AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07605


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07605.t1 MTR_1g079760 97.303 519 12 1 1 517 1 519 0.0 1019
MS.gene07605.t1 MTR_1g045550 72.888 509 124 6 1 504 1 500 0.0 736
MS.gene07605.t1 MTR_7g098930 72.505 491 127 4 1 487 1 487 0.0 715
MS.gene07605.t1 MTR_7g113340 71.837 490 128 5 1 485 1 485 0.0 704
MS.gene07605.t1 MTR_3g463730 66.964 448 135 5 41 482 8 448 0.0 590
MS.gene07605.t1 MTR_7g115050 28.827 392 209 16 112 477 100 447 2.90e-24 106
MS.gene07605.t1 MTR_8g074750 26.022 465 276 17 47 484 30 453 4.20e-20 93.6
MS.gene07605.t1 MTR_1g036410 24.841 471 275 17 47 482 24 450 7.21e-19 89.7
MS.gene07605.t1 MTR_7g069640 26.667 495 290 16 47 505 22 479 1.61e-16 82.4
MS.gene07605.t1 MTR_8g095040 25.581 473 285 14 47 485 29 468 2.92e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07605.t1 AT1G64780 76.062 518 105 7 2 511 4 510 0.0 776
MS.gene07605.t1 AT4G13510 73.930 514 116 8 4 512 1 501 0.0 756
MS.gene07605.t1 AT3G24300 73.123 506 117 5 3 504 4 494 0.0 739
MS.gene07605.t1 AT3G24290 74.948 483 110 5 3 481 4 479 0.0 721
MS.gene07605.t1 AT4G28700 73.333 495 121 6 2 487 3 495 0.0 698
MS.gene07605.t1 AT2G38290 26.190 462 288 14 47 486 20 450 1.22e-20 95.1
MS.gene07605.t1 AT2G38290 27.019 359 224 11 135 486 7 334 3.36e-18 86.7

Find 197 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTATGTTGATGAGATTTA+TGG 0.166530 1.4:-64512681 MS.gene07605:CDS
GACGAGTCTATTAGGAAATT+AGG 0.214176 1.4:-64512432 MS.gene07605:CDS
TTTGATTGGGCTTAATAAAT+TGG 0.218891 1.4:-64512802 MS.gene07605:CDS
TAGGAAATTAGGGTTTATTA+TGG 0.238047 1.4:-64512421 MS.gene07605:CDS
TTCGGCTTCGCTTTCGCCTT+TGG 0.287554 1.4:-64513575 MS.gene07605:CDS
CGGTCGAATCGCCCTATTCT+AGG 0.293247 1.4:+64513191 None:intergenic
GTTATTGACTTTGCCGGTTC+AGG 0.294088 1.4:-64513269 MS.gene07605:CDS
GGGTGGTATAGCAGGGTTAT+GGG 0.312935 1.4:-64513231 MS.gene07605:CDS
TCCGGTGTTATTGACTTTGC+CGG 0.323221 1.4:-64513275 MS.gene07605:CDS
TATGGTCAATGGAGTGCTAT+TGG 0.333213 1.4:-64513017 MS.gene07605:CDS
GTTGAGGTGTTGGTTATTTG+TGG 0.337506 1.4:-64512597 MS.gene07605:CDS
AGGGAGGTTGTTTGCGGCGC+AGG 0.338172 1.4:-64512622 MS.gene07605:CDS
CACATGGTGGGTGGTATAGC+AGG 0.340009 1.4:-64513239 MS.gene07605:CDS
CACGGAGGGTGCGGTGCATG+GGG 0.340968 1.4:-64512735 MS.gene07605:CDS
AGGAAGATGACGAGTCTATT+AGG 0.343254 1.4:-64512440 MS.gene07605:CDS
ATATATTCTTCTTTCTTAAC+CGG 0.346432 1.4:-64513386 MS.gene07605:CDS
ACGAGTCTATTAGGAAATTA+GGG 0.347347 1.4:-64512431 MS.gene07605:CDS
TGTAACTGCGCAGCCTCTAA+TGG 0.347657 1.4:+64512756 None:intergenic
TACACGGAGGGTGCGGTGCA+TGG 0.352401 1.4:-64512737 MS.gene07605:CDS
CCATCGTTTCGCATTGGGTT+TGG 0.355981 1.4:-64513352 MS.gene07605:CDS
ACACGGAGGGTGCGGTGCAT+GGG 0.356133 1.4:-64512736 MS.gene07605:CDS
AGGGATTACCCTTCACCTTC+CGG 0.361786 1.4:-64513509 MS.gene07605:CDS
TAGCGCGTCGTTGGTGGTGT+TGG 0.373610 1.4:-64513138 MS.gene07605:CDS
GGATTGTTGATGGGTGGTGG+AGG 0.374838 1.4:-64512642 MS.gene07605:CDS
ATTTGAGATGGTGTTGAATT+GGG 0.384973 1.4:+64513781 None:intergenic
AGTATGTTGATGAGATTTAT+GGG 0.385179 1.4:-64512680 MS.gene07605:CDS
TTACCCCATCGTTTCGCATT+GGG 0.385239 1.4:-64513357 MS.gene07605:CDS
TAACAACTTTGTTTAGTAAA+CGG 0.393569 1.4:-64512950 MS.gene07605:CDS
TTTATAGAAGGTCCTAGAAT+AGG 0.393823 1.4:-64513203 MS.gene07605:CDS
TTTAGTAAACGGTTATTAGT+TGG 0.394285 1.4:-64512939 MS.gene07605:CDS
ATATGAGATATGCCACGAAT+TGG 0.394904 1.4:+64513405 None:intergenic
TATTTGAGATGGTGTTGAAT+TGG 0.400022 1.4:+64513780 None:intergenic
GACGTGTGTAACGGTTTACT+TGG 0.402700 1.4:-64512906 MS.gene07605:CDS
GGTTTGGTCTGCCGATGGTT+GGG 0.403385 1.4:-64513336 MS.gene07605:CDS
TTGAGGTGTTGGTTATTTGT+GGG 0.404299 1.4:-64512596 MS.gene07605:CDS
TGGGTGGTATAGCAGGGTTA+TGG 0.404483 1.4:-64513232 MS.gene07605:CDS
AGTAACAAAAGGAATTATTA+TGG 0.405005 1.4:-64513035 MS.gene07605:CDS
CGGAGGGTGCGGTGCATGGG+GGG 0.405574 1.4:-64512733 MS.gene07605:CDS
TTGCAGTGGTGGTGAGGAGT+GGG 0.407639 1.4:+64513834 None:intergenic
CATGTGAACCACACCTGAAC+CGG 0.411513 1.4:+64513256 None:intergenic
TATTATGGTTTGGTTGGTAC+GGG 0.415535 1.4:-64513106 MS.gene07605:CDS
AGGAAATTAGGGTTTATTAT+GGG 0.422494 1.4:-64512420 MS.gene07605:CDS
TTATTATGGTTTGGTTGGTA+CGG 0.423451 1.4:-64513107 MS.gene07605:CDS
AGGTGTTGGTTATTTGTGGG+TGG 0.427283 1.4:-64512593 MS.gene07605:CDS
CATCACCATCGGTTCGCGTT+GGG 0.427874 1.4:+64513309 None:intergenic
GTGGTATAGCAGGGTTATGG+GGG 0.427928 1.4:-64513229 MS.gene07605:CDS
ATGCAACAGACCGGCCTGTC+CGG 0.429149 1.4:+64513171 None:intergenic
AGCGCGTCGTTGGTGGTGTT+GGG 0.430363 1.4:-64513137 MS.gene07605:CDS
ACCATCGGTTCGCGTTGGGC+TGG 0.431435 1.4:+64513313 None:intergenic
ATAAGCTGAGAAGAGAAGAT+AGG 0.432230 1.4:+64513724 None:intergenic
GTCAGTGAGTTTATTTGAGA+TGG 0.433333 1.4:+64513769 None:intergenic
GGTGTTGGTTATTTGTGGGT+GGG 0.433759 1.4:-64512592 MS.gene07605:CDS
ACGGAGGGTGCGGTGCATGG+GGG 0.434614 1.4:-64512734 MS.gene07605:CDS
AAAGGAATTATTATGGTCAA+TGG 0.435762 1.4:-64513028 MS.gene07605:CDS
TGTTGATGGGTGGTGGAGGG+AGG 0.437827 1.4:-64512638 MS.gene07605:CDS
CAGCGATGGCGAAGGCCCAT+TGG 0.442094 1.4:+64513465 None:intergenic
GAGGCCGTATGGATTGTTGA+TGG 0.443279 1.4:-64512652 MS.gene07605:CDS
GGCCTCTCCTACTATCTCTT+CGG 0.447262 1.4:-64513593 MS.gene07605:CDS
GGCGCAGGTGGTTGAGGTGT+TGG 0.450580 1.4:-64512607 MS.gene07605:CDS
CACACTGAAGGTGCACTGAT+TGG 0.453333 1.4:+64512339 None:intergenic
TTTACCCCATCGTTTCGCAT+TGG 0.453403 1.4:-64513358 MS.gene07605:CDS
GGTGGTATAGCAGGGTTATG+GGG 0.457348 1.4:-64513230 MS.gene07605:CDS
TATGAGATATGCCACGAATT+GGG 0.458451 1.4:+64513406 None:intergenic
TTATAGAAGGTCCTAGAATA+GGG 0.458590 1.4:-64513202 MS.gene07605:CDS
GCCTTCGCCATCGCTGCTGC+CGG 0.459814 1.4:-64513458 MS.gene07605:CDS
TGGTGGTGAGGAGTGGGGCG+AGG 0.461907 1.4:+64513840 None:intergenic
GATTGTTGATGGGTGGTGGA+GGG 0.464090 1.4:-64512641 MS.gene07605:CDS
GGGTTTGGTCTGCCGATGGT+TGG 0.467295 1.4:-64513337 MS.gene07605:CDS
GTTTGCGGCGCAGGTGGTTG+AGG 0.472995 1.4:-64512613 MS.gene07605:CDS
CTAGAATAGGGCGATTCGAC+CGG 0.474874 1.4:-64513190 MS.gene07605:CDS
TGGTGGAGGGAGGTTGTTTG+CGG 0.475634 1.4:-64512628 MS.gene07605:CDS
GTGTGGGTTTGTTGCGGCGT+GGG 0.479169 1.4:-64512826 MS.gene07605:CDS
GTTGTTCTGTTGTGGAACCA+TGG 0.481083 1.4:-64512860 MS.gene07605:CDS
GGCGGTAGCGTTTGCAGTGG+TGG 0.482310 1.4:+64513823 None:intergenic
GTTGATGAGATTTATGGGTC+CGG 0.482350 1.4:-64512675 MS.gene07605:CDS
GAGGAGTGGGGCGAGGTCTG+TGG 0.484837 1.4:+64513847 None:intergenic
GGTTTCGCCATGCTCTGTGC+CGG 0.485990 1.4:-64513680 MS.gene07605:CDS
AACGATGGGGTAAACAAAAC+CGG 0.487884 1.4:+64513367 None:intergenic
CGTTGGGCTGGCCCAACCAT+CGG 0.489504 1.4:+64513325 None:intergenic
TATGGGTCCGGGAGGCCGTA+TGG 0.489869 1.4:-64512663 MS.gene07605:CDS
TTTACGGGATTGTTTGCAAA+GGG 0.491383 1.4:-64512705 MS.gene07605:CDS
TCTCTCTGCAATGGAGCCAC+TGG 0.496625 1.4:+64513430 None:intergenic
TCAGGTGTGGTTCACATGGT+GGG 0.496702 1.4:-64513251 MS.gene07605:CDS
ACAGCTTCTTTCTCTACCAA+TGG 0.497981 1.4:-64513481 MS.gene07605:CDS
TGTATCGTGTCCGGTGGCAG+AGG 0.501134 1.4:+64512368 None:intergenic
CCATGGGCCGCGATTGTGTG+TGG 0.504024 1.4:-64512843 MS.gene07605:CDS
GAAGTATGATGATCCATTAG+AGG 0.505151 1.4:-64512769 MS.gene07605:CDS
TTGATGAGATTTATGGGTCC+GGG 0.505912 1.4:-64512674 MS.gene07605:CDS
ATTGGTGAGCATGATGTTCA+TGG 0.505916 1.4:+64513637 None:intergenic
CATTGGGTTTGGTCTGCCGA+TGG 0.506434 1.4:-64513341 MS.gene07605:CDS
AGTGTCACAACGACATTGGC+TGG 0.508487 1.4:-64512987 MS.gene07605:CDS
TATGGATTGTTGATGGGTGG+TGG 0.508513 1.4:-64512645 MS.gene07605:CDS
GAGGTTGTTTGCGGCGCAGG+TGG 0.508529 1.4:-64512619 MS.gene07605:CDS
GAAAGGACATAGCGCGTCGT+TGG 0.508596 1.4:-64513147 MS.gene07605:CDS
TCGAGGGATGATGAGACTGC+AGG 0.509046 1.4:-64512510 MS.gene07605:CDS
TGCAGAGAGAACCCAATTCG+TGG 0.511335 1.4:-64513417 MS.gene07605:CDS
TACGGGATTGTTTGCAAAGG+GGG 0.512801 1.4:-64512703 MS.gene07605:CDS
GTGTGTAACGGTTTACTTGG+CGG 0.514764 1.4:-64512903 MS.gene07605:CDS
CAGCTTCTTTCTCTACCAAT+GGG 0.516999 1.4:-64513480 MS.gene07605:CDS
AACTGCAGGTTGTTCTGTTG+TGG 0.517299 1.4:-64512868 MS.gene07605:CDS
ATGGAAATATGAGTAACAAA+AGG 0.518100 1.4:-64513046 MS.gene07605:CDS
GGCCGGTCTGTTGCATTGAA+AGG 0.519192 1.4:-64513164 MS.gene07605:CDS
GAGAAAGAAGCTGTAGTCAC+CGG 0.520220 1.4:+64513490 None:intergenic
AATGGAGCCACTGGTGATAC+CGG 0.521341 1.4:+64513439 None:intergenic
GCCTTTGGAGCACCCTCCAA+TGG 0.524193 1.4:-64513560 MS.gene07605:CDS
TTTGCAGTGGTGGTGAGGAG+TGG 0.524547 1.4:+64513833 None:intergenic
GCACCCTCCAATGGTTTCAT+CGG 0.528576 1.4:-64513551 MS.gene07605:CDS
AATGTCCTCGACGCTGCAGC+CGG 0.530902 1.4:-64513617 MS.gene07605:CDS
TGGTATAGCAGGGTTATGGG+GGG 0.532932 1.4:-64513228 MS.gene07605:CDS
GCGCAGTTACACGGAGGGTG+CGG 0.534032 1.4:-64512744 MS.gene07605:CDS
CGGTTCAGGTGTGGTTCACA+TGG 0.537956 1.4:-64513255 MS.gene07605:CDS
ACCATTGGAGGGTGCTCCAA+AGG 0.539068 1.4:+64513559 None:intergenic
AACAGAGCCGGCACAGAGCA+TGG 0.539811 1.4:+64513673 None:intergenic
AGGCCGTATGGATTGTTGAT+GGG 0.540097 1.4:-64512651 MS.gene07605:CDS
CTGTAGTCACCGGAAGGTGA+AGG 0.546826 1.4:+64513500 None:intergenic
CAACAATCCATACGGCCTCC+CGG 0.547364 1.4:+64512656 None:intergenic
ACATCACCATCGGTTCGCGT+TGG 0.547798 1.4:+64513308 None:intergenic
GGTTGGTACGGGTTCAACCC+CGG 0.549923 1.4:-64513095 MS.gene07605:CDS
ATAGGGCGATTCGACCGGAC+AGG 0.550537 1.4:-64513185 MS.gene07605:CDS
TTAGTCTTCGCCATGCAGCT+TGG 0.551508 1.4:-64513701 MS.gene07605:CDS
GAGGGAGACACACTCGTGGC+CGG 0.551918 1.4:+64512387 None:intergenic
GGCGATTCGACCGGACAGGC+CGG 0.554425 1.4:-64513181 MS.gene07605:CDS
GTCCTCGACGCTGCAGCCGG+TGG 0.554837 1.4:-64513614 MS.gene07605:CDS
AGGACATAGCGCGTCGTTGG+TGG 0.555347 1.4:-64513144 MS.gene07605:CDS
AGTGTGTCTCCCTCTGCCAC+CGG 0.555628 1.4:-64512378 MS.gene07605:CDS
TGGCACCGGTGTATCGTGTC+CGG 0.556207 1.4:+64512359 None:intergenic
TTCAGGTGTGGTTCACATGG+TGG 0.556560 1.4:-64513252 MS.gene07605:CDS
GCCAGCCCAACGCGAACCGA+TGG 0.556829 1.4:-64513314 MS.gene07605:CDS
GGATGATGAGACTGCAGGGA+TGG 0.557751 1.4:-64512505 MS.gene07605:CDS
GGTGATACCGGCAGCAGCGA+TGG 0.559774 1.4:+64513451 None:intergenic
GTTTACGGGATTGTTTGCAA+AGG 0.562175 1.4:-64512706 MS.gene07605:CDS
AGCGAAGCCGAAGAGATAGT+AGG 0.563480 1.4:+64513586 None:intergenic
ACCGGCAGCAGCGATGGCGA+AGG 0.564745 1.4:+64513457 None:intergenic
TGAAATTGTTGAGGATATCG+AGG 0.567161 1.4:-64512527 MS.gene07605:CDS
TATTATGGGTAGGATTGAGC+CGG 0.567782 1.4:-64512406 MS.gene07605:CDS
TTATTCAGCCCATAAAATAA+CGG 0.567889 1.4:+64512552 None:intergenic
AACGGTTATTAGTTGGACAC+TGG 0.568051 1.4:-64512932 MS.gene07605:CDS
CAAACCCAATGCGAAACGAT+GGG 0.569510 1.4:+64513353 None:intergenic
GTCCTTTCAATGCAACAGAC+CGG 0.570037 1.4:+64513162 None:intergenic
TGGTGTTGAATTGGGTGCAT+AGG 0.570282 1.4:+64513789 None:intergenic
CATGGCGAAACCAAGCTGCA+TGG 0.574623 1.4:+64513691 None:intergenic
GAATTGGGTTCTCTCTGCAA+TGG 0.575318 1.4:+64513421 None:intergenic
GGCTGCAGCGTCGAGGACAT+TGG 0.575668 1.4:+64513619 None:intergenic
TTGTTCTGTTGTGGAACCAT+GGG 0.576456 1.4:-64512859 MS.gene07605:CDS
CCAAACCCAATGCGAAACGA+TGG 0.576636 1.4:+64513352 None:intergenic
GTATCGTGTCCGGTGGCAGA+GGG 0.577389 1.4:+64512369 None:intergenic
TGACTTTGCCGGTTCAGGTG+TGG 0.579151 1.4:-64513264 MS.gene07605:CDS
TAGCGTTTGCAGTGGTGGTG+AGG 0.579196 1.4:+64513828 None:intergenic
GTGGCGGCCGATGAAACCAT+TGG 0.579590 1.4:+64513544 None:intergenic
GGTGTTGTCTATTGCATAGG+TGG 0.580209 1.4:+64513745 None:intergenic
TTAGAGGCTGCGCAGTTACA+CGG 0.582164 1.4:-64512753 MS.gene07605:CDS
AATTAGGGTTTATTATGGGT+AGG 0.582942 1.4:-64512416 MS.gene07605:CDS
AACAAGTGTCACAACGACAT+TGG 0.584782 1.4:-64512991 MS.gene07605:CDS
TGTAGTCACCGGAAGGTGAA+GGG 0.585601 1.4:+64513501 None:intergenic
CATGGGCCGCGATTGTGTGT+GGG 0.586850 1.4:-64512842 MS.gene07605:CDS
CCCAAATAAAACATCACCAT+CGG 0.587790 1.4:+64513298 None:intergenic
ATAGGTGTTGTCTATTGCAT+AGG 0.589178 1.4:+64513742 None:intergenic
CGAGGGATGATGAGACTGCA+GGG 0.589259 1.4:-64512509 MS.gene07605:CDS
TGAATAAGATGAAATTGTTG+AGG 0.592343 1.4:-64512536 MS.gene07605:CDS
AACAAACCCACACACAATCG+CGG 0.593035 1.4:+64512836 None:intergenic
GCATAGGTAGTCTGCAACGG+CGG 0.597113 1.4:+64513805 None:intergenic
AGCCGAAGAGATAGTAGGAG+AGG 0.597353 1.4:+64513591 None:intergenic
CCACCCATCAACAATCCATA+CGG 0.604211 1.4:+64512648 None:intergenic
GAGATAGTAGGAGAGGCCAC+CGG 0.607346 1.4:+64513598 None:intergenic
TGCAGTGGTGGTGAGGAGTG+GGG 0.607421 1.4:+64513835 None:intergenic
CCACACACAATCGCGGCCCA+TGG 0.607906 1.4:+64512843 None:intergenic
CGGCCGATGAAACCATTGGA+GGG 0.608253 1.4:+64513548 None:intergenic
GCGGCCGATGAAACCATTGG+AGG 0.609997 1.4:+64513547 None:intergenic
CCGTATGGATTGTTGATGGG+TGG 0.612064 1.4:-64512648 MS.gene07605:CDS
GGTGTGGTTCACATGGTGGG+TGG 0.612109 1.4:-64513248 MS.gene07605:CDS
AAATAACGGCACCATTGTGA+CGG 0.614051 1.4:+64512566 None:intergenic
GCTGCTGCCGGTATCACCAG+TGG 0.615421 1.4:-64513446 MS.gene07605:CDS
TGTGTGGGTTTGTTGCGGCG+TGG 0.623345 1.4:-64512827 MS.gene07605:CDS
TGGACTTGACTAGACATGGT+GGG 0.625359 1.4:-64512485 MS.gene07605:CDS
GATTGTGTGTGGGTTTGTTG+CGG 0.627273 1.4:-64512832 MS.gene07605:CDS
TGCCACCGGACACGATACAC+CGG 0.628233 1.4:-64512364 MS.gene07605:CDS
CACCGGTGTATCGTGTCCGG+TGG 0.628689 1.4:+64512362 None:intergenic
GGTGCATAGGTAGTCTGCAA+CGG 0.633576 1.4:+64513802 None:intergenic
GAAATTGTTGAGGATATCGA+GGG 0.633706 1.4:-64512526 MS.gene07605:CDS
CACTGGAATGACGTGTGTAA+CGG 0.636365 1.4:-64512915 MS.gene07605:CDS
TGCTTATGCGTATCATGACG+AGG 0.643185 1.4:-64512460 MS.gene07605:CDS
GAAGGTGCACTGATTGGCAC+CGG 0.646404 1.4:+64512345 None:intergenic
GGCCACCGGCTGCAGCGTCG+AGG 0.648352 1.4:+64513612 None:intergenic
AGGCTGCGCAGTTACACGGA+GGG 0.649107 1.4:-64512749 MS.gene07605:CDS
AAGAAGCTGTAGTCACCGGA+AGG 0.653398 1.4:+64513494 None:intergenic
AACGGCGGTAGCGTTTGCAG+TGG 0.660892 1.4:+64513820 None:intergenic
ACATGGTGGGTGGTATAGCA+GGG 0.662991 1.4:-64513238 MS.gene07605:CDS
ACCGGCAAAGTCAATAACAC+CGG 0.670560 1.4:+64513274 None:intergenic
TGGGTGGGTTACCGTCACAA+TGG 0.675313 1.4:-64512577 MS.gene07605:CDS
AAACCCAATGCGAAACGATG+GGG 0.679819 1.4:+64513354 None:intergenic
TCGTGATGATATCACACTGA+AGG 0.680385 1.4:+64512327 None:intergenic
GGCAGAGGGAGACACACTCG+TGG 0.689003 1.4:+64512383 None:intergenic
ATGAGATTTATGGGTCCGGG+AGG 0.689021 1.4:-64512671 MS.gene07605:CDS
GGGATGGACTTGACTAGACA+TGG 0.695287 1.4:-64512489 MS.gene07605:CDS
ATGGACTTGACTAGACATGG+TGG 0.698702 1.4:-64512486 MS.gene07605:CDS
TTACGGGATTGTTTGCAAAG+GGG 0.721445 1.4:-64512704 MS.gene07605:CDS
GAGGCTGCGCAGTTACACGG+AGG 0.735378 1.4:-64512750 MS.gene07605:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAACAAAAGGAATTATTA+TGG - chr1.4:64513172-64513191 MS.gene07605:CDS 20.0%
!! ATATATTCTTCTTTCTTAAC+CGG - chr1.4:64512821-64512840 MS.gene07605:CDS 20.0%
!!! TAACAACTTTGTTTAGTAAA+CGG - chr1.4:64513257-64513276 MS.gene07605:CDS 20.0%
! AAAGGAATTATTATGGTCAA+TGG - chr1.4:64513179-64513198 MS.gene07605:CDS 25.0%
! AGGAAATTAGGGTTTATTAT+GGG - chr1.4:64513787-64513806 MS.gene07605:CDS 25.0%
! ATGGAAATATGAGTAACAAA+AGG - chr1.4:64513161-64513180 MS.gene07605:CDS 25.0%
! TAGGAAATTAGGGTTTATTA+TGG - chr1.4:64513786-64513805 MS.gene07605:CDS 25.0%
! TGAATAAGATGAAATTGTTG+AGG - chr1.4:64513671-64513690 MS.gene07605:CDS 25.0%
! TGCAATTGTTAAAAATGAAC+CGG + chr1.4:64513134-64513153 None:intergenic 25.0%
! TTAACAATTGCAAAAAGCTA+TGG - chr1.4:64513142-64513161 MS.gene07605:CDS 25.0%
! TTATTCAGCCCATAAAATAA+CGG + chr1.4:64513658-64513677 None:intergenic 25.0%
! TTTAGTAAACGGTTATTAGT+TGG - chr1.4:64513268-64513287 MS.gene07605:CDS 25.0%
! TTTGATTGGGCTTAATAAAT+TGG - chr1.4:64513405-64513424 MS.gene07605:CDS 25.0%
!! AGTATGTTGATGAGATTTAT+GGG - chr1.4:64513527-64513546 MS.gene07605:CDS 25.0%
!!! CTTTTTTATTATGGTTTGGT+TGG - chr1.4:64513095-64513114 MS.gene07605:CDS 25.0%
!!! GGTTCTTTTTTATTATGGTT+TGG - chr1.4:64513091-64513110 MS.gene07605:CDS 25.0%
!!! TGTTGGGTTCTTTTTTATTA+TGG - chr1.4:64513086-64513105 MS.gene07605:CDS 25.0%
AATTAGGGTTTATTATGGGT+AGG - chr1.4:64513791-64513810 MS.gene07605:CDS 30.0%
ACGAGTCTATTAGGAAATTA+GGG - chr1.4:64513776-64513795 MS.gene07605:CDS 30.0%
CAATTGTTAAAAATGAACCG+GGG + chr1.4:64513132-64513151 None:intergenic 30.0%
GCAATTGTTAAAAATGAACC+GGG + chr1.4:64513133-64513152 None:intergenic 30.0%
TTATAGAAGGTCCTAGAATA+GGG - chr1.4:64513005-64513024 MS.gene07605:CDS 30.0%
TTTATAGAAGGTCCTAGAAT+AGG - chr1.4:64513004-64513023 MS.gene07605:CDS 30.0%
! ATTTGAGATGGTGTTGAATT+GGG + chr1.4:64512429-64512448 None:intergenic 30.0%
! GAGTATGTTGATGAGATTTA+TGG - chr1.4:64513526-64513545 MS.gene07605:CDS 30.0%
! TATTTGAGATGGTGTTGAAT+TGG + chr1.4:64512430-64512449 None:intergenic 30.0%
!! TTATTATGGTTTGGTTGGTA+CGG - chr1.4:64513100-64513119 MS.gene07605:CDS 30.0%
ATAAGCTGAGAAGAGAAGAT+AGG + chr1.4:64512486-64512505 None:intergenic 35.0%
ATATGAGATATGCCACGAAT+TGG + chr1.4:64512805-64512824 None:intergenic 35.0%
CCCAAATAAAACATCACCAT+CGG + chr1.4:64512912-64512931 None:intergenic 35.0%
GAAATTGTTGAGGATATCGA+GGG - chr1.4:64513681-64513700 MS.gene07605:CDS 35.0%
GAAGTATGATGATCCATTAG+AGG - chr1.4:64513438-64513457 MS.gene07605:CDS 35.0%
GACGAGTCTATTAGGAAATT+AGG - chr1.4:64513775-64513794 MS.gene07605:CDS 35.0%
GTCAGTGAGTTTATTTGAGA+TGG + chr1.4:64512441-64512460 None:intergenic 35.0%
TATGAGATATGCCACGAATT+GGG + chr1.4:64512804-64512823 None:intergenic 35.0%
TGAAATTGTTGAGGATATCG+AGG - chr1.4:64513680-64513699 MS.gene07605:CDS 35.0%
TTTACGGGATTGTTTGCAAA+GGG - chr1.4:64513502-64513521 MS.gene07605:CDS 35.0%
! ATAGGTGTTGTCTATTGCAT+AGG + chr1.4:64512468-64512487 None:intergenic 35.0%
! CATGATGTTCATGGTGTTTT+TGG + chr1.4:64512564-64512583 None:intergenic 35.0%
!! ACCGATGGTGATGTTTTATT+TGG - chr1.4:64512908-64512927 MS.gene07605:CDS 35.0%
!! TATTATGGTTTGGTTGGTAC+GGG - chr1.4:64513101-64513120 MS.gene07605:CDS 35.0%
!! TTGAGGTGTTGGTTATTTGT+GGG - chr1.4:64513611-64513630 MS.gene07605:CDS 35.0%
!!! ACAATGGTGCCGTTATTTTA+TGG - chr1.4:64513646-64513665 MS.gene07605:CDS 35.0%
!!! CAATGGTGCCGTTATTTTAT+GGG - chr1.4:64513647-64513666 MS.gene07605:CDS 35.0%
!!! CCGATGGTGATGTTTTATTT+GGG - chr1.4:64512909-64512928 MS.gene07605:CDS 35.0%
AAATAACGGCACCATTGTGA+CGG + chr1.4:64513644-64513663 None:intergenic 40.0%
AACAAGTGTCACAACGACAT+TGG - chr1.4:64513216-64513235 MS.gene07605:CDS 40.0%
AACGATGGGGTAAACAAAAC+CGG + chr1.4:64512843-64512862 None:intergenic 40.0%
AACGGTTATTAGTTGGACAC+TGG - chr1.4:64513275-64513294 MS.gene07605:CDS 40.0%
AATCCCTTAGACCGAAAAAG+TGG + chr1.4:64512685-64512704 None:intergenic 40.0%
ACAGCTTCTTTCTCTACCAA+TGG - chr1.4:64512726-64512745 MS.gene07605:CDS 40.0%
AGGAAGATGACGAGTCTATT+AGG - chr1.4:64513767-64513786 MS.gene07605:CDS 40.0%
ATTGGTGAGCATGATGTTCA+TGG + chr1.4:64512573-64512592 None:intergenic 40.0%
CAGCTTCTTTCTCTACCAAT+GGG - chr1.4:64512727-64512746 MS.gene07605:CDS 40.0%
GTTTACGGGATTGTTTGCAA+AGG - chr1.4:64513501-64513520 MS.gene07605:CDS 40.0%
TATTATGGGTAGGATTGAGC+CGG - chr1.4:64513801-64513820 MS.gene07605:CDS 40.0%
TTACGGGATTGTTTGCAAAG+GGG - chr1.4:64513503-64513522 MS.gene07605:CDS 40.0%
TTGATGAGATTTATGGGTCC+GGG - chr1.4:64513533-64513552 MS.gene07605:CDS 40.0%
TTGTTCTGTTGTGGAACCAT+GGG - chr1.4:64513348-64513367 MS.gene07605:CDS 40.0%
! GTTGATGAGATTTATGGGTC+CGG - chr1.4:64513532-64513551 MS.gene07605:CDS 40.0%
! TATGGTCAATGGAGTGCTAT+TGG - chr1.4:64513190-64513209 MS.gene07605:CDS 40.0%
!! GTTGAGGTGTTGGTTATTTG+TGG - chr1.4:64513610-64513629 MS.gene07605:CDS 40.0%
!! TTATGGGGGGCATTTATAGA+AGG - chr1.4:64512992-64513011 MS.gene07605:CDS 40.0%
!!! GGTGATGTTTTATTTGGGTC+CGG - chr1.4:64512914-64512933 MS.gene07605:CDS 40.0%
AAACCCAATGCGAAACGATG+GGG + chr1.4:64512856-64512875 None:intergenic 45.0%
AACAAACCCACACACAATCG+CGG + chr1.4:64513374-64513393 None:intergenic 45.0%
AACTGCAGGTTGTTCTGTTG+TGG - chr1.4:64513339-64513358 MS.gene07605:CDS 45.0%
ACCGGCAAAGTCAATAACAC+CGG + chr1.4:64512936-64512955 None:intergenic 45.0%
ATGGACTTGACTAGACATGG+TGG - chr1.4:64513721-64513740 MS.gene07605:CDS 45.0%
CAAACCCAATGCGAAACGAT+GGG + chr1.4:64512857-64512876 None:intergenic 45.0%
CACTGGAATGACGTGTGTAA+CGG - chr1.4:64513292-64513311 MS.gene07605:CDS 45.0%
CCACCCATCAACAATCCATA+CGG + chr1.4:64513562-64513581 None:intergenic 45.0%
GAATTGGGTTCTCTCTGCAA+TGG + chr1.4:64512789-64512808 None:intergenic 45.0%
GACGTGTGTAACGGTTTACT+TGG - chr1.4:64513301-64513320 MS.gene07605:CDS 45.0%
GAGAAAGAAGCTGTAGTCAC+CGG + chr1.4:64512720-64512739 None:intergenic 45.0%
GTCCTTTCAATGCAACAGAC+CGG + chr1.4:64513048-64513067 None:intergenic 45.0%
GTGTGTAACGGTTTACTTGG+CGG - chr1.4:64513304-64513323 MS.gene07605:CDS 45.0%
GTTGTTCTGTTGTGGAACCA+TGG - chr1.4:64513347-64513366 MS.gene07605:CDS 45.0%
TACGGGATTGTTTGCAAAGG+GGG - chr1.4:64513504-64513523 MS.gene07605:CDS 45.0%
TGCTTATGCGTATCATGACG+AGG - chr1.4:64513747-64513766 MS.gene07605:CDS 45.0%
TGGACTTGACTAGACATGGT+GGG - chr1.4:64513722-64513741 MS.gene07605:CDS 45.0%
TTACCCCATCGTTTCGCATT+GGG - chr1.4:64512850-64512869 MS.gene07605:CDS 45.0%
TTTACCCCATCGTTTCGCAT+TGG - chr1.4:64512849-64512868 MS.gene07605:CDS 45.0%
! AGGCCGTATGGATTGTTGAT+GGG - chr1.4:64513556-64513575 MS.gene07605:CDS 45.0%
! GGTGTTGTCTATTGCATAGG+TGG + chr1.4:64512465-64512484 None:intergenic 45.0%
! GGTTTTGCTGCTATAACTGC+AGG - chr1.4:64513325-64513344 MS.gene07605:CDS 45.0%
! TATGGATTGTTGATGGGTGG+TGG - chr1.4:64513562-64513581 MS.gene07605:CDS 45.0%
! TGGTGTTGAATTGGGTGCAT+AGG + chr1.4:64512421-64512440 None:intergenic 45.0%
!! AGGTGTTGGTTATTTGTGGG+TGG - chr1.4:64513614-64513633 MS.gene07605:CDS 45.0%
!! GATTGTGTGTGGGTTTGTTG+CGG - chr1.4:64513375-64513394 MS.gene07605:CDS 45.0%
!! GGTGTTGGTTATTTGTGGGT+GGG - chr1.4:64513615-64513634 MS.gene07605:CDS 45.0%
!! GTTATTGACTTTGCCGGTTC+AGG - chr1.4:64512938-64512957 MS.gene07605:CDS 45.0%
!! TCCGGTGTTATTGACTTTGC+CGG - chr1.4:64512932-64512951 MS.gene07605:CDS 45.0%
!!! GTTTTTGGCTCTAACAGAGC+CGG + chr1.4:64512549-64512568 None:intergenic 45.0%
AAGAAGCTGTAGTCACCGGA+AGG + chr1.4:64512716-64512735 None:intergenic 50.0%
AATGGAGCCACTGGTGATAC+CGG + chr1.4:64512771-64512790 None:intergenic 50.0%
AGCCGAAGAGATAGTAGGAG+AGG + chr1.4:64512619-64512638 None:intergenic 50.0%
AGCGAAGCCGAAGAGATAGT+AGG + chr1.4:64512624-64512643 None:intergenic 50.0%
AGGGATTACCCTTCACCTTC+CGG - chr1.4:64512698-64512717 MS.gene07605:CDS 50.0%
AGTGTCACAACGACATTGGC+TGG - chr1.4:64513220-64513239 MS.gene07605:CDS 50.0%
ATGAGATTTATGGGTCCGGG+AGG - chr1.4:64513536-64513555 MS.gene07605:CDS 50.0%
CATGTGAACCACACCTGAAC+CGG + chr1.4:64512954-64512973 None:intergenic 50.0%
CCAAACCCAATGCGAAACGA+TGG + chr1.4:64512858-64512877 None:intergenic 50.0%
CCATCGTTTCGCATTGGGTT+TGG - chr1.4:64512855-64512874 MS.gene07605:CDS 50.0%
CCCTTAGACCGAAAAAGTGG+CGG + chr1.4:64512682-64512701 None:intergenic 50.0%
CTAGAATAGGGCGATTCGAC+CGG - chr1.4:64513017-64513036 MS.gene07605:CDS 50.0%
GCACCCTCCAATGGTTTCAT+CGG - chr1.4:64512656-64512675 MS.gene07605:CDS 50.0%
GGCCTCTCCTACTATCTCTT+CGG - chr1.4:64512614-64512633 MS.gene07605:CDS 50.0%
GGGTGGTATAGCAGGGTTAT+GGG - chr1.4:64512976-64512995 MS.gene07605:CDS 50.0%
GGTGCATAGGTAGTCTGCAA+CGG + chr1.4:64512408-64512427 None:intergenic 50.0%
GGTGGTATAGCAGGGTTATG+GGG - chr1.4:64512977-64512996 MS.gene07605:CDS 50.0%
GTGGTATAGCAGGGTTATGG+GGG - chr1.4:64512978-64512997 MS.gene07605:CDS 50.0%
TCAGGTGTGGTTCACATGGT+GGG - chr1.4:64512956-64512975 MS.gene07605:CDS 50.0%
TGCAGAGAGAACCCAATTCG+TGG - chr1.4:64512790-64512809 MS.gene07605:CDS 50.0%
TGGGTGGTATAGCAGGGTTA+TGG - chr1.4:64512975-64512994 MS.gene07605:CDS 50.0%
TGGTATAGCAGGGTTATGGG+GGG - chr1.4:64512979-64512998 MS.gene07605:CDS 50.0%
TGTAACTGCGCAGCCTCTAA+TGG + chr1.4:64513454-64513473 None:intergenic 50.0%
TGTAGTCACCGGAAGGTGAA+GGG + chr1.4:64512709-64512728 None:intergenic 50.0%
TTAGAGGCTGCGCAGTTACA+CGG - chr1.4:64513454-64513473 MS.gene07605:CDS 50.0%
TTCAGGTGTGGTTCACATGG+TGG - chr1.4:64512955-64512974 MS.gene07605:CDS 50.0%
! CACACTGAAGGTGCACTGAT+TGG + chr1.4:64513871-64513890 None:intergenic 50.0%
! CCGTATGGATTGTTGATGGG+TGG - chr1.4:64513559-64513578 MS.gene07605:CDS 50.0%
! GAGGCCGTATGGATTGTTGA+TGG - chr1.4:64513555-64513574 MS.gene07605:CDS 50.0%
! GGGATGGACTTGACTAGACA+TGG - chr1.4:64513718-64513737 MS.gene07605:CDS 50.0%
! TTAGTCTTCGCCATGCAGCT+TGG - chr1.4:64512506-64512525 MS.gene07605:CDS 50.0%
!! ACATGGTGGGTGGTATAGCA+GGG - chr1.4:64512969-64512988 MS.gene07605:CDS 50.0%
!! GATTGTTGATGGGTGGTGGA+GGG - chr1.4:64513566-64513585 MS.gene07605:CDS 50.0%
!! TGCATGGGGGGTGTTGTTTA+CGG - chr1.4:64513486-64513505 MS.gene07605:CDS 50.0%
!!! CCGCCACTTTTTCGGTCTAA+GGG - chr1.4:64512679-64512698 MS.gene07605:CDS 50.0%
!!! TTCATCGGCCGCCACTTTTT+CGG - chr1.4:64512671-64512690 MS.gene07605:CDS 50.0%
!!! TTGCGGCGTGGGTTTTGATT+GGG - chr1.4:64513392-64513411 MS.gene07605:CDS 50.0%
CAACAATCCATACGGCCTCC+CGG + chr1.4:64513554-64513573 None:intergenic 55.0%
CATGGCGAAACCAAGCTGCA+TGG + chr1.4:64512519-64512538 None:intergenic 55.0%
CGAGGGATGATGAGACTGCA+GGG - chr1.4:64513698-64513717 MS.gene07605:CDS 55.0%
CGGCCGATGAAACCATTGGA+GGG + chr1.4:64512662-64512681 None:intergenic 55.0%
CGGTCGAATCGCCCTATTCT+AGG + chr1.4:64513019-64513038 None:intergenic 55.0%
CGGTTCAGGTGTGGTTCACA+TGG - chr1.4:64512952-64512971 MS.gene07605:CDS 55.0%
CTGTAGTCACCGGAAGGTGA+AGG + chr1.4:64512710-64512729 None:intergenic 55.0%
GAAAGGACATAGCGCGTCGT+TGG - chr1.4:64513060-64513079 MS.gene07605:CDS 55.0%
GAGATAGTAGGAGAGGCCAC+CGG + chr1.4:64512612-64512631 None:intergenic 55.0%
GCATAGGTAGTCTGCAACGG+CGG + chr1.4:64512405-64512424 None:intergenic 55.0%
GGATGATGAGACTGCAGGGA+TGG - chr1.4:64513702-64513721 MS.gene07605:CDS 55.0%
GGCCGGTCTGTTGCATTGAA+AGG - chr1.4:64513043-64513062 MS.gene07605:CDS 55.0%
TCGAGGGATGATGAGACTGC+AGG - chr1.4:64513697-64513716 MS.gene07605:CDS 55.0%
TCTCTCTGCAATGGAGCCAC+TGG + chr1.4:64512780-64512799 None:intergenic 55.0%
TGGTGGAGGGAGGTTGTTTG+CGG - chr1.4:64513579-64513598 MS.gene07605:CDS 55.0%
TTCGGCTTCGCTTTCGCCTT+TGG - chr1.4:64512632-64512651 MS.gene07605:CDS 55.0%
! CATTGGGTTTGGTCTGCCGA+TGG - chr1.4:64512866-64512885 MS.gene07605:CDS 55.0%
! GGATTGTTGATGGGTGGTGG+AGG - chr1.4:64513565-64513584 MS.gene07605:CDS 55.0%
! GGTTTGGTCTGCCGATGGTT+GGG - chr1.4:64512871-64512890 MS.gene07605:CDS 55.0%
! TAGCGTTTGCAGTGGTGGTG+AGG + chr1.4:64512382-64512401 None:intergenic 55.0%
! TTGCAGTGGTGGTGAGGAGT+GGG + chr1.4:64512376-64512395 None:intergenic 55.0%
! TTTGCAGTGGTGGTGAGGAG+TGG + chr1.4:64512377-64512396 None:intergenic 55.0%
!! ACATCACCATCGGTTCGCGT+TGG + chr1.4:64512902-64512921 None:intergenic 55.0%
!! ACCATTGGAGGGTGCTCCAA+AGG + chr1.4:64512651-64512670 None:intergenic 55.0%
!! CACATGGTGGGTGGTATAGC+AGG - chr1.4:64512968-64512987 MS.gene07605:CDS 55.0%
!! CATCACCATCGGTTCGCGTT+GGG + chr1.4:64512901-64512920 None:intergenic 55.0%
!! GAAGGTGCACTGATTGGCAC+CGG + chr1.4:64513865-64513884 None:intergenic 55.0%
!! GCATGGGGGGTGTTGTTTAC+GGG - chr1.4:64513487-64513506 MS.gene07605:CDS 55.0%
!! GTTGCGGCGTGGGTTTTGAT+TGG - chr1.4:64513391-64513410 MS.gene07605:CDS 55.0%
!! TGACTTTGCCGGTTCAGGTG+TGG - chr1.4:64512943-64512962 MS.gene07605:CDS 55.0%
!! TGGGTGGGTTACCGTCACAA+TGG - chr1.4:64513630-64513649 MS.gene07605:CDS 55.0%
!!! GCCGCCACTTTTTCGGTCTA+AGG - chr1.4:64512678-64512697 MS.gene07605:CDS 55.0%
AACAGAGCCGGCACAGAGCA+TGG + chr1.4:64512537-64512556 None:intergenic 60.0%
AACGGCGGTAGCGTTTGCAG+TGG + chr1.4:64512390-64512409 None:intergenic 60.0%
AATGTCCTCGACGCTGCAGC+CGG - chr1.4:64512590-64512609 MS.gene07605:CDS 60.0%
AGGACATAGCGCGTCGTTGG+TGG - chr1.4:64513063-64513082 MS.gene07605:CDS 60.0%
AGGCTGCGCAGTTACACGGA+GGG - chr1.4:64513458-64513477 MS.gene07605:CDS 60.0%
AGTGTGTCTCCCTCTGCCAC+CGG - chr1.4:64513829-64513848 MS.gene07605:CDS 60.0%
ATAGGGCGATTCGACCGGAC+AGG - chr1.4:64513022-64513041 MS.gene07605:CDS 60.0%
ATGCAACAGACCGGCCTGTC+CGG + chr1.4:64513039-64513058 None:intergenic 60.0%
CATGGGCCGCGATTGTGTGT+GGG - chr1.4:64513365-64513384 MS.gene07605:CDS 60.0%
GCGGCCGATGAAACCATTGG+AGG + chr1.4:64512663-64512682 None:intergenic 60.0%
GGTTTCGCCATGCTCTGTGC+CGG - chr1.4:64512527-64512546 MS.gene07605:CDS 60.0%
GTATCGTGTCCGGTGGCAGA+GGG + chr1.4:64513841-64513860 None:intergenic 60.0%
GTGGCGGCCGATGAAACCAT+TGG + chr1.4:64512666-64512685 None:intergenic 60.0%
TGCCACCGGACACGATACAC+CGG - chr1.4:64513843-64513862 MS.gene07605:CDS 60.0%
TGTATCGTGTCCGGTGGCAG+AGG + chr1.4:64513842-64513861 None:intergenic 60.0%
! GGGTTTGGTCTGCCGATGGT+TGG - chr1.4:64512870-64512889 MS.gene07605:CDS 60.0%
! GGTGTGGTTCACATGGTGGG+TGG - chr1.4:64512959-64512978 MS.gene07605:CDS 60.0%
! GGTTGGTACGGGTTCAACCC+CGG - chr1.4:64513112-64513131 MS.gene07605:CDS 60.0%
! TGCAGTGGTGGTGAGGAGTG+GGG + chr1.4:64512375-64512394 None:intergenic 60.0%
!! AGCGCGTCGTTGGTGGTGTT+GGG - chr1.4:64513070-64513089 MS.gene07605:CDS 60.0%
!! GCCTTTGGAGCACCCTCCAA+TGG - chr1.4:64512647-64512666 MS.gene07605:CDS 60.0%
!! GTGTGGGTTTGTTGCGGCGT+GGG - chr1.4:64513381-64513400 MS.gene07605:CDS 60.0%
!! TAGCGCGTCGTTGGTGGTGT+TGG - chr1.4:64513069-64513088 MS.gene07605:CDS 60.0%
!! TGGCACCGGTGTATCGTGTC+CGG + chr1.4:64513851-64513870 None:intergenic 60.0%
!! TGTGTGGGTTTGTTGCGGCG+TGG - chr1.4:64513380-64513399 MS.gene07605:CDS 60.0%
!! TGTTGATGGGTGGTGGAGGG+AGG - chr1.4:64513569-64513588 MS.gene07605:CDS 60.0%
AGGGAGGTTGTTTGCGGCGC+AGG - chr1.4:64513585-64513604 MS.gene07605:CDS 65.0%
CACCGGTGTATCGTGTCCGG+TGG + chr1.4:64513848-64513867 None:intergenic 65.0%
CAGCGATGGCGAAGGCCCAT+TGG + chr1.4:64512745-64512764 None:intergenic 65.0%
CCACACACAATCGCGGCCCA+TGG + chr1.4:64513367-64513386 None:intergenic 65.0%
CCATGGGCCGCGATTGTGTG+TGG - chr1.4:64513364-64513383 MS.gene07605:CDS 65.0%
GAGGCTGCGCAGTTACACGG+AGG - chr1.4:64513457-64513476 MS.gene07605:CDS 65.0%
GAGGGAGACACACTCGTGGC+CGG + chr1.4:64513823-64513842 None:intergenic 65.0%
GAGGTTGTTTGCGGCGCAGG+TGG - chr1.4:64513588-64513607 MS.gene07605:CDS 65.0%
GCGCAGTTACACGGAGGGTG+CGG - chr1.4:64513463-64513482 MS.gene07605:CDS 65.0%
GCTGCTGCCGGTATCACCAG+TGG - chr1.4:64512761-64512780 MS.gene07605:CDS 65.0%
GGCAGAGGGAGACACACTCG+TGG + chr1.4:64513827-64513846 None:intergenic 65.0%
GGCGCAGGTGGTTGAGGTGT+TGG - chr1.4:64513600-64513619 MS.gene07605:CDS 65.0%
GGCGGTAGCGTTTGCAGTGG+TGG + chr1.4:64512387-64512406 None:intergenic 65.0%
GGTGATACCGGCAGCAGCGA+TGG + chr1.4:64512759-64512778 None:intergenic 65.0%
GTTTGCGGCGCAGGTGGTTG+AGG - chr1.4:64513594-64513613 MS.gene07605:CDS 65.0%
TATGGGTCCGGGAGGCCGTA+TGG - chr1.4:64513544-64513563 MS.gene07605:CDS 65.0%
! ACACGGAGGGTGCGGTGCAT+GGG - chr1.4:64513471-64513490 MS.gene07605:CDS 65.0%
! GGCTGCAGCGTCGAGGACAT+TGG + chr1.4:64512591-64512610 None:intergenic 65.0%
! TACACGGAGGGTGCGGTGCA+TGG - chr1.4:64513470-64513489 MS.gene07605:CDS 65.0%
!! ACCATCGGTTCGCGTTGGGC+TGG + chr1.4:64512897-64512916 None:intergenic 65.0%
!! CGTTGGGCTGGCCCAACCAT+CGG + chr1.4:64512885-64512904 None:intergenic 65.0%
ACCGGCAGCAGCGATGGCGA+AGG + chr1.4:64512753-64512772 None:intergenic 70.0%
GAGGAGTGGGGCGAGGTCTG+TGG + chr1.4:64512363-64512382 None:intergenic 70.0%
GCCAGCCCAACGCGAACCGA+TGG - chr1.4:64512893-64512912 MS.gene07605:CDS 70.0%
GCCTTCGCCATCGCTGCTGC+CGG - chr1.4:64512749-64512768 MS.gene07605:CDS 70.0%
GGCGATTCGACCGGACAGGC+CGG - chr1.4:64513026-64513045 MS.gene07605:CDS 70.0%
! ACGGAGGGTGCGGTGCATGG+GGG - chr1.4:64513473-64513492 MS.gene07605:CDS 70.0%
! CACGGAGGGTGCGGTGCATG+GGG - chr1.4:64513472-64513491 MS.gene07605:CDS 70.0%
! TGGTGGTGAGGAGTGGGGCG+AGG + chr1.4:64512370-64512389 None:intergenic 70.0%
GTCCTCGACGCTGCAGCCGG+TGG - chr1.4:64512593-64512612 MS.gene07605:CDS 75.0%
! CGGAGGGTGCGGTGCATGGG+GGG - chr1.4:64513474-64513493 MS.gene07605:CDS 75.0%
!! GGCCACCGGCTGCAGCGTCG+AGG + chr1.4:64512598-64512617 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 64512338 64513891 64512338 ID=MS.gene07605
chr1.4 mRNA 64512338 64513891 64512338 ID=MS.gene07605.t1;Parent=MS.gene07605
chr1.4 exon 64512338 64513891 64512338 ID=MS.gene07605.t1.exon1;Parent=MS.gene07605.t1
chr1.4 CDS 64512338 64513891 64512338 ID=cds.MS.gene07605.t1;Parent=MS.gene07605.t1
Gene Sequence

>MS.gene07605

ATGGCTTCTCTATCTTGCTCAGCCACAGACCTCGCCCCACTCCTCACCACCACTGCAAACGCTACCGCCGTTGCAGACTACCTATGCACCCAATTCAACACCATCTCAAATAAACTCACTGACACCACCTATGCAATAGACAACACCTATCTTCTCTTCTCAGCTTATTTAGTCTTCGCCATGCAGCTTGGTTTCGCCATGCTCTGTGCCGGCTCTGTTAGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCAGCCGGTGGCCTCTCCTACTATCTCTTCGGCTTCGCTTTCGCCTTTGGAGCACCCTCCAATGGTTTCATCGGCCGCCACTTTTTCGGTCTAAGGGATTACCCTTCACCTTCCGGTGACTACAGCTTCTTTCTCTACCAATGGGCCTTCGCCATCGCTGCTGCCGGTATCACCAGTGGCTCCATTGCAGAGAGAACCCAATTCGTGGCATATCTCATATATTCTTCTTTCTTAACCGGTTTTGTTTACCCCATCGTTTCGCATTGGGTTTGGTCTGCCGATGGTTGGGCCAGCCCAACGCGAACCGATGGTGATGTTTTATTTGGGTCCGGTGTTATTGACTTTGCCGGTTCAGGTGTGGTTCACATGGTGGGTGGTATAGCAGGGTTATGGGGGGCATTTATAGAAGGTCCTAGAATAGGGCGATTCGACCGGACAGGCCGGTCTGTTGCATTGAAAGGACATAGCGCGTCGTTGGTGGTGTTGGGTTCTTTTTTATTATGGTTTGGTTGGTACGGGTTCAACCCCGGTTCATTTTTAACAATTGCAAAAAGCTATGGAAATATGAGTAACAAAAGGAATTATTATGGTCAATGGAGTGCTATTGGAAGAACAAGTGTCACAACGACATTGGCTGGATGCACTGCAGCTTTAACAACTTTGTTTAGTAAACGGTTATTAGTTGGACACTGGAATGACGTGTGTAACGGTTTACTTGGCGGTTTTGCTGCTATAACTGCAGGTTGTTCTGTTGTGGAACCATGGGCCGCGATTGTGTGTGGGTTTGTTGCGGCGTGGGTTTTGATTGGGCTTAATAAATTGGCGATTAATGTGAAGTATGATGATCCATTAGAGGCTGCGCAGTTACACGGAGGGTGCGGTGCATGGGGGGTGTTGTTTACGGGATTGTTTGCAAAGGGGGAGTATGTTGATGAGATTTATGGGTCCGGGAGGCCGTATGGATTGTTGATGGGTGGTGGAGGGAGGTTGTTTGCGGCGCAGGTGGTTGAGGTGTTGGTTATTTGTGGGTGGGTTACCGTCACAATGGTGCCGTTATTTTATGGGCTGAATAAGATGAAATTGTTGAGGATATCGAGGGATGATGAGACTGCAGGGATGGACTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGACGAGGAAGATGACGAGTCTATTAGGAAATTAGGGTTTATTATGGGTAGGATTGAGCCGGCCACGAGTGTGTCTCCCTCTGCCACCGGACACGATACACCGGTGCCAATCAGTGCACCTTCAGTGTGA

Protein sequence

>MS.gene07605.t1

MASLSCSATDLAPLLTTTANATAVADYLCTQFNTISNKLTDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKSYGNMSNKRNYYGQWSAIGRTSVTTTLAGCTAALTTLFSKRLLVGHWNDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAINVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGSGRPYGLLMGGGGRLFAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKLGFIMGRIEPATSVSPSATGHDTPVPISAPSV