AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005054

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005054.t1 MTR_1g079760 97.303 519 14 0 1 519 1 519 0.0 1025
MS.gene005054.t1 MTR_1g045550 73.281 509 124 5 1 506 1 500 0.0 744
MS.gene005054.t1 MTR_7g098930 72.912 491 127 3 1 489 1 487 0.0 719
MS.gene005054.t1 MTR_7g113340 71.984 489 131 3 1 487 1 485 0.0 707
MS.gene005054.t1 MTR_3g463730 67.038 449 137 4 40 484 7 448 0.0 595
MS.gene005054.t1 MTR_7g115050 28.608 388 217 14 112 479 100 447 5.84e-26 111
MS.gene005054.t1 MTR_1g036410 25.107 466 282 15 47 484 24 450 7.52e-21 95.9
MS.gene005054.t1 MTR_8g074750 25.304 494 298 17 47 515 30 477 5.32e-20 93.2
MS.gene005054.t1 MTR_7g069640 26.526 475 282 14 47 487 22 463 5.63e-17 84.0
MS.gene005054.t1 MTR_4g017820 27.439 492 290 17 47 506 22 478 3.32e-16 81.6
MS.gene005054.t1 MTR_8g095040 24.947 473 290 12 47 487 29 468 1.39e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005054.t1 AT1G64780 77.148 512 106 6 2 506 4 511 0.0 782
MS.gene005054.t1 AT4G13510 74.074 513 119 7 4 514 1 501 0.0 756
MS.gene005054.t1 AT3G24300 73.123 506 119 4 3 506 4 494 0.0 742
MS.gene005054.t1 AT3G24290 74.948 483 112 4 3 483 4 479 0.0 724
MS.gene005054.t1 AT4G28700 72.189 507 129 6 2 501 3 504 0.0 702
MS.gene005054.t1 AT2G38290 26.078 464 288 13 47 488 20 450 3.42e-22 100
MS.gene005054.t1 AT2G38290 26.870 361 224 10 135 488 7 334 8.40e-20 91.7

Find 196 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTATGTTGATGAGATTTA+TGG 0.173966 1.4:-64699424 MS.gene005054:CDS
GACGAGTCTATTAGGAAATT+AGG 0.214176 1.4:-64699175 MS.gene005054:CDS
TTTGATTGGGCTTAATAAAT+TGG 0.218891 1.4:-64699545 MS.gene005054:CDS
GCTTAATAAATTGGCGATTA+AGG 0.220724 1.4:-64699536 MS.gene005054:CDS
GGCCTCTCCTACTATCTATT+TGG 0.247116 1.4:-64700342 MS.gene005054:CDS
TTTGGCTTTGCTTTCGCCTT+TGG 0.288902 1.4:-64700324 MS.gene005054:CDS
GTTATTGACTTTGCCGGTTC+AGG 0.294088 1.4:-64700018 MS.gene005054:CDS
GGGTGGTATAGCAGGGTTAT+GGG 0.312935 1.4:-64699980 MS.gene005054:CDS
CGGTCGAACCGCCCTATTCT+AGG 0.319056 1.4:+64699940 None:intergenic
TCCGGTGTTATTGACTTTGC+CGG 0.323221 1.4:-64700024 MS.gene005054:CDS
TATGGTCAATGGAGTGCTAT+TGG 0.333213 1.4:-64699766 MS.gene005054:CDS
AAGGGATTACCCTTCACCTT+CGG 0.337397 1.4:-64700259 MS.gene005054:CDS
AGGGAGGTTGTTTGCGGCGC+AGG 0.338172 1.4:-64699365 MS.gene005054:CDS
CACGGAGGGTGTGGCGCATG+GGG 0.339247 1.4:-64699478 MS.gene005054:CDS
CACATGGTGGGTGGTATAGC+AGG 0.340009 1.4:-64699988 MS.gene005054:CDS
AGGAAGATGACGAGTCTATT+AGG 0.343254 1.4:-64699183 MS.gene005054:CDS
ACGAGTCTATTAGGAAATTA+GGG 0.347347 1.4:-64699174 MS.gene005054:CDS
TGTAACTGCGCAGCCTCTAA+TGG 0.347657 1.4:+64699499 None:intergenic
AGGGATTACCCTTCACCTTC+GGG 0.348884 1.4:-64700258 MS.gene005054:CDS
CCATCGTTTCGCATTGGGTT+TGG 0.355981 1.4:-64700101 MS.gene005054:CDS
GTTGAGGTGCTGGTTATTTG+TGG 0.363153 1.4:-64699340 MS.gene005054:CDS
ACCATTGGTTCGCGTTGGGC+TGG 0.366798 1.4:+64700062 None:intergenic
TAGCGCGTCGTTGGTGGTGT+TGG 0.373610 1.4:-64699887 MS.gene005054:CDS
TTGCGGTGGTGGTGAGGAGT+GGG 0.375025 1.4:+64700583 None:intergenic
TGCAACGGCGGTTGCGTTTG+CGG 0.376248 1.4:+64700566 None:intergenic
TTGAGGTGCTGGTTATTTGT+GGG 0.377948 1.4:-64699339 MS.gene005054:CDS
AGTATGTTGATGAGATTTAT+GGG 0.378337 1.4:-64699423 MS.gene005054:CDS
GGCGGTTGCGTTTGCGGTGG+TGG 0.380612 1.4:+64700572 None:intergenic
TGGTGGTGAGGAGTGGGGCT+AGG 0.382794 1.4:+64700589 None:intergenic
ATTTGAGATGGTGTTGAATT+GGG 0.384973 1.4:+64700530 None:intergenic
TTACCCCATCGTTTCGCATT+GGG 0.385239 1.4:-64700106 MS.gene005054:CDS
ACACGGAGGGTGTGGCGCAT+GGG 0.388550 1.4:-64699479 MS.gene005054:CDS
TTTATAGAAGGTCCTAGAAT+AGG 0.393823 1.4:-64699952 MS.gene005054:CDS
TTTAGTAAACGGTTATTAGT+TGG 0.394285 1.4:-64699688 MS.gene005054:CDS
TACACGGAGGGTGTGGCGCA+TGG 0.398795 1.4:-64699480 MS.gene005054:CDS
TATTTGAGATGGTGTTGAAT+TGG 0.400022 1.4:+64700529 None:intergenic
TGACAACTTTGTTTAGTAAA+CGG 0.402627 1.4:-64699699 MS.gene005054:CDS
GGTTTGGTCTGCCGATGGTT+GGG 0.403385 1.4:-64700085 MS.gene005054:CDS
TGGGTGGTATAGCAGGGTTA+TGG 0.404483 1.4:-64699981 MS.gene005054:CDS
AGTAACAAAAGGAATTATTA+TGG 0.405005 1.4:-64699784 MS.gene005054:CDS
CATGTGAACCACACCTGAAC+CGG 0.411513 1.4:+64700005 None:intergenic
GGCGCAGGTGGTTGAGGTGC+TGG 0.412619 1.4:-64699350 MS.gene005054:CDS
TATTATGGTTTGGTTGGTAC+GGG 0.415535 1.4:-64699855 MS.gene005054:CDS
TTGATGAGATTTATGGGATA+GGG 0.415705 1.4:-64699417 MS.gene005054:CDS
CGGAGGGTGTGGCGCATGGG+GGG 0.418635 1.4:-64699476 MS.gene005054:CDS
CATCACCATTGGTTCGCGTT+GGG 0.420093 1.4:+64700058 None:intergenic
TTATTATGGTTTGGTTGGTA+CGG 0.423451 1.4:-64699856 MS.gene005054:CDS
AAAAGAAGAATATATGAGAT+AGG 0.425528 1.4:+64700143 None:intergenic
GTGGTATAGCAGGGTTATGG+GGG 0.427928 1.4:-64699978 MS.gene005054:CDS
ACGGAGGGTGTGGCGCATGG+GGG 0.428519 1.4:-64699477 MS.gene005054:CDS
ATGCAACAGACCGGCCTGTC+CGG 0.429149 1.4:+64699920 None:intergenic
AGCGCGTCGTTGGTGGTGTT+GGG 0.430363 1.4:-64699886 MS.gene005054:CDS
TGGAGTGCTATTGGAAGAAC+AGG 0.430989 1.4:-64699757 MS.gene005054:CDS
AAAGGAATTATTATGGTCAA+TGG 0.435762 1.4:-64699777 MS.gene005054:CDS
TGTTGATGGGTGGTGGAGGG+AGG 0.437827 1.4:-64699381 MS.gene005054:CDS
AGGTGCTGGTTATTTGTGGG+TGG 0.439612 1.4:-64699336 MS.gene005054:CDS
GGTGCTGGTTATTTGTGGGT+GGG 0.440274 1.4:-64699335 MS.gene005054:CDS
CAGCGATGGCGAAGGCCCAT+TGG 0.442094 1.4:+64700214 None:intergenic
GGATTGTTGATGGGTGGTGG+AGG 0.443117 1.4:-64699385 MS.gene005054:CDS
GTTGATGAGATTTATGGGAT+AGG 0.452271 1.4:-64699418 MS.gene005054:CDS
CACACTGAAGGTGCACTGAT+TGG 0.453333 1.4:+64699082 None:intergenic
TTTACCCCATCGTTTCGCAT+TGG 0.453403 1.4:-64700107 MS.gene005054:CDS
GGTTTCGCCATGCTCTGCGC+AGG 0.454596 1.4:-64700429 MS.gene005054:CDS
GGTGGTATAGCAGGGTTATG+GGG 0.457348 1.4:-64699979 MS.gene005054:CDS
TTATAGAAGGTCCTAGAATA+GGG 0.458590 1.4:-64699951 MS.gene005054:CDS
GCCTTCGCCATCGCTGCTGC+CGG 0.459814 1.4:-64700207 MS.gene005054:CDS
TGCAGAGAGAACTCAATTTG+TGG 0.460728 1.4:-64700166 MS.gene005054:CDS
GCACCCTCCAACGGCTTCAT+CGG 0.461259 1.4:-64700300 MS.gene005054:CDS
TAGGAAATTAGGGTTTATGA+TGG 0.464007 1.4:-64699164 MS.gene005054:CDS
GATTGTTGATGGGTGGTGGA+GGG 0.464090 1.4:-64699384 MS.gene005054:CDS
TATGGATTGTTGATGGGTGG+TGG 0.466509 1.4:-64699388 MS.gene005054:CDS
GGGTTTGGTCTGCCGATGGT+TGG 0.467295 1.4:-64700086 MS.gene005054:CDS
GTTTGCGGCGCAGGTGGTTG+AGG 0.472995 1.4:-64699356 MS.gene005054:CDS
TGGTGGAGGGAGGTTGTTTG+CGG 0.475634 1.4:-64699371 MS.gene005054:CDS
CTAAATAAGCTGAGAAGAGA+AGG 0.476158 1.4:+64700469 None:intergenic
GTGTGGGTTTGTTGCGGCGT+GGG 0.479169 1.4:-64699569 MS.gene005054:CDS
GTTGTTCTGTTGTGGAACCA+TGG 0.481083 1.4:-64699603 MS.gene005054:CDS
CTAGAATAGGGCGGTTCGAC+CGG 0.487260 1.4:-64699939 MS.gene005054:CDS
AACGATGGGGTAAACAAAAC+CGG 0.487884 1.4:+64700116 None:intergenic
CGTTGGGCTGGCCCAACCAT+CGG 0.489504 1.4:+64700074 None:intergenic
GTCGCTGAGTTTATTTGAGA+TGG 0.491035 1.4:+64700518 None:intergenic
TTTACGGGATTGTTTGCAAA+GGG 0.491383 1.4:-64699448 MS.gene005054:CDS
GAAGTATGATGATCCATTAG+AGG 0.491623 1.4:-64699512 MS.gene005054:CDS
GAGGAGTGGGGCTAGGTCTG+TGG 0.495166 1.4:+64700596 None:intergenic
TCAGGTGTGGTTCACATGGT+GGG 0.496702 1.4:-64700000 MS.gene005054:CDS
TTTGCGGTGGTGGTGAGGAG+TGG 0.496837 1.4:+64700582 None:intergenic
ACAGCTTCTTTCTCTACCAA+TGG 0.497981 1.4:-64700230 MS.gene005054:CDS
GCCGTTGGAGGGTGCTCCAA+AGG 0.499692 1.4:+64700308 None:intergenic
CCATGGGCCGCGATTGTGTG+TGG 0.504024 1.4:-64699586 MS.gene005054:CDS
ATTGGTGAGCATGATGTTCA+TGG 0.505916 1.4:+64700386 None:intergenic
CATTGGGTTTGGTCTGCCGA+TGG 0.506434 1.4:-64700090 MS.gene005054:CDS
ACATCACCATTGGTTCGCGT+TGG 0.507320 1.4:+64700057 None:intergenic
GAGGTTGTTTGCGGCGCAGG+TGG 0.508529 1.4:-64699362 MS.gene005054:CDS
GAAAGGACATAGCGCGTCGT+TGG 0.508596 1.4:-64699896 MS.gene005054:CDS
TCGAGGGATGATGAGACTGC+AGG 0.509046 1.4:-64699253 MS.gene005054:CDS
AGCAAAGCCAAATAGATAGT+AGG 0.509496 1.4:+64700335 None:intergenic
GACGTGTGTAATGGTTTACT+TGG 0.510713 1.4:-64699649 MS.gene005054:CDS
CCACCCATCAACAATCCATA+TGG 0.510810 1.4:+64699391 None:intergenic
TGGCACCGACGTATCGTGTT+CGG 0.511058 1.4:+64699102 None:intergenic
GAGGCCATATGGATTGTTGA+TGG 0.511702 1.4:-64699395 MS.gene005054:CDS
TACGGGATTGTTTGCAAAGG+GGG 0.512801 1.4:-64699446 MS.gene005054:CDS
TATGGGATAGGGAGGCCATA+TGG 0.515597 1.4:-64699406 MS.gene005054:CDS
AACGGAGCCTGCGCAGAGCA+TGG 0.515746 1.4:+64700422 None:intergenic
CAGCTTCTTTCTCTACCAAT+GGG 0.516999 1.4:-64700229 MS.gene005054:CDS
AACTGCAGGTTGTTCTGTTG+TGG 0.517299 1.4:-64699611 MS.gene005054:CDS
AATTAGGGTTTATGATGGGT+AGG 0.517824 1.4:-64699159 MS.gene005054:CDS
ATGGAAATATGAGTAACAAA+AGG 0.518100 1.4:-64699795 MS.gene005054:CDS
GGCCGGTCTGTTGCATTGAA+AGG 0.519192 1.4:-64699913 MS.gene005054:CDS
GCGGCCGATGAAGCCGTTGG+AGG 0.520644 1.4:+64700296 None:intergenic
CGTATCGTGTTCGGTGGCAG+AGG 0.523564 1.4:+64699111 None:intergenic
CGGCCGATGAAGCCGTTGGA+GGG 0.527370 1.4:+64700297 None:intergenic
AATGTCCTCGACGCTGCAGC+CGG 0.530902 1.4:-64700366 MS.gene005054:CDS
TGGTATAGCAGGGTTATGGG+GGG 0.532932 1.4:-64699977 MS.gene005054:CDS
GGTGTCACAACAACACTGGC+TGG 0.534256 1.4:-64699736 MS.gene005054:CDS
CCCAAATAAAACATCACCAT+TGG 0.534895 1.4:+64700047 None:intergenic
GCGCAGTTACACGGAGGGTG+TGG 0.537438 1.4:-64699487 MS.gene005054:CDS
CGGTTCAGGTGTGGTTCACA+TGG 0.537956 1.4:-64700004 MS.gene005054:CDS
GAGGGAGACACACTCATGGC+CGG 0.540366 1.4:+64699130 None:intergenic
GCCTTTGGAGCACCCTCCAA+CGG 0.540428 1.4:-64700309 MS.gene005054:CDS
GCCAGCCCAACGCGAACCAA+TGG 0.540771 1.4:-64700063 MS.gene005054:CDS
ATAGGGCGGTTCGACCGGAC+AGG 0.541559 1.4:-64699934 MS.gene005054:CDS
GGCGGTTCGACCGGACAGGC+CGG 0.542744 1.4:-64699930 MS.gene005054:CDS
AACGTCATTGACGTGTGTAA+TGG 0.544203 1.4:-64699658 MS.gene005054:CDS
GGTTGGTACGGGTTCAACCC+CGG 0.549923 1.4:-64699844 MS.gene005054:CDS
CTGTAGTCACCCGAAGGTGA+AGG 0.551464 1.4:+64700249 None:intergenic
TATGATGGGTAGGATTGAGC+CGG 0.553940 1.4:-64699149 MS.gene005054:CDS
GTCCTCGACGCTGCAGCCGG+TGG 0.554837 1.4:-64700363 MS.gene005054:CDS
AGGACATAGCGCGTCGTTGG+TGG 0.555347 1.4:-64699893 MS.gene005054:CDS
TTCAGGTGTGGTTCACATGG+TGG 0.556560 1.4:-64700001 MS.gene005054:CDS
AATGGAGCCACTAGTGATAC+CGG 0.557459 1.4:+64700188 None:intergenic
GTGTGTAATGGTTTACTTGG+CGG 0.557557 1.4:-64699646 MS.gene005054:CDS
GCATAGGTAGTCTGCAACGG+CGG 0.557659 1.4:+64700554 None:intergenic
GGATGATGAGACTGCAGGGA+TGG 0.557751 1.4:-64699248 MS.gene005054:CDS
GTTTACGGGATTGTTTGCAA+AGG 0.562175 1.4:-64699449 MS.gene005054:CDS
AAATTGAGTTCTCTCTGCAA+TGG 0.563390 1.4:+64700170 None:intergenic
ACCGGCAGCAGCGATGGCGA+AGG 0.564745 1.4:+64700206 None:intergenic
ATAAGCTGAGAAGAGAAGGT+AGG 0.565446 1.4:+64700473 None:intergenic
TGAAATTGTTGAGGATATCG+AGG 0.567161 1.4:-64699270 MS.gene005054:CDS
GTGGCGGCCGATGAAGCCGT+TGG 0.567324 1.4:+64700293 None:intergenic
CCATATGGATTGTTGATGGG+TGG 0.567763 1.4:-64699391 MS.gene005054:CDS
TTATTCAGCCCATAAAATAA+CGG 0.567889 1.4:+64699295 None:intergenic
AACGGTTATTAGTTGGACAC+TGG 0.568051 1.4:-64699681 MS.gene005054:CDS
AGGCCATATGGATTGTTGAT+GGG 0.568103 1.4:-64699394 MS.gene005054:CDS
CAAACCCAATGCGAAACGAT+GGG 0.569510 1.4:+64700102 None:intergenic
GTCCTTTCAATGCAACAGAC+CGG 0.570037 1.4:+64699911 None:intergenic
TGGTGTTGAATTGGGTGCAT+AGG 0.570282 1.4:+64700538 None:intergenic
TTAGTCTTTGCCATGCAGCT+CGG 0.570620 1.4:-64700450 MS.gene005054:CDS
CATGGCGAAACCGAGCTGCA+TGG 0.571462 1.4:+64700440 None:intergenic
AGTGATACCGGCAGCAGCGA+TGG 0.573055 1.4:+64700200 None:intergenic
GGCTGCAGCGTCGAGGACAT+TGG 0.575668 1.4:+64700368 None:intergenic
TTGTTCTGTTGTGGAACCAT+GGG 0.576456 1.4:-64699602 MS.gene005054:CDS
CCAAACCCAATGCGAAACGA+TGG 0.576636 1.4:+64700101 None:intergenic
TGACTTTGCCGGTTCAGGTG+TGG 0.579151 1.4:-64700013 MS.gene005054:CDS
TTAGAGGCTGCGCAGTTACA+CGG 0.582164 1.4:-64699496 MS.gene005054:CDS
TGTAGTCACCCGAAGGTGAA+GGG 0.585601 1.4:+64700250 None:intergenic
CATGGGCCGCGATTGTGTGT+GGG 0.586850 1.4:-64699585 MS.gene005054:CDS
CGAGGGATGATGAGACTGCA+GGG 0.589259 1.4:-64699252 MS.gene005054:CDS
GTAGGTGTTGTCTATTGCAT+AGG 0.590077 1.4:+64700491 None:intergenic
TGAATAAGATGAAATTGTTG+AGG 0.592343 1.4:-64699279 MS.gene005054:CDS
AAATAACGGCACCATCGTGA+CGG 0.592498 1.4:+64699309 None:intergenic
AGGAAATTAGGGTTTATGAT+GGG 0.592652 1.4:-64699163 MS.gene005054:CDS
AACAAACCCACACACAATCG+CGG 0.593035 1.4:+64699579 None:intergenic
GGTGTTGTCTATTGCATAGG+TGG 0.593690 1.4:+64700494 None:intergenic
TTGCGTTTGCGGTGGTGGTG+AGG 0.596669 1.4:+64700577 None:intergenic
TGCGGTGGTGGTGAGGAGTG+GGG 0.601876 1.4:+64700584 None:intergenic
GGCAGAGGGAGACACACTCA+TGG 0.604115 1.4:+64699126 None:intergenic
GCTGCTGCCGGTATCACTAG+TGG 0.604144 1.4:-64700195 MS.gene005054:CDS
CCACACACAATCGCGGCCCA+TGG 0.607906 1.4:+64699586 None:intergenic
AGCCAAATAGATAGTAGGAG+AGG 0.608112 1.4:+64700340 None:intergenic
GGTGTGGTTCACATGGTGGG+TGG 0.612109 1.4:-64699997 MS.gene005054:CDS
ATGAGATTTATGGGATAGGG+AGG 0.617665 1.4:-64699414 MS.gene005054:CDS
TGTGTGGGTTTGTTGCGGCG+TGG 0.623345 1.4:-64699570 MS.gene005054:CDS
TGGACTTGACTAGACATGGT+GGG 0.625359 1.4:-64699228 MS.gene005054:CDS
GATTGTGTGTGGGTTTGTTG+CGG 0.627273 1.4:-64699575 MS.gene005054:CDS
GGTGCATAGGTAGTCTGCAA+CGG 0.633576 1.4:+64700551 None:intergenic
GAAATTGTTGAGGATATCGA+GGG 0.633706 1.4:-64699269 MS.gene005054:CDS
AACAGGTGTCACAACAACAC+TGG 0.637368 1.4:-64699740 MS.gene005054:CDS
CACCGACGTATCGTGTTCGG+TGG 0.638372 1.4:+64699105 None:intergenic
GTATCGTGTTCGGTGGCAGA+GGG 0.638569 1.4:+64699112 None:intergenic
AACGGCGGTTGCGTTTGCGG+TGG 0.642746 1.4:+64700569 None:intergenic
TGCTTATGCGTATCATGACG+AGG 0.643185 1.4:-64699203 MS.gene005054:CDS
GGCCACCGGCTGCAGCGTCG+AGG 0.648352 1.4:+64700361 None:intergenic
TAGATAGTAGGAGAGGCCAC+CGG 0.654386 1.4:+64700347 None:intergenic
ACATGGTGGGTGGTATAGCA+GGG 0.662991 1.4:-64699987 MS.gene005054:CDS
AAGTGATGATATCACACTGA+AGG 0.666643 1.4:+64699070 None:intergenic
AAGAAGCTGTAGTCACCCGA+AGG 0.668205 1.4:+64700243 None:intergenic
AGGCTGCGCAGTTACACGGA+GGG 0.669758 1.4:-64699492 MS.gene005054:CDS
ACCGGCAAAGTCAATAACAC+CGG 0.670560 1.4:+64700023 None:intergenic
AAACCCAATGCGAAACGATG+GGG 0.679819 1.4:+64700103 None:intergenic
TAGAAGGTCCTAGAATAGGG+CGG 0.681945 1.4:-64699948 MS.gene005054:CDS
TGGGTGGGTTACCGTCACGA+TGG 0.684596 1.4:-64699320 MS.gene005054:CDS
GGGATGGACTTGACTAGACA+TGG 0.695287 1.4:-64699232 MS.gene005054:CDS
ATGGACTTGACTAGACATGG+TGG 0.698702 1.4:-64699229 MS.gene005054:CDS
TGCCACCGAACACGATACGT+CGG 0.704524 1.4:-64699107 MS.gene005054:CDS
TTACGGGATTGTTTGCAAAG+GGG 0.721445 1.4:-64699447 MS.gene005054:CDS
GAGGCTGCGCAGTTACACGG+AGG 0.735378 1.4:-64699493 MS.gene005054:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTCTTCTTTTTTAAC+CGG - chr1.4:64699564-64699583 MS.gene005054:CDS 15.0%
!! AAAAGAAGAATATATGAGAT+AGG + chr1.4:64699559-64699578 None:intergenic 20.0%
!! AGTAACAAAAGGAATTATTA+TGG - chr1.4:64699915-64699934 MS.gene005054:CDS 20.0%
!! TGCAATTATTAAAAATGAAC+CGG + chr1.4:64699877-64699896 None:intergenic 20.0%
!! TTAATAATTGCAAAAAGCTA+TGG - chr1.4:64699885-64699904 MS.gene005054:CDS 20.0%
! AAAGGAATTATTATGGTCAA+TGG - chr1.4:64699922-64699941 MS.gene005054:CDS 25.0%
! ATGGAAATATGAGTAACAAA+AGG - chr1.4:64699904-64699923 MS.gene005054:CDS 25.0%
! CAATTATTAAAAATGAACCG+GGG + chr1.4:64699875-64699894 None:intergenic 25.0%
! GCAATTATTAAAAATGAACC+GGG + chr1.4:64699876-64699895 None:intergenic 25.0%
! TGAATAAGATGAAATTGTTG+AGG - chr1.4:64700420-64700439 MS.gene005054:CDS 25.0%
! TTATTCAGCCCATAAAATAA+CGG + chr1.4:64700407-64700426 None:intergenic 25.0%
! TTTAGTAAACGGTTATTAGT+TGG - chr1.4:64700011-64700030 MS.gene005054:CDS 25.0%
! TTTGATTGGGCTTAATAAAT+TGG - chr1.4:64700154-64700173 MS.gene005054:CDS 25.0%
!! AGTATGTTGATGAGATTTAT+GGG - chr1.4:64700276-64700295 MS.gene005054:CDS 25.0%
!! TGACAACTTTGTTTAGTAAA+CGG - chr1.4:64700000-64700019 MS.gene005054:CDS 25.0%
!!! CTTTTTTATTATGGTTTGGT+TGG - chr1.4:64699838-64699857 MS.gene005054:CDS 25.0%
!!! GGTTCTTTTTTATTATGGTT+TGG - chr1.4:64699834-64699853 MS.gene005054:CDS 25.0%
!!! TGTTGGGTTCTTTTTTATTA+TGG - chr1.4:64699829-64699848 MS.gene005054:CDS 25.0%
ACGAGTCTATTAGGAAATTA+GGG - chr1.4:64700525-64700544 MS.gene005054:CDS 30.0%
AGGAAATTAGGGTTTATGAT+GGG - chr1.4:64700536-64700555 MS.gene005054:CDS 30.0%
GCTTAATAAATTGGCGATTA+AGG - chr1.4:64700163-64700182 MS.gene005054:CDS 30.0%
TAGGAAATTAGGGTTTATGA+TGG - chr1.4:64700535-64700554 MS.gene005054:CDS 30.0%
TTATAGAAGGTCCTAGAATA+GGG - chr1.4:64699748-64699767 MS.gene005054:CDS 30.0%
TTGATGAGATTTATGGGATA+GGG - chr1.4:64700282-64700301 MS.gene005054:CDS 30.0%
TTTATAGAAGGTCCTAGAAT+AGG - chr1.4:64699747-64699766 MS.gene005054:CDS 30.0%
! ATTTGAGATGGTGTTGAATT+GGG + chr1.4:64699172-64699191 None:intergenic 30.0%
! GAGTATGTTGATGAGATTTA+TGG - chr1.4:64700275-64700294 MS.gene005054:CDS 30.0%
! TATTTGAGATGGTGTTGAAT+TGG + chr1.4:64699173-64699192 None:intergenic 30.0%
!! ACCAATGGTGATGTTTTATT+TGG - chr1.4:64699651-64699670 MS.gene005054:CDS 30.0%
!! TTATTATGGTTTGGTTGGTA+CGG - chr1.4:64699843-64699862 MS.gene005054:CDS 30.0%
!!! CCAATGGTGATGTTTTATTT+GGG - chr1.4:64699652-64699671 MS.gene005054:CDS 30.0%
AAATTGAGTTCTCTCTGCAA+TGG + chr1.4:64699532-64699551 None:intergenic 35.0%
AGCAAAGCCAAATAGATAGT+AGG + chr1.4:64699367-64699386 None:intergenic 35.0%
CCCAAATAAAACATCACCAT+TGG + chr1.4:64699655-64699674 None:intergenic 35.0%
CTAAATAAGCTGAGAAGAGA+AGG + chr1.4:64699233-64699252 None:intergenic 35.0%
GAAATTGTTGAGGATATCGA+GGG - chr1.4:64700430-64700449 MS.gene005054:CDS 35.0%
GAAGTATGATGATCCATTAG+AGG - chr1.4:64700187-64700206 MS.gene005054:CDS 35.0%
GACGAGTCTATTAGGAAATT+AGG - chr1.4:64700524-64700543 MS.gene005054:CDS 35.0%
TGAAATTGTTGAGGATATCG+AGG - chr1.4:64700429-64700448 MS.gene005054:CDS 35.0%
TTTACGGGATTGTTTGCAAA+GGG - chr1.4:64700251-64700270 MS.gene005054:CDS 35.0%
! CATGATGTTCATGGTGTTTT+TGG + chr1.4:64699307-64699326 None:intergenic 35.0%
! GTTGATGAGATTTATGGGAT+AGG - chr1.4:64700281-64700300 MS.gene005054:CDS 35.0%
!! AATTAGGGTTTATGATGGGT+AGG - chr1.4:64700540-64700559 MS.gene005054:CDS 35.0%
!! TATTATGGTTTGGTTGGTAC+GGG - chr1.4:64699844-64699863 MS.gene005054:CDS 35.0%
AACGATGGGGTAAACAAAAC+CGG + chr1.4:64699586-64699605 None:intergenic 40.0%
AACGGTTATTAGTTGGACAC+TGG - chr1.4:64700018-64700037 MS.gene005054:CDS 40.0%
AACGTCATTGACGTGTGTAA+TGG - chr1.4:64700041-64700060 MS.gene005054:CDS 40.0%
AATCCCTTAGACCGAAAAAG+TGG + chr1.4:64699428-64699447 None:intergenic 40.0%
ACAGCTTCTTTCTCTACCAA+TGG - chr1.4:64699469-64699488 MS.gene005054:CDS 40.0%
AGCCAAATAGATAGTAGGAG+AGG + chr1.4:64699362-64699381 None:intergenic 40.0%
AGGAAGATGACGAGTCTATT+AGG - chr1.4:64700516-64700535 MS.gene005054:CDS 40.0%
ATAAGCTGAGAAGAGAAGGT+AGG + chr1.4:64699229-64699248 None:intergenic 40.0%
ATGAGATTTATGGGATAGGG+AGG - chr1.4:64700285-64700304 MS.gene005054:CDS 40.0%
ATTGGTGAGCATGATGTTCA+TGG + chr1.4:64699316-64699335 None:intergenic 40.0%
CAGCTTCTTTCTCTACCAAT+GGG - chr1.4:64699470-64699489 MS.gene005054:CDS 40.0%
GACGTGTGTAATGGTTTACT+TGG - chr1.4:64700050-64700069 MS.gene005054:CDS 40.0%
GTCGCTGAGTTTATTTGAGA+TGG + chr1.4:64699184-64699203 None:intergenic 40.0%
GTGTGTAATGGTTTACTTGG+CGG - chr1.4:64700053-64700072 MS.gene005054:CDS 40.0%
GTTTACGGGATTGTTTGCAA+AGG - chr1.4:64700250-64700269 MS.gene005054:CDS 40.0%
TGCAGAGAGAACTCAATTTG+TGG - chr1.4:64699533-64699552 MS.gene005054:CDS 40.0%
TTACGGGATTGTTTGCAAAG+GGG - chr1.4:64700252-64700271 MS.gene005054:CDS 40.0%
TTGTTCTGTTGTGGAACCAT+GGG - chr1.4:64700097-64700116 MS.gene005054:CDS 40.0%
! AGGCCATATGGATTGTTGAT+GGG - chr1.4:64700305-64700324 MS.gene005054:CDS 40.0%
! GTAGGTGTTGTCTATTGCAT+AGG + chr1.4:64699211-64699230 None:intergenic 40.0%
! TATGGTCAATGGAGTGCTAT+TGG - chr1.4:64699933-64699952 MS.gene005054:CDS 40.0%
!! TTATGGGGGGCATTTATAGA+AGG - chr1.4:64699735-64699754 MS.gene005054:CDS 40.0%
!! TTGAGGTGCTGGTTATTTGT+GGG - chr1.4:64700360-64700379 MS.gene005054:CDS 40.0%
!!! ACGATGGTGCCGTTATTTTA+TGG - chr1.4:64700395-64700414 MS.gene005054:CDS 40.0%
!!! CGATGGTGCCGTTATTTTAT+GGG - chr1.4:64700396-64700415 MS.gene005054:CDS 40.0%
!!! GGTGATGTTTTATTTGGGTC+CGG - chr1.4:64699657-64699676 MS.gene005054:CDS 40.0%
AAACCCAATGCGAAACGATG+GGG + chr1.4:64699599-64699618 None:intergenic 45.0%
AAATAACGGCACCATCGTGA+CGG + chr1.4:64700393-64700412 None:intergenic 45.0%
AACAAACCCACACACAATCG+CGG + chr1.4:64700123-64700142 None:intergenic 45.0%
AACTGCAGGTTGTTCTGTTG+TGG - chr1.4:64700088-64700107 MS.gene005054:CDS 45.0%
AAGGGATTACCCTTCACCTT+CGG - chr1.4:64699440-64699459 MS.gene005054:CDS 45.0%
AATGGAGCCACTAGTGATAC+CGG + chr1.4:64699514-64699533 None:intergenic 45.0%
ACCGGCAAAGTCAATAACAC+CGG + chr1.4:64699679-64699698 None:intergenic 45.0%
ATGGACTTGACTAGACATGG+TGG - chr1.4:64700470-64700489 MS.gene005054:CDS 45.0%
CAAACCCAATGCGAAACGAT+GGG + chr1.4:64699600-64699619 None:intergenic 45.0%
CCACCCATCAACAATCCATA+TGG + chr1.4:64700311-64700330 None:intergenic 45.0%
GGCCTCTCCTACTATCTATT+TGG - chr1.4:64699357-64699376 MS.gene005054:CDS 45.0%
GTCCTTTCAATGCAACAGAC+CGG + chr1.4:64699791-64699810 None:intergenic 45.0%
GTTGTTCTGTTGTGGAACCA+TGG - chr1.4:64700096-64700115 MS.gene005054:CDS 45.0%
TACGGGATTGTTTGCAAAGG+GGG - chr1.4:64700253-64700272 MS.gene005054:CDS 45.0%
TAGAAGGTCCTAGAATAGGG+CGG - chr1.4:64699751-64699770 MS.gene005054:CDS 45.0%
TGCTTATGCGTATCATGACG+AGG - chr1.4:64700496-64700515 MS.gene005054:CDS 45.0%
TGGACTTGACTAGACATGGT+GGG - chr1.4:64700471-64700490 MS.gene005054:CDS 45.0%
TTACCCCATCGTTTCGCATT+GGG - chr1.4:64699593-64699612 MS.gene005054:CDS 45.0%
TTTACCCCATCGTTTCGCAT+TGG - chr1.4:64699592-64699611 MS.gene005054:CDS 45.0%
! AACAGGTGTCACAACAACAC+TGG - chr1.4:64699959-64699978 MS.gene005054:CDS 45.0%
! CCATATGGATTGTTGATGGG+TGG - chr1.4:64700308-64700327 MS.gene005054:CDS 45.0%
! GAGGCCATATGGATTGTTGA+TGG - chr1.4:64700304-64700323 MS.gene005054:CDS 45.0%
! GGTGTTGTCTATTGCATAGG+TGG + chr1.4:64699208-64699227 None:intergenic 45.0%
! GGTTTTGCTGCTATAACTGC+AGG - chr1.4:64700074-64700093 MS.gene005054:CDS 45.0%
! TATGGATTGTTGATGGGTGG+TGG - chr1.4:64700311-64700330 MS.gene005054:CDS 45.0%
! TGGAGTGCTATTGGAAGAAC+AGG - chr1.4:64699942-64699961 MS.gene005054:CDS 45.0%
! TGGTGTTGAATTGGGTGCAT+AGG + chr1.4:64699164-64699183 None:intergenic 45.0%
! TTAGTCTTTGCCATGCAGCT+CGG - chr1.4:64699249-64699268 MS.gene005054:CDS 45.0%
!! GATTGTGTGTGGGTTTGTTG+CGG - chr1.4:64700124-64700143 MS.gene005054:CDS 45.0%
!! GTTATTGACTTTGCCGGTTC+AGG - chr1.4:64699681-64699700 MS.gene005054:CDS 45.0%
!! GTTGAGGTGCTGGTTATTTG+TGG - chr1.4:64700359-64700378 MS.gene005054:CDS 45.0%
!! TATGATGGGTAGGATTGAGC+CGG - chr1.4:64700550-64700569 MS.gene005054:CDS 45.0%
!! TCCGGTGTTATTGACTTTGC+CGG - chr1.4:64699675-64699694 MS.gene005054:CDS 45.0%
!! TTTGGCTTTGCTTTCGCCTT+TGG - chr1.4:64699375-64699394 MS.gene005054:CDS 45.0%
!!! CATGGTGTTTTTGGCTCGAA+CGG + chr1.4:64699298-64699317 None:intergenic 45.0%
AAGAAGCTGTAGTCACCCGA+AGG + chr1.4:64699459-64699478 None:intergenic 50.0%
AGGGATTACCCTTCACCTTC+GGG - chr1.4:64699441-64699460 MS.gene005054:CDS 50.0%
CATGTGAACCACACCTGAAC+CGG + chr1.4:64699697-64699716 None:intergenic 50.0%
CCAAACCCAATGCGAAACGA+TGG + chr1.4:64699601-64699620 None:intergenic 50.0%
CCATCGTTTCGCATTGGGTT+TGG - chr1.4:64699598-64699617 MS.gene005054:CDS 50.0%
CCCTTAGACCGAAAAAGTGG+CGG + chr1.4:64699425-64699444 None:intergenic 50.0%
GGGTGGTATAGCAGGGTTAT+GGG - chr1.4:64699719-64699738 MS.gene005054:CDS 50.0%
GGTGCATAGGTAGTCTGCAA+CGG + chr1.4:64699151-64699170 None:intergenic 50.0%
GGTGGTATAGCAGGGTTATG+GGG - chr1.4:64699720-64699739 MS.gene005054:CDS 50.0%
GTGGTATAGCAGGGTTATGG+GGG - chr1.4:64699721-64699740 MS.gene005054:CDS 50.0%
TAGATAGTAGGAGAGGCCAC+CGG + chr1.4:64699355-64699374 None:intergenic 50.0%
TATGGGATAGGGAGGCCATA+TGG - chr1.4:64700293-64700312 MS.gene005054:CDS 50.0%
TCAGGTGTGGTTCACATGGT+GGG - chr1.4:64699699-64699718 MS.gene005054:CDS 50.0%
TGGGTGGTATAGCAGGGTTA+TGG - chr1.4:64699718-64699737 MS.gene005054:CDS 50.0%
TGGTATAGCAGGGTTATGGG+GGG - chr1.4:64699722-64699741 MS.gene005054:CDS 50.0%
TGTAACTGCGCAGCCTCTAA+TGG + chr1.4:64700203-64700222 None:intergenic 50.0%
TGTAGTCACCCGAAGGTGAA+GGG + chr1.4:64699452-64699471 None:intergenic 50.0%
TTAGAGGCTGCGCAGTTACA+CGG - chr1.4:64700203-64700222 MS.gene005054:CDS 50.0%
TTCAGGTGTGGTTCACATGG+TGG - chr1.4:64699698-64699717 MS.gene005054:CDS 50.0%
! CACACTGAAGGTGCACTGAT+TGG + chr1.4:64700620-64700639 None:intergenic 50.0%
! GGGATGGACTTGACTAGACA+TGG - chr1.4:64700467-64700486 MS.gene005054:CDS 50.0%
!! ACATCACCATTGGTTCGCGT+TGG + chr1.4:64699645-64699664 None:intergenic 50.0%
!! ACATGGTGGGTGGTATAGCA+GGG - chr1.4:64699712-64699731 MS.gene005054:CDS 50.0%
!! AGGTGCTGGTTATTTGTGGG+TGG - chr1.4:64700363-64700382 MS.gene005054:CDS 50.0%
!! CATCACCATTGGTTCGCGTT+GGG + chr1.4:64699644-64699663 None:intergenic 50.0%
!! GATTGTTGATGGGTGGTGGA+GGG - chr1.4:64700315-64700334 MS.gene005054:CDS 50.0%
!! GGTGCTGGTTATTTGTGGGT+GGG - chr1.4:64700364-64700383 MS.gene005054:CDS 50.0%
!!! CCGCCACTTTTTCGGTCTAA+GGG - chr1.4:64699422-64699441 MS.gene005054:CDS 50.0%
!!! TTCATCGGCCGCCACTTTTT+CGG - chr1.4:64699414-64699433 MS.gene005054:CDS 50.0%
!!! TTGCGGCGTGGGTTTTGATT+GGG - chr1.4:64700141-64700160 MS.gene005054:CDS 50.0%
CGAGGGATGATGAGACTGCA+GGG - chr1.4:64700447-64700466 MS.gene005054:CDS 55.0%
CGGTTCAGGTGTGGTTCACA+TGG - chr1.4:64699695-64699714 MS.gene005054:CDS 55.0%
CTAGAATAGGGCGGTTCGAC+CGG - chr1.4:64699760-64699779 MS.gene005054:CDS 55.0%
CTGTAGTCACCCGAAGGTGA+AGG + chr1.4:64699453-64699472 None:intergenic 55.0%
GAAAGGACATAGCGCGTCGT+TGG - chr1.4:64699803-64699822 MS.gene005054:CDS 55.0%
GCATAGGTAGTCTGCAACGG+CGG + chr1.4:64699148-64699167 None:intergenic 55.0%
GGATGATGAGACTGCAGGGA+TGG - chr1.4:64700451-64700470 MS.gene005054:CDS 55.0%
GGCCGGTCTGTTGCATTGAA+AGG - chr1.4:64699786-64699805 MS.gene005054:CDS 55.0%
TCGAGGGATGATGAGACTGC+AGG - chr1.4:64700446-64700465 MS.gene005054:CDS 55.0%
TGCCACCGAACACGATACGT+CGG - chr1.4:64700592-64700611 MS.gene005054:CDS 55.0%
TGGTGGAGGGAGGTTGTTTG+CGG - chr1.4:64700328-64700347 MS.gene005054:CDS 55.0%
! CATTGGGTTTGGTCTGCCGA+TGG - chr1.4:64699609-64699628 MS.gene005054:CDS 55.0%
! GGATTGTTGATGGGTGGTGG+AGG - chr1.4:64700314-64700333 MS.gene005054:CDS 55.0%
! GGTGTCACAACAACACTGGC+TGG - chr1.4:64699963-64699982 MS.gene005054:CDS 55.0%
! GGTTTGGTCTGCCGATGGTT+GGG - chr1.4:64699614-64699633 MS.gene005054:CDS 55.0%
! GTATCGTGTTCGGTGGCAGA+GGG + chr1.4:64700590-64700609 None:intergenic 55.0%
!! CACATGGTGGGTGGTATAGC+AGG - chr1.4:64699711-64699730 MS.gene005054:CDS 55.0%
!! CGCATGGGGGGTGTTGTTTA+CGG - chr1.4:64700235-64700254 MS.gene005054:CDS 55.0%
!! GCATGGGGGGTGTTGTTTAC+GGG - chr1.4:64700236-64700255 MS.gene005054:CDS 55.0%
!! GTTGCGGCGTGGGTTTTGAT+TGG - chr1.4:64700140-64700159 MS.gene005054:CDS 55.0%
!! TGACTTTGCCGGTTCAGGTG+TGG - chr1.4:64699686-64699705 MS.gene005054:CDS 55.0%
!! TGGCACCGACGTATCGTGTT+CGG + chr1.4:64700600-64700619 None:intergenic 55.0%
!!! GCCGCCACTTTTTCGGTCTA+AGG - chr1.4:64699421-64699440 MS.gene005054:CDS 55.0%
AATGTCCTCGACGCTGCAGC+CGG - chr1.4:64699333-64699352 MS.gene005054:CDS 60.0%
AGGACATAGCGCGTCGTTGG+TGG - chr1.4:64699806-64699825 MS.gene005054:CDS 60.0%
AGGCTGCGCAGTTACACGGA+GGG - chr1.4:64700207-64700226 MS.gene005054:CDS 60.0%
AGTGATACCGGCAGCAGCGA+TGG + chr1.4:64699502-64699521 None:intergenic 60.0%
ATGCAACAGACCGGCCTGTC+CGG + chr1.4:64699782-64699801 None:intergenic 60.0%
CACCGACGTATCGTGTTCGG+TGG + chr1.4:64700597-64700616 None:intergenic 60.0%
CATGGCGAAACCGAGCTGCA+TGG + chr1.4:64699262-64699281 None:intergenic 60.0%
CATGGGCCGCGATTGTGTGT+GGG - chr1.4:64700114-64700133 MS.gene005054:CDS 60.0%
CGGTCGAACCGCCCTATTCT+AGG + chr1.4:64699762-64699781 None:intergenic 60.0%
GAGGGAGACACACTCATGGC+CGG + chr1.4:64700572-64700591 None:intergenic 60.0%
GCACCCTCCAACGGCTTCAT+CGG - chr1.4:64699399-64699418 MS.gene005054:CDS 60.0%
GCTGCTGCCGGTATCACTAG+TGG - chr1.4:64699504-64699523 MS.gene005054:CDS 60.0%
GGCAGAGGGAGACACACTCA+TGG + chr1.4:64700576-64700595 None:intergenic 60.0%
TGCAACGGCGGTTGCGTTTG+CGG + chr1.4:64699136-64699155 None:intergenic 60.0%
! CGTATCGTGTTCGGTGGCAG+AGG + chr1.4:64700591-64700610 None:intergenic 60.0%
! GGGTTTGGTCTGCCGATGGT+TGG - chr1.4:64699613-64699632 MS.gene005054:CDS 60.0%
! GGTGTGGTTCACATGGTGGG+TGG - chr1.4:64699702-64699721 MS.gene005054:CDS 60.0%
! GGTTGGTACGGGTTCAACCC+CGG - chr1.4:64699855-64699874 MS.gene005054:CDS 60.0%
! TTGCGGTGGTGGTGAGGAGT+GGG + chr1.4:64699119-64699138 None:intergenic 60.0%
! TTGCGTTTGCGGTGGTGGTG+AGG + chr1.4:64699125-64699144 None:intergenic 60.0%
! TTTGCGGTGGTGGTGAGGAG+TGG + chr1.4:64699120-64699139 None:intergenic 60.0%
!! ACCATTGGTTCGCGTTGGGC+TGG + chr1.4:64699640-64699659 None:intergenic 60.0%
!! AGCGCGTCGTTGGTGGTGTT+GGG - chr1.4:64699813-64699832 MS.gene005054:CDS 60.0%
!! GCCTTTGGAGCACCCTCCAA+CGG - chr1.4:64699390-64699409 MS.gene005054:CDS 60.0%
!! GTGTGGGTTTGTTGCGGCGT+GGG - chr1.4:64700130-64700149 MS.gene005054:CDS 60.0%
!! TAGCGCGTCGTTGGTGGTGT+TGG - chr1.4:64699812-64699831 MS.gene005054:CDS 60.0%
!! TGGGTGGGTTACCGTCACGA+TGG - chr1.4:64700379-64700398 MS.gene005054:CDS 60.0%
!! TGTGTGGGTTTGTTGCGGCG+TGG - chr1.4:64700129-64700148 MS.gene005054:CDS 60.0%
!! TGTTGATGGGTGGTGGAGGG+AGG - chr1.4:64700318-64700337 MS.gene005054:CDS 60.0%
AACGGAGCCTGCGCAGAGCA+TGG + chr1.4:64699280-64699299 None:intergenic 65.0%
AACGGCGGTTGCGTTTGCGG+TGG + chr1.4:64699133-64699152 None:intergenic 65.0%
AGGGAGGTTGTTTGCGGCGC+AGG - chr1.4:64700334-64700353 MS.gene005054:CDS 65.0%
ATAGGGCGGTTCGACCGGAC+AGG - chr1.4:64699765-64699784 MS.gene005054:CDS 65.0%
CAGCGATGGCGAAGGCCCAT+TGG + chr1.4:64699488-64699507 None:intergenic 65.0%
CCACACACAATCGCGGCCCA+TGG + chr1.4:64700116-64700135 None:intergenic 65.0%
CCATGGGCCGCGATTGTGTG+TGG - chr1.4:64700113-64700132 MS.gene005054:CDS 65.0%
CGGCCGATGAAGCCGTTGGA+GGG + chr1.4:64699405-64699424 None:intergenic 65.0%
GAGGAGTGGGGCTAGGTCTG+TGG + chr1.4:64699106-64699125 None:intergenic 65.0%
GAGGCTGCGCAGTTACACGG+AGG - chr1.4:64700206-64700225 MS.gene005054:CDS 65.0%
GAGGTTGTTTGCGGCGCAGG+TGG - chr1.4:64700337-64700356 MS.gene005054:CDS 65.0%
GCCAGCCCAACGCGAACCAA+TGG - chr1.4:64699636-64699655 MS.gene005054:CDS 65.0%
GCGCAGTTACACGGAGGGTG+TGG - chr1.4:64700212-64700231 MS.gene005054:CDS 65.0%
GGTTTCGCCATGCTCTGCGC+AGG - chr1.4:64699270-64699289 MS.gene005054:CDS 65.0%
GTTTGCGGCGCAGGTGGTTG+AGG - chr1.4:64700343-64700362 MS.gene005054:CDS 65.0%
! ACACGGAGGGTGTGGCGCAT+GGG - chr1.4:64700220-64700239 MS.gene005054:CDS 65.0%
! GGCTGCAGCGTCGAGGACAT+TGG + chr1.4:64699334-64699353 None:intergenic 65.0%
! TACACGGAGGGTGTGGCGCA+TGG - chr1.4:64700219-64700238 MS.gene005054:CDS 65.0%
! TGCGGTGGTGGTGAGGAGTG+GGG + chr1.4:64699118-64699137 None:intergenic 65.0%
! TGGTGGTGAGGAGTGGGGCT+AGG + chr1.4:64699113-64699132 None:intergenic 65.0%
!! CGTTGGGCTGGCCCAACCAT+CGG + chr1.4:64699628-64699647 None:intergenic 65.0%
!! GCCGTTGGAGGGTGCTCCAA+AGG + chr1.4:64699394-64699413 None:intergenic 65.0%
ACCGGCAGCAGCGATGGCGA+AGG + chr1.4:64699496-64699515 None:intergenic 70.0%
GCCTTCGCCATCGCTGCTGC+CGG - chr1.4:64699492-64699511 MS.gene005054:CDS 70.0%
GCGGCCGATGAAGCCGTTGG+AGG + chr1.4:64699406-64699425 None:intergenic 70.0%
GGCGCAGGTGGTTGAGGTGC+TGG - chr1.4:64700349-64700368 MS.gene005054:CDS 70.0%
GGCGGTTGCGTTTGCGGTGG+TGG + chr1.4:64699130-64699149 None:intergenic 70.0%
GTGGCGGCCGATGAAGCCGT+TGG + chr1.4:64699409-64699428 None:intergenic 70.0%
! ACGGAGGGTGTGGCGCATGG+GGG - chr1.4:64700222-64700241 MS.gene005054:CDS 70.0%
! CACGGAGGGTGTGGCGCATG+GGG - chr1.4:64700221-64700240 MS.gene005054:CDS 70.0%
GGCGGTTCGACCGGACAGGC+CGG - chr1.4:64699769-64699788 MS.gene005054:CDS 75.0%
GTCCTCGACGCTGCAGCCGG+TGG - chr1.4:64699336-64699355 MS.gene005054:CDS 75.0%
! CGGAGGGTGTGGCGCATGGG+GGG - chr1.4:64700223-64700242 MS.gene005054:CDS 75.0%
!! GGCCACCGGCTGCAGCGTCG+AGG + chr1.4:64699341-64699360 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 64699081 64700640 64699081 ID=MS.gene005054
chr1.4 mRNA 64699081 64700640 64699081 ID=MS.gene005054.t1;Parent=MS.gene005054
chr1.4 exon 64699081 64700640 64699081 ID=MS.gene005054.t1.exon1;Parent=MS.gene005054.t1
chr1.4 CDS 64699081 64700640 64699081 ID=cds.MS.gene005054.t1;Parent=MS.gene005054.t1
Gene Sequence

>MS.gene005054

ATGGCTTCTCTATCTTGCTCAGCCACAGACCTAGCCCCACTCCTCACCACCACCGCAAACGCAACCGCCGTTGCAGACTACCTATGCACCCAATTCAACACCATCTCAAATAAACTCAGCGACACCACCTATGCAATAGACAACACCTACCTTCTCTTCTCAGCTTATTTAGTCTTTGCCATGCAGCTCGGTTTCGCCATGCTCTGCGCAGGCTCCGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCAGCCGGTGGCCTCTCCTACTATCTATTTGGCTTTGCTTTCGCCTTTGGAGCACCCTCCAACGGCTTCATCGGCCGCCACTTTTTCGGTCTAAGGGATTACCCTTCACCTTCGGGTGACTACAGCTTCTTTCTCTACCAATGGGCCTTCGCCATCGCTGCTGCCGGTATCACTAGTGGCTCCATTGCAGAGAGAACTCAATTTGTGGCCTATCTCATATATTCTTCTTTTTTAACCGGTTTTGTTTACCCCATCGTTTCGCATTGGGTTTGGTCTGCCGATGGTTGGGCCAGCCCAACGCGAACCAATGGTGATGTTTTATTTGGGTCCGGTGTTATTGACTTTGCCGGTTCAGGTGTGGTTCACATGGTGGGTGGTATAGCAGGGTTATGGGGGGCATTTATAGAAGGTCCTAGAATAGGGCGGTTCGACCGGACAGGCCGGTCTGTTGCATTGAAAGGACATAGCGCGTCGTTGGTGGTGTTGGGTTCTTTTTTATTATGGTTTGGTTGGTACGGGTTCAACCCCGGTTCATTTTTAATAATTGCAAAAAGCTATGGAAATATGAGTAACAAAAGGAATTATTATGGTCAATGGAGTGCTATTGGAAGAACAGGTGTCACAACAACACTGGCTGGATGCACTGCAGCTTTGACAACTTTGTTTAGTAAACGGTTATTAGTTGGACACTGGAACGTCATTGACGTGTGTAATGGTTTACTTGGCGGTTTTGCTGCTATAACTGCAGGTTGTTCTGTTGTGGAACCATGGGCCGCGATTGTGTGTGGGTTTGTTGCGGCGTGGGTTTTGATTGGGCTTAATAAATTGGCGATTAAGGTGAAGTATGATGATCCATTAGAGGCTGCGCAGTTACACGGAGGGTGTGGCGCATGGGGGGTGTTGTTTACGGGATTGTTTGCAAAGGGGGAGTATGTTGATGAGATTTATGGGATAGGGAGGCCATATGGATTGTTGATGGGTGGTGGAGGGAGGTTGTTTGCGGCGCAGGTGGTTGAGGTGCTGGTTATTTGTGGGTGGGTTACCGTCACGATGGTGCCGTTATTTTATGGGCTGAATAAGATGAAATTGTTGAGGATATCGAGGGATGATGAGACTGCAGGGATGGACTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGACGAGGAAGATGACGAGTCTATTAGGAAATTAGGGTTTATGATGGGTAGGATTGAGCCGGCCATGAGTGTGTCTCCCTCTGCCACCGAACACGATACGTCGGTGCCAATCAGTGCACCTTCAGTGTGA
Protein sequence

>MS.gene005054.t1

MASLSCSATDLAPLLTTTANATAVADYLCTQFNTISNKLSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTNGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLIIAKSYGNMSNKRNYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGIGRPYGLLMGGGGRLFAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKLGFMMGRIEPAMSVSPSATEHDTSVPISAPSV