AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74897

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74897.t1 MTR_1g079760 97.688 519 12 0 1 519 1 519 0.0 1028
MS.gene74897.t1 MTR_1g045550 73.281 509 124 5 1 506 1 500 0.0 744
MS.gene74897.t1 MTR_7g098930 72.912 491 127 3 1 489 1 487 0.0 723
MS.gene74897.t1 MTR_7g113340 72.245 490 128 4 1 487 1 485 0.0 712
MS.gene74897.t1 MTR_3g463730 67.188 448 136 4 41 484 8 448 0.0 597
MS.gene74897.t1 MTR_7g115050 28.866 388 216 15 112 479 100 447 3.18e-25 108
MS.gene74897.t1 MTR_1g036410 25.641 468 277 17 47 484 24 450 5.47e-21 96.3
MS.gene74897.t1 MTR_8g074750 25.591 465 280 15 47 486 30 453 2.77e-20 94.0
MS.gene74897.t1 MTR_7g069640 26.263 495 294 13 47 507 22 479 4.54e-17 84.3
MS.gene74897.t1 MTR_4g017820 27.789 493 289 17 47 507 22 479 5.00e-16 80.9
MS.gene74897.t1 MTR_8g095040 24.947 473 290 12 47 487 29 468 1.18e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74897.t1 AT1G64780 76.641 518 104 6 2 513 4 510 0.0 786
MS.gene74897.t1 AT4G13510 74.319 514 116 7 4 514 1 501 0.0 764
MS.gene74897.t1 AT3G24300 73.320 506 118 4 3 506 4 494 0.0 746
MS.gene74897.t1 AT3G24290 75.155 483 111 4 3 483 4 479 0.0 727
MS.gene74897.t1 AT4G28700 73.737 495 121 5 2 489 3 495 0.0 707
MS.gene74897.t1 AT2G38290 26.078 464 288 13 47 488 20 450 7.94e-22 99.0
MS.gene74897.t1 AT2G38290 26.870 361 224 10 135 488 7 334 2.42e-19 90.1

Find 198 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTATGTTGATGAGATTTA+TGG 0.166530 1.1:-59242252 MS.gene74897:CDS
GACGAGTCTATTAGGAAATT+AGG 0.214176 1.1:-59242003 MS.gene74897:CDS
TTTGATTGGGCTTAATAAAT+TGG 0.218891 1.1:-59242373 MS.gene74897:CDS
GCTTAATAAATTGGCGATTA+AGG 0.220724 1.1:-59242364 MS.gene74897:CDS
TAGGAAATTAGGGTTTATTA+TGG 0.238047 1.1:-59241992 MS.gene74897:CDS
TTCGGCTTCGCTTTCGCCTT+TGG 0.287554 1.1:-59243152 MS.gene74897:CDS
CGGTCGAATCGCCCTATTCT+AGG 0.293247 1.1:+59242768 None:intergenic
GTTATTGACTTTGCCGGTTC+AGG 0.294088 1.1:-59242846 MS.gene74897:CDS
GGGTGGTATAGCAGGGTTAT+GGG 0.312935 1.1:-59242808 MS.gene74897:CDS
TCCGGTGTTATTGACTTTGC+CGG 0.323221 1.1:-59242852 MS.gene74897:CDS
TATGGTCAATGGAGTGCTAT+TGG 0.333213 1.1:-59242594 MS.gene74897:CDS
GTTGAGGTGTTGGTTATTTG+TGG 0.337506 1.1:-59242168 MS.gene74897:CDS
AGGGAGGTTGTTTGCGGCGC+AGG 0.338172 1.1:-59242193 MS.gene74897:CDS
CACATGGTGGGTGGTATAGC+AGG 0.340009 1.1:-59242816 MS.gene74897:CDS
CACGGAGGGTGCGGTGCATG+GGG 0.340968 1.1:-59242306 MS.gene74897:CDS
AGGAAGATGACGAGTCTATT+AGG 0.343254 1.1:-59242011 MS.gene74897:CDS
ATATATTCTTCTTTCTTAAC+CGG 0.346432 1.1:-59242963 MS.gene74897:CDS
ACGAGTCTATTAGGAAATTA+GGG 0.347347 1.1:-59242002 MS.gene74897:CDS
TGTAACTGCGCAGCCTCTAA+TGG 0.347657 1.1:+59242327 None:intergenic
TACACGGAGGGTGCGGTGCA+TGG 0.352401 1.1:-59242308 MS.gene74897:CDS
CCATCGTTTCGCATTGGGTT+TGG 0.355981 1.1:-59242929 MS.gene74897:CDS
ACACGGAGGGTGCGGTGCAT+GGG 0.356133 1.1:-59242307 MS.gene74897:CDS
AGGGATTACCCTTCACCTTC+CGG 0.361786 1.1:-59243086 MS.gene74897:CDS
TAGCGCGTCGTTGGTGGTGT+TGG 0.373610 1.1:-59242715 MS.gene74897:CDS
GGATTGTTGATGGGTGGTGG+AGG 0.374838 1.1:-59242213 MS.gene74897:CDS
ATTTGAGATGGTGTTGAATT+GGG 0.384973 1.1:+59243358 None:intergenic
AGTATGTTGATGAGATTTAT+GGG 0.385179 1.1:-59242251 MS.gene74897:CDS
TTACCCCATCGTTTCGCATT+GGG 0.385239 1.1:-59242934 MS.gene74897:CDS
TAACAACTTTGTTTAGTAAA+CGG 0.393569 1.1:-59242527 MS.gene74897:CDS
TTTATAGAAGGTCCTAGAAT+AGG 0.393823 1.1:-59242780 MS.gene74897:CDS
TTTAGTAAACGGTTATTAGT+TGG 0.394285 1.1:-59242516 MS.gene74897:CDS
ATATGAGATATGCCACGAAT+TGG 0.394904 1.1:+59242982 None:intergenic
TATTTGAGATGGTGTTGAAT+TGG 0.400022 1.1:+59243357 None:intergenic
GGTTTGGTCTGCCGATGGTT+GGG 0.403385 1.1:-59242913 MS.gene74897:CDS
GACGTGTGTAACGGTTTACT+TGG 0.403746 1.1:-59242477 MS.gene74897:CDS
TTGAGGTGTTGGTTATTTGT+GGG 0.404299 1.1:-59242167 MS.gene74897:CDS
TGGGTGGTATAGCAGGGTTA+TGG 0.404483 1.1:-59242809 MS.gene74897:CDS
AGTAACAAAAGGAATTATTA+TGG 0.405005 1.1:-59242612 MS.gene74897:CDS
CGGAGGGTGCGGTGCATGGG+GGG 0.405574 1.1:-59242304 MS.gene74897:CDS
TTGCAGTGGTGGTGAGGAGT+GGG 0.407639 1.1:+59243411 None:intergenic
CATGTGAACCACACCTGAAC+CGG 0.411513 1.1:+59242833 None:intergenic
TATTATGGTTTGGTTGGTAC+GGG 0.415535 1.1:-59242683 MS.gene74897:CDS
AGGAAATTAGGGTTTATTAT+GGG 0.422494 1.1:-59241991 MS.gene74897:CDS
TTATTATGGTTTGGTTGGTA+CGG 0.423451 1.1:-59242684 MS.gene74897:CDS
AGGTGTTGGTTATTTGTGGG+TGG 0.427283 1.1:-59242164 MS.gene74897:CDS
CATCACCATCGGTTCGCGTT+GGG 0.427874 1.1:+59242886 None:intergenic
GTGGTATAGCAGGGTTATGG+GGG 0.427928 1.1:-59242806 MS.gene74897:CDS
ATGCAACAGACCGGCCTGTC+CGG 0.429149 1.1:+59242748 None:intergenic
AGCGCGTCGTTGGTGGTGTT+GGG 0.430363 1.1:-59242714 MS.gene74897:CDS
ACCATCGGTTCGCGTTGGGC+TGG 0.431435 1.1:+59242890 None:intergenic
ATAAGCTGAGAAGAGAAGAT+AGG 0.432230 1.1:+59243301 None:intergenic
GTCAGTGAGTTTATTTGAGA+TGG 0.433333 1.1:+59243346 None:intergenic
GGTGTTGGTTATTTGTGGGT+GGG 0.433759 1.1:-59242163 MS.gene74897:CDS
ACGGAGGGTGCGGTGCATGG+GGG 0.434614 1.1:-59242305 MS.gene74897:CDS
AAAGGAATTATTATGGTCAA+TGG 0.435762 1.1:-59242605 MS.gene74897:CDS
TGTTGATGGGTGGTGGAGGG+AGG 0.437827 1.1:-59242209 MS.gene74897:CDS
CAGCGATGGCGAAGGCCCAT+TGG 0.442094 1.1:+59243042 None:intergenic
GAGGCCGTATGGATTGTTGA+TGG 0.443279 1.1:-59242223 MS.gene74897:CDS
GGCCTCTCCTACTATCTCTT+CGG 0.447262 1.1:-59243170 MS.gene74897:CDS
GGCGCAGGTGGTTGAGGTGT+TGG 0.450580 1.1:-59242178 MS.gene74897:CDS
CACACTGAAGGTGCACTGAT+TGG 0.453333 1.1:+59241910 None:intergenic
TTTACCCCATCGTTTCGCAT+TGG 0.453403 1.1:-59242935 MS.gene74897:CDS
GGTGGTATAGCAGGGTTATG+GGG 0.457348 1.1:-59242807 MS.gene74897:CDS
TATGAGATATGCCACGAATT+GGG 0.458451 1.1:+59242983 None:intergenic
TTATAGAAGGTCCTAGAATA+GGG 0.458590 1.1:-59242779 MS.gene74897:CDS
GCCTTCGCCATCGCTGCTGC+CGG 0.459814 1.1:-59243035 MS.gene74897:CDS
TGGTGGTGAGGAGTGGGGCG+AGG 0.461907 1.1:+59243417 None:intergenic
GATTGTTGATGGGTGGTGGA+GGG 0.464090 1.1:-59242212 MS.gene74897:CDS
GGGTTTGGTCTGCCGATGGT+TGG 0.467295 1.1:-59242914 MS.gene74897:CDS
GTTTGCGGCGCAGGTGGTTG+AGG 0.472995 1.1:-59242184 MS.gene74897:CDS
CTAGAATAGGGCGATTCGAC+CGG 0.474874 1.1:-59242767 MS.gene74897:CDS
TGGTGGAGGGAGGTTGTTTG+CGG 0.475634 1.1:-59242199 MS.gene74897:CDS
GTGTGGGTTTGTTGCGGCGT+GGG 0.479169 1.1:-59242397 MS.gene74897:CDS
GTTGTTCTGTTGTGGAACCA+TGG 0.481083 1.1:-59242431 MS.gene74897:CDS
GGCGGTAGCGTTTGCAGTGG+TGG 0.482310 1.1:+59243400 None:intergenic
GTTGATGAGATTTATGGGTC+CGG 0.482350 1.1:-59242246 MS.gene74897:CDS
GAGGAGTGGGGCGAGGTCTG+TGG 0.484837 1.1:+59243424 None:intergenic
GGTTTCGCCATGCTCTGTGC+CGG 0.485990 1.1:-59243257 MS.gene74897:CDS
AACGATGGGGTAAACAAAAC+CGG 0.487884 1.1:+59242944 None:intergenic
CGTTGGGCTGGCCCAACCAT+CGG 0.489504 1.1:+59242902 None:intergenic
TATGGGTCCGGGAGGCCGTA+TGG 0.489869 1.1:-59242234 MS.gene74897:CDS
TTTACGGGATTGTTTGCAAA+GGG 0.491383 1.1:-59242276 MS.gene74897:CDS
GAAGTATGATGATCCATTAG+AGG 0.491623 1.1:-59242340 MS.gene74897:CDS
TCTCTCTGCAATGGAGCCAC+TGG 0.496625 1.1:+59243007 None:intergenic
TCAGGTGTGGTTCACATGGT+GGG 0.496702 1.1:-59242828 MS.gene74897:CDS
ACAGCTTCTTTCTCTACCAA+TGG 0.497981 1.1:-59243058 MS.gene74897:CDS
TGTATCGTGTCCGGTGGCAG+AGG 0.501134 1.1:+59241939 None:intergenic
CCATGGGCCGCGATTGTGTG+TGG 0.504024 1.1:-59242414 MS.gene74897:CDS
TTGATGAGATTTATGGGTCC+GGG 0.505912 1.1:-59242245 MS.gene74897:CDS
ATTGGTGAGCATGATGTTCA+TGG 0.505916 1.1:+59243214 None:intergenic
CATTGGGTTTGGTCTGCCGA+TGG 0.506434 1.1:-59242918 MS.gene74897:CDS
AGTGTCACAACGACATTGGC+TGG 0.508487 1.1:-59242564 MS.gene74897:CDS
TATGGATTGTTGATGGGTGG+TGG 0.508513 1.1:-59242216 MS.gene74897:CDS
GAGGTTGTTTGCGGCGCAGG+TGG 0.508529 1.1:-59242190 MS.gene74897:CDS
GAAAGGACATAGCGCGTCGT+TGG 0.508596 1.1:-59242724 MS.gene74897:CDS
TCGAGGGATGATGAGACTGC+AGG 0.509046 1.1:-59242081 MS.gene74897:CDS
TGCAGAGAGAACCCAATTCG+TGG 0.511335 1.1:-59242994 MS.gene74897:CDS
TACGGGATTGTTTGCAAAGG+GGG 0.512801 1.1:-59242274 MS.gene74897:CDS
GTGTGTAACGGTTTACTTGG+CGG 0.514764 1.1:-59242474 MS.gene74897:CDS
CAGCTTCTTTCTCTACCAAT+GGG 0.516999 1.1:-59243057 MS.gene74897:CDS
AACTGCAGGTTGTTCTGTTG+TGG 0.517299 1.1:-59242439 MS.gene74897:CDS
ATGGAAATATGAGTAACAAA+AGG 0.518100 1.1:-59242623 MS.gene74897:CDS
GGCCGGTCTGTTGCATTGAA+AGG 0.519192 1.1:-59242741 MS.gene74897:CDS
GAGAAAGAAGCTGTAGTCAC+CGG 0.520220 1.1:+59243067 None:intergenic
AATGGAGCCACTGGTGATAC+CGG 0.521341 1.1:+59243016 None:intergenic
GCCTTTGGAGCACCCTCCAA+TGG 0.524193 1.1:-59243137 MS.gene74897:CDS
TTTGCAGTGGTGGTGAGGAG+TGG 0.524547 1.1:+59243410 None:intergenic
GCACCCTCCAATGGTTTCAT+CGG 0.528576 1.1:-59243128 MS.gene74897:CDS
AATGTCCTCGACGCTGCAGC+CGG 0.530902 1.1:-59243194 MS.gene74897:CDS
TGGTATAGCAGGGTTATGGG+GGG 0.532932 1.1:-59242805 MS.gene74897:CDS
GCGCAGTTACACGGAGGGTG+CGG 0.534032 1.1:-59242315 MS.gene74897:CDS
CGGTTCAGGTGTGGTTCACA+TGG 0.537956 1.1:-59242832 MS.gene74897:CDS
ACCATTGGAGGGTGCTCCAA+AGG 0.539068 1.1:+59243136 None:intergenic
AACAGAGCCGGCACAGAGCA+TGG 0.539811 1.1:+59243250 None:intergenic
AGGCCGTATGGATTGTTGAT+GGG 0.540097 1.1:-59242222 MS.gene74897:CDS
CTGTAGTCACCGGAAGGTGA+AGG 0.546826 1.1:+59243077 None:intergenic
CAACAATCCATACGGCCTCC+CGG 0.547364 1.1:+59242227 None:intergenic
ACATCACCATCGGTTCGCGT+TGG 0.547798 1.1:+59242885 None:intergenic
GGTTGGTACGGGTTCAACCC+CGG 0.549923 1.1:-59242672 MS.gene74897:CDS
ATAGGGCGATTCGACCGGAC+AGG 0.550537 1.1:-59242762 MS.gene74897:CDS
TTAGTCTTCGCCATGCAGCT+TGG 0.551508 1.1:-59243278 MS.gene74897:CDS
GAGGGAGACACACTCGTGGC+CGG 0.551918 1.1:+59241958 None:intergenic
GGCGATTCGACCGGACAGGC+CGG 0.554425 1.1:-59242758 MS.gene74897:CDS
GTCCTCGACGCTGCAGCCGG+TGG 0.554837 1.1:-59243191 MS.gene74897:CDS
AGGACATAGCGCGTCGTTGG+TGG 0.555347 1.1:-59242721 MS.gene74897:CDS
AGTGTGTCTCCCTCTGCCAC+CGG 0.555628 1.1:-59241949 MS.gene74897:CDS
TGGCACCGGTGTATCGTGTC+CGG 0.556207 1.1:+59241930 None:intergenic
TTCAGGTGTGGTTCACATGG+TGG 0.556560 1.1:-59242829 MS.gene74897:CDS
GCCAGCCCAACGCGAACCGA+TGG 0.556829 1.1:-59242891 MS.gene74897:CDS
GGATGATGAGACTGCAGGGA+TGG 0.557751 1.1:-59242076 MS.gene74897:CDS
GGTGATACCGGCAGCAGCGA+TGG 0.559774 1.1:+59243028 None:intergenic
GTTTACGGGATTGTTTGCAA+AGG 0.562175 1.1:-59242277 MS.gene74897:CDS
AGCGAAGCCGAAGAGATAGT+AGG 0.563480 1.1:+59243163 None:intergenic
ACCGGCAGCAGCGATGGCGA+AGG 0.564745 1.1:+59243034 None:intergenic
TGAAATTGTTGAGGATATCG+AGG 0.567161 1.1:-59242098 MS.gene74897:CDS
TATTATGGGTAGGATTGAGC+CGG 0.567782 1.1:-59241977 MS.gene74897:CDS
TTATTCAGCCCATAAAATAA+CGG 0.567889 1.1:+59242123 None:intergenic
AACGGTTATTAGTTGGACAC+TGG 0.568051 1.1:-59242509 MS.gene74897:CDS
CAAACCCAATGCGAAACGAT+GGG 0.569510 1.1:+59242930 None:intergenic
GTCCTTTCAATGCAACAGAC+CGG 0.570037 1.1:+59242739 None:intergenic
TGGTGTTGAATTGGGTGCAT+AGG 0.570282 1.1:+59243366 None:intergenic
CATGGCGAAACCAAGCTGCA+TGG 0.574623 1.1:+59243268 None:intergenic
GAATTGGGTTCTCTCTGCAA+TGG 0.575318 1.1:+59242998 None:intergenic
GGCTGCAGCGTCGAGGACAT+TGG 0.575668 1.1:+59243196 None:intergenic
TTGTTCTGTTGTGGAACCAT+GGG 0.576456 1.1:-59242430 MS.gene74897:CDS
CCAAACCCAATGCGAAACGA+TGG 0.576636 1.1:+59242929 None:intergenic
GTATCGTGTCCGGTGGCAGA+GGG 0.577389 1.1:+59241940 None:intergenic
TGACTTTGCCGGTTCAGGTG+TGG 0.579151 1.1:-59242841 MS.gene74897:CDS
TAGCGTTTGCAGTGGTGGTG+AGG 0.579196 1.1:+59243405 None:intergenic
GTGGCGGCCGATGAAACCAT+TGG 0.579590 1.1:+59243121 None:intergenic
GGTGTTGTCTATTGCATAGG+TGG 0.580209 1.1:+59243322 None:intergenic
TTAGAGGCTGCGCAGTTACA+CGG 0.582164 1.1:-59242324 MS.gene74897:CDS
AATTAGGGTTTATTATGGGT+AGG 0.582942 1.1:-59241987 MS.gene74897:CDS
AACAAGTGTCACAACGACAT+TGG 0.584782 1.1:-59242568 MS.gene74897:CDS
TGTAGTCACCGGAAGGTGAA+GGG 0.585601 1.1:+59243078 None:intergenic
CATGGGCCGCGATTGTGTGT+GGG 0.586850 1.1:-59242413 MS.gene74897:CDS
CCCAAATAAAACATCACCAT+CGG 0.587790 1.1:+59242875 None:intergenic
ATAGGTGTTGTCTATTGCAT+AGG 0.589178 1.1:+59243319 None:intergenic
CGAGGGATGATGAGACTGCA+GGG 0.589259 1.1:-59242080 MS.gene74897:CDS
TGAATAAGATGAAATTGTTG+AGG 0.592343 1.1:-59242107 MS.gene74897:CDS
AACAAACCCACACACAATCG+CGG 0.593035 1.1:+59242407 None:intergenic
GCATAGGTAGTCTGCAACGG+CGG 0.597113 1.1:+59243382 None:intergenic
AGCCGAAGAGATAGTAGGAG+AGG 0.597353 1.1:+59243168 None:intergenic
AACGTGATTGACGTGTGTAA+CGG 0.598954 1.1:-59242486 MS.gene74897:CDS
CCACCCATCAACAATCCATA+CGG 0.604211 1.1:+59242219 None:intergenic
GAGATAGTAGGAGAGGCCAC+CGG 0.607346 1.1:+59243175 None:intergenic
TGCAGTGGTGGTGAGGAGTG+GGG 0.607421 1.1:+59243412 None:intergenic
CCACACACAATCGCGGCCCA+TGG 0.607906 1.1:+59242414 None:intergenic
CGGCCGATGAAACCATTGGA+GGG 0.608253 1.1:+59243125 None:intergenic
GCGGCCGATGAAACCATTGG+AGG 0.609997 1.1:+59243124 None:intergenic
CCGTATGGATTGTTGATGGG+TGG 0.612064 1.1:-59242219 MS.gene74897:CDS
GGTGTGGTTCACATGGTGGG+TGG 0.612109 1.1:-59242825 MS.gene74897:CDS
AAATAACGGCACCATTGTGA+CGG 0.614051 1.1:+59242137 None:intergenic
GCTGCTGCCGGTATCACCAG+TGG 0.615421 1.1:-59243023 MS.gene74897:CDS
TGTGTGGGTTTGTTGCGGCG+TGG 0.623345 1.1:-59242398 MS.gene74897:CDS
TGGACTTGACTAGACATGGT+GGG 0.625359 1.1:-59242056 MS.gene74897:CDS
GATTGTGTGTGGGTTTGTTG+CGG 0.627273 1.1:-59242403 MS.gene74897:CDS
TGCCACCGGACACGATACAC+CGG 0.628233 1.1:-59241935 MS.gene74897:CDS
CACCGGTGTATCGTGTCCGG+TGG 0.628689 1.1:+59241933 None:intergenic
GGTGCATAGGTAGTCTGCAA+CGG 0.633576 1.1:+59243379 None:intergenic
GAAATTGTTGAGGATATCGA+GGG 0.633706 1.1:-59242097 MS.gene74897:CDS
TGCTTATGCGTATCATGACG+AGG 0.643185 1.1:-59242031 MS.gene74897:CDS
GAAGGTGCACTGATTGGCAC+CGG 0.646404 1.1:+59241916 None:intergenic
GGCCACCGGCTGCAGCGTCG+AGG 0.648352 1.1:+59243189 None:intergenic
AGGCTGCGCAGTTACACGGA+GGG 0.649107 1.1:-59242320 MS.gene74897:CDS
AAGAAGCTGTAGTCACCGGA+AGG 0.653398 1.1:+59243071 None:intergenic
AACGGCGGTAGCGTTTGCAG+TGG 0.660892 1.1:+59243397 None:intergenic
ACATGGTGGGTGGTATAGCA+GGG 0.662991 1.1:-59242815 MS.gene74897:CDS
ACCGGCAAAGTCAATAACAC+CGG 0.670560 1.1:+59242851 None:intergenic
TGGGTGGGTTACCGTCACAA+TGG 0.675313 1.1:-59242148 MS.gene74897:CDS
AAACCCAATGCGAAACGATG+GGG 0.679819 1.1:+59242931 None:intergenic
TCGTGATGATATCACACTGA+AGG 0.680385 1.1:+59241898 None:intergenic
GGCAGAGGGAGACACACTCG+TGG 0.689003 1.1:+59241954 None:intergenic
ATGAGATTTATGGGTCCGGG+AGG 0.689021 1.1:-59242242 MS.gene74897:CDS
GGGATGGACTTGACTAGACA+TGG 0.695287 1.1:-59242060 MS.gene74897:CDS
ATGGACTTGACTAGACATGG+TGG 0.698702 1.1:-59242057 MS.gene74897:CDS
TTACGGGATTGTTTGCAAAG+GGG 0.721445 1.1:-59242275 MS.gene74897:CDS
GAGGCTGCGCAGTTACACGG+AGG 0.735378 1.1:-59242321 MS.gene74897:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAACAAAAGGAATTATTA+TGG - chr1.1:59242743-59242762 MS.gene74897:CDS 20.0%
!! ATATATTCTTCTTTCTTAAC+CGG - chr1.1:59242392-59242411 MS.gene74897:CDS 20.0%
!!! TAACAACTTTGTTTAGTAAA+CGG - chr1.1:59242828-59242847 MS.gene74897:CDS 20.0%
! AAAGGAATTATTATGGTCAA+TGG - chr1.1:59242750-59242769 MS.gene74897:CDS 25.0%
! AGGAAATTAGGGTTTATTAT+GGG - chr1.1:59243364-59243383 MS.gene74897:CDS 25.0%
! ATGGAAATATGAGTAACAAA+AGG - chr1.1:59242732-59242751 MS.gene74897:CDS 25.0%
! TAGGAAATTAGGGTTTATTA+TGG - chr1.1:59243363-59243382 MS.gene74897:CDS 25.0%
! TGAATAAGATGAAATTGTTG+AGG - chr1.1:59243248-59243267 MS.gene74897:CDS 25.0%
! TGCAATTGTTAAAAATGAAC+CGG + chr1.1:59242705-59242724 None:intergenic 25.0%
! TTAACAATTGCAAAAAGCTA+TGG - chr1.1:59242713-59242732 MS.gene74897:CDS 25.0%
! TTATTCAGCCCATAAAATAA+CGG + chr1.1:59243235-59243254 None:intergenic 25.0%
! TTTAGTAAACGGTTATTAGT+TGG - chr1.1:59242839-59242858 MS.gene74897:CDS 25.0%
! TTTGATTGGGCTTAATAAAT+TGG - chr1.1:59242982-59243001 MS.gene74897:CDS 25.0%
!! AGTATGTTGATGAGATTTAT+GGG - chr1.1:59243104-59243123 MS.gene74897:CDS 25.0%
!!! CTTTTTTATTATGGTTTGGT+TGG - chr1.1:59242666-59242685 MS.gene74897:CDS 25.0%
!!! GGTTCTTTTTTATTATGGTT+TGG - chr1.1:59242662-59242681 MS.gene74897:CDS 25.0%
!!! TGTTGGGTTCTTTTTTATTA+TGG - chr1.1:59242657-59242676 MS.gene74897:CDS 25.0%
AATTAGGGTTTATTATGGGT+AGG - chr1.1:59243368-59243387 MS.gene74897:CDS 30.0%
ACGAGTCTATTAGGAAATTA+GGG - chr1.1:59243353-59243372 MS.gene74897:CDS 30.0%
CAATTGTTAAAAATGAACCG+GGG + chr1.1:59242703-59242722 None:intergenic 30.0%
GCAATTGTTAAAAATGAACC+GGG + chr1.1:59242704-59242723 None:intergenic 30.0%
GCTTAATAAATTGGCGATTA+AGG - chr1.1:59242991-59243010 MS.gene74897:CDS 30.0%
TTATAGAAGGTCCTAGAATA+GGG - chr1.1:59242576-59242595 MS.gene74897:CDS 30.0%
TTTATAGAAGGTCCTAGAAT+AGG - chr1.1:59242575-59242594 MS.gene74897:CDS 30.0%
! ATTTGAGATGGTGTTGAATT+GGG + chr1.1:59242000-59242019 None:intergenic 30.0%
! GAGTATGTTGATGAGATTTA+TGG - chr1.1:59243103-59243122 MS.gene74897:CDS 30.0%
! TATTTGAGATGGTGTTGAAT+TGG + chr1.1:59242001-59242020 None:intergenic 30.0%
!! TTATTATGGTTTGGTTGGTA+CGG - chr1.1:59242671-59242690 MS.gene74897:CDS 30.0%
ATAAGCTGAGAAGAGAAGAT+AGG + chr1.1:59242057-59242076 None:intergenic 35.0%
ATATGAGATATGCCACGAAT+TGG + chr1.1:59242376-59242395 None:intergenic 35.0%
CCCAAATAAAACATCACCAT+CGG + chr1.1:59242483-59242502 None:intergenic 35.0%
GAAATTGTTGAGGATATCGA+GGG - chr1.1:59243258-59243277 MS.gene74897:CDS 35.0%
GAAGTATGATGATCCATTAG+AGG - chr1.1:59243015-59243034 MS.gene74897:CDS 35.0%
GACGAGTCTATTAGGAAATT+AGG - chr1.1:59243352-59243371 MS.gene74897:CDS 35.0%
GTCAGTGAGTTTATTTGAGA+TGG + chr1.1:59242012-59242031 None:intergenic 35.0%
TATGAGATATGCCACGAATT+GGG + chr1.1:59242375-59242394 None:intergenic 35.0%
TGAAATTGTTGAGGATATCG+AGG - chr1.1:59243257-59243276 MS.gene74897:CDS 35.0%
TTTACGGGATTGTTTGCAAA+GGG - chr1.1:59243079-59243098 MS.gene74897:CDS 35.0%
! ATAGGTGTTGTCTATTGCAT+AGG + chr1.1:59242039-59242058 None:intergenic 35.0%
! CATGATGTTCATGGTGTTTT+TGG + chr1.1:59242135-59242154 None:intergenic 35.0%
!! ACCGATGGTGATGTTTTATT+TGG - chr1.1:59242479-59242498 MS.gene74897:CDS 35.0%
!! TATTATGGTTTGGTTGGTAC+GGG - chr1.1:59242672-59242691 MS.gene74897:CDS 35.0%
!! TTGAGGTGTTGGTTATTTGT+GGG - chr1.1:59243188-59243207 MS.gene74897:CDS 35.0%
!!! ACAATGGTGCCGTTATTTTA+TGG - chr1.1:59243223-59243242 MS.gene74897:CDS 35.0%
!!! CAATGGTGCCGTTATTTTAT+GGG - chr1.1:59243224-59243243 MS.gene74897:CDS 35.0%
!!! CCGATGGTGATGTTTTATTT+GGG - chr1.1:59242480-59242499 MS.gene74897:CDS 35.0%
AAATAACGGCACCATTGTGA+CGG + chr1.1:59243221-59243240 None:intergenic 40.0%
AACAAGTGTCACAACGACAT+TGG - chr1.1:59242787-59242806 MS.gene74897:CDS 40.0%
AACGATGGGGTAAACAAAAC+CGG + chr1.1:59242414-59242433 None:intergenic 40.0%
AACGGTTATTAGTTGGACAC+TGG - chr1.1:59242846-59242865 MS.gene74897:CDS 40.0%
AACGTGATTGACGTGTGTAA+CGG - chr1.1:59242869-59242888 MS.gene74897:CDS 40.0%
AATCCCTTAGACCGAAAAAG+TGG + chr1.1:59242256-59242275 None:intergenic 40.0%
ACAGCTTCTTTCTCTACCAA+TGG - chr1.1:59242297-59242316 MS.gene74897:CDS 40.0%
AGGAAGATGACGAGTCTATT+AGG - chr1.1:59243344-59243363 MS.gene74897:CDS 40.0%
ATTGGTGAGCATGATGTTCA+TGG + chr1.1:59242144-59242163 None:intergenic 40.0%
CAGCTTCTTTCTCTACCAAT+GGG - chr1.1:59242298-59242317 MS.gene74897:CDS 40.0%
GTTTACGGGATTGTTTGCAA+AGG - chr1.1:59243078-59243097 MS.gene74897:CDS 40.0%
TATTATGGGTAGGATTGAGC+CGG - chr1.1:59243378-59243397 MS.gene74897:CDS 40.0%
TTACGGGATTGTTTGCAAAG+GGG - chr1.1:59243080-59243099 MS.gene74897:CDS 40.0%
TTGATGAGATTTATGGGTCC+GGG - chr1.1:59243110-59243129 MS.gene74897:CDS 40.0%
TTGTTCTGTTGTGGAACCAT+GGG - chr1.1:59242925-59242944 MS.gene74897:CDS 40.0%
! GTTGATGAGATTTATGGGTC+CGG - chr1.1:59243109-59243128 MS.gene74897:CDS 40.0%
! TATGGTCAATGGAGTGCTAT+TGG - chr1.1:59242761-59242780 MS.gene74897:CDS 40.0%
!! GTTGAGGTGTTGGTTATTTG+TGG - chr1.1:59243187-59243206 MS.gene74897:CDS 40.0%
!! TTATGGGGGGCATTTATAGA+AGG - chr1.1:59242563-59242582 MS.gene74897:CDS 40.0%
!!! GGTGATGTTTTATTTGGGTC+CGG - chr1.1:59242485-59242504 MS.gene74897:CDS 40.0%
AAACCCAATGCGAAACGATG+GGG + chr1.1:59242427-59242446 None:intergenic 45.0%
AACAAACCCACACACAATCG+CGG + chr1.1:59242951-59242970 None:intergenic 45.0%
AACTGCAGGTTGTTCTGTTG+TGG - chr1.1:59242916-59242935 MS.gene74897:CDS 45.0%
ACCGGCAAAGTCAATAACAC+CGG + chr1.1:59242507-59242526 None:intergenic 45.0%
ATGGACTTGACTAGACATGG+TGG - chr1.1:59243298-59243317 MS.gene74897:CDS 45.0%
CAAACCCAATGCGAAACGAT+GGG + chr1.1:59242428-59242447 None:intergenic 45.0%
CCACCCATCAACAATCCATA+CGG + chr1.1:59243139-59243158 None:intergenic 45.0%
GAATTGGGTTCTCTCTGCAA+TGG + chr1.1:59242360-59242379 None:intergenic 45.0%
GACGTGTGTAACGGTTTACT+TGG - chr1.1:59242878-59242897 MS.gene74897:CDS 45.0%
GAGAAAGAAGCTGTAGTCAC+CGG + chr1.1:59242291-59242310 None:intergenic 45.0%
GTCCTTTCAATGCAACAGAC+CGG + chr1.1:59242619-59242638 None:intergenic 45.0%
GTGTGTAACGGTTTACTTGG+CGG - chr1.1:59242881-59242900 MS.gene74897:CDS 45.0%
GTTGTTCTGTTGTGGAACCA+TGG - chr1.1:59242924-59242943 MS.gene74897:CDS 45.0%
TACGGGATTGTTTGCAAAGG+GGG - chr1.1:59243081-59243100 MS.gene74897:CDS 45.0%
TGCTTATGCGTATCATGACG+AGG - chr1.1:59243324-59243343 MS.gene74897:CDS 45.0%
TGGACTTGACTAGACATGGT+GGG - chr1.1:59243299-59243318 MS.gene74897:CDS 45.0%
TTACCCCATCGTTTCGCATT+GGG - chr1.1:59242421-59242440 MS.gene74897:CDS 45.0%
TTTACCCCATCGTTTCGCAT+TGG - chr1.1:59242420-59242439 MS.gene74897:CDS 45.0%
! AGGCCGTATGGATTGTTGAT+GGG - chr1.1:59243133-59243152 MS.gene74897:CDS 45.0%
! GGTGTTGTCTATTGCATAGG+TGG + chr1.1:59242036-59242055 None:intergenic 45.0%
! GGTTTTGCTGCTATAACTGC+AGG - chr1.1:59242902-59242921 MS.gene74897:CDS 45.0%
! TATGGATTGTTGATGGGTGG+TGG - chr1.1:59243139-59243158 MS.gene74897:CDS 45.0%
! TGGTGTTGAATTGGGTGCAT+AGG + chr1.1:59241992-59242011 None:intergenic 45.0%
!! AGGTGTTGGTTATTTGTGGG+TGG - chr1.1:59243191-59243210 MS.gene74897:CDS 45.0%
!! GATTGTGTGTGGGTTTGTTG+CGG - chr1.1:59242952-59242971 MS.gene74897:CDS 45.0%
!! GGTGTTGGTTATTTGTGGGT+GGG - chr1.1:59243192-59243211 MS.gene74897:CDS 45.0%
!! GTTATTGACTTTGCCGGTTC+AGG - chr1.1:59242509-59242528 MS.gene74897:CDS 45.0%
!! TCCGGTGTTATTGACTTTGC+CGG - chr1.1:59242503-59242522 MS.gene74897:CDS 45.0%
!!! GTTTTTGGCTCTAACAGAGC+CGG + chr1.1:59242120-59242139 None:intergenic 45.0%
AAGAAGCTGTAGTCACCGGA+AGG + chr1.1:59242287-59242306 None:intergenic 50.0%
AATGGAGCCACTGGTGATAC+CGG + chr1.1:59242342-59242361 None:intergenic 50.0%
AGCCGAAGAGATAGTAGGAG+AGG + chr1.1:59242190-59242209 None:intergenic 50.0%
AGCGAAGCCGAAGAGATAGT+AGG + chr1.1:59242195-59242214 None:intergenic 50.0%
AGGGATTACCCTTCACCTTC+CGG - chr1.1:59242269-59242288 MS.gene74897:CDS 50.0%
AGTGTCACAACGACATTGGC+TGG - chr1.1:59242791-59242810 MS.gene74897:CDS 50.0%
ATGAGATTTATGGGTCCGGG+AGG - chr1.1:59243113-59243132 MS.gene74897:CDS 50.0%
CATGTGAACCACACCTGAAC+CGG + chr1.1:59242525-59242544 None:intergenic 50.0%
CCAAACCCAATGCGAAACGA+TGG + chr1.1:59242429-59242448 None:intergenic 50.0%
CCATCGTTTCGCATTGGGTT+TGG - chr1.1:59242426-59242445 MS.gene74897:CDS 50.0%
CCCTTAGACCGAAAAAGTGG+CGG + chr1.1:59242253-59242272 None:intergenic 50.0%
CTAGAATAGGGCGATTCGAC+CGG - chr1.1:59242588-59242607 MS.gene74897:CDS 50.0%
GCACCCTCCAATGGTTTCAT+CGG - chr1.1:59242227-59242246 MS.gene74897:CDS 50.0%
GGCCTCTCCTACTATCTCTT+CGG - chr1.1:59242185-59242204 MS.gene74897:CDS 50.0%
GGGTGGTATAGCAGGGTTAT+GGG - chr1.1:59242547-59242566 MS.gene74897:CDS 50.0%
GGTGCATAGGTAGTCTGCAA+CGG + chr1.1:59241979-59241998 None:intergenic 50.0%
GGTGGTATAGCAGGGTTATG+GGG - chr1.1:59242548-59242567 MS.gene74897:CDS 50.0%
GTGGTATAGCAGGGTTATGG+GGG - chr1.1:59242549-59242568 MS.gene74897:CDS 50.0%
TCAGGTGTGGTTCACATGGT+GGG - chr1.1:59242527-59242546 MS.gene74897:CDS 50.0%
TGCAGAGAGAACCCAATTCG+TGG - chr1.1:59242361-59242380 MS.gene74897:CDS 50.0%
TGGGTGGTATAGCAGGGTTA+TGG - chr1.1:59242546-59242565 MS.gene74897:CDS 50.0%
TGGTATAGCAGGGTTATGGG+GGG - chr1.1:59242550-59242569 MS.gene74897:CDS 50.0%
TGTAACTGCGCAGCCTCTAA+TGG + chr1.1:59243031-59243050 None:intergenic 50.0%
TGTAGTCACCGGAAGGTGAA+GGG + chr1.1:59242280-59242299 None:intergenic 50.0%
TTAGAGGCTGCGCAGTTACA+CGG - chr1.1:59243031-59243050 MS.gene74897:CDS 50.0%
TTCAGGTGTGGTTCACATGG+TGG - chr1.1:59242526-59242545 MS.gene74897:CDS 50.0%
! CACACTGAAGGTGCACTGAT+TGG + chr1.1:59243448-59243467 None:intergenic 50.0%
! CCGTATGGATTGTTGATGGG+TGG - chr1.1:59243136-59243155 MS.gene74897:CDS 50.0%
! GAGGCCGTATGGATTGTTGA+TGG - chr1.1:59243132-59243151 MS.gene74897:CDS 50.0%
! GGGATGGACTTGACTAGACA+TGG - chr1.1:59243295-59243314 MS.gene74897:CDS 50.0%
! TTAGTCTTCGCCATGCAGCT+TGG - chr1.1:59242077-59242096 MS.gene74897:CDS 50.0%
!! ACATGGTGGGTGGTATAGCA+GGG - chr1.1:59242540-59242559 MS.gene74897:CDS 50.0%
!! GATTGTTGATGGGTGGTGGA+GGG - chr1.1:59243143-59243162 MS.gene74897:CDS 50.0%
!! TGCATGGGGGGTGTTGTTTA+CGG - chr1.1:59243063-59243082 MS.gene74897:CDS 50.0%
!!! CCGCCACTTTTTCGGTCTAA+GGG - chr1.1:59242250-59242269 MS.gene74897:CDS 50.0%
!!! TTCATCGGCCGCCACTTTTT+CGG - chr1.1:59242242-59242261 MS.gene74897:CDS 50.0%
!!! TTGCGGCGTGGGTTTTGATT+GGG - chr1.1:59242969-59242988 MS.gene74897:CDS 50.0%
CAACAATCCATACGGCCTCC+CGG + chr1.1:59243131-59243150 None:intergenic 55.0%
CATGGCGAAACCAAGCTGCA+TGG + chr1.1:59242090-59242109 None:intergenic 55.0%
CGAGGGATGATGAGACTGCA+GGG - chr1.1:59243275-59243294 MS.gene74897:CDS 55.0%
CGGCCGATGAAACCATTGGA+GGG + chr1.1:59242233-59242252 None:intergenic 55.0%
CGGTCGAATCGCCCTATTCT+AGG + chr1.1:59242590-59242609 None:intergenic 55.0%
CGGTTCAGGTGTGGTTCACA+TGG - chr1.1:59242523-59242542 MS.gene74897:CDS 55.0%
CTGTAGTCACCGGAAGGTGA+AGG + chr1.1:59242281-59242300 None:intergenic 55.0%
GAAAGGACATAGCGCGTCGT+TGG - chr1.1:59242631-59242650 MS.gene74897:CDS 55.0%
GAGATAGTAGGAGAGGCCAC+CGG + chr1.1:59242183-59242202 None:intergenic 55.0%
GCATAGGTAGTCTGCAACGG+CGG + chr1.1:59241976-59241995 None:intergenic 55.0%
GGATGATGAGACTGCAGGGA+TGG - chr1.1:59243279-59243298 MS.gene74897:CDS 55.0%
GGCCGGTCTGTTGCATTGAA+AGG - chr1.1:59242614-59242633 MS.gene74897:CDS 55.0%
TCGAGGGATGATGAGACTGC+AGG - chr1.1:59243274-59243293 MS.gene74897:CDS 55.0%
TCTCTCTGCAATGGAGCCAC+TGG + chr1.1:59242351-59242370 None:intergenic 55.0%
TGGTGGAGGGAGGTTGTTTG+CGG - chr1.1:59243156-59243175 MS.gene74897:CDS 55.0%
TTCGGCTTCGCTTTCGCCTT+TGG - chr1.1:59242203-59242222 MS.gene74897:CDS 55.0%
! CATTGGGTTTGGTCTGCCGA+TGG - chr1.1:59242437-59242456 MS.gene74897:CDS 55.0%
! GGATTGTTGATGGGTGGTGG+AGG - chr1.1:59243142-59243161 MS.gene74897:CDS 55.0%
! GGTTTGGTCTGCCGATGGTT+GGG - chr1.1:59242442-59242461 MS.gene74897:CDS 55.0%
! TAGCGTTTGCAGTGGTGGTG+AGG + chr1.1:59241953-59241972 None:intergenic 55.0%
! TTGCAGTGGTGGTGAGGAGT+GGG + chr1.1:59241947-59241966 None:intergenic 55.0%
! TTTGCAGTGGTGGTGAGGAG+TGG + chr1.1:59241948-59241967 None:intergenic 55.0%
!! ACATCACCATCGGTTCGCGT+TGG + chr1.1:59242473-59242492 None:intergenic 55.0%
!! ACCATTGGAGGGTGCTCCAA+AGG + chr1.1:59242222-59242241 None:intergenic 55.0%
!! CACATGGTGGGTGGTATAGC+AGG - chr1.1:59242539-59242558 MS.gene74897:CDS 55.0%
!! CATCACCATCGGTTCGCGTT+GGG + chr1.1:59242472-59242491 None:intergenic 55.0%
!! GAAGGTGCACTGATTGGCAC+CGG + chr1.1:59243442-59243461 None:intergenic 55.0%
!! GCATGGGGGGTGTTGTTTAC+GGG - chr1.1:59243064-59243083 MS.gene74897:CDS 55.0%
!! GTTGCGGCGTGGGTTTTGAT+TGG - chr1.1:59242968-59242987 MS.gene74897:CDS 55.0%
!! TGACTTTGCCGGTTCAGGTG+TGG - chr1.1:59242514-59242533 MS.gene74897:CDS 55.0%
!! TGGGTGGGTTACCGTCACAA+TGG - chr1.1:59243207-59243226 MS.gene74897:CDS 55.0%
!!! GCCGCCACTTTTTCGGTCTA+AGG - chr1.1:59242249-59242268 MS.gene74897:CDS 55.0%
AACAGAGCCGGCACAGAGCA+TGG + chr1.1:59242108-59242127 None:intergenic 60.0%
AACGGCGGTAGCGTTTGCAG+TGG + chr1.1:59241961-59241980 None:intergenic 60.0%
AATGTCCTCGACGCTGCAGC+CGG - chr1.1:59242161-59242180 MS.gene74897:CDS 60.0%
AGGACATAGCGCGTCGTTGG+TGG - chr1.1:59242634-59242653 MS.gene74897:CDS 60.0%
AGGCTGCGCAGTTACACGGA+GGG - chr1.1:59243035-59243054 MS.gene74897:CDS 60.0%
AGTGTGTCTCCCTCTGCCAC+CGG - chr1.1:59243406-59243425 MS.gene74897:CDS 60.0%
ATAGGGCGATTCGACCGGAC+AGG - chr1.1:59242593-59242612 MS.gene74897:CDS 60.0%
ATGCAACAGACCGGCCTGTC+CGG + chr1.1:59242610-59242629 None:intergenic 60.0%
CATGGGCCGCGATTGTGTGT+GGG - chr1.1:59242942-59242961 MS.gene74897:CDS 60.0%
GCGGCCGATGAAACCATTGG+AGG + chr1.1:59242234-59242253 None:intergenic 60.0%
GGTTTCGCCATGCTCTGTGC+CGG - chr1.1:59242098-59242117 MS.gene74897:CDS 60.0%
GTATCGTGTCCGGTGGCAGA+GGG + chr1.1:59243418-59243437 None:intergenic 60.0%
GTGGCGGCCGATGAAACCAT+TGG + chr1.1:59242237-59242256 None:intergenic 60.0%
TGCCACCGGACACGATACAC+CGG - chr1.1:59243420-59243439 MS.gene74897:CDS 60.0%
TGTATCGTGTCCGGTGGCAG+AGG + chr1.1:59243419-59243438 None:intergenic 60.0%
! GGGTTTGGTCTGCCGATGGT+TGG - chr1.1:59242441-59242460 MS.gene74897:CDS 60.0%
! GGTGTGGTTCACATGGTGGG+TGG - chr1.1:59242530-59242549 MS.gene74897:CDS 60.0%
! GGTTGGTACGGGTTCAACCC+CGG - chr1.1:59242683-59242702 MS.gene74897:CDS 60.0%
! TGCAGTGGTGGTGAGGAGTG+GGG + chr1.1:59241946-59241965 None:intergenic 60.0%
!! AGCGCGTCGTTGGTGGTGTT+GGG - chr1.1:59242641-59242660 MS.gene74897:CDS 60.0%
!! GCCTTTGGAGCACCCTCCAA+TGG - chr1.1:59242218-59242237 MS.gene74897:CDS 60.0%
!! GTGTGGGTTTGTTGCGGCGT+GGG - chr1.1:59242958-59242977 MS.gene74897:CDS 60.0%
!! TAGCGCGTCGTTGGTGGTGT+TGG - chr1.1:59242640-59242659 MS.gene74897:CDS 60.0%
!! TGGCACCGGTGTATCGTGTC+CGG + chr1.1:59243428-59243447 None:intergenic 60.0%
!! TGTGTGGGTTTGTTGCGGCG+TGG - chr1.1:59242957-59242976 MS.gene74897:CDS 60.0%
!! TGTTGATGGGTGGTGGAGGG+AGG - chr1.1:59243146-59243165 MS.gene74897:CDS 60.0%
AGGGAGGTTGTTTGCGGCGC+AGG - chr1.1:59243162-59243181 MS.gene74897:CDS 65.0%
CACCGGTGTATCGTGTCCGG+TGG + chr1.1:59243425-59243444 None:intergenic 65.0%
CAGCGATGGCGAAGGCCCAT+TGG + chr1.1:59242316-59242335 None:intergenic 65.0%
CCACACACAATCGCGGCCCA+TGG + chr1.1:59242944-59242963 None:intergenic 65.0%
CCATGGGCCGCGATTGTGTG+TGG - chr1.1:59242941-59242960 MS.gene74897:CDS 65.0%
GAGGCTGCGCAGTTACACGG+AGG - chr1.1:59243034-59243053 MS.gene74897:CDS 65.0%
GAGGGAGACACACTCGTGGC+CGG + chr1.1:59243400-59243419 None:intergenic 65.0%
GAGGTTGTTTGCGGCGCAGG+TGG - chr1.1:59243165-59243184 MS.gene74897:CDS 65.0%
GCGCAGTTACACGGAGGGTG+CGG - chr1.1:59243040-59243059 MS.gene74897:CDS 65.0%
GCTGCTGCCGGTATCACCAG+TGG - chr1.1:59242332-59242351 MS.gene74897:CDS 65.0%
GGCAGAGGGAGACACACTCG+TGG + chr1.1:59243404-59243423 None:intergenic 65.0%
GGCGCAGGTGGTTGAGGTGT+TGG - chr1.1:59243177-59243196 MS.gene74897:CDS 65.0%
GGCGGTAGCGTTTGCAGTGG+TGG + chr1.1:59241958-59241977 None:intergenic 65.0%
GGTGATACCGGCAGCAGCGA+TGG + chr1.1:59242330-59242349 None:intergenic 65.0%
GTTTGCGGCGCAGGTGGTTG+AGG - chr1.1:59243171-59243190 MS.gene74897:CDS 65.0%
TATGGGTCCGGGAGGCCGTA+TGG - chr1.1:59243121-59243140 MS.gene74897:CDS 65.0%
! ACACGGAGGGTGCGGTGCAT+GGG - chr1.1:59243048-59243067 MS.gene74897:CDS 65.0%
! GGCTGCAGCGTCGAGGACAT+TGG + chr1.1:59242162-59242181 None:intergenic 65.0%
! TACACGGAGGGTGCGGTGCA+TGG - chr1.1:59243047-59243066 MS.gene74897:CDS 65.0%
!! ACCATCGGTTCGCGTTGGGC+TGG + chr1.1:59242468-59242487 None:intergenic 65.0%
!! CGTTGGGCTGGCCCAACCAT+CGG + chr1.1:59242456-59242475 None:intergenic 65.0%
ACCGGCAGCAGCGATGGCGA+AGG + chr1.1:59242324-59242343 None:intergenic 70.0%
GAGGAGTGGGGCGAGGTCTG+TGG + chr1.1:59241934-59241953 None:intergenic 70.0%
GCCAGCCCAACGCGAACCGA+TGG - chr1.1:59242464-59242483 MS.gene74897:CDS 70.0%
GCCTTCGCCATCGCTGCTGC+CGG - chr1.1:59242320-59242339 MS.gene74897:CDS 70.0%
GGCGATTCGACCGGACAGGC+CGG - chr1.1:59242597-59242616 MS.gene74897:CDS 70.0%
! ACGGAGGGTGCGGTGCATGG+GGG - chr1.1:59243050-59243069 MS.gene74897:CDS 70.0%
! CACGGAGGGTGCGGTGCATG+GGG - chr1.1:59243049-59243068 MS.gene74897:CDS 70.0%
! TGGTGGTGAGGAGTGGGGCG+AGG + chr1.1:59241941-59241960 None:intergenic 70.0%
GTCCTCGACGCTGCAGCCGG+TGG - chr1.1:59242164-59242183 MS.gene74897:CDS 75.0%
! CGGAGGGTGCGGTGCATGGG+GGG - chr1.1:59243051-59243070 MS.gene74897:CDS 75.0%
!! GGCCACCGGCTGCAGCGTCG+AGG + chr1.1:59242169-59242188 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 59241909 59243468 59241909 ID=MS.gene74897
chr1.1 mRNA 59241909 59243468 59241909 ID=MS.gene74897.t1;Parent=MS.gene74897
chr1.1 exon 59241909 59243468 59241909 ID=MS.gene74897.t1.exon1;Parent=MS.gene74897.t1
chr1.1 CDS 59241909 59243468 59241909 ID=cds.MS.gene74897.t1;Parent=MS.gene74897.t1
Gene Sequence

>MS.gene74897

ATGGCTTCTCTATCTTGCTCAGCCACAGACCTCGCCCCACTCCTCACCACCACTGCAAACGCTACCGCCGTTGCAGACTACCTATGCACCCAATTCAACACCATCTCAAATAAACTCACTGACACCACCTATGCAATAGACAACACCTATCTTCTCTTCTCAGCTTATTTAGTCTTCGCCATGCAGCTTGGTTTCGCCATGCTCTGTGCCGGCTCTGTTAGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCAGCCGGTGGCCTCTCCTACTATCTCTTCGGCTTCGCTTTCGCCTTTGGAGCACCCTCCAATGGTTTCATCGGCCGCCACTTTTTCGGTCTAAGGGATTACCCTTCACCTTCCGGTGACTACAGCTTCTTTCTCTACCAATGGGCCTTCGCCATCGCTGCTGCCGGTATCACCAGTGGCTCCATTGCAGAGAGAACCCAATTCGTGGCATATCTCATATATTCTTCTTTCTTAACCGGTTTTGTTTACCCCATCGTTTCGCATTGGGTTTGGTCTGCCGATGGTTGGGCCAGCCCAACGCGAACCGATGGTGATGTTTTATTTGGGTCCGGTGTTATTGACTTTGCCGGTTCAGGTGTGGTTCACATGGTGGGTGGTATAGCAGGGTTATGGGGGGCATTTATAGAAGGTCCTAGAATAGGGCGATTCGACCGGACAGGCCGGTCTGTTGCATTGAAAGGACATAGCGCGTCGTTGGTGGTGTTGGGTTCTTTTTTATTATGGTTTGGTTGGTACGGGTTCAACCCCGGTTCATTTTTAACAATTGCAAAAAGCTATGGAAATATGAGTAACAAAAGGAATTATTATGGTCAATGGAGTGCTATTGGAAGAACAAGTGTCACAACGACATTGGCTGGATGCACTGCAGCTTTAACAACTTTGTTTAGTAAACGGTTATTAGTTGGACACTGGAACGTGATTGACGTGTGTAACGGTTTACTTGGCGGTTTTGCTGCTATAACTGCAGGTTGTTCTGTTGTGGAACCATGGGCCGCGATTGTGTGTGGGTTTGTTGCGGCGTGGGTTTTGATTGGGCTTAATAAATTGGCGATTAAGGTGAAGTATGATGATCCATTAGAGGCTGCGCAGTTACACGGAGGGTGCGGTGCATGGGGGGTGTTGTTTACGGGATTGTTTGCAAAGGGGGAGTATGTTGATGAGATTTATGGGTCCGGGAGGCCGTATGGATTGTTGATGGGTGGTGGAGGGAGGTTGTTTGCGGCGCAGGTGGTTGAGGTGTTGGTTATTTGTGGGTGGGTTACCGTCACAATGGTGCCGTTATTTTATGGGCTGAATAAGATGAAATTGTTGAGGATATCGAGGGATGATGAGACTGCAGGGATGGACTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGACGAGGAAGATGACGAGTCTATTAGGAAATTAGGGTTTATTATGGGTAGGATTGAGCCGGCCACGAGTGTGTCTCCCTCTGCCACCGGACACGATACACCGGTGCCAATCAGTGCACCTTCAGTGTGA
Protein sequence

>MS.gene74897.t1

MASLSCSATDLAPLLTTTANATAVADYLCTQFNTISNKLTDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKSYGNMSNKRNYYGQWSAIGRTSVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGSGRPYGLLMGGGGRLFAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKLGFIMGRIEPATSVSPSATGHDTPVPISAPSV