Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058774.t1 | XP_003590923.2 | 97.3 | 519 | 14 | 0 | 1 | 519 | 1 | 519 | 5.30E-275 | 956.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058774.t1 | O04161 | 75.9 | 515 | 119 | 3 | 2 | 514 | 3 | 514 | 4.6e-211 | 735.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058774.t1 | G7I667 | 97.3 | 519 | 14 | 0 | 1 | 519 | 1 | 519 | 3.8e-275 | 956.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057992 | MS.gene058774 | -0.801838 | 7.45E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene058775 | 0.988689 | 5.17E-175 | -1.69E-46 |
| MS.gene058774 | MS.gene058777 | 0.97265 | 4.11E-135 | -1.69E-46 |
| MS.gene058774 | MS.gene062925 | 0.80555 | 1.26E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene064971 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene070735 | -0.835605 | 1.52E-56 | -1.69E-46 |
| MS.gene058774 | MS.gene071900 | 0.873344 | 1.58E-67 | -1.69E-46 |
| MS.gene058774 | MS.gene071901 | 0.856402 | 3.30E-62 | -1.69E-46 |
| MS.gene058774 | MS.gene072871 | 0.830721 | 2.50E-55 | -1.69E-46 |
| MS.gene058774 | MS.gene07349 | 0.843662 | 1.22E-58 | -1.69E-46 |
| MS.gene058774 | MS.gene07605 | 0.857091 | 2.07E-62 | -1.69E-46 |
| MS.gene058774 | MS.gene20892 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene058774 | MS.gene23352 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene38046 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene45736 | 0.802048 | 6.75E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene47475 | 0.800652 | 1.30E-48 | -1.69E-46 |
| MS.gene058774 | MS.gene48012 | 0.823191 | 1.58E-53 | -1.69E-46 |
| MS.gene058774 | MS.gene50709 | 0.801159 | 1.03E-48 | -1.69E-46 |
| MS.gene058774 | MS.gene53614 | 0.822756 | 2.00E-53 | -1.69E-46 |
| MS.gene058774 | MS.gene62198 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene058774 | MS.gene63367 | -0.818892 | 1.55E-52 | -1.69E-46 |
| MS.gene058774 | MS.gene63951 | 0.802569 | 5.27E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene68124 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene058774 | MS.gene68126 | 0.834689 | 2.59E-56 | -1.69E-46 |
| MS.gene058774 | MS.gene74897 | 0.8208 | 5.66E-53 | -1.69E-46 |
| MS.gene058774 | MS.gene80234 | 0.824414 | 8.18E-54 | -1.69E-46 |
| MS.gene058774 | MS.gene94986 | 0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene058774 | MS.gene94987 | 0.800717 | 1.26E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29346 | MS.gene058774 | PPI |
| MS.gene018612 | MS.gene058774 | PPI |
| MS.gene058774 | MS.gene073930 | PPI |
| MS.gene064902 | MS.gene058774 | PPI |
| MS.gene53559 | MS.gene058774 | PPI |
| MS.gene050886 | MS.gene058774 | PPI |
| MS.gene09908 | MS.gene058774 | PPI |
| MS.gene072479 | MS.gene058774 | PPI |
| MS.gene018613 | MS.gene058774 | PPI |
| MS.gene058774 | MS.gene68389 | PPI |
| MS.gene78590 | MS.gene058774 | PPI |
| MS.gene061826 | MS.gene058774 | PPI |
| MS.gene058774 | MS.gene23538 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058774.t1 | MTR_1g079760 | 97.303 | 519 | 14 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1025 |
| MS.gene058774.t1 | MTR_1g045550 | 73.281 | 509 | 124 | 5 | 1 | 506 | 1 | 500 | 0.0 | 744 |
| MS.gene058774.t1 | MTR_7g098930 | 72.912 | 491 | 127 | 3 | 1 | 489 | 1 | 487 | 0.0 | 719 |
| MS.gene058774.t1 | MTR_7g113340 | 71.984 | 489 | 131 | 3 | 1 | 487 | 1 | 485 | 0.0 | 707 |
| MS.gene058774.t1 | MTR_3g463730 | 67.038 | 449 | 137 | 4 | 40 | 484 | 7 | 448 | 0.0 | 595 |
| MS.gene058774.t1 | MTR_7g115050 | 28.608 | 388 | 217 | 14 | 112 | 479 | 100 | 447 | 5.84e-26 | 111 |
| MS.gene058774.t1 | MTR_1g036410 | 25.107 | 466 | 282 | 15 | 47 | 484 | 24 | 450 | 7.52e-21 | 95.9 |
| MS.gene058774.t1 | MTR_8g074750 | 25.304 | 494 | 298 | 17 | 47 | 515 | 30 | 477 | 5.32e-20 | 93.2 |
| MS.gene058774.t1 | MTR_7g069640 | 26.526 | 475 | 282 | 14 | 47 | 487 | 22 | 463 | 5.63e-17 | 84.0 |
| MS.gene058774.t1 | MTR_4g017820 | 27.439 | 492 | 290 | 17 | 47 | 506 | 22 | 478 | 3.32e-16 | 81.6 |
| MS.gene058774.t1 | MTR_8g095040 | 24.947 | 473 | 290 | 12 | 47 | 487 | 29 | 468 | 1.39e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058774.t1 | AT1G64780 | 77.148 | 512 | 106 | 6 | 2 | 506 | 4 | 511 | 0.0 | 782 |
| MS.gene058774.t1 | AT4G13510 | 74.074 | 513 | 119 | 7 | 4 | 514 | 1 | 501 | 0.0 | 756 |
| MS.gene058774.t1 | AT3G24300 | 73.123 | 506 | 119 | 4 | 3 | 506 | 4 | 494 | 0.0 | 742 |
| MS.gene058774.t1 | AT3G24290 | 74.948 | 483 | 112 | 4 | 3 | 483 | 4 | 479 | 0.0 | 724 |
| MS.gene058774.t1 | AT4G28700 | 72.189 | 507 | 129 | 6 | 2 | 501 | 3 | 504 | 0.0 | 702 |
| MS.gene058774.t1 | AT2G38290 | 26.078 | 464 | 288 | 13 | 47 | 488 | 20 | 450 | 3.42e-22 | 100 |
| MS.gene058774.t1 | AT2G38290 | 26.870 | 361 | 224 | 10 | 135 | 488 | 7 | 334 | 8.40e-20 | 91.7 |
Find 196 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGTTGATGAGATTTA+TGG | 0.173966 | 1.4:+64734326 | MS.gene058774:CDS |
| GACGAGTCTATTAGGAAATT+AGG | 0.214176 | 1.4:+64734575 | MS.gene058774:CDS |
| TTTGATTGGGCTTAATAAAT+TGG | 0.218891 | 1.4:+64734205 | MS.gene058774:CDS |
| GCTTAATAAATTGGCGATTA+AGG | 0.220724 | 1.4:+64734214 | MS.gene058774:CDS |
| GGCCTCTCCTACTATCTATT+TGG | 0.247116 | 1.4:+64733408 | MS.gene058774:CDS |
| TTTGGCTTTGCTTTCGCCTT+TGG | 0.288902 | 1.4:+64733426 | MS.gene058774:CDS |
| GTTATTGACTTTGCCGGTTC+AGG | 0.294088 | 1.4:+64733732 | MS.gene058774:CDS |
| GGGTGGTATAGCAGGGTTAT+GGG | 0.312935 | 1.4:+64733770 | MS.gene058774:CDS |
| CGGTCGAACCGCCCTATTCT+AGG | 0.319056 | 1.4:-64733810 | None:intergenic |
| TCCGGTGTTATTGACTTTGC+CGG | 0.323221 | 1.4:+64733726 | MS.gene058774:CDS |
| TATGGTCAATGGAGTGCTAT+TGG | 0.333213 | 1.4:+64733984 | MS.gene058774:CDS |
| AAGGGATTACCCTTCACCTT+CGG | 0.337397 | 1.4:+64733491 | MS.gene058774:CDS |
| AGGGAGGTTGTTTGCGGCGC+AGG | 0.338172 | 1.4:+64734385 | MS.gene058774:CDS |
| CACGGAGGGTGTGGCGCATG+GGG | 0.339247 | 1.4:+64734272 | MS.gene058774:CDS |
| CACATGGTGGGTGGTATAGC+AGG | 0.340009 | 1.4:+64733762 | MS.gene058774:CDS |
| AGGAAGATGACGAGTCTATT+AGG | 0.343254 | 1.4:+64734567 | MS.gene058774:CDS |
| ACGAGTCTATTAGGAAATTA+GGG | 0.347347 | 1.4:+64734576 | MS.gene058774:CDS |
| TGTAACTGCGCAGCCTCTAA+TGG | 0.347657 | 1.4:-64734251 | None:intergenic |
| AGGGATTACCCTTCACCTTC+GGG | 0.348884 | 1.4:+64733492 | MS.gene058774:CDS |
| CCATCGTTTCGCATTGGGTT+TGG | 0.355981 | 1.4:+64733649 | MS.gene058774:CDS |
| GTTGAGGTGCTGGTTATTTG+TGG | 0.363153 | 1.4:+64734410 | MS.gene058774:CDS |
| ACCATTGGTTCGCGTTGGGC+TGG | 0.366798 | 1.4:-64733688 | None:intergenic |
| TAGCGCGTCGTTGGTGGTGT+TGG | 0.373610 | 1.4:+64733863 | MS.gene058774:CDS |
| TTGCGGTGGTGGTGAGGAGT+GGG | 0.375025 | 1.4:-64733167 | None:intergenic |
| TGCAACGGCGGTTGCGTTTG+CGG | 0.376248 | 1.4:-64733184 | None:intergenic |
| TTGAGGTGCTGGTTATTTGT+GGG | 0.377948 | 1.4:+64734411 | MS.gene058774:CDS |
| AGTATGTTGATGAGATTTAT+GGG | 0.378337 | 1.4:+64734327 | MS.gene058774:CDS |
| GGCGGTTGCGTTTGCGGTGG+TGG | 0.380612 | 1.4:-64733178 | None:intergenic |
| TGGTGGTGAGGAGTGGGGCT+AGG | 0.382794 | 1.4:-64733161 | None:intergenic |
| ATTTGAGATGGTGTTGAATT+GGG | 0.384973 | 1.4:-64733220 | None:intergenic |
| TTACCCCATCGTTTCGCATT+GGG | 0.385239 | 1.4:+64733644 | MS.gene058774:CDS |
| ACACGGAGGGTGTGGCGCAT+GGG | 0.388550 | 1.4:+64734271 | MS.gene058774:CDS |
| TTTATAGAAGGTCCTAGAAT+AGG | 0.393823 | 1.4:+64733798 | MS.gene058774:CDS |
| TTTAGTAAACGGTTATTAGT+TGG | 0.394285 | 1.4:+64734062 | MS.gene058774:CDS |
| TACACGGAGGGTGTGGCGCA+TGG | 0.398795 | 1.4:+64734270 | MS.gene058774:CDS |
| TATTTGAGATGGTGTTGAAT+TGG | 0.400022 | 1.4:-64733221 | None:intergenic |
| TGACAACTTTGTTTAGTAAA+CGG | 0.402627 | 1.4:+64734051 | MS.gene058774:CDS |
| GGTTTGGTCTGCCGATGGTT+GGG | 0.403385 | 1.4:+64733665 | MS.gene058774:CDS |
| TGGGTGGTATAGCAGGGTTA+TGG | 0.404483 | 1.4:+64733769 | MS.gene058774:CDS |
| AGTAACAAAAGGAATTATTA+TGG | 0.405005 | 1.4:+64733966 | MS.gene058774:CDS |
| CATGTGAACCACACCTGAAC+CGG | 0.411513 | 1.4:-64733745 | None:intergenic |
| GGCGCAGGTGGTTGAGGTGC+TGG | 0.412619 | 1.4:+64734400 | MS.gene058774:CDS |
| TATTATGGTTTGGTTGGTAC+GGG | 0.415535 | 1.4:+64733895 | MS.gene058774:CDS |
| TTGATGAGATTTATGGGATA+GGG | 0.415705 | 1.4:+64734333 | MS.gene058774:CDS |
| CGGAGGGTGTGGCGCATGGG+GGG | 0.418635 | 1.4:+64734274 | MS.gene058774:CDS |
| CATCACCATTGGTTCGCGTT+GGG | 0.420093 | 1.4:-64733692 | None:intergenic |
| TTATTATGGTTTGGTTGGTA+CGG | 0.423451 | 1.4:+64733894 | MS.gene058774:CDS |
| AAAAGAAGAATATATGAGAT+AGG | 0.425528 | 1.4:-64733607 | None:intergenic |
| GTGGTATAGCAGGGTTATGG+GGG | 0.427928 | 1.4:+64733772 | MS.gene058774:CDS |
| ACGGAGGGTGTGGCGCATGG+GGG | 0.428519 | 1.4:+64734273 | MS.gene058774:CDS |
| ATGCAACAGACCGGCCTGTC+CGG | 0.429149 | 1.4:-64733830 | None:intergenic |
| AGCGCGTCGTTGGTGGTGTT+GGG | 0.430363 | 1.4:+64733864 | MS.gene058774:CDS |
| TGGAGTGCTATTGGAAGAAC+AGG | 0.430989 | 1.4:+64733993 | MS.gene058774:CDS |
| AAAGGAATTATTATGGTCAA+TGG | 0.435762 | 1.4:+64733973 | MS.gene058774:CDS |
| TGTTGATGGGTGGTGGAGGG+AGG | 0.437827 | 1.4:+64734369 | MS.gene058774:CDS |
| AGGTGCTGGTTATTTGTGGG+TGG | 0.439612 | 1.4:+64734414 | MS.gene058774:CDS |
| GGTGCTGGTTATTTGTGGGT+GGG | 0.440274 | 1.4:+64734415 | MS.gene058774:CDS |
| CAGCGATGGCGAAGGCCCAT+TGG | 0.442094 | 1.4:-64733536 | None:intergenic |
| GGATTGTTGATGGGTGGTGG+AGG | 0.443117 | 1.4:+64734365 | MS.gene058774:CDS |
| GTTGATGAGATTTATGGGAT+AGG | 0.452271 | 1.4:+64734332 | MS.gene058774:CDS |
| CACACTGAAGGTGCACTGAT+TGG | 0.453333 | 1.4:-64734668 | None:intergenic |
| TTTACCCCATCGTTTCGCAT+TGG | 0.453403 | 1.4:+64733643 | MS.gene058774:CDS |
| GGTTTCGCCATGCTCTGCGC+AGG | 0.454596 | 1.4:+64733321 | MS.gene058774:CDS |
| GGTGGTATAGCAGGGTTATG+GGG | 0.457348 | 1.4:+64733771 | MS.gene058774:CDS |
| TTATAGAAGGTCCTAGAATA+GGG | 0.458590 | 1.4:+64733799 | MS.gene058774:CDS |
| GCCTTCGCCATCGCTGCTGC+CGG | 0.459814 | 1.4:+64733543 | MS.gene058774:CDS |
| TGCAGAGAGAACTCAATTTG+TGG | 0.460728 | 1.4:+64733584 | MS.gene058774:CDS |
| GCACCCTCCAACGGCTTCAT+CGG | 0.461259 | 1.4:+64733450 | MS.gene058774:CDS |
| TAGGAAATTAGGGTTTATGA+TGG | 0.464007 | 1.4:+64734586 | MS.gene058774:CDS |
| GATTGTTGATGGGTGGTGGA+GGG | 0.464090 | 1.4:+64734366 | MS.gene058774:CDS |
| TATGGATTGTTGATGGGTGG+TGG | 0.466509 | 1.4:+64734362 | MS.gene058774:CDS |
| GGGTTTGGTCTGCCGATGGT+TGG | 0.467295 | 1.4:+64733664 | MS.gene058774:CDS |
| GTTTGCGGCGCAGGTGGTTG+AGG | 0.472995 | 1.4:+64734394 | MS.gene058774:CDS |
| TGGTGGAGGGAGGTTGTTTG+CGG | 0.475634 | 1.4:+64734379 | MS.gene058774:CDS |
| CTAAATAAGCTGAGAAGAGA+AGG | 0.476158 | 1.4:-64733281 | None:intergenic |
| GTGTGGGTTTGTTGCGGCGT+GGG | 0.479169 | 1.4:+64734181 | MS.gene058774:CDS |
| GTTGTTCTGTTGTGGAACCA+TGG | 0.481083 | 1.4:+64734147 | MS.gene058774:CDS |
| CTAGAATAGGGCGGTTCGAC+CGG | 0.487260 | 1.4:+64733811 | MS.gene058774:CDS |
| AACGATGGGGTAAACAAAAC+CGG | 0.487884 | 1.4:-64733634 | None:intergenic |
| CGTTGGGCTGGCCCAACCAT+CGG | 0.489504 | 1.4:-64733676 | None:intergenic |
| GTCGCTGAGTTTATTTGAGA+TGG | 0.491035 | 1.4:-64733232 | None:intergenic |
| TTTACGGGATTGTTTGCAAA+GGG | 0.491383 | 1.4:+64734302 | MS.gene058774:CDS |
| GAAGTATGATGATCCATTAG+AGG | 0.491623 | 1.4:+64734238 | MS.gene058774:CDS |
| GAGGAGTGGGGCTAGGTCTG+TGG | 0.495166 | 1.4:-64733154 | None:intergenic |
| TCAGGTGTGGTTCACATGGT+GGG | 0.496702 | 1.4:+64733750 | MS.gene058774:CDS |
| TTTGCGGTGGTGGTGAGGAG+TGG | 0.496837 | 1.4:-64733168 | None:intergenic |
| ACAGCTTCTTTCTCTACCAA+TGG | 0.497981 | 1.4:+64733520 | MS.gene058774:CDS |
| GCCGTTGGAGGGTGCTCCAA+AGG | 0.499692 | 1.4:-64733442 | None:intergenic |
| CCATGGGCCGCGATTGTGTG+TGG | 0.504024 | 1.4:+64734164 | MS.gene058774:CDS |
| ATTGGTGAGCATGATGTTCA+TGG | 0.505916 | 1.4:-64733364 | None:intergenic |
| CATTGGGTTTGGTCTGCCGA+TGG | 0.506434 | 1.4:+64733660 | MS.gene058774:CDS |
| ACATCACCATTGGTTCGCGT+TGG | 0.507320 | 1.4:-64733693 | None:intergenic |
| GAGGTTGTTTGCGGCGCAGG+TGG | 0.508529 | 1.4:+64734388 | MS.gene058774:CDS |
| GAAAGGACATAGCGCGTCGT+TGG | 0.508596 | 1.4:+64733854 | MS.gene058774:CDS |
| TCGAGGGATGATGAGACTGC+AGG | 0.509046 | 1.4:+64734497 | MS.gene058774:CDS |
| AGCAAAGCCAAATAGATAGT+AGG | 0.509496 | 1.4:-64733415 | None:intergenic |
| GACGTGTGTAATGGTTTACT+TGG | 0.510713 | 1.4:+64734101 | MS.gene058774:CDS |
| CCACCCATCAACAATCCATA+TGG | 0.510810 | 1.4:-64734359 | None:intergenic |
| TGGCACCGACGTATCGTGTT+CGG | 0.511058 | 1.4:-64734648 | None:intergenic |
| GAGGCCATATGGATTGTTGA+TGG | 0.511702 | 1.4:+64734355 | MS.gene058774:CDS |
| TACGGGATTGTTTGCAAAGG+GGG | 0.512801 | 1.4:+64734304 | MS.gene058774:CDS |
| TATGGGATAGGGAGGCCATA+TGG | 0.515597 | 1.4:+64734344 | MS.gene058774:CDS |
| AACGGAGCCTGCGCAGAGCA+TGG | 0.515746 | 1.4:-64733328 | None:intergenic |
| CAGCTTCTTTCTCTACCAAT+GGG | 0.516999 | 1.4:+64733521 | MS.gene058774:CDS |
| AACTGCAGGTTGTTCTGTTG+TGG | 0.517299 | 1.4:+64734139 | MS.gene058774:CDS |
| AATTAGGGTTTATGATGGGT+AGG | 0.517824 | 1.4:+64734591 | MS.gene058774:CDS |
| ATGGAAATATGAGTAACAAA+AGG | 0.518100 | 1.4:+64733955 | MS.gene058774:CDS |
| GGCCGGTCTGTTGCATTGAA+AGG | 0.519192 | 1.4:+64733837 | MS.gene058774:CDS |
| GCGGCCGATGAAGCCGTTGG+AGG | 0.520644 | 1.4:-64733454 | None:intergenic |
| CGTATCGTGTTCGGTGGCAG+AGG | 0.523564 | 1.4:-64734639 | None:intergenic |
| CGGCCGATGAAGCCGTTGGA+GGG | 0.527370 | 1.4:-64733453 | None:intergenic |
| AATGTCCTCGACGCTGCAGC+CGG | 0.530902 | 1.4:+64733384 | MS.gene058774:CDS |
| TGGTATAGCAGGGTTATGGG+GGG | 0.532932 | 1.4:+64733773 | MS.gene058774:CDS |
| GGTGTCACAACAACACTGGC+TGG | 0.534256 | 1.4:+64734014 | MS.gene058774:CDS |
| CCCAAATAAAACATCACCAT+TGG | 0.534895 | 1.4:-64733703 | None:intergenic |
| GCGCAGTTACACGGAGGGTG+TGG | 0.537438 | 1.4:+64734263 | MS.gene058774:CDS |
| CGGTTCAGGTGTGGTTCACA+TGG | 0.537956 | 1.4:+64733746 | MS.gene058774:CDS |
| GAGGGAGACACACTCATGGC+CGG | 0.540366 | 1.4:-64734620 | None:intergenic |
| GCCTTTGGAGCACCCTCCAA+CGG | 0.540428 | 1.4:+64733441 | MS.gene058774:CDS |
| GCCAGCCCAACGCGAACCAA+TGG | 0.540771 | 1.4:+64733687 | MS.gene058774:CDS |
| ATAGGGCGGTTCGACCGGAC+AGG | 0.541559 | 1.4:+64733816 | MS.gene058774:CDS |
| GGCGGTTCGACCGGACAGGC+CGG | 0.542744 | 1.4:+64733820 | MS.gene058774:CDS |
| AACGTCATTGACGTGTGTAA+TGG | 0.544203 | 1.4:+64734092 | MS.gene058774:CDS |
| GGTTGGTACGGGTTCAACCC+CGG | 0.549923 | 1.4:+64733906 | MS.gene058774:CDS |
| CTGTAGTCACCCGAAGGTGA+AGG | 0.551464 | 1.4:-64733501 | None:intergenic |
| TATGATGGGTAGGATTGAGC+CGG | 0.553940 | 1.4:+64734601 | MS.gene058774:CDS |
| GTCCTCGACGCTGCAGCCGG+TGG | 0.554837 | 1.4:+64733387 | MS.gene058774:CDS |
| AGGACATAGCGCGTCGTTGG+TGG | 0.555347 | 1.4:+64733857 | MS.gene058774:CDS |
| TTCAGGTGTGGTTCACATGG+TGG | 0.556560 | 1.4:+64733749 | MS.gene058774:CDS |
| AATGGAGCCACTAGTGATAC+CGG | 0.557459 | 1.4:-64733562 | None:intergenic |
| GTGTGTAATGGTTTACTTGG+CGG | 0.557557 | 1.4:+64734104 | MS.gene058774:CDS |
| GCATAGGTAGTCTGCAACGG+CGG | 0.557659 | 1.4:-64733196 | None:intergenic |
| GGATGATGAGACTGCAGGGA+TGG | 0.557751 | 1.4:+64734502 | MS.gene058774:CDS |
| GTTTACGGGATTGTTTGCAA+AGG | 0.562175 | 1.4:+64734301 | MS.gene058774:CDS |
| AAATTGAGTTCTCTCTGCAA+TGG | 0.563390 | 1.4:-64733580 | None:intergenic |
| ACCGGCAGCAGCGATGGCGA+AGG | 0.564745 | 1.4:-64733544 | None:intergenic |
| ATAAGCTGAGAAGAGAAGGT+AGG | 0.565446 | 1.4:-64733277 | None:intergenic |
| TGAAATTGTTGAGGATATCG+AGG | 0.567161 | 1.4:+64734480 | MS.gene058774:CDS |
| GTGGCGGCCGATGAAGCCGT+TGG | 0.567324 | 1.4:-64733457 | None:intergenic |
| CCATATGGATTGTTGATGGG+TGG | 0.567763 | 1.4:+64734359 | MS.gene058774:CDS |
| TTATTCAGCCCATAAAATAA+CGG | 0.567889 | 1.4:-64734455 | None:intergenic |
| AACGGTTATTAGTTGGACAC+TGG | 0.568051 | 1.4:+64734069 | MS.gene058774:CDS |
| AGGCCATATGGATTGTTGAT+GGG | 0.568103 | 1.4:+64734356 | MS.gene058774:CDS |
| CAAACCCAATGCGAAACGAT+GGG | 0.569510 | 1.4:-64733648 | None:intergenic |
| GTCCTTTCAATGCAACAGAC+CGG | 0.570037 | 1.4:-64733839 | None:intergenic |
| TGGTGTTGAATTGGGTGCAT+AGG | 0.570282 | 1.4:-64733212 | None:intergenic |
| TTAGTCTTTGCCATGCAGCT+CGG | 0.570620 | 1.4:+64733300 | MS.gene058774:CDS |
| CATGGCGAAACCGAGCTGCA+TGG | 0.571462 | 1.4:-64733310 | None:intergenic |
| AGTGATACCGGCAGCAGCGA+TGG | 0.573055 | 1.4:-64733550 | None:intergenic |
| GGCTGCAGCGTCGAGGACAT+TGG | 0.575668 | 1.4:-64733382 | None:intergenic |
| TTGTTCTGTTGTGGAACCAT+GGG | 0.576456 | 1.4:+64734148 | MS.gene058774:CDS |
| CCAAACCCAATGCGAAACGA+TGG | 0.576636 | 1.4:-64733649 | None:intergenic |
| TGACTTTGCCGGTTCAGGTG+TGG | 0.579151 | 1.4:+64733737 | MS.gene058774:CDS |
| TTAGAGGCTGCGCAGTTACA+CGG | 0.582164 | 1.4:+64734254 | MS.gene058774:CDS |
| TGTAGTCACCCGAAGGTGAA+GGG | 0.585601 | 1.4:-64733500 | None:intergenic |
| CATGGGCCGCGATTGTGTGT+GGG | 0.586850 | 1.4:+64734165 | MS.gene058774:CDS |
| CGAGGGATGATGAGACTGCA+GGG | 0.589259 | 1.4:+64734498 | MS.gene058774:CDS |
| GTAGGTGTTGTCTATTGCAT+AGG | 0.590077 | 1.4:-64733259 | None:intergenic |
| TGAATAAGATGAAATTGTTG+AGG | 0.592343 | 1.4:+64734471 | MS.gene058774:CDS |
| AAATAACGGCACCATCGTGA+CGG | 0.592498 | 1.4:-64734441 | None:intergenic |
| AGGAAATTAGGGTTTATGAT+GGG | 0.592652 | 1.4:+64734587 | MS.gene058774:CDS |
| AACAAACCCACACACAATCG+CGG | 0.593035 | 1.4:-64734171 | None:intergenic |
| GGTGTTGTCTATTGCATAGG+TGG | 0.593690 | 1.4:-64733256 | None:intergenic |
| TTGCGTTTGCGGTGGTGGTG+AGG | 0.596669 | 1.4:-64733173 | None:intergenic |
| TGCGGTGGTGGTGAGGAGTG+GGG | 0.601876 | 1.4:-64733166 | None:intergenic |
| GGCAGAGGGAGACACACTCA+TGG | 0.604115 | 1.4:-64734624 | None:intergenic |
| GCTGCTGCCGGTATCACTAG+TGG | 0.604144 | 1.4:+64733555 | MS.gene058774:CDS |
| CCACACACAATCGCGGCCCA+TGG | 0.607906 | 1.4:-64734164 | None:intergenic |
| AGCCAAATAGATAGTAGGAG+AGG | 0.608112 | 1.4:-64733410 | None:intergenic |
| GGTGTGGTTCACATGGTGGG+TGG | 0.612109 | 1.4:+64733753 | MS.gene058774:CDS |
| ATGAGATTTATGGGATAGGG+AGG | 0.617665 | 1.4:+64734336 | MS.gene058774:CDS |
| TGTGTGGGTTTGTTGCGGCG+TGG | 0.623345 | 1.4:+64734180 | MS.gene058774:CDS |
| TGGACTTGACTAGACATGGT+GGG | 0.625359 | 1.4:+64734522 | MS.gene058774:CDS |
| GATTGTGTGTGGGTTTGTTG+CGG | 0.627273 | 1.4:+64734175 | MS.gene058774:CDS |
| GGTGCATAGGTAGTCTGCAA+CGG | 0.633576 | 1.4:-64733199 | None:intergenic |
| GAAATTGTTGAGGATATCGA+GGG | 0.633706 | 1.4:+64734481 | MS.gene058774:CDS |
| AACAGGTGTCACAACAACAC+TGG | 0.637368 | 1.4:+64734010 | MS.gene058774:CDS |
| CACCGACGTATCGTGTTCGG+TGG | 0.638372 | 1.4:-64734645 | None:intergenic |
| GTATCGTGTTCGGTGGCAGA+GGG | 0.638569 | 1.4:-64734638 | None:intergenic |
| AACGGCGGTTGCGTTTGCGG+TGG | 0.642746 | 1.4:-64733181 | None:intergenic |
| TGCTTATGCGTATCATGACG+AGG | 0.643185 | 1.4:+64734547 | MS.gene058774:CDS |
| GGCCACCGGCTGCAGCGTCG+AGG | 0.648352 | 1.4:-64733389 | None:intergenic |
| TAGATAGTAGGAGAGGCCAC+CGG | 0.654386 | 1.4:-64733403 | None:intergenic |
| ACATGGTGGGTGGTATAGCA+GGG | 0.662991 | 1.4:+64733763 | MS.gene058774:CDS |
| AAGTGATGATATCACACTGA+AGG | 0.666643 | 1.4:-64734680 | None:intergenic |
| AAGAAGCTGTAGTCACCCGA+AGG | 0.668205 | 1.4:-64733507 | None:intergenic |
| AGGCTGCGCAGTTACACGGA+GGG | 0.669758 | 1.4:+64734258 | MS.gene058774:CDS |
| ACCGGCAAAGTCAATAACAC+CGG | 0.670560 | 1.4:-64733727 | None:intergenic |
| AAACCCAATGCGAAACGATG+GGG | 0.679819 | 1.4:-64733647 | None:intergenic |
| TAGAAGGTCCTAGAATAGGG+CGG | 0.681945 | 1.4:+64733802 | MS.gene058774:CDS |
| TGGGTGGGTTACCGTCACGA+TGG | 0.684596 | 1.4:+64734430 | MS.gene058774:CDS |
| GGGATGGACTTGACTAGACA+TGG | 0.695287 | 1.4:+64734518 | MS.gene058774:CDS |
| ATGGACTTGACTAGACATGG+TGG | 0.698702 | 1.4:+64734521 | MS.gene058774:CDS |
| TGCCACCGAACACGATACGT+CGG | 0.704524 | 1.4:+64734643 | MS.gene058774:CDS |
| TTACGGGATTGTTTGCAAAG+GGG | 0.721445 | 1.4:+64734303 | MS.gene058774:CDS |
| GAGGCTGCGCAGTTACACGG+AGG | 0.735378 | 1.4:+64734257 | MS.gene058774:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTCTTCTTTTTTAAC+CGG | + | chr1.4:64733615-64733634 | MS.gene058774:CDS | 15.0% |
| !! | AAAAGAAGAATATATGAGAT+AGG | - | chr1.4:64733610-64733629 | None:intergenic | 20.0% |
| !! | AGTAACAAAAGGAATTATTA+TGG | + | chr1.4:64733966-64733985 | MS.gene058774:CDS | 20.0% |
| !! | TGCAATTATTAAAAATGAAC+CGG | - | chr1.4:64733928-64733947 | None:intergenic | 20.0% |
| !! | TTAATAATTGCAAAAAGCTA+TGG | + | chr1.4:64733936-64733955 | MS.gene058774:CDS | 20.0% |
| ! | AAAGGAATTATTATGGTCAA+TGG | + | chr1.4:64733973-64733992 | MS.gene058774:CDS | 25.0% |
| ! | ATGGAAATATGAGTAACAAA+AGG | + | chr1.4:64733955-64733974 | MS.gene058774:CDS | 25.0% |
| ! | CAATTATTAAAAATGAACCG+GGG | - | chr1.4:64733926-64733945 | None:intergenic | 25.0% |
| ! | GCAATTATTAAAAATGAACC+GGG | - | chr1.4:64733927-64733946 | None:intergenic | 25.0% |
| ! | TGAATAAGATGAAATTGTTG+AGG | + | chr1.4:64734471-64734490 | MS.gene058774:CDS | 25.0% |
| ! | TTATTCAGCCCATAAAATAA+CGG | - | chr1.4:64734458-64734477 | None:intergenic | 25.0% |
| ! | TTTAGTAAACGGTTATTAGT+TGG | + | chr1.4:64734062-64734081 | MS.gene058774:CDS | 25.0% |
| ! | TTTGATTGGGCTTAATAAAT+TGG | + | chr1.4:64734205-64734224 | MS.gene058774:CDS | 25.0% |
| !! | AGTATGTTGATGAGATTTAT+GGG | + | chr1.4:64734327-64734346 | MS.gene058774:CDS | 25.0% |
| !! | TGACAACTTTGTTTAGTAAA+CGG | + | chr1.4:64734051-64734070 | MS.gene058774:CDS | 25.0% |
| !!! | CTTTTTTATTATGGTTTGGT+TGG | + | chr1.4:64733889-64733908 | MS.gene058774:CDS | 25.0% |
| !!! | GGTTCTTTTTTATTATGGTT+TGG | + | chr1.4:64733885-64733904 | MS.gene058774:CDS | 25.0% |
| !!! | TGTTGGGTTCTTTTTTATTA+TGG | + | chr1.4:64733880-64733899 | MS.gene058774:CDS | 25.0% |
| ACGAGTCTATTAGGAAATTA+GGG | + | chr1.4:64734576-64734595 | MS.gene058774:CDS | 30.0% | |
| AGGAAATTAGGGTTTATGAT+GGG | + | chr1.4:64734587-64734606 | MS.gene058774:CDS | 30.0% | |
| GCTTAATAAATTGGCGATTA+AGG | + | chr1.4:64734214-64734233 | MS.gene058774:CDS | 30.0% | |
| TAGGAAATTAGGGTTTATGA+TGG | + | chr1.4:64734586-64734605 | MS.gene058774:CDS | 30.0% | |
| TTATAGAAGGTCCTAGAATA+GGG | + | chr1.4:64733799-64733818 | MS.gene058774:CDS | 30.0% | |
| TTGATGAGATTTATGGGATA+GGG | + | chr1.4:64734333-64734352 | MS.gene058774:CDS | 30.0% | |
| TTTATAGAAGGTCCTAGAAT+AGG | + | chr1.4:64733798-64733817 | MS.gene058774:CDS | 30.0% | |
| ! | ATTTGAGATGGTGTTGAATT+GGG | - | chr1.4:64733223-64733242 | None:intergenic | 30.0% |
| ! | GAGTATGTTGATGAGATTTA+TGG | + | chr1.4:64734326-64734345 | MS.gene058774:CDS | 30.0% |
| ! | TATTTGAGATGGTGTTGAAT+TGG | - | chr1.4:64733224-64733243 | None:intergenic | 30.0% |
| !! | ACCAATGGTGATGTTTTATT+TGG | + | chr1.4:64733702-64733721 | MS.gene058774:CDS | 30.0% |
| !! | TTATTATGGTTTGGTTGGTA+CGG | + | chr1.4:64733894-64733913 | MS.gene058774:CDS | 30.0% |
| !!! | CCAATGGTGATGTTTTATTT+GGG | + | chr1.4:64733703-64733722 | MS.gene058774:CDS | 30.0% |
| AAATTGAGTTCTCTCTGCAA+TGG | - | chr1.4:64733583-64733602 | None:intergenic | 35.0% | |
| AGCAAAGCCAAATAGATAGT+AGG | - | chr1.4:64733418-64733437 | None:intergenic | 35.0% | |
| CCCAAATAAAACATCACCAT+TGG | - | chr1.4:64733706-64733725 | None:intergenic | 35.0% | |
| CTAAATAAGCTGAGAAGAGA+AGG | - | chr1.4:64733284-64733303 | None:intergenic | 35.0% | |
| GAAATTGTTGAGGATATCGA+GGG | + | chr1.4:64734481-64734500 | MS.gene058774:CDS | 35.0% | |
| GAAGTATGATGATCCATTAG+AGG | + | chr1.4:64734238-64734257 | MS.gene058774:CDS | 35.0% | |
| GACGAGTCTATTAGGAAATT+AGG | + | chr1.4:64734575-64734594 | MS.gene058774:CDS | 35.0% | |
| TGAAATTGTTGAGGATATCG+AGG | + | chr1.4:64734480-64734499 | MS.gene058774:CDS | 35.0% | |
| TTTACGGGATTGTTTGCAAA+GGG | + | chr1.4:64734302-64734321 | MS.gene058774:CDS | 35.0% | |
| ! | CATGATGTTCATGGTGTTTT+TGG | - | chr1.4:64733358-64733377 | None:intergenic | 35.0% |
| ! | GTTGATGAGATTTATGGGAT+AGG | + | chr1.4:64734332-64734351 | MS.gene058774:CDS | 35.0% |
| !! | AATTAGGGTTTATGATGGGT+AGG | + | chr1.4:64734591-64734610 | MS.gene058774:CDS | 35.0% |
| !! | TATTATGGTTTGGTTGGTAC+GGG | + | chr1.4:64733895-64733914 | MS.gene058774:CDS | 35.0% |
| AACGATGGGGTAAACAAAAC+CGG | - | chr1.4:64733637-64733656 | None:intergenic | 40.0% | |
| AACGGTTATTAGTTGGACAC+TGG | + | chr1.4:64734069-64734088 | MS.gene058774:CDS | 40.0% | |
| AACGTCATTGACGTGTGTAA+TGG | + | chr1.4:64734092-64734111 | MS.gene058774:CDS | 40.0% | |
| AATCCCTTAGACCGAAAAAG+TGG | - | chr1.4:64733479-64733498 | None:intergenic | 40.0% | |
| ACAGCTTCTTTCTCTACCAA+TGG | + | chr1.4:64733520-64733539 | MS.gene058774:CDS | 40.0% | |
| AGCCAAATAGATAGTAGGAG+AGG | - | chr1.4:64733413-64733432 | None:intergenic | 40.0% | |
| AGGAAGATGACGAGTCTATT+AGG | + | chr1.4:64734567-64734586 | MS.gene058774:CDS | 40.0% | |
| ATAAGCTGAGAAGAGAAGGT+AGG | - | chr1.4:64733280-64733299 | None:intergenic | 40.0% | |
| ATGAGATTTATGGGATAGGG+AGG | + | chr1.4:64734336-64734355 | MS.gene058774:CDS | 40.0% | |
| ATTGGTGAGCATGATGTTCA+TGG | - | chr1.4:64733367-64733386 | None:intergenic | 40.0% | |
| CAGCTTCTTTCTCTACCAAT+GGG | + | chr1.4:64733521-64733540 | MS.gene058774:CDS | 40.0% | |
| GACGTGTGTAATGGTTTACT+TGG | + | chr1.4:64734101-64734120 | MS.gene058774:CDS | 40.0% | |
| GTCGCTGAGTTTATTTGAGA+TGG | - | chr1.4:64733235-64733254 | None:intergenic | 40.0% | |
| GTGTGTAATGGTTTACTTGG+CGG | + | chr1.4:64734104-64734123 | MS.gene058774:CDS | 40.0% | |
| GTTTACGGGATTGTTTGCAA+AGG | + | chr1.4:64734301-64734320 | MS.gene058774:CDS | 40.0% | |
| TGCAGAGAGAACTCAATTTG+TGG | + | chr1.4:64733584-64733603 | MS.gene058774:CDS | 40.0% | |
| TTACGGGATTGTTTGCAAAG+GGG | + | chr1.4:64734303-64734322 | MS.gene058774:CDS | 40.0% | |
| TTGTTCTGTTGTGGAACCAT+GGG | + | chr1.4:64734148-64734167 | MS.gene058774:CDS | 40.0% | |
| ! | AGGCCATATGGATTGTTGAT+GGG | + | chr1.4:64734356-64734375 | MS.gene058774:CDS | 40.0% |
| ! | GTAGGTGTTGTCTATTGCAT+AGG | - | chr1.4:64733262-64733281 | None:intergenic | 40.0% |
| ! | TATGGTCAATGGAGTGCTAT+TGG | + | chr1.4:64733984-64734003 | MS.gene058774:CDS | 40.0% |
| !! | TTATGGGGGGCATTTATAGA+AGG | + | chr1.4:64733786-64733805 | MS.gene058774:CDS | 40.0% |
| !! | TTGAGGTGCTGGTTATTTGT+GGG | + | chr1.4:64734411-64734430 | MS.gene058774:CDS | 40.0% |
| !!! | ACGATGGTGCCGTTATTTTA+TGG | + | chr1.4:64734446-64734465 | MS.gene058774:CDS | 40.0% |
| !!! | CGATGGTGCCGTTATTTTAT+GGG | + | chr1.4:64734447-64734466 | MS.gene058774:CDS | 40.0% |
| !!! | GGTGATGTTTTATTTGGGTC+CGG | + | chr1.4:64733708-64733727 | MS.gene058774:CDS | 40.0% |
| AAACCCAATGCGAAACGATG+GGG | - | chr1.4:64733650-64733669 | None:intergenic | 45.0% | |
| AAATAACGGCACCATCGTGA+CGG | - | chr1.4:64734444-64734463 | None:intergenic | 45.0% | |
| AACAAACCCACACACAATCG+CGG | - | chr1.4:64734174-64734193 | None:intergenic | 45.0% | |
| AACTGCAGGTTGTTCTGTTG+TGG | + | chr1.4:64734139-64734158 | MS.gene058774:CDS | 45.0% | |
| AAGGGATTACCCTTCACCTT+CGG | + | chr1.4:64733491-64733510 | MS.gene058774:CDS | 45.0% | |
| AATGGAGCCACTAGTGATAC+CGG | - | chr1.4:64733565-64733584 | None:intergenic | 45.0% | |
| ACCGGCAAAGTCAATAACAC+CGG | - | chr1.4:64733730-64733749 | None:intergenic | 45.0% | |
| ATGGACTTGACTAGACATGG+TGG | + | chr1.4:64734521-64734540 | MS.gene058774:CDS | 45.0% | |
| CAAACCCAATGCGAAACGAT+GGG | - | chr1.4:64733651-64733670 | None:intergenic | 45.0% | |
| CCACCCATCAACAATCCATA+TGG | - | chr1.4:64734362-64734381 | None:intergenic | 45.0% | |
| GGCCTCTCCTACTATCTATT+TGG | + | chr1.4:64733408-64733427 | MS.gene058774:CDS | 45.0% | |
| GTCCTTTCAATGCAACAGAC+CGG | - | chr1.4:64733842-64733861 | None:intergenic | 45.0% | |
| GTTGTTCTGTTGTGGAACCA+TGG | + | chr1.4:64734147-64734166 | MS.gene058774:CDS | 45.0% | |
| TACGGGATTGTTTGCAAAGG+GGG | + | chr1.4:64734304-64734323 | MS.gene058774:CDS | 45.0% | |
| TAGAAGGTCCTAGAATAGGG+CGG | + | chr1.4:64733802-64733821 | MS.gene058774:CDS | 45.0% | |
| TGCTTATGCGTATCATGACG+AGG | + | chr1.4:64734547-64734566 | MS.gene058774:CDS | 45.0% | |
| TGGACTTGACTAGACATGGT+GGG | + | chr1.4:64734522-64734541 | MS.gene058774:CDS | 45.0% | |
| TTACCCCATCGTTTCGCATT+GGG | + | chr1.4:64733644-64733663 | MS.gene058774:CDS | 45.0% | |
| TTTACCCCATCGTTTCGCAT+TGG | + | chr1.4:64733643-64733662 | MS.gene058774:CDS | 45.0% | |
| ! | AACAGGTGTCACAACAACAC+TGG | + | chr1.4:64734010-64734029 | MS.gene058774:CDS | 45.0% |
| ! | CCATATGGATTGTTGATGGG+TGG | + | chr1.4:64734359-64734378 | MS.gene058774:CDS | 45.0% |
| ! | GAGGCCATATGGATTGTTGA+TGG | + | chr1.4:64734355-64734374 | MS.gene058774:CDS | 45.0% |
| ! | GGTGTTGTCTATTGCATAGG+TGG | - | chr1.4:64733259-64733278 | None:intergenic | 45.0% |
| ! | GGTTTTGCTGCTATAACTGC+AGG | + | chr1.4:64734125-64734144 | MS.gene058774:CDS | 45.0% |
| ! | TATGGATTGTTGATGGGTGG+TGG | + | chr1.4:64734362-64734381 | MS.gene058774:CDS | 45.0% |
| ! | TGGAGTGCTATTGGAAGAAC+AGG | + | chr1.4:64733993-64734012 | MS.gene058774:CDS | 45.0% |
| ! | TGGTGTTGAATTGGGTGCAT+AGG | - | chr1.4:64733215-64733234 | None:intergenic | 45.0% |
| ! | TTAGTCTTTGCCATGCAGCT+CGG | + | chr1.4:64733300-64733319 | MS.gene058774:CDS | 45.0% |
| !! | GATTGTGTGTGGGTTTGTTG+CGG | + | chr1.4:64734175-64734194 | MS.gene058774:CDS | 45.0% |
| !! | GTTATTGACTTTGCCGGTTC+AGG | + | chr1.4:64733732-64733751 | MS.gene058774:CDS | 45.0% |
| !! | GTTGAGGTGCTGGTTATTTG+TGG | + | chr1.4:64734410-64734429 | MS.gene058774:CDS | 45.0% |
| !! | TATGATGGGTAGGATTGAGC+CGG | + | chr1.4:64734601-64734620 | MS.gene058774:CDS | 45.0% |
| !! | TCCGGTGTTATTGACTTTGC+CGG | + | chr1.4:64733726-64733745 | MS.gene058774:CDS | 45.0% |
| !! | TTTGGCTTTGCTTTCGCCTT+TGG | + | chr1.4:64733426-64733445 | MS.gene058774:CDS | 45.0% |
| !!! | CATGGTGTTTTTGGCTCGAA+CGG | - | chr1.4:64733349-64733368 | None:intergenic | 45.0% |
| AAGAAGCTGTAGTCACCCGA+AGG | - | chr1.4:64733510-64733529 | None:intergenic | 50.0% | |
| AGGGATTACCCTTCACCTTC+GGG | + | chr1.4:64733492-64733511 | MS.gene058774:CDS | 50.0% | |
| CATGTGAACCACACCTGAAC+CGG | - | chr1.4:64733748-64733767 | None:intergenic | 50.0% | |
| CCAAACCCAATGCGAAACGA+TGG | - | chr1.4:64733652-64733671 | None:intergenic | 50.0% | |
| CCATCGTTTCGCATTGGGTT+TGG | + | chr1.4:64733649-64733668 | MS.gene058774:CDS | 50.0% | |
| CCCTTAGACCGAAAAAGTGG+CGG | - | chr1.4:64733476-64733495 | None:intergenic | 50.0% | |
| GGGTGGTATAGCAGGGTTAT+GGG | + | chr1.4:64733770-64733789 | MS.gene058774:CDS | 50.0% | |
| GGTGCATAGGTAGTCTGCAA+CGG | - | chr1.4:64733202-64733221 | None:intergenic | 50.0% | |
| GGTGGTATAGCAGGGTTATG+GGG | + | chr1.4:64733771-64733790 | MS.gene058774:CDS | 50.0% | |
| GTGGTATAGCAGGGTTATGG+GGG | + | chr1.4:64733772-64733791 | MS.gene058774:CDS | 50.0% | |
| TAGATAGTAGGAGAGGCCAC+CGG | - | chr1.4:64733406-64733425 | None:intergenic | 50.0% | |
| TATGGGATAGGGAGGCCATA+TGG | + | chr1.4:64734344-64734363 | MS.gene058774:CDS | 50.0% | |
| TCAGGTGTGGTTCACATGGT+GGG | + | chr1.4:64733750-64733769 | MS.gene058774:CDS | 50.0% | |
| TGGGTGGTATAGCAGGGTTA+TGG | + | chr1.4:64733769-64733788 | MS.gene058774:CDS | 50.0% | |
| TGGTATAGCAGGGTTATGGG+GGG | + | chr1.4:64733773-64733792 | MS.gene058774:CDS | 50.0% | |
| TGTAACTGCGCAGCCTCTAA+TGG | - | chr1.4:64734254-64734273 | None:intergenic | 50.0% | |
| TGTAGTCACCCGAAGGTGAA+GGG | - | chr1.4:64733503-64733522 | None:intergenic | 50.0% | |
| TTAGAGGCTGCGCAGTTACA+CGG | + | chr1.4:64734254-64734273 | MS.gene058774:CDS | 50.0% | |
| TTCAGGTGTGGTTCACATGG+TGG | + | chr1.4:64733749-64733768 | MS.gene058774:CDS | 50.0% | |
| ! | CACACTGAAGGTGCACTGAT+TGG | - | chr1.4:64734671-64734690 | None:intergenic | 50.0% |
| ! | GGGATGGACTTGACTAGACA+TGG | + | chr1.4:64734518-64734537 | MS.gene058774:CDS | 50.0% |
| !! | ACATCACCATTGGTTCGCGT+TGG | - | chr1.4:64733696-64733715 | None:intergenic | 50.0% |
| !! | ACATGGTGGGTGGTATAGCA+GGG | + | chr1.4:64733763-64733782 | MS.gene058774:CDS | 50.0% |
| !! | AGGTGCTGGTTATTTGTGGG+TGG | + | chr1.4:64734414-64734433 | MS.gene058774:CDS | 50.0% |
| !! | CATCACCATTGGTTCGCGTT+GGG | - | chr1.4:64733695-64733714 | None:intergenic | 50.0% |
| !! | GATTGTTGATGGGTGGTGGA+GGG | + | chr1.4:64734366-64734385 | MS.gene058774:CDS | 50.0% |
| !! | GGTGCTGGTTATTTGTGGGT+GGG | + | chr1.4:64734415-64734434 | MS.gene058774:CDS | 50.0% |
| !!! | CCGCCACTTTTTCGGTCTAA+GGG | + | chr1.4:64733473-64733492 | MS.gene058774:CDS | 50.0% |
| !!! | TTCATCGGCCGCCACTTTTT+CGG | + | chr1.4:64733465-64733484 | MS.gene058774:CDS | 50.0% |
| !!! | TTGCGGCGTGGGTTTTGATT+GGG | + | chr1.4:64734192-64734211 | MS.gene058774:CDS | 50.0% |
| CGAGGGATGATGAGACTGCA+GGG | + | chr1.4:64734498-64734517 | MS.gene058774:CDS | 55.0% | |
| CGGTTCAGGTGTGGTTCACA+TGG | + | chr1.4:64733746-64733765 | MS.gene058774:CDS | 55.0% | |
| CTAGAATAGGGCGGTTCGAC+CGG | + | chr1.4:64733811-64733830 | MS.gene058774:CDS | 55.0% | |
| CTGTAGTCACCCGAAGGTGA+AGG | - | chr1.4:64733504-64733523 | None:intergenic | 55.0% | |
| GAAAGGACATAGCGCGTCGT+TGG | + | chr1.4:64733854-64733873 | MS.gene058774:CDS | 55.0% | |
| GCATAGGTAGTCTGCAACGG+CGG | - | chr1.4:64733199-64733218 | None:intergenic | 55.0% | |
| GGATGATGAGACTGCAGGGA+TGG | + | chr1.4:64734502-64734521 | MS.gene058774:CDS | 55.0% | |
| GGCCGGTCTGTTGCATTGAA+AGG | + | chr1.4:64733837-64733856 | MS.gene058774:CDS | 55.0% | |
| TCGAGGGATGATGAGACTGC+AGG | + | chr1.4:64734497-64734516 | MS.gene058774:CDS | 55.0% | |
| TGCCACCGAACACGATACGT+CGG | + | chr1.4:64734643-64734662 | MS.gene058774:CDS | 55.0% | |
| TGGTGGAGGGAGGTTGTTTG+CGG | + | chr1.4:64734379-64734398 | MS.gene058774:CDS | 55.0% | |
| ! | CATTGGGTTTGGTCTGCCGA+TGG | + | chr1.4:64733660-64733679 | MS.gene058774:CDS | 55.0% |
| ! | GGATTGTTGATGGGTGGTGG+AGG | + | chr1.4:64734365-64734384 | MS.gene058774:CDS | 55.0% |
| ! | GGTGTCACAACAACACTGGC+TGG | + | chr1.4:64734014-64734033 | MS.gene058774:CDS | 55.0% |
| ! | GGTTTGGTCTGCCGATGGTT+GGG | + | chr1.4:64733665-64733684 | MS.gene058774:CDS | 55.0% |
| ! | GTATCGTGTTCGGTGGCAGA+GGG | - | chr1.4:64734641-64734660 | None:intergenic | 55.0% |
| !! | CACATGGTGGGTGGTATAGC+AGG | + | chr1.4:64733762-64733781 | MS.gene058774:CDS | 55.0% |
| !! | CGCATGGGGGGTGTTGTTTA+CGG | + | chr1.4:64734286-64734305 | MS.gene058774:CDS | 55.0% |
| !! | GCATGGGGGGTGTTGTTTAC+GGG | + | chr1.4:64734287-64734306 | MS.gene058774:CDS | 55.0% |
| !! | GTTGCGGCGTGGGTTTTGAT+TGG | + | chr1.4:64734191-64734210 | MS.gene058774:CDS | 55.0% |
| !! | TGACTTTGCCGGTTCAGGTG+TGG | + | chr1.4:64733737-64733756 | MS.gene058774:CDS | 55.0% |
| !! | TGGCACCGACGTATCGTGTT+CGG | - | chr1.4:64734651-64734670 | None:intergenic | 55.0% |
| !!! | GCCGCCACTTTTTCGGTCTA+AGG | + | chr1.4:64733472-64733491 | MS.gene058774:CDS | 55.0% |
| AATGTCCTCGACGCTGCAGC+CGG | + | chr1.4:64733384-64733403 | MS.gene058774:CDS | 60.0% | |
| AGGACATAGCGCGTCGTTGG+TGG | + | chr1.4:64733857-64733876 | MS.gene058774:CDS | 60.0% | |
| AGGCTGCGCAGTTACACGGA+GGG | + | chr1.4:64734258-64734277 | MS.gene058774:CDS | 60.0% | |
| AGTGATACCGGCAGCAGCGA+TGG | - | chr1.4:64733553-64733572 | None:intergenic | 60.0% | |
| ATGCAACAGACCGGCCTGTC+CGG | - | chr1.4:64733833-64733852 | None:intergenic | 60.0% | |
| CACCGACGTATCGTGTTCGG+TGG | - | chr1.4:64734648-64734667 | None:intergenic | 60.0% | |
| CATGGCGAAACCGAGCTGCA+TGG | - | chr1.4:64733313-64733332 | None:intergenic | 60.0% | |
| CATGGGCCGCGATTGTGTGT+GGG | + | chr1.4:64734165-64734184 | MS.gene058774:CDS | 60.0% | |
| CGGTCGAACCGCCCTATTCT+AGG | - | chr1.4:64733813-64733832 | None:intergenic | 60.0% | |
| GAGGGAGACACACTCATGGC+CGG | - | chr1.4:64734623-64734642 | None:intergenic | 60.0% | |
| GCACCCTCCAACGGCTTCAT+CGG | + | chr1.4:64733450-64733469 | MS.gene058774:CDS | 60.0% | |
| GCTGCTGCCGGTATCACTAG+TGG | + | chr1.4:64733555-64733574 | MS.gene058774:CDS | 60.0% | |
| GGCAGAGGGAGACACACTCA+TGG | - | chr1.4:64734627-64734646 | None:intergenic | 60.0% | |
| TGCAACGGCGGTTGCGTTTG+CGG | - | chr1.4:64733187-64733206 | None:intergenic | 60.0% | |
| ! | CGTATCGTGTTCGGTGGCAG+AGG | - | chr1.4:64734642-64734661 | None:intergenic | 60.0% |
| ! | GGGTTTGGTCTGCCGATGGT+TGG | + | chr1.4:64733664-64733683 | MS.gene058774:CDS | 60.0% |
| ! | GGTGTGGTTCACATGGTGGG+TGG | + | chr1.4:64733753-64733772 | MS.gene058774:CDS | 60.0% |
| ! | GGTTGGTACGGGTTCAACCC+CGG | + | chr1.4:64733906-64733925 | MS.gene058774:CDS | 60.0% |
| ! | TTGCGGTGGTGGTGAGGAGT+GGG | - | chr1.4:64733170-64733189 | None:intergenic | 60.0% |
| ! | TTGCGTTTGCGGTGGTGGTG+AGG | - | chr1.4:64733176-64733195 | None:intergenic | 60.0% |
| ! | TTTGCGGTGGTGGTGAGGAG+TGG | - | chr1.4:64733171-64733190 | None:intergenic | 60.0% |
| !! | ACCATTGGTTCGCGTTGGGC+TGG | - | chr1.4:64733691-64733710 | None:intergenic | 60.0% |
| !! | AGCGCGTCGTTGGTGGTGTT+GGG | + | chr1.4:64733864-64733883 | MS.gene058774:CDS | 60.0% |
| !! | GCCTTTGGAGCACCCTCCAA+CGG | + | chr1.4:64733441-64733460 | MS.gene058774:CDS | 60.0% |
| !! | GTGTGGGTTTGTTGCGGCGT+GGG | + | chr1.4:64734181-64734200 | MS.gene058774:CDS | 60.0% |
| !! | TAGCGCGTCGTTGGTGGTGT+TGG | + | chr1.4:64733863-64733882 | MS.gene058774:CDS | 60.0% |
| !! | TGGGTGGGTTACCGTCACGA+TGG | + | chr1.4:64734430-64734449 | MS.gene058774:CDS | 60.0% |
| !! | TGTGTGGGTTTGTTGCGGCG+TGG | + | chr1.4:64734180-64734199 | MS.gene058774:CDS | 60.0% |
| !! | TGTTGATGGGTGGTGGAGGG+AGG | + | chr1.4:64734369-64734388 | MS.gene058774:CDS | 60.0% |
| AACGGAGCCTGCGCAGAGCA+TGG | - | chr1.4:64733331-64733350 | None:intergenic | 65.0% | |
| AACGGCGGTTGCGTTTGCGG+TGG | - | chr1.4:64733184-64733203 | None:intergenic | 65.0% | |
| AGGGAGGTTGTTTGCGGCGC+AGG | + | chr1.4:64734385-64734404 | MS.gene058774:CDS | 65.0% | |
| ATAGGGCGGTTCGACCGGAC+AGG | + | chr1.4:64733816-64733835 | MS.gene058774:CDS | 65.0% | |
| CAGCGATGGCGAAGGCCCAT+TGG | - | chr1.4:64733539-64733558 | None:intergenic | 65.0% | |
| CCACACACAATCGCGGCCCA+TGG | - | chr1.4:64734167-64734186 | None:intergenic | 65.0% | |
| CCATGGGCCGCGATTGTGTG+TGG | + | chr1.4:64734164-64734183 | MS.gene058774:CDS | 65.0% | |
| CGGCCGATGAAGCCGTTGGA+GGG | - | chr1.4:64733456-64733475 | None:intergenic | 65.0% | |
| GAGGAGTGGGGCTAGGTCTG+TGG | - | chr1.4:64733157-64733176 | None:intergenic | 65.0% | |
| GAGGCTGCGCAGTTACACGG+AGG | + | chr1.4:64734257-64734276 | MS.gene058774:CDS | 65.0% | |
| GAGGTTGTTTGCGGCGCAGG+TGG | + | chr1.4:64734388-64734407 | MS.gene058774:CDS | 65.0% | |
| GCCAGCCCAACGCGAACCAA+TGG | + | chr1.4:64733687-64733706 | MS.gene058774:CDS | 65.0% | |
| GCGCAGTTACACGGAGGGTG+TGG | + | chr1.4:64734263-64734282 | MS.gene058774:CDS | 65.0% | |
| GGTTTCGCCATGCTCTGCGC+AGG | + | chr1.4:64733321-64733340 | MS.gene058774:CDS | 65.0% | |
| GTTTGCGGCGCAGGTGGTTG+AGG | + | chr1.4:64734394-64734413 | MS.gene058774:CDS | 65.0% | |
| ! | ACACGGAGGGTGTGGCGCAT+GGG | + | chr1.4:64734271-64734290 | MS.gene058774:CDS | 65.0% |
| ! | GGCTGCAGCGTCGAGGACAT+TGG | - | chr1.4:64733385-64733404 | None:intergenic | 65.0% |
| ! | TACACGGAGGGTGTGGCGCA+TGG | + | chr1.4:64734270-64734289 | MS.gene058774:CDS | 65.0% |
| ! | TGCGGTGGTGGTGAGGAGTG+GGG | - | chr1.4:64733169-64733188 | None:intergenic | 65.0% |
| ! | TGGTGGTGAGGAGTGGGGCT+AGG | - | chr1.4:64733164-64733183 | None:intergenic | 65.0% |
| !! | CGTTGGGCTGGCCCAACCAT+CGG | - | chr1.4:64733679-64733698 | None:intergenic | 65.0% |
| !! | GCCGTTGGAGGGTGCTCCAA+AGG | - | chr1.4:64733445-64733464 | None:intergenic | 65.0% |
| ACCGGCAGCAGCGATGGCGA+AGG | - | chr1.4:64733547-64733566 | None:intergenic | 70.0% | |
| GCCTTCGCCATCGCTGCTGC+CGG | + | chr1.4:64733543-64733562 | MS.gene058774:CDS | 70.0% | |
| GCGGCCGATGAAGCCGTTGG+AGG | - | chr1.4:64733457-64733476 | None:intergenic | 70.0% | |
| GGCGCAGGTGGTTGAGGTGC+TGG | + | chr1.4:64734400-64734419 | MS.gene058774:CDS | 70.0% | |
| GGCGGTTGCGTTTGCGGTGG+TGG | - | chr1.4:64733181-64733200 | None:intergenic | 70.0% | |
| GTGGCGGCCGATGAAGCCGT+TGG | - | chr1.4:64733460-64733479 | None:intergenic | 70.0% | |
| ! | ACGGAGGGTGTGGCGCATGG+GGG | + | chr1.4:64734273-64734292 | MS.gene058774:CDS | 70.0% |
| ! | CACGGAGGGTGTGGCGCATG+GGG | + | chr1.4:64734272-64734291 | MS.gene058774:CDS | 70.0% |
| GGCGGTTCGACCGGACAGGC+CGG | + | chr1.4:64733820-64733839 | MS.gene058774:CDS | 75.0% | |
| GTCCTCGACGCTGCAGCCGG+TGG | + | chr1.4:64733387-64733406 | MS.gene058774:CDS | 75.0% | |
| ! | CGGAGGGTGTGGCGCATGGG+GGG | + | chr1.4:64734274-64734293 | MS.gene058774:CDS | 75.0% |
| !! | GGCCACCGGCTGCAGCGTCG+AGG | - | chr1.4:64733392-64733411 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 64733132 | 64734691 | 64733132 | ID=MS.gene058774 |
| chr1.4 | mRNA | 64733132 | 64734691 | 64733132 | ID=MS.gene058774.t1;Parent=MS.gene058774 |
| chr1.4 | exon | 64733132 | 64734691 | 64733132 | ID=MS.gene058774.t1.exon1;Parent=MS.gene058774.t1 |
| chr1.4 | CDS | 64733132 | 64734691 | 64733132 | ID=cds.MS.gene058774.t1;Parent=MS.gene058774.t1 |
| Gene Sequence |
| Protein sequence |
