:CDS | 75.0% | |
! | CGGAGGGTGCGGTGCATGGG+GGG | - | chr1.4:64513474-64513493 | MS.gene07605:CDS | 75.0% |
!! | GGCCACCGGCTGCAGCGTCG+AGG | + | chr1.4:64512598-64512617 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 64512338 | 64513891 | 64512338 | ID=MS.gene07605 |
chr1.4 | mRNA | 64512338 | 64513891 | 64512338 | ID=MS.gene07605.t1;Parent=MS.gene07605 |
chr1.4 | exon | 64512338 | 64513891 | 64512338 | ID=MS.gene07605.t1.exon1;Parent=MS.gene07605.t1 |
chr1.4 | CDS | 64512338 | 64513891 | 64512338 | ID=cds.MS.gene07605.t1;Parent=MS.gene07605.t1 |
Gene Sequence |
Protein sequence |