AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005052

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005052.t1 MTR_1g079760 97.303 519 14 0 1 519 1 519 0.0 1025
MS.gene005052.t1 MTR_1g045550 73.281 509 124 5 1 506 1 500 0.0 744
MS.gene005052.t1 MTR_7g098930 72.912 491 127 3 1 489 1 487 0.0 719
MS.gene005052.t1 MTR_7g113340 71.984 489 131 3 1 487 1 485 0.0 707
MS.gene005052.t1 MTR_3g463730 67.038 449 137 4 40 484 7 448 0.0 595
MS.gene005052.t1 MTR_7g115050 28.608 388 217 14 112 479 100 447 5.84e-26 111
MS.gene005052.t1 MTR_1g036410 25.107 466 282 15 47 484 24 450 7.52e-21 95.9
MS.gene005052.t1 MTR_8g074750 25.304 494 298 17 47 515 30 477 5.32e-20 93.2
MS.gene005052.t1 MTR_7g069640 26.526 475 282 14 47 487 22 463 5.63e-17 84.0
MS.gene005052.t1 MTR_4g017820 27.439 492 290 17 47 506 22 478 3.32e-16 81.6
MS.gene005052.t1 MTR_8g095040 24.947 473 290 12 47 487 29 468 1.39e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005052.t1 AT1G64780 77.148 512 106 6 2 506 4 511 0.0 782
MS.gene005052.t1 AT4G13510 74.074 513 119 7 4 514 1 501 0.0 756
MS.gene005052.t1 AT3G24300 73.123 506 119 4 3 506 4 494 0.0 742
MS.gene005052.t1 AT3G24290 74.948 483 112 4 3 483 4 479 0.0 724
MS.gene005052.t1 AT4G28700 72.189 507 129 6 2 501 3 504 0.0 702
MS.gene005052.t1 AT2G38290 26.078 464 288 13 47 488 20 450 3.42e-22 100
MS.gene005052.t1 AT2G38290 26.870 361 224 10 135 488 7 334 8.40e-20 91.7

Find 196 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTATGTTGATGAGATTTA+TGG 0.173966 1.4:+64595788 MS.gene005052:CDS
GACGAGTCTATTAGGAAATT+AGG 0.214176 1.4:+64596037 MS.gene005052:CDS
TTTGATTGGGCTTAATAAAT+TGG 0.218891 1.4:+64595667 MS.gene005052:CDS
GCTTAATAAATTGGCGATTA+AGG 0.220724 1.4:+64595676 MS.gene005052:CDS
GGCCTCTCCTACTATCTATT+TGG 0.247116 1.4:+64594870 MS.gene005052:CDS
TTTGGCTTTGCTTTCGCCTT+TGG 0.288902 1.4:+64594888 MS.gene005052:CDS
GTTATTGACTTTGCCGGTTC+AGG 0.294088 1.4:+64595194 MS.gene005052:CDS
GGGTGGTATAGCAGGGTTAT+GGG 0.312935 1.4:+64595232 MS.gene005052:CDS
CGGTCGAACCGCCCTATTCT+AGG 0.319056 1.4:-64595272 None:intergenic
TCCGGTGTTATTGACTTTGC+CGG 0.323221 1.4:+64595188 MS.gene005052:CDS
TATGGTCAATGGAGTGCTAT+TGG 0.333213 1.4:+64595446 MS.gene005052:CDS
AAGGGATTACCCTTCACCTT+CGG 0.337397 1.4:+64594953 MS.gene005052:CDS
AGGGAGGTTGTTTGCGGCGC+AGG 0.338172 1.4:+64595847 MS.gene005052:CDS
CACGGAGGGTGTGGCGCATG+GGG 0.339247 1.4:+64595734 MS.gene005052:CDS
CACATGGTGGGTGGTATAGC+AGG 0.340009 1.4:+64595224 MS.gene005052:CDS
AGGAAGATGACGAGTCTATT+AGG 0.343254 1.4:+64596029 MS.gene005052:CDS
ACGAGTCTATTAGGAAATTA+GGG 0.347347 1.4:+64596038 MS.gene005052:CDS
TGTAACTGCGCAGCCTCTAA+TGG 0.347657 1.4:-64595713 None:intergenic
AGGGATTACCCTTCACCTTC+GGG 0.348884 1.4:+64594954 MS.gene005052:CDS
CCATCGTTTCGCATTGGGTT+TGG 0.355981 1.4:+64595111 MS.gene005052:CDS
GTTGAGGTGCTGGTTATTTG+TGG 0.363153 1.4:+64595872 MS.gene005052:CDS
ACCATTGGTTCGCGTTGGGC+TGG 0.366798 1.4:-64595150 None:intergenic
TAGCGCGTCGTTGGTGGTGT+TGG 0.373610 1.4:+64595325 MS.gene005052:CDS
TTGCGGTGGTGGTGAGGAGT+GGG 0.375025 1.4:-64594629 None:intergenic
TGCAACGGCGGTTGCGTTTG+CGG 0.376248 1.4:-64594646 None:intergenic
TTGAGGTGCTGGTTATTTGT+GGG 0.377948 1.4:+64595873 MS.gene005052:CDS
AGTATGTTGATGAGATTTAT+GGG 0.378337 1.4:+64595789 MS.gene005052:CDS
GGCGGTTGCGTTTGCGGTGG+TGG 0.380612 1.4:-64594640 None:intergenic
TGGTGGTGAGGAGTGGGGCT+AGG 0.382794 1.4:-64594623 None:intergenic
ATTTGAGATGGTGTTGAATT+GGG 0.384973 1.4:-64594682 None:intergenic
TTACCCCATCGTTTCGCATT+GGG 0.385239 1.4:+64595106 MS.gene005052:CDS
ACACGGAGGGTGTGGCGCAT+GGG 0.388550 1.4:+64595733 MS.gene005052:CDS
TTTATAGAAGGTCCTAGAAT+AGG 0.393823 1.4:+64595260 MS.gene005052:CDS
TTTAGTAAACGGTTATTAGT+TGG 0.394285 1.4:+64595524 MS.gene005052:CDS
TACACGGAGGGTGTGGCGCA+TGG 0.398795 1.4:+64595732 MS.gene005052:CDS
TATTTGAGATGGTGTTGAAT+TGG 0.400022 1.4:-64594683 None:intergenic
TGACAACTTTGTTTAGTAAA+CGG 0.402627 1.4:+64595513 MS.gene005052:CDS
GGTTTGGTCTGCCGATGGTT+GGG 0.403385 1.4:+64595127 MS.gene005052:CDS
TGGGTGGTATAGCAGGGTTA+TGG 0.404483 1.4:+64595231 MS.gene005052:CDS
AGTAACAAAAGGAATTATTA+TGG 0.405005 1.4:+64595428 MS.gene005052:CDS
CATGTGAACCACACCTGAAC+CGG 0.411513 1.4:-64595207 None:intergenic
GGCGCAGGTGGTTGAGGTGC+TGG 0.412619 1.4:+64595862 MS.gene005052:CDS
TATTATGGTTTGGTTGGTAC+GGG 0.415535 1.4:+64595357 MS.gene005052:CDS
TTGATGAGATTTATGGGATA+GGG 0.415705 1.4:+64595795 MS.gene005052:CDS
CGGAGGGTGTGGCGCATGGG+GGG 0.418635 1.4:+64595736 MS.gene005052:CDS
CATCACCATTGGTTCGCGTT+GGG 0.420093 1.4:-64595154 None:intergenic
TTATTATGGTTTGGTTGGTA+CGG 0.423451 1.4:+64595356 MS.gene005052:CDS
AAAAGAAGAATATATGAGAT+AGG 0.425528 1.4:-64595069 None:intergenic
GTGGTATAGCAGGGTTATGG+GGG 0.427928 1.4:+64595234 MS.gene005052:CDS
ACGGAGGGTGTGGCGCATGG+GGG 0.428519 1.4:+64595735 MS.gene005052:CDS
ATGCAACAGACCGGCCTGTC+CGG 0.429149 1.4:-64595292 None:intergenic
AGCGCGTCGTTGGTGGTGTT+GGG 0.430363 1.4:+64595326 MS.gene005052:CDS
TGGAGTGCTATTGGAAGAAC+AGG 0.430989 1.4:+64595455 MS.gene005052:CDS
AAAGGAATTATTATGGTCAA+TGG 0.435762 1.4:+64595435 MS.gene005052:CDS
TGTTGATGGGTGGTGGAGGG+AGG 0.437827 1.4:+64595831 MS.gene005052:CDS
AGGTGCTGGTTATTTGTGGG+TGG 0.439612 1.4:+64595876 MS.gene005052:CDS
GGTGCTGGTTATTTGTGGGT+GGG 0.440274 1.4:+64595877 MS.gene005052:CDS
CAGCGATGGCGAAGGCCCAT+TGG 0.442094 1.4:-64594998 None:intergenic
GGATTGTTGATGGGTGGTGG+AGG 0.443117 1.4:+64595827 MS.gene005052:CDS
GTTGATGAGATTTATGGGAT+AGG 0.452271 1.4:+64595794 MS.gene005052:CDS
CACACTGAAGGTGCACTGAT+TGG 0.453333 1.4:-64596130 None:intergenic
TTTACCCCATCGTTTCGCAT+TGG 0.453403 1.4:+64595105 MS.gene005052:CDS
GGTTTCGCCATGCTCTGCGC+AGG 0.454596 1.4:+64594783 MS.gene005052:CDS
GGTGGTATAGCAGGGTTATG+GGG 0.457348 1.4:+64595233 MS.gene005052:CDS
TTATAGAAGGTCCTAGAATA+GGG 0.458590 1.4:+64595261 MS.gene005052:CDS
GCCTTCGCCATCGCTGCTGC+CGG 0.459814 1.4:+64595005 MS.gene005052:CDS
TGCAGAGAGAACTCAATTTG+TGG 0.460728 1.4:+64595046 MS.gene005052:CDS
GCACCCTCCAACGGCTTCAT+CGG 0.461259 1.4:+64594912 MS.gene005052:CDS
TAGGAAATTAGGGTTTATGA+TGG 0.464007 1.4:+64596048 MS.gene005052:CDS
GATTGTTGATGGGTGGTGGA+GGG 0.464090 1.4:+64595828 MS.gene005052:CDS
TATGGATTGTTGATGGGTGG+TGG 0.466509 1.4:+64595824 MS.gene005052:CDS
GGGTTTGGTCTGCCGATGGT+TGG 0.467295 1.4:+64595126 MS.gene005052:CDS
GTTTGCGGCGCAGGTGGTTG+AGG 0.472995 1.4:+64595856 MS.gene005052:CDS
TGGTGGAGGGAGGTTGTTTG+CGG 0.475634 1.4:+64595841 MS.gene005052:CDS
CTAAATAAGCTGAGAAGAGA+AGG 0.476158 1.4:-64594743 None:intergenic
GTGTGGGTTTGTTGCGGCGT+GGG 0.479169 1.4:+64595643 MS.gene005052:CDS
GTTGTTCTGTTGTGGAACCA+TGG 0.481083 1.4:+64595609 MS.gene005052:CDS
CTAGAATAGGGCGGTTCGAC+CGG 0.487260 1.4:+64595273 MS.gene005052:CDS
AACGATGGGGTAAACAAAAC+CGG 0.487884 1.4:-64595096 None:intergenic
CGTTGGGCTGGCCCAACCAT+CGG 0.489504 1.4:-64595138 None:intergenic
GTCGCTGAGTTTATTTGAGA+TGG 0.491035 1.4:-64594694 None:intergenic
TTTACGGGATTGTTTGCAAA+GGG 0.491383 1.4:+64595764 MS.gene005052:CDS
GAAGTATGATGATCCATTAG+AGG 0.491623 1.4:+64595700 MS.gene005052:CDS
GAGGAGTGGGGCTAGGTCTG+TGG 0.495166 1.4:-64594616 None:intergenic
TCAGGTGTGGTTCACATGGT+GGG 0.496702 1.4:+64595212 MS.gene005052:CDS
TTTGCGGTGGTGGTGAGGAG+TGG 0.496837 1.4:-64594630 None:intergenic
ACAGCTTCTTTCTCTACCAA+TGG 0.497981 1.4:+64594982 MS.gene005052:CDS
GCCGTTGGAGGGTGCTCCAA+AGG 0.499692 1.4:-64594904 None:intergenic
CCATGGGCCGCGATTGTGTG+TGG 0.504024 1.4:+64595626 MS.gene005052:CDS
ATTGGTGAGCATGATGTTCA+TGG 0.505916 1.4:-64594826 None:intergenic
CATTGGGTTTGGTCTGCCGA+TGG 0.506434 1.4:+64595122 MS.gene005052:CDS
ACATCACCATTGGTTCGCGT+TGG 0.507320 1.4:-64595155 None:intergenic
GAGGTTGTTTGCGGCGCAGG+TGG 0.508529 1.4:+64595850 MS.gene005052:CDS
GAAAGGACATAGCGCGTCGT+TGG 0.508596 1.4:+64595316 MS.gene005052:CDS
TCGAGGGATGATGAGACTGC+AGG 0.509046 1.4:+64595959 MS.gene005052:CDS
AGCAAAGCCAAATAGATAGT+AGG 0.509496 1.4:-64594877 None:intergenic
GACGTGTGTAATGGTTTACT+TGG 0.510713 1.4:+64595563 MS.gene005052:CDS
CCACCCATCAACAATCCATA+TGG 0.510810 1.4:-64595821 None:intergenic
TGGCACCGACGTATCGTGTT+CGG 0.511058 1.4:-64596110 None:intergenic
GAGGCCATATGGATTGTTGA+TGG 0.511702 1.4:+64595817 MS.gene005052:CDS
TACGGGATTGTTTGCAAAGG+GGG 0.512801 1.4:+64595766 MS.gene005052:CDS
TATGGGATAGGGAGGCCATA+TGG 0.515597 1.4:+64595806 MS.gene005052:CDS
AACGGAGCCTGCGCAGAGCA+TGG 0.515746 1.4:-64594790 None:intergenic
CAGCTTCTTTCTCTACCAAT+GGG 0.516999 1.4:+64594983 MS.gene005052:CDS
AACTGCAGGTTGTTCTGTTG+TGG 0.517299 1.4:+64595601 MS.gene005052:CDS
AATTAGGGTTTATGATGGGT+AGG 0.517824 1.4:+64596053 MS.gene005052:CDS
ATGGAAATATGAGTAACAAA+AGG 0.518100 1.4:+64595417 MS.gene005052:CDS
GGCCGGTCTGTTGCATTGAA+AGG 0.519192 1.4:+64595299 MS.gene005052:CDS
GCGGCCGATGAAGCCGTTGG+AGG 0.520644 1.4:-64594916 None:intergenic
CGTATCGTGTTCGGTGGCAG+AGG 0.523564 1.4:-64596101 None:intergenic
CGGCCGATGAAGCCGTTGGA+GGG 0.527370 1.4:-64594915 None:intergenic
AATGTCCTCGACGCTGCAGC+CGG 0.530902 1.4:+64594846 MS.gene005052:CDS
TGGTATAGCAGGGTTATGGG+GGG 0.532932 1.4:+64595235 MS.gene005052:CDS
GGTGTCACAACAACACTGGC+TGG 0.534256 1.4:+64595476 MS.gene005052:CDS
CCCAAATAAAACATCACCAT+TGG 0.534895 1.4:-64595165 None:intergenic
GCGCAGTTACACGGAGGGTG+TGG 0.537438 1.4:+64595725 MS.gene005052:CDS
CGGTTCAGGTGTGGTTCACA+TGG 0.537956 1.4:+64595208 MS.gene005052:CDS
GAGGGAGACACACTCATGGC+CGG 0.540366 1.4:-64596082 None:intergenic
GCCTTTGGAGCACCCTCCAA+CGG 0.540428 1.4:+64594903 MS.gene005052:CDS
GCCAGCCCAACGCGAACCAA+TGG 0.540771 1.4:+64595149 MS.gene005052:CDS
ATAGGGCGGTTCGACCGGAC+AGG 0.541559 1.4:+64595278 MS.gene005052:CDS
GGCGGTTCGACCGGACAGGC+CGG 0.542744 1.4:+64595282 MS.gene005052:CDS
AACGTCATTGACGTGTGTAA+TGG 0.544203 1.4:+64595554 MS.gene005052:CDS
GGTTGGTACGGGTTCAACCC+CGG 0.549923 1.4:+64595368 MS.gene005052:CDS
CTGTAGTCACCCGAAGGTGA+AGG 0.551464 1.4:-64594963 None:intergenic
TATGATGGGTAGGATTGAGC+CGG 0.553940 1.4:+64596063 MS.gene005052:CDS
GTCCTCGACGCTGCAGCCGG+TGG 0.554837 1.4:+64594849 MS.gene005052:CDS
AGGACATAGCGCGTCGTTGG+TGG 0.555347 1.4:+64595319 MS.gene005052:CDS
TTCAGGTGTGGTTCACATGG+TGG 0.556560 1.4:+64595211 MS.gene005052:CDS
AATGGAGCCACTAGTGATAC+CGG 0.557459 1.4:-64595024 None:intergenic
GTGTGTAATGGTTTACTTGG+CGG 0.557557 1.4:+64595566 MS.gene005052:CDS
GCATAGGTAGTCTGCAACGG+CGG 0.557659 1.4:-64594658 None:intergenic
GGATGATGAGACTGCAGGGA+TGG 0.557751 1.4:+64595964 MS.gene005052:CDS
GTTTACGGGATTGTTTGCAA+AGG 0.562175 1.4:+64595763 MS.gene005052:CDS
AAATTGAGTTCTCTCTGCAA+TGG 0.563390 1.4:-64595042 None:intergenic
ACCGGCAGCAGCGATGGCGA+AGG 0.564745 1.4:-64595006 None:intergenic
ATAAGCTGAGAAGAGAAGGT+AGG 0.565446 1.4:-64594739 None:intergenic
TGAAATTGTTGAGGATATCG+AGG 0.567161 1.4:+64595942 MS.gene005052:CDS
GTGGCGGCCGATGAAGCCGT+TGG 0.567324 1.4:-64594919 None:intergenic
CCATATGGATTGTTGATGGG+TGG 0.567763 1.4:+64595821 MS.gene005052:CDS
TTATTCAGCCCATAAAATAA+CGG 0.567889 1.4:-64595917 None:intergenic
AACGGTTATTAGTTGGACAC+TGG 0.568051 1.4:+64595531 MS.gene005052:CDS
AGGCCATATGGATTGTTGAT+GGG 0.568103 1.4:+64595818 MS.gene005052:CDS
CAAACCCAATGCGAAACGAT+GGG 0.569510 1.4:-64595110 None:intergenic
GTCCTTTCAATGCAACAGAC+CGG 0.570037 1.4:-64595301 None:intergenic
TGGTGTTGAATTGGGTGCAT+AGG 0.570282 1.4:-64594674 None:intergenic
TTAGTCTTTGCCATGCAGCT+CGG 0.570620 1.4:+64594762 MS.gene005052:CDS
CATGGCGAAACCGAGCTGCA+TGG 0.571462 1.4:-64594772 None:intergenic
AGTGATACCGGCAGCAGCGA+TGG 0.573055 1.4:-64595012 None:intergenic
GGCTGCAGCGTCGAGGACAT+TGG 0.575668 1.4:-64594844 None:intergenic
TTGTTCTGTTGTGGAACCAT+GGG 0.576456 1.4:+64595610 MS.gene005052:CDS
CCAAACCCAATGCGAAACGA+TGG 0.576636 1.4:-64595111 None:intergenic
TGACTTTGCCGGTTCAGGTG+TGG 0.579151 1.4:+64595199 MS.gene005052:CDS
TTAGAGGCTGCGCAGTTACA+CGG 0.582164 1.4:+64595716 MS.gene005052:CDS
TGTAGTCACCCGAAGGTGAA+GGG 0.585601 1.4:-64594962 None:intergenic
CATGGGCCGCGATTGTGTGT+GGG 0.586850 1.4:+64595627 MS.gene005052:CDS
CGAGGGATGATGAGACTGCA+GGG 0.589259 1.4:+64595960 MS.gene005052:CDS
GTAGGTGTTGTCTATTGCAT+AGG 0.590077 1.4:-64594721 None:intergenic
TGAATAAGATGAAATTGTTG+AGG 0.592343 1.4:+64595933 MS.gene005052:CDS
AAATAACGGCACCATCGTGA+CGG 0.592498 1.4:-64595903 None:intergenic
AGGAAATTAGGGTTTATGAT+GGG 0.592652 1.4:+64596049 MS.gene005052:CDS
AACAAACCCACACACAATCG+CGG 0.593035 1.4:-64595633 None:intergenic
GGTGTTGTCTATTGCATAGG+TGG 0.593690 1.4:-64594718 None:intergenic
TTGCGTTTGCGGTGGTGGTG+AGG 0.596669 1.4:-64594635 None:intergenic
TGCGGTGGTGGTGAGGAGTG+GGG 0.601876 1.4:-64594628 None:intergenic
GGCAGAGGGAGACACACTCA+TGG 0.604115 1.4:-64596086 None:intergenic
GCTGCTGCCGGTATCACTAG+TGG 0.604144 1.4:+64595017 MS.gene005052:CDS
CCACACACAATCGCGGCCCA+TGG 0.607906 1.4:-64595626 None:intergenic
AGCCAAATAGATAGTAGGAG+AGG 0.608112 1.4:-64594872 None:intergenic
GGTGTGGTTCACATGGTGGG+TGG 0.612109 1.4:+64595215 MS.gene005052:CDS
ATGAGATTTATGGGATAGGG+AGG 0.617665 1.4:+64595798 MS.gene005052:CDS
TGTGTGGGTTTGTTGCGGCG+TGG 0.623345 1.4:+64595642 MS.gene005052:CDS
TGGACTTGACTAGACATGGT+GGG 0.625359 1.4:+64595984 MS.gene005052:CDS
GATTGTGTGTGGGTTTGTTG+CGG 0.627273 1.4:+64595637 MS.gene005052:CDS
GGTGCATAGGTAGTCTGCAA+CGG 0.633576 1.4:-64594661 None:intergenic
GAAATTGTTGAGGATATCGA+GGG 0.633706 1.4:+64595943 MS.gene005052:CDS
AACAGGTGTCACAACAACAC+TGG 0.637368 1.4:+64595472 MS.gene005052:CDS
CACCGACGTATCGTGTTCGG+TGG 0.638372 1.4:-64596107 None:intergenic
GTATCGTGTTCGGTGGCAGA+GGG 0.638569 1.4:-64596100 None:intergenic
AACGGCGGTTGCGTTTGCGG+TGG 0.642746 1.4:-64594643 None:intergenic
TGCTTATGCGTATCATGACG+AGG 0.643185 1.4:+64596009 MS.gene005052:CDS
GGCCACCGGCTGCAGCGTCG+AGG 0.648352 1.4:-64594851 None:intergenic
TAGATAGTAGGAGAGGCCAC+CGG 0.654386 1.4:-64594865 None:intergenic
ACATGGTGGGTGGTATAGCA+GGG 0.662991 1.4:+64595225 MS.gene005052:CDS
AAGTGATGATATCACACTGA+AGG 0.666643 1.4:-64596142 None:intergenic
AAGAAGCTGTAGTCACCCGA+AGG 0.668205 1.4:-64594969 None:intergenic
AGGCTGCGCAGTTACACGGA+GGG 0.669758 1.4:+64595720 MS.gene005052:CDS
ACCGGCAAAGTCAATAACAC+CGG 0.670560 1.4:-64595189 None:intergenic
AAACCCAATGCGAAACGATG+GGG 0.679819 1.4:-64595109 None:intergenic
TAGAAGGTCCTAGAATAGGG+CGG 0.681945 1.4:+64595264 MS.gene005052:CDS
TGGGTGGGTTACCGTCACGA+TGG 0.684596 1.4:+64595892 MS.gene005052:CDS
GGGATGGACTTGACTAGACA+TGG 0.695287 1.4:+64595980 MS.gene005052:CDS
ATGGACTTGACTAGACATGG+TGG 0.698702 1.4:+64595983 MS.gene005052:CDS
TGCCACCGAACACGATACGT+CGG 0.704524 1.4:+64596105 MS.gene005052:CDS
TTACGGGATTGTTTGCAAAG+GGG 0.721445 1.4:+64595765 MS.gene005052:CDS
GAGGCTGCGCAGTTACACGG+AGG 0.735378 1.4:+64595719 MS.gene005052:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTCTTCTTTTTTAAC+CGG + chr1.4:64595077-64595096 MS.gene005052:CDS 15.0%
!! AAAAGAAGAATATATGAGAT+AGG - chr1.4:64595072-64595091 None:intergenic 20.0%
!! AGTAACAAAAGGAATTATTA+TGG + chr1.4:64595428-64595447 MS.gene005052:CDS 20.0%
!! TGCAATTATTAAAAATGAAC+CGG - chr1.4:64595390-64595409 None:intergenic 20.0%
!! TTAATAATTGCAAAAAGCTA+TGG + chr1.4:64595398-64595417 MS.gene005052:CDS 20.0%
! AAAGGAATTATTATGGTCAA+TGG + chr1.4:64595435-64595454 MS.gene005052:CDS 25.0%
! ATGGAAATATGAGTAACAAA+AGG + chr1.4:64595417-64595436 MS.gene005052:CDS 25.0%
! CAATTATTAAAAATGAACCG+GGG - chr1.4:64595388-64595407 None:intergenic 25.0%
! GCAATTATTAAAAATGAACC+GGG - chr1.4:64595389-64595408 None:intergenic 25.0%
! TGAATAAGATGAAATTGTTG+AGG + chr1.4:64595933-64595952 MS.gene005052:CDS 25.0%
! TTATTCAGCCCATAAAATAA+CGG - chr1.4:64595920-64595939 None:intergenic 25.0%
! TTTAGTAAACGGTTATTAGT+TGG + chr1.4:64595524-64595543 MS.gene005052:CDS 25.0%
! TTTGATTGGGCTTAATAAAT+TGG + chr1.4:64595667-64595686 MS.gene005052:CDS 25.0%
!! AGTATGTTGATGAGATTTAT+GGG + chr1.4:64595789-64595808 MS.gene005052:CDS 25.0%
!! TGACAACTTTGTTTAGTAAA+CGG + chr1.4:64595513-64595532 MS.gene005052:CDS 25.0%
!!! CTTTTTTATTATGGTTTGGT+TGG + chr1.4:64595351-64595370 MS.gene005052:CDS 25.0%
!!! GGTTCTTTTTTATTATGGTT+TGG + chr1.4:64595347-64595366 MS.gene005052:CDS 25.0%
!!! TGTTGGGTTCTTTTTTATTA+TGG + chr1.4:64595342-64595361 MS.gene005052:CDS 25.0%
ACGAGTCTATTAGGAAATTA+GGG + chr1.4:64596038-64596057 MS.gene005052:CDS 30.0%
AGGAAATTAGGGTTTATGAT+GGG + chr1.4:64596049-64596068 MS.gene005052:CDS 30.0%
GCTTAATAAATTGGCGATTA+AGG + chr1.4:64595676-64595695 MS.gene005052:CDS 30.0%
TAGGAAATTAGGGTTTATGA+TGG + chr1.4:64596048-64596067 MS.gene005052:CDS 30.0%
TTATAGAAGGTCCTAGAATA+GGG + chr1.4:64595261-64595280 MS.gene005052:CDS 30.0%
TTGATGAGATTTATGGGATA+GGG + chr1.4:64595795-64595814 MS.gene005052:CDS 30.0%
TTTATAGAAGGTCCTAGAAT+AGG + chr1.4:64595260-64595279 MS.gene005052:CDS 30.0%
! ATTTGAGATGGTGTTGAATT+GGG - chr1.4:64594685-64594704 None:intergenic 30.0%
! GAGTATGTTGATGAGATTTA+TGG + chr1.4:64595788-64595807 MS.gene005052:CDS 30.0%
! TATTTGAGATGGTGTTGAAT+TGG - chr1.4:64594686-64594705 None:intergenic 30.0%
!! ACCAATGGTGATGTTTTATT+TGG + chr1.4:64595164-64595183 MS.gene005052:CDS 30.0%
!! TTATTATGGTTTGGTTGGTA+CGG + chr1.4:64595356-64595375 MS.gene005052:CDS 30.0%
!!! CCAATGGTGATGTTTTATTT+GGG + chr1.4:64595165-64595184 MS.gene005052:CDS 30.0%
AAATTGAGTTCTCTCTGCAA+TGG - chr1.4:64595045-64595064 None:intergenic 35.0%
AGCAAAGCCAAATAGATAGT+AGG - chr1.4:64594880-64594899 None:intergenic 35.0%
CCCAAATAAAACATCACCAT+TGG - chr1.4:64595168-64595187 None:intergenic 35.0%
CTAAATAAGCTGAGAAGAGA+AGG - chr1.4:64594746-64594765 None:intergenic 35.0%
GAAATTGTTGAGGATATCGA+GGG + chr1.4:64595943-64595962 MS.gene005052:CDS 35.0%
GAAGTATGATGATCCATTAG+AGG + chr1.4:64595700-64595719 MS.gene005052:CDS 35.0%
GACGAGTCTATTAGGAAATT+AGG + chr1.4:64596037-64596056 MS.gene005052:CDS 35.0%
TGAAATTGTTGAGGATATCG+AGG + chr1.4:64595942-64595961 MS.gene005052:CDS 35.0%
TTTACGGGATTGTTTGCAAA+GGG + chr1.4:64595764-64595783 MS.gene005052:CDS 35.0%
! CATGATGTTCATGGTGTTTT+TGG - chr1.4:64594820-64594839 None:intergenic 35.0%
! GTTGATGAGATTTATGGGAT+AGG + chr1.4:64595794-64595813 MS.gene005052:CDS 35.0%
!! AATTAGGGTTTATGATGGGT+AGG + chr1.4:64596053-64596072 MS.gene005052:CDS 35.0%
!! TATTATGGTTTGGTTGGTAC+GGG + chr1.4:64595357-64595376 MS.gene005052:CDS 35.0%
AACGATGGGGTAAACAAAAC+CGG - chr1.4:64595099-64595118 None:intergenic 40.0%
AACGGTTATTAGTTGGACAC+TGG + chr1.4:64595531-64595550 MS.gene005052:CDS 40.0%
AACGTCATTGACGTGTGTAA+TGG + chr1.4:64595554-64595573 MS.gene005052:CDS 40.0%
AATCCCTTAGACCGAAAAAG+TGG - chr1.4:64594941-64594960 None:intergenic 40.0%
ACAGCTTCTTTCTCTACCAA+TGG + chr1.4:64594982-64595001 MS.gene005052:CDS 40.0%
AGCCAAATAGATAGTAGGAG+AGG - chr1.4:64594875-64594894 None:intergenic 40.0%
AGGAAGATGACGAGTCTATT+AGG + chr1.4:64596029-64596048 MS.gene005052:CDS 40.0%
ATAAGCTGAGAAGAGAAGGT+AGG - chr1.4:64594742-64594761 None:intergenic 40.0%
ATGAGATTTATGGGATAGGG+AGG + chr1.4:64595798-64595817 MS.gene005052:CDS 40.0%
ATTGGTGAGCATGATGTTCA+TGG - chr1.4:64594829-64594848 None:intergenic 40.0%
CAGCTTCTTTCTCTACCAAT+GGG + chr1.4:64594983-64595002 MS.gene005052:CDS 40.0%
GACGTGTGTAATGGTTTACT+TGG + chr1.4:64595563-64595582 MS.gene005052:CDS 40.0%
GTCGCTGAGTTTATTTGAGA+TGG - chr1.4:64594697-64594716 None:intergenic 40.0%
GTGTGTAATGGTTTACTTGG+CGG + chr1.4:64595566-64595585 MS.gene005052:CDS 40.0%
GTTTACGGGATTGTTTGCAA+AGG + chr1.4:64595763-64595782 MS.gene005052:CDS 40.0%
TGCAGAGAGAACTCAATTTG+TGG + chr1.4:64595046-64595065 MS.gene005052:CDS 40.0%
TTACGGGATTGTTTGCAAAG+GGG + chr1.4:64595765-64595784 MS.gene005052:CDS 40.0%
TTGTTCTGTTGTGGAACCAT+GGG + chr1.4:64595610-64595629 MS.gene005052:CDS 40.0%
! AGGCCATATGGATTGTTGAT+GGG + chr1.4:64595818-64595837 MS.gene005052:CDS 40.0%
! GTAGGTGTTGTCTATTGCAT+AGG - chr1.4:64594724-64594743 None:intergenic 40.0%
! TATGGTCAATGGAGTGCTAT+TGG + chr1.4:64595446-64595465 MS.gene005052:CDS 40.0%
!! TTATGGGGGGCATTTATAGA+AGG + chr1.4:64595248-64595267 MS.gene005052:CDS 40.0%
!! TTGAGGTGCTGGTTATTTGT+GGG + chr1.4:64595873-64595892 MS.gene005052:CDS 40.0%
!!! ACGATGGTGCCGTTATTTTA+TGG + chr1.4:64595908-64595927 MS.gene005052:CDS 40.0%
!!! CGATGGTGCCGTTATTTTAT+GGG + chr1.4:64595909-64595928 MS.gene005052:CDS 40.0%
!!! GGTGATGTTTTATTTGGGTC+CGG + chr1.4:64595170-64595189 MS.gene005052:CDS 40.0%
AAACCCAATGCGAAACGATG+GGG - chr1.4:64595112-64595131 None:intergenic 45.0%
AAATAACGGCACCATCGTGA+CGG - chr1.4:64595906-64595925 None:intergenic 45.0%
AACAAACCCACACACAATCG+CGG - chr1.4:64595636-64595655 None:intergenic 45.0%
AACTGCAGGTTGTTCTGTTG+TGG + chr1.4:64595601-64595620 MS.gene005052:CDS 45.0%
AAGGGATTACCCTTCACCTT+CGG + chr1.4:64594953-64594972 MS.gene005052:CDS 45.0%
AATGGAGCCACTAGTGATAC+CGG - chr1.4:64595027-64595046 None:intergenic 45.0%
ACCGGCAAAGTCAATAACAC+CGG - chr1.4:64595192-64595211 None:intergenic 45.0%
ATGGACTTGACTAGACATGG+TGG + chr1.4:64595983-64596002 MS.gene005052:CDS 45.0%
CAAACCCAATGCGAAACGAT+GGG - chr1.4:64595113-64595132 None:intergenic 45.0%
CCACCCATCAACAATCCATA+TGG - chr1.4:64595824-64595843 None:intergenic 45.0%
GGCCTCTCCTACTATCTATT+TGG + chr1.4:64594870-64594889 MS.gene005052:CDS 45.0%
GTCCTTTCAATGCAACAGAC+CGG - chr1.4:64595304-64595323 None:intergenic 45.0%
GTTGTTCTGTTGTGGAACCA+TGG + chr1.4:64595609-64595628 MS.gene005052:CDS 45.0%
TACGGGATTGTTTGCAAAGG+GGG + chr1.4:64595766-64595785 MS.gene005052:CDS 45.0%
TAGAAGGTCCTAGAATAGGG+CGG + chr1.4:64595264-64595283 MS.gene005052:CDS 45.0%
TGCTTATGCGTATCATGACG+AGG + chr1.4:64596009-64596028 MS.gene005052:CDS 45.0%
TGGACTTGACTAGACATGGT+GGG + chr1.4:64595984-64596003 MS.gene005052:CDS 45.0%
TTACCCCATCGTTTCGCATT+GGG + chr1.4:64595106-64595125 MS.gene005052:CDS 45.0%
TTTACCCCATCGTTTCGCAT+TGG + chr1.4:64595105-64595124 MS.gene005052:CDS 45.0%
! AACAGGTGTCACAACAACAC+TGG + chr1.4:64595472-64595491 MS.gene005052:CDS 45.0%
! CCATATGGATTGTTGATGGG+TGG + chr1.4:64595821-64595840 MS.gene005052:CDS 45.0%
! GAGGCCATATGGATTGTTGA+TGG + chr1.4:64595817-64595836 MS.gene005052:CDS 45.0%
! GGTGTTGTCTATTGCATAGG+TGG - chr1.4:64594721-64594740 None:intergenic 45.0%
! GGTTTTGCTGCTATAACTGC+AGG + chr1.4:64595587-64595606 MS.gene005052:CDS 45.0%
! TATGGATTGTTGATGGGTGG+TGG + chr1.4:64595824-64595843 MS.gene005052:CDS 45.0%
! TGGAGTGCTATTGGAAGAAC+AGG + chr1.4:64595455-64595474 MS.gene005052:CDS 45.0%
! TGGTGTTGAATTGGGTGCAT+AGG - chr1.4:64594677-64594696 None:intergenic 45.0%
! TTAGTCTTTGCCATGCAGCT+CGG + chr1.4:64594762-64594781 MS.gene005052:CDS 45.0%
!! GATTGTGTGTGGGTTTGTTG+CGG + chr1.4:64595637-64595656 MS.gene005052:CDS 45.0%
!! GTTATTGACTTTGCCGGTTC+AGG + chr1.4:64595194-64595213 MS.gene005052:CDS 45.0%
!! GTTGAGGTGCTGGTTATTTG+TGG + chr1.4:64595872-64595891 MS.gene005052:CDS 45.0%
!! TATGATGGGTAGGATTGAGC+CGG + chr1.4:64596063-64596082 MS.gene005052:CDS 45.0%
!! TCCGGTGTTATTGACTTTGC+CGG + chr1.4:64595188-64595207 MS.gene005052:CDS 45.0%
!! TTTGGCTTTGCTTTCGCCTT+TGG + chr1.4:64594888-64594907 MS.gene005052:CDS 45.0%
!!! CATGGTGTTTTTGGCTCGAA+CGG - chr1.4:64594811-64594830 None:intergenic 45.0%
AAGAAGCTGTAGTCACCCGA+AGG - chr1.4:64594972-64594991 None:intergenic 50.0%
AGGGATTACCCTTCACCTTC+GGG + chr1.4:64594954-64594973 MS.gene005052:CDS 50.0%
CATGTGAACCACACCTGAAC+CGG - chr1.4:64595210-64595229 None:intergenic 50.0%
CCAAACCCAATGCGAAACGA+TGG - chr1.4:64595114-64595133 None:intergenic 50.0%
CCATCGTTTCGCATTGGGTT+TGG + chr1.4:64595111-64595130 MS.gene005052:CDS 50.0%
CCCTTAGACCGAAAAAGTGG+CGG - chr1.4:64594938-64594957 None:intergenic 50.0%
GGGTGGTATAGCAGGGTTAT+GGG + chr1.4:64595232-64595251 MS.gene005052:CDS 50.0%
GGTGCATAGGTAGTCTGCAA+CGG - chr1.4:64594664-64594683 None:intergenic 50.0%
GGTGGTATAGCAGGGTTATG+GGG + chr1.4:64595233-64595252 MS.gene005052:CDS 50.0%
GTGGTATAGCAGGGTTATGG+GGG + chr1.4:64595234-64595253 MS.gene005052:CDS 50.0%
TAGATAGTAGGAGAGGCCAC+CGG - chr1.4:64594868-64594887 None:intergenic 50.0%
TATGGGATAGGGAGGCCATA+TGG + chr1.4:64595806-64595825 MS.gene005052:CDS 50.0%
TCAGGTGTGGTTCACATGGT+GGG + chr1.4:64595212-64595231 MS.gene005052:CDS 50.0%
TGGGTGGTATAGCAGGGTTA+TGG + chr1.4:64595231-64595250 MS.gene005052:CDS 50.0%
TGGTATAGCAGGGTTATGGG+GGG + chr1.4:64595235-64595254 MS.gene005052:CDS 50.0%
TGTAACTGCGCAGCCTCTAA+TGG - chr1.4:64595716-64595735 None:intergenic 50.0%
TGTAGTCACCCGAAGGTGAA+GGG - chr1.4:64594965-64594984 None:intergenic 50.0%
TTAGAGGCTGCGCAGTTACA+CGG + chr1.4:64595716-64595735 MS.gene005052:CDS 50.0%
TTCAGGTGTGGTTCACATGG+TGG + chr1.4:64595211-64595230 MS.gene005052:CDS 50.0%
! CACACTGAAGGTGCACTGAT+TGG - chr1.4:64596133-64596152 None:intergenic 50.0%
! GGGATGGACTTGACTAGACA+TGG + chr1.4:64595980-64595999 MS.gene005052:CDS 50.0%
!! ACATCACCATTGGTTCGCGT+TGG - chr1.4:64595158-64595177 None:intergenic 50.0%
!! ACATGGTGGGTGGTATAGCA+GGG + chr1.4:64595225-64595244 MS.gene005052:CDS 50.0%
!! AGGTGCTGGTTATTTGTGGG+TGG + chr1.4:64595876-64595895 MS.gene005052:CDS 50.0%
!! CATCACCATTGGTTCGCGTT+GGG - chr1.4:64595157-64595176 None:intergenic 50.0%
!! GATTGTTGATGGGTGGTGGA+GGG + chr1.4:64595828-64595847 MS.gene005052:CDS 50.0%
!! GGTGCTGGTTATTTGTGGGT+GGG + chr1.4:64595877-64595896 MS.gene005052:CDS 50.0%
!!! CCGCCACTTTTTCGGTCTAA+GGG + chr1.4:64594935-64594954 MS.gene005052:CDS 50.0%
!!! TTCATCGGCCGCCACTTTTT+CGG + chr1.4:64594927-64594946 MS.gene005052:CDS 50.0%
!!! TTGCGGCGTGGGTTTTGATT+GGG + chr1.4:64595654-64595673 MS.gene005052:CDS 50.0%
CGAGGGATGATGAGACTGCA+GGG + chr1.4:64595960-64595979 MS.gene005052:CDS 55.0%
CGGTTCAGGTGTGGTTCACA+TGG + chr1.4:64595208-64595227 MS.gene005052:CDS 55.0%
CTAGAATAGGGCGGTTCGAC+CGG + chr1.4:64595273-64595292 MS.gene005052:CDS 55.0%
CTGTAGTCACCCGAAGGTGA+AGG - chr1.4:64594966-64594985 None:intergenic 55.0%
GAAAGGACATAGCGCGTCGT+TGG + chr1.4:64595316-64595335 MS.gene005052:CDS 55.0%
GCATAGGTAGTCTGCAACGG+CGG - chr1.4:64594661-64594680 None:intergenic 55.0%
GGATGATGAGACTGCAGGGA+TGG + chr1.4:64595964-64595983 MS.gene005052:CDS 55.0%
GGCCGGTCTGTTGCATTGAA+AGG + chr1.4:64595299-64595318 MS.gene005052:CDS 55.0%
TCGAGGGATGATGAGACTGC+AGG + chr1.4:64595959-64595978 MS.gene005052:CDS 55.0%
TGCCACCGAACACGATACGT+CGG + chr1.4:64596105-64596124 MS.gene005052:CDS 55.0%
TGGTGGAGGGAGGTTGTTTG+CGG + chr1.4:64595841-64595860 MS.gene005052:CDS 55.0%
! CATTGGGTTTGGTCTGCCGA+TGG + chr1.4:64595122-64595141 MS.gene005052:CDS 55.0%
! GGATTGTTGATGGGTGGTGG+AGG + chr1.4:64595827-64595846 MS.gene005052:CDS 55.0%
! GGTGTCACAACAACACTGGC+TGG + chr1.4:64595476-64595495 MS.gene005052:CDS 55.0%
! GGTTTGGTCTGCCGATGGTT+GGG + chr1.4:64595127-64595146 MS.gene005052:CDS 55.0%
! GTATCGTGTTCGGTGGCAGA+GGG - chr1.4:64596103-64596122 None:intergenic 55.0%
!! CACATGGTGGGTGGTATAGC+AGG + chr1.4:64595224-64595243 MS.gene005052:CDS 55.0%
!! CGCATGGGGGGTGTTGTTTA+CGG + chr1.4:64595748-64595767 MS.gene005052:CDS 55.0%
!! GCATGGGGGGTGTTGTTTAC+GGG + chr1.4:64595749-64595768 MS.gene005052:CDS 55.0%
!! GTTGCGGCGTGGGTTTTGAT+TGG + chr1.4:64595653-64595672 MS.gene005052:CDS 55.0%
!! TGACTTTGCCGGTTCAGGTG+TGG + chr1.4:64595199-64595218 MS.gene005052:CDS 55.0%
!! TGGCACCGACGTATCGTGTT+CGG - chr1.4:64596113-64596132 None:intergenic 55.0%
!!! GCCGCCACTTTTTCGGTCTA+AGG + chr1.4:64594934-64594953 MS.gene005052:CDS 55.0%
AATGTCCTCGACGCTGCAGC+CGG + chr1.4:64594846-64594865 MS.gene005052:CDS 60.0%
AGGACATAGCGCGTCGTTGG+TGG + chr1.4:64595319-64595338 MS.gene005052:CDS 60.0%
AGGCTGCGCAGTTACACGGA+GGG + chr1.4:64595720-64595739 MS.gene005052:CDS 60.0%
AGTGATACCGGCAGCAGCGA+TGG - chr1.4:64595015-64595034 None:intergenic 60.0%
ATGCAACAGACCGGCCTGTC+CGG - chr1.4:64595295-64595314 None:intergenic 60.0%
CACCGACGTATCGTGTTCGG+TGG - chr1.4:64596110-64596129 None:intergenic 60.0%
CATGGCGAAACCGAGCTGCA+TGG - chr1.4:64594775-64594794 None:intergenic 60.0%
CATGGGCCGCGATTGTGTGT+GGG + chr1.4:64595627-64595646 MS.gene005052:CDS 60.0%
CGGTCGAACCGCCCTATTCT+AGG - chr1.4:64595275-64595294 None:intergenic 60.0%
GAGGGAGACACACTCATGGC+CGG - chr1.4:64596085-64596104 None:intergenic 60.0%
GCACCCTCCAACGGCTTCAT+CGG + chr1.4:64594912-64594931 MS.gene005052:CDS 60.0%
GCTGCTGCCGGTATCACTAG+TGG + chr1.4:64595017-64595036 MS.gene005052:CDS 60.0%
GGCAGAGGGAGACACACTCA+TGG - chr1.4:64596089-64596108 None:intergenic 60.0%
TGCAACGGCGGTTGCGTTTG+CGG - chr1.4:64594649-64594668 None:intergenic 60.0%
! CGTATCGTGTTCGGTGGCAG+AGG - chr1.4:64596104-64596123 None:intergenic 60.0%
! GGGTTTGGTCTGCCGATGGT+TGG + chr1.4:64595126-64595145 MS.gene005052:CDS 60.0%
! GGTGTGGTTCACATGGTGGG+TGG + chr1.4:64595215-64595234 MS.gene005052:CDS 60.0%
! GGTTGGTACGGGTTCAACCC+CGG + chr1.4:64595368-64595387 MS.gene005052:CDS 60.0%
! TTGCGGTGGTGGTGAGGAGT+GGG - chr1.4:64594632-64594651 None:intergenic 60.0%
! TTGCGTTTGCGGTGGTGGTG+AGG - chr1.4:64594638-64594657 None:intergenic 60.0%
! TTTGCGGTGGTGGTGAGGAG+TGG - chr1.4:64594633-64594652 None:intergenic 60.0%
!! ACCATTGGTTCGCGTTGGGC+TGG - chr1.4:64595153-64595172 None:intergenic 60.0%
!! AGCGCGTCGTTGGTGGTGTT+GGG + chr1.4:64595326-64595345 MS.gene005052:CDS 60.0%
!! GCCTTTGGAGCACCCTCCAA+CGG + chr1.4:64594903-64594922 MS.gene005052:CDS 60.0%
!! GTGTGGGTTTGTTGCGGCGT+GGG + chr1.4:64595643-64595662 MS.gene005052:CDS 60.0%
!! TAGCGCGTCGTTGGTGGTGT+TGG + chr1.4:64595325-64595344 MS.gene005052:CDS 60.0%
!! TGGGTGGGTTACCGTCACGA+TGG + chr1.4:64595892-64595911 MS.gene005052:CDS 60.0%
!! TGTGTGGGTTTGTTGCGGCG+TGG + chr1.4:64595642-64595661 MS.gene005052:CDS 60.0%
!! TGTTGATGGGTGGTGGAGGG+AGG + chr1.4:64595831-64595850 MS.gene005052:CDS 60.0%
AACGGAGCCTGCGCAGAGCA+TGG - chr1.4:64594793-64594812 None:intergenic 65.0%
AACGGCGGTTGCGTTTGCGG+TGG - chr1.4:64594646-64594665 None:intergenic 65.0%
AGGGAGGTTGTTTGCGGCGC+AGG + chr1.4:64595847-64595866 MS.gene005052:CDS 65.0%
ATAGGGCGGTTCGACCGGAC+AGG + chr1.4:64595278-64595297 MS.gene005052:CDS 65.0%
CAGCGATGGCGAAGGCCCAT+TGG - chr1.4:64595001-64595020 None:intergenic 65.0%
CCACACACAATCGCGGCCCA+TGG - chr1.4:64595629-64595648 None:intergenic 65.0%
CCATGGGCCGCGATTGTGTG+TGG + chr1.4:64595626-64595645 MS.gene005052:CDS 65.0%
CGGCCGATGAAGCCGTTGGA+GGG - chr1.4:64594918-64594937 None:intergenic 65.0%
GAGGAGTGGGGCTAGGTCTG+TGG - chr1.4:64594619-64594638 None:intergenic 65.0%
GAGGCTGCGCAGTTACACGG+AGG + chr1.4:64595719-64595738 MS.gene005052:CDS 65.0%
GAGGTTGTTTGCGGCGCAGG+TGG + chr1.4:64595850-64595869 MS.gene005052:CDS 65.0%
GCCAGCCCAACGCGAACCAA+TGG + chr1.4:64595149-64595168 MS.gene005052:CDS 65.0%
GCGCAGTTACACGGAGGGTG+TGG + chr1.4:64595725-64595744 MS.gene005052:CDS 65.0%
GGTTTCGCCATGCTCTGCGC+AGG + chr1.4:64594783-64594802 MS.gene005052:CDS 65.0%
GTTTGCGGCGCAGGTGGTTG+AGG + chr1.4:64595856-64595875 MS.gene005052:CDS 65.0%
! ACACGGAGGGTGTGGCGCAT+GGG + chr1.4:64595733-64595752 MS.gene005052:CDS 65.0%
! GGCTGCAGCGTCGAGGACAT+TGG - chr1.4:64594847-64594866 None:intergenic 65.0%
! TACACGGAGGGTGTGGCGCA+TGG + chr1.4:64595732-64595751 MS.gene005052:CDS 65.0%
! TGCGGTGGTGGTGAGGAGTG+GGG - chr1.4:64594631-64594650 None:intergenic 65.0%
! TGGTGGTGAGGAGTGGGGCT+AGG - chr1.4:64594626-64594645 None:intergenic 65.0%
!! CGTTGGGCTGGCCCAACCAT+CGG - chr1.4:64595141-64595160 None:intergenic 65.0%
!! GCCGTTGGAGGGTGCTCCAA+AGG - chr1.4:64594907-64594926 None:intergenic 65.0%
ACCGGCAGCAGCGATGGCGA+AGG - chr1.4:64595009-64595028 None:intergenic 70.0%
GCCTTCGCCATCGCTGCTGC+CGG + chr1.4:64595005-64595024 MS.gene005052:CDS 70.0%
GCGGCCGATGAAGCCGTTGG+AGG - chr1.4:64594919-64594938 None:intergenic 70.0%
GGCGCAGGTGGTTGAGGTGC+TGG + chr1.4:64595862-64595881 MS.gene005052:CDS 70.0%
GGCGGTTGCGTTTGCGGTGG+TGG - chr1.4:64594643-64594662 None:intergenic 70.0%
GTGGCGGCCGATGAAGCCGT+TGG - chr1.4:64594922-64594941 None:intergenic 70.0%
! ACGGAGGGTGTGGCGCATGG+GGG + chr1.4:64595735-64595754 MS.gene005052:CDS 70.0%
! CACGGAGGGTGTGGCGCATG+GGG + chr1.4:64595734-64595753 MS.gene005052:CDS 70.0%
GGCGGTTCGACCGGACAGGC+CGG + chr1.4:64595282-64595301 MS.gene005052:CDS 75.0%
GTCCTCGACGCTGCAGCCGG+TGG + chr1.4:64594849-64594868 MS.gene005052:CDS 75.0%
! CGGAGGGTGTGGCGCATGGG+GGG + chr1.4:64595736-64595755 MS.gene005052:CDS 75.0%
!! GGCCACCGGCTGCAGCGTCG+AGG - chr1.4:64594854-64594873 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 64594594 64596153 64594594 ID=MS.gene005052
chr1.4 mRNA 64594594 64596153 64594594 ID=MS.gene005052.t1;Parent=MS.gene005052
chr1.4 exon 64594594 64596153 64594594 ID=MS.gene005052.t1.exon1;Parent=MS.gene005052.t1
chr1.4 CDS 64594594 64596153 64594594 ID=cds.MS.gene005052.t1;Parent=MS.gene005052.t1
Gene Sequence

>MS.gene005052

ATGGCTTCTCTATCTTGCTCAGCCACAGACCTAGCCCCACTCCTCACCACCACCGCAAACGCAACCGCCGTTGCAGACTACCTATGCACCCAATTCAACACCATCTCAAATAAACTCAGCGACACCACCTATGCAATAGACAACACCTACCTTCTCTTCTCAGCTTATTTAGTCTTTGCCATGCAGCTCGGTTTCGCCATGCTCTGCGCAGGCTCCGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCAGCCGGTGGCCTCTCCTACTATCTATTTGGCTTTGCTTTCGCCTTTGGAGCACCCTCCAACGGCTTCATCGGCCGCCACTTTTTCGGTCTAAGGGATTACCCTTCACCTTCGGGTGACTACAGCTTCTTTCTCTACCAATGGGCCTTCGCCATCGCTGCTGCCGGTATCACTAGTGGCTCCATTGCAGAGAGAACTCAATTTGTGGCCTATCTCATATATTCTTCTTTTTTAACCGGTTTTGTTTACCCCATCGTTTCGCATTGGGTTTGGTCTGCCGATGGTTGGGCCAGCCCAACGCGAACCAATGGTGATGTTTTATTTGGGTCCGGTGTTATTGACTTTGCCGGTTCAGGTGTGGTTCACATGGTGGGTGGTATAGCAGGGTTATGGGGGGCATTTATAGAAGGTCCTAGAATAGGGCGGTTCGACCGGACAGGCCGGTCTGTTGCATTGAAAGGACATAGCGCGTCGTTGGTGGTGTTGGGTTCTTTTTTATTATGGTTTGGTTGGTACGGGTTCAACCCCGGTTCATTTTTAATAATTGCAAAAAGCTATGGAAATATGAGTAACAAAAGGAATTATTATGGTCAATGGAGTGCTATTGGAAGAACAGGTGTCACAACAACACTGGCTGGATGCACTGCAGCTTTGACAACTTTGTTTAGTAAACGGTTATTAGTTGGACACTGGAACGTCATTGACGTGTGTAATGGTTTACTTGGCGGTTTTGCTGCTATAACTGCAGGTTGTTCTGTTGTGGAACCATGGGCCGCGATTGTGTGTGGGTTTGTTGCGGCGTGGGTTTTGATTGGGCTTAATAAATTGGCGATTAAGGTGAAGTATGATGATCCATTAGAGGCTGCGCAGTTACACGGAGGGTGTGGCGCATGGGGGGTGTTGTTTACGGGATTGTTTGCAAAGGGGGAGTATGTTGATGAGATTTATGGGATAGGGAGGCCATATGGATTGTTGATGGGTGGTGGAGGGAGGTTGTTTGCGGCGCAGGTGGTTGAGGTGCTGGTTATTTGTGGGTGGGTTACCGTCACGATGGTGCCGTTATTTTATGGGCTGAATAAGATGAAATTGTTGAGGATATCGAGGGATGATGAGACTGCAGGGATGGACTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGACGAGGAAGATGACGAGTCTATTAGGAAATTAGGGTTTATGATGGGTAGGATTGAGCCGGCCATGAGTGTGTCTCCCTCTGCCACCGAACACGATACGTCGGTGCCAATCAGTGCACCTTCAGTGTGA
Protein sequence

>MS.gene005052.t1

MASLSCSATDLAPLLTTTANATAVADYLCTQFNTISNKLSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTNGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLIIAKSYGNMSNKRNYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGIGRPYGLLMGGGGRLFAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKLGFMMGRIEPAMSVSPSATEHDTSVPISAPSV