Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074590.t1 | XP_003627371.1 | 73.1 | 1289 | 136 | 20 | 1 | 1094 | 1 | 1273 | 0.00E+00 | 1393.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074590.t1 | G7L8C6 | 73.1 | 1289 | 136 | 20 | 1 | 1094 | 1 | 1273 | 0.0e+00 | 1393.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051067 | MS.gene074590 | 0.832914 | 7.20E-56 | -1.69E-46 |
| MS.gene05157 | MS.gene074590 | 0.802478 | 5.50E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene074590 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene074590 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene074590 | 0.849518 | 3.07E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene074590 | 0.857293 | 1.80E-62 | -1.69E-46 |
| MS.gene053174 | MS.gene074590 | 0.834378 | 3.10E-56 | -1.69E-46 |
| MS.gene054550 | MS.gene074590 | 0.849647 | 2.83E-60 | -1.69E-46 |
| MS.gene054584 | MS.gene074590 | 0.861903 | 7.40E-64 | -1.69E-46 |
| MS.gene054824 | MS.gene074590 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene074590 | 0.848131 | 7.45E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene074590 | 0.813381 | 2.63E-51 | -1.69E-46 |
| MS.gene055467 | MS.gene074590 | 0.822528 | 2.26E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene074590 | 0.821396 | 4.13E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene074590 | 0.830755 | 2.46E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene074590 | 0.818897 | 1.54E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene074590 | -0.811245 | 7.71E-51 | -1.69E-46 |
| MS.gene055890 | MS.gene074590 | 0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene074590 | 0.830326 | 3.13E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene074590 | 0.803386 | 3.57E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene074590 | 0.811188 | 7.93E-51 | -1.69E-46 |
| MS.gene058087 | MS.gene074590 | 0.822459 | 2.34E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene074590 | 0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene074590 | 0.800602 | 1.33E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074590.t1 | MTR_8g022280 | 73.623 | 1289 | 129 | 21 | 1 | 1094 | 1 | 1273 | 0.0 | 1679 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074590.t1 | AT3G14172 | 36.072 | 779 | 334 | 28 | 429 | 1094 | 489 | 1216 | 5.10e-96 | 332 |
| MS.gene074590.t1 | AT3G14172 | 39.329 | 328 | 144 | 10 | 20 | 312 | 9 | 316 | 2.00e-44 | 176 |
| MS.gene074590.t1 | AT3G14172 | 36.072 | 779 | 334 | 28 | 429 | 1094 | 519 | 1246 | 9.56e-96 | 332 |
| MS.gene074590.t1 | AT3G14172 | 38.525 | 366 | 151 | 10 | 1 | 312 | 1 | 346 | 2.53e-49 | 191 |
| MS.gene074590.t1 | AT3G14172 | 36.072 | 779 | 334 | 28 | 429 | 1094 | 527 | 1254 | 1.06e-95 | 332 |
| MS.gene074590.t1 | AT3G14172 | 37.701 | 374 | 151 | 11 | 1 | 312 | 1 | 354 | 5.31e-47 | 184 |
| MS.gene074590.t1 | AT1G72410 | 37.390 | 567 | 247 | 24 | 521 | 1041 | 547 | 1051 | 2.61e-70 | 256 |
| MS.gene074590.t1 | AT1G72410 | 37.390 | 567 | 247 | 24 | 521 | 1041 | 547 | 1051 | 2.64e-70 | 256 |
| MS.gene074590.t1 | AT1G17360 | 36.923 | 455 | 220 | 20 | 631 | 1041 | 530 | 961 | 6.15e-48 | 186 |
| MS.gene074590.t1 | AT1G17360 | 41.451 | 193 | 59 | 7 | 1 | 152 | 1 | 180 | 5.59e-30 | 129 |
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAACCCTGCAGAGTTTA+AGG | 0.106571 | 8.3:+71452991 | MS.gene074590:CDS |
| CTTGGGTTTGGGCTTGGTTA+TGG | 0.153240 | 8.3:-71450760 | None:intergenic |
| CCATGGGGACACGGAGTAAA+AGG | 0.183987 | 8.3:+71451635 | MS.gene074590:CDS |
| TCTTCCGTTGTTGGTTTAAA+TGG | 0.187586 | 8.3:+71451463 | MS.gene074590:CDS |
| TGTTAATGATAATAATAATT+TGG | 0.201403 | 8.3:+71451159 | MS.gene074590:CDS |
| GATCATCCCTCAGTTTAAAA+TGG | 0.210298 | 8.3:-71455115 | None:intergenic |
| TTGGGTTTGGGCTTGGTTAT+GGG | 0.217295 | 8.3:-71450759 | None:intergenic |
| AGCCAGGAATCTGGTAATTC+TGG | 0.228359 | 8.3:+71453327 | MS.gene074590:CDS |
| AATTTCTCGGAGCTTAATAT+TGG | 0.242108 | 8.3:+71452232 | MS.gene074590:CDS |
| GGATGTTTGGGCTTGGGTTT+GGG | 0.262884 | 8.3:-71450771 | None:intergenic |
| TTCTGGTAGAAAACAGGTTT+TGG | 0.275254 | 8.3:+71451699 | MS.gene074590:CDS |
| TGGTTCAGGCACATTGCTTC+TGG | 0.278758 | 8.3:-71452137 | None:intergenic |
| TGGATGTTTGGGCTTGGGTT+TGG | 0.282169 | 8.3:-71450772 | None:intergenic |
| AGTGCAAATATGAATCTTTC+TGG | 0.285893 | 8.3:+71451682 | MS.gene074590:CDS |
| TTTGGGCTTGGGTTTGGGCT+TGG | 0.288759 | 8.3:-71450766 | None:intergenic |
| TTCACCATTTCTAAAACTTC+TGG | 0.289259 | 8.3:-71446840 | None:intergenic |
| GAGGTTGCCACGTGGATGTT+TGG | 0.289865 | 8.3:-71450784 | None:intergenic |
| CAATCTAGAAGACCTGTAAT+AGG | 0.291798 | 8.3:+71452016 | MS.gene074590:CDS |
| GAGTAAAAGGGATGAGATTC+GGG | 0.297497 | 8.3:+71451648 | MS.gene074590:CDS |
| CACATTCTGTGCAGTCTATC+AGG | 0.298189 | 8.3:+71446638 | MS.gene074590:CDS |
| GCCACGTGGATGTTTGGGCT+TGG | 0.300860 | 8.3:-71450778 | None:intergenic |
| AATCTTCCATATCATATTCT+AGG | 0.311110 | 8.3:-71453212 | None:intergenic |
| ATTTCTCGGAGCTTAATATT+GGG | 0.324140 | 8.3:+71452233 | MS.gene074590:CDS |
| GACTCATGCGGGTAAGAAAA+AGG | 0.330755 | 8.3:-71453509 | None:intergenic |
| ATGAGGCGCGCGTGAGTTCC+AGG | 0.333119 | 8.3:-71453486 | None:intergenic |
| CCCGGAAAGATGTTGCAAAA+AGG | 0.333495 | 8.3:+71453687 | MS.gene074590:CDS |
| TAAGGCAAAGTCTGTCTTTA+CGG | 0.334094 | 8.3:+71452960 | MS.gene074590:CDS |
| GGTAATTCTGGGTCTGAAAT+TGG | 0.335276 | 8.3:+71453339 | MS.gene074590:CDS |
| TGAGTTGAGTCCCCTATTAC+AGG | 0.339701 | 8.3:-71452028 | None:intergenic |
| TCTAATTCCTCTTCCGTTGT+TGG | 0.341703 | 8.3:+71451454 | MS.gene074590:CDS |
| ATATCAGGAAGTTCATTAAA+AGG | 0.344001 | 8.3:+71455140 | MS.gene074590:CDS |
| ACAAGATGAAATTGGAAGTA+TGG | 0.344027 | 8.3:+71453257 | MS.gene074590:CDS |
| GAAAACACAAAGCCTTCTTC+TGG | 0.348550 | 8.3:+71452849 | MS.gene074590:CDS |
| CCTGAACCAGCTGTGAGTTC+GGG | 0.351175 | 8.3:+71452151 | MS.gene074590:CDS |
| TTTCTCAAATCAGAGAAGTT+TGG | 0.352015 | 8.3:-71452825 | None:intergenic |
| CGGTGGATAGTCAGAATTAT+GGG | 0.357242 | 8.3:+71452194 | MS.gene074590:CDS |
| AGCTGAAGCTTTGAAGAATC+AGG | 0.361383 | 8.3:+71451540 | MS.gene074590:CDS |
| AAAGTTGATGGAAATGCATT+AGG | 0.362668 | 8.3:-71453416 | None:intergenic |
| TTCTTCTGACGTGGGGTTCA+AGG | 0.362962 | 8.3:+71451210 | MS.gene074590:CDS |
| AGGTTGCCACGTGGATGTTT+GGG | 0.365025 | 8.3:-71450783 | None:intergenic |
| TGTTGATGCACGCGTAGAAC+AGG | 0.367067 | 8.3:+71452057 | MS.gene074590:CDS |
| CCTACACCGTTGAAAGTTGA+TGG | 0.367258 | 8.3:-71453428 | None:intergenic |
| CTTGGTTGAGTAATGAGTTC+TGG | 0.368182 | 8.3:-71450647 | None:intergenic |
| ACAGGGGAACAAGATGAAAT+TGG | 0.368444 | 8.3:+71453249 | MS.gene074590:CDS |
| GAATTCTCGTTCCCTTATCC+AGG | 0.373969 | 8.3:+71453580 | MS.gene074590:CDS |
| CCTAACAGAAATGTGTCTTC+AGG | 0.374477 | 8.3:+71452726 | MS.gene074590:CDS |
| GCTTCTATAGATTCTCCTAT+TGG | 0.375336 | 8.3:+71453545 | MS.gene074590:CDS |
| AAGGCAGAGTAAAGGAAATC+AGG | 0.377479 | 8.3:+71451774 | MS.gene074590:CDS |
| GAAGAGGAATGCTAAACTTC+AGG | 0.380932 | 8.3:+71452294 | MS.gene074590:CDS |
| AATGACGATGTTAAGTTTGA+TGG | 0.381260 | 8.3:+71451301 | MS.gene074590:CDS |
| AATCTAGAAGACCTGTAATA+GGG | 0.383907 | 8.3:+71452017 | MS.gene074590:CDS |
| CCACGTGGATGTTTGGGCTT+GGG | 0.384132 | 8.3:-71450777 | None:intergenic |
| GTTTATTATTACGTCGTTGT+TGG | 0.386490 | 8.3:-71450847 | None:intergenic |
| CCTGAAGACACATTTCTGTT+AGG | 0.387490 | 8.3:-71452726 | None:intergenic |
| CATCATTCTCACCCTGGATA+AGG | 0.388526 | 8.3:-71453592 | None:intergenic |
| CTCCTATTGGTAGCCCTGCT+TGG | 0.398520 | 8.3:+71453558 | MS.gene074590:CDS |
| AAGGAAAAGATGATCTCAAA+TGG | 0.401892 | 8.3:-71451513 | None:intergenic |
| ACGGTGGATAGTCAGAATTA+TGG | 0.404942 | 8.3:+71452193 | MS.gene074590:CDS |
| GAATCTTTCTGGTAGAAAAC+AGG | 0.406049 | 8.3:+71451693 | MS.gene074590:CDS |
| ACCCAGAATTACCAGATTCC+TGG | 0.409590 | 8.3:-71453329 | None:intergenic |
| TAGGTCATTGAATTCTTTCT+CGG | 0.411868 | 8.3:-71453193 | None:intergenic |
| TGTCTGTTCTTTATTACTGC+TGG | 0.413181 | 8.3:-71450916 | None:intergenic |
| CTGAGGGATGATCATATATC+AGG | 0.416209 | 8.3:+71455125 | MS.gene074590:CDS |
| CAATGACCTAGAATATGATA+TGG | 0.416299 | 8.3:+71453206 | MS.gene074590:CDS |
| GGCACATTGCTTCTGGAAGA+TGG | 0.416791 | 8.3:-71452130 | None:intergenic |
| TGATGCAGAGATGTCTCAAT+TGG | 0.418080 | 8.3:+71446869 | MS.gene074590:CDS |
| TTCAAAGCTTCAGCTTCTAA+AGG | 0.418516 | 8.3:-71451532 | None:intergenic |
| CCCGAACTCACAGCTGGTTC+AGG | 0.420312 | 8.3:-71452151 | None:intergenic |
| GGAGTAAAAGGGATGAGATT+CGG | 0.421145 | 8.3:+71451647 | MS.gene074590:CDS |
| TATGCTAATGCATCAGCATC+TGG | 0.422062 | 8.3:+71449591 | MS.gene074590:CDS |
| TACACATGTAACGGTACCTT+TGG | 0.422345 | 8.3:+71451735 | MS.gene074590:CDS |
| ATCATTCTCACCCTGGATAA+GGG | 0.424961 | 8.3:-71453591 | None:intergenic |
| TCATTCTGAAGGGAATCTAT+AGG | 0.426226 | 8.3:-71452630 | None:intergenic |
| TGTTCTACGCGTGCATCAAC+AGG | 0.426291 | 8.3:-71452055 | None:intergenic |
| TCAGCTCAGTTTGAAGGTAG+TGG | 0.430622 | 8.3:+71451394 | MS.gene074590:CDS |
| TTGTCCTCTTTGAACTCAGA+TGG | 0.430904 | 8.3:+71453016 | MS.gene074590:CDS |
| GCCTGAACCAGCTGTGAGTT+CGG | 0.430971 | 8.3:+71452150 | MS.gene074590:CDS |
| TTTGGGCTTGGTTATGGGCT+CGG | 0.431092 | 8.3:-71450754 | None:intergenic |
| AATTGTCTCCGAAGCGTTCA+AGG | 0.431518 | 8.3:+71446401 | MS.gene074590:CDS |
| GGTTATAGACCCTGAAAACT+TGG | 0.434505 | 8.3:-71452404 | None:intergenic |
| GAAACCAGTACCTGCTAGTT+CGG | 0.437323 | 8.3:+71451606 | MS.gene074590:CDS |
| GTTAGTCTGAGCCAGGAATC+TGG | 0.439275 | 8.3:+71453318 | MS.gene074590:CDS |
| GACAAATCCTTAAACTCTGC+AGG | 0.444442 | 8.3:-71452998 | None:intergenic |
| CTGTTGAGAGTCCTGTGTCC+TGG | 0.445287 | 8.3:+71453468 | MS.gene074590:CDS |
| AAGATAGTCTTGAGCGGAGT+AGG | 0.448279 | 8.3:+71452368 | MS.gene074590:CDS |
| CTGGAAAGCCGGTCGAGCTT+CGG | 0.449448 | 8.3:+71451048 | MS.gene074590:CDS |
| TGGAACAGAATCAGAGAGTA+AGG | 0.450433 | 8.3:+71451755 | MS.gene074590:CDS |
| TTAAAATGGGCGGGAGGTGC+AGG | 0.455887 | 8.3:-71455101 | None:intergenic |
| TCAGGTACACCTCGCACAAC+AGG | 0.457937 | 8.3:+71452744 | MS.gene074590:CDS |
| AGGAAAAGATGATCTCAAAT+GGG | 0.458016 | 8.3:-71451512 | None:intergenic |
| GTGTCAATGTCACGTCCATC+TGG | 0.458396 | 8.3:+71452768 | MS.gene074590:CDS |
| CTTCATCCTCTTCATTCTGA+AGG | 0.461063 | 8.3:-71452641 | None:intergenic |
| GGAAGATTAGCAACAAGATA+AGG | 0.461444 | 8.3:-71453653 | None:intergenic |
| GCCAGGAATCTGGTAATTCT+GGG | 0.462442 | 8.3:+71453328 | MS.gene074590:CDS |
| AGCTTTGAAGAATCAGGTTA+AGG | 0.464390 | 8.3:+71451546 | MS.gene074590:CDS |
| TGCTGTAAGGCAAAATTTCT+CGG | 0.467310 | 8.3:+71452219 | MS.gene074590:CDS |
| ATGCTAAACTTCAGGAAGAA+TGG | 0.467513 | 8.3:+71452302 | MS.gene074590:CDS |
| GAAGAATCAGGTTAAGGAAG+AGG | 0.467828 | 8.3:+71451552 | MS.gene074590:CDS |
| TTCCAAGCAGGGCTACCAAT+AGG | 0.468469 | 8.3:-71453560 | None:intergenic |
| AGACTTGAGGAAGTCGAGAA+TGG | 0.471343 | 8.3:+71453841 | MS.gene074590:intron |
| GGGGATGGAACAAGAGTAAT+CGG | 0.473196 | 8.3:+71448353 | MS.gene074590:CDS |
| CGCCCTGCCTGTGCCGGCGT+TGG | 0.475839 | 8.3:-71450969 | None:intergenic |
| CAGGACACAGGACTCTCAAC+AGG | 0.476046 | 8.3:-71453467 | None:intergenic |
| CTTGTTCCCCTGTGGCCGTA+TGG | 0.477358 | 8.3:-71453239 | None:intergenic |
| TAGAGAGTTGAAGGTGGTGA+AGG | 0.477976 | 8.3:-71450813 | None:intergenic |
| ATTAAAAGCACTATCTTCAA+TGG | 0.481053 | 8.3:-71453280 | None:intergenic |
| TCTCAACGCGCAGATAAACT+TGG | 0.481664 | 8.3:+71452448 | MS.gene074590:CDS |
| ATGACGATGTTAAGTTTGAT+GGG | 0.482204 | 8.3:+71451302 | MS.gene074590:CDS |
| ATCATCCCTCAGTTTAAAAT+GGG | 0.482489 | 8.3:-71455114 | None:intergenic |
| TTGTCTCTTCGTTTGCCAGA+TGG | 0.487249 | 8.3:-71452783 | None:intergenic |
| TCACCAACGCCGGCACAGGC+AGG | 0.490050 | 8.3:+71450966 | MS.gene074590:CDS |
| TGTTCCGAACTAGCAGGTAC+TGG | 0.490653 | 8.3:-71451610 | None:intergenic |
| GACTTGAGGAAGTCGAGAAT+GGG | 0.491125 | 8.3:+71453842 | MS.gene074590:intron |
| GACATTCTCCGAAGCTCGAC+CGG | 0.494736 | 8.3:-71451056 | None:intergenic |
| GTTACGTTGTAGAGAGTTGA+AGG | 0.495122 | 8.3:-71450822 | None:intergenic |
| CACAGGTTTGTGCGGTATGT+TGG | 0.496046 | 8.3:+71446813 | MS.gene074590:intron |
| GGTGCCGTCGTTATTGCTGT+TGG | 0.497703 | 8.3:-71450895 | None:intergenic |
| AAGGTTGTGAAAACTGATCA+AGG | 0.498183 | 8.3:+71451184 | MS.gene074590:CDS |
| TCCTTTCGTAAACCATGTCT+CGG | 0.500135 | 8.3:-71446686 | None:intergenic |
| GATTCATTCCATACGGCCAC+AGG | 0.500497 | 8.3:+71453231 | MS.gene074590:CDS |
| TTAAAGTTCGCAGAGGGAGC+AGG | 0.501043 | 8.3:+71446612 | MS.gene074590:intron |
| GAGATTGAGTGCAGTTAGGC+AGG | 0.501270 | 8.3:+71449554 | MS.gene074590:CDS |
| GTGGTGGTGCATTCAAATCA+AGG | 0.504288 | 8.3:+71451419 | MS.gene074590:CDS |
| ATGAAAAGTACATGAAGAAG+AGG | 0.505881 | 8.3:+71452278 | MS.gene074590:CDS |
| AAGGTTCTTCTTCATCAGAT+AGG | 0.506149 | 8.3:+71451245 | MS.gene074590:CDS |
| CAAGGGTCTTCTTCTGACGT+GGG | 0.508947 | 8.3:+71451202 | MS.gene074590:CDS |
| GGTGATGACGGCAACGGCGT+CGG | 0.509621 | 8.3:-71450948 | None:intergenic |
| TATCAGGATGAAAGCTTCAA+TGG | 0.510924 | 8.3:+71453161 | MS.gene074590:CDS |
| TGAGTTGAGAGACAGTGGTA+AGG | 0.511353 | 8.3:-71449621 | None:intergenic |
| GAATTTGCTCCAGGCGGGGA+TGG | 0.511390 | 8.3:+71448338 | MS.gene074590:intron |
| ATCCTTAAACTCTGCAGGGT+TGG | 0.511571 | 8.3:-71452993 | None:intergenic |
| TCATTGAAGCTTTCGTCAGA+AGG | 0.512321 | 8.3:-71453882 | None:intergenic |
| CTTTCAACGGTGTAGGATCT+CGG | 0.512825 | 8.3:+71453435 | MS.gene074590:CDS |
| TATTATTACGTCGTTGTTGG+TGG | 0.512881 | 8.3:-71450844 | None:intergenic |
| ATGTGAGATTGAGTGCAGTT+AGG | 0.513110 | 8.3:+71449550 | MS.gene074590:CDS |
| AGTCGTCGCCCTGCCTGTGC+CGG | 0.513589 | 8.3:-71450975 | None:intergenic |
| GTATCAAGGAAGAGAAGCTA+AGG | 0.515763 | 8.3:+71452942 | MS.gene074590:CDS |
| TGGAAAGGTTAGTCTGAGCC+AGG | 0.515819 | 8.3:+71453311 | MS.gene074590:CDS |
| TGTCCTCTTTGAACTCAGAT+GGG | 0.518994 | 8.3:+71453017 | MS.gene074590:CDS |
| GGTTTGCTTACTCCAGAAGA+AGG | 0.522653 | 8.3:-71452861 | None:intergenic |
| CGAGAATGGGATTGTCTCCA+TGG | 0.525896 | 8.3:+71453855 | MS.gene074590:CDS |
| TGGTTGCTACATCACTTGGT+AGG | 0.525917 | 8.3:+71451344 | MS.gene074590:CDS |
| TGAAGAGGAGCAAAGTATCA+AGG | 0.528530 | 8.3:+71452928 | MS.gene074590:intron |
| TGTTCTACGTGCACATCAGC+AGG | 0.530794 | 8.3:-71451980 | None:intergenic |
| ATGGTGCTTCAAAGCAAAGT+AGG | 0.531251 | 8.3:+71452694 | MS.gene074590:CDS |
| TCCCTCAGTTTAAAATGGGC+GGG | 0.532504 | 8.3:-71455110 | None:intergenic |
| CCATCAACTTTCAACGGTGT+AGG | 0.533225 | 8.3:+71453428 | MS.gene074590:CDS |
| TTCTTCGTCTTCGTTATCGA+TGG | 0.536054 | 8.3:-71450730 | None:intergenic |
| TCAAGGGTCTTCTTCTGACG+TGG | 0.536315 | 8.3:+71451201 | MS.gene074590:CDS |
| CAGTTTGAAGGTAGTGGTGG+TGG | 0.536443 | 8.3:+71451400 | MS.gene074590:CDS |
| GGAGTTGAGTCTCCTACTCC+AGG | 0.540927 | 8.3:-71452103 | None:intergenic |
| ACAGATCAGAGAAGGAAGCT+AGG | 0.541744 | 8.3:+71452332 | MS.gene074590:CDS |
| CTACTAACCACTTCCACCGC+CGG | 0.542687 | 8.3:-71451091 | None:intergenic |
| ATTTAAACCAACAACGGAAG+AGG | 0.545934 | 8.3:-71451461 | None:intergenic |
| AGATAGTCTTGAGCGGAGTA+GGG | 0.546356 | 8.3:+71452369 | MS.gene074590:CDS |
| TATCTGCACCTTGAACGCTT+CGG | 0.549264 | 8.3:-71446409 | None:intergenic |
| ACTCTCTGATTCTGTTCCAA+AGG | 0.549401 | 8.3:-71451751 | None:intergenic |
| ATGGTTTGTTCCGAACTAGC+AGG | 0.550367 | 8.3:-71451616 | None:intergenic |
| TTCATCCTCTTCATTCTGAA+GGG | 0.551403 | 8.3:-71452640 | None:intergenic |
| AGTTTGGTACAGACTGCGCA+AGG | 0.553497 | 8.3:-71452809 | None:intergenic |
| TGAAGCTTTCGTCAGAAGGA+TGG | 0.553546 | 8.3:-71453878 | None:intergenic |
| TTTCTCGGAGCTTAATATTG+GGG | 0.555166 | 8.3:+71452234 | MS.gene074590:CDS |
| CAGAGAGTAAGGCAGAGTAA+AGG | 0.556082 | 8.3:+71451766 | MS.gene074590:CDS |
| CAACGGTGTAGGATCTCGGC+AGG | 0.557408 | 8.3:+71453439 | MS.gene074590:CDS |
| GCATTTCCATCAACTTTCAA+CGG | 0.557412 | 8.3:+71453422 | MS.gene074590:CDS |
| AAAAGAAAATACTGGAAAGC+CGG | 0.557438 | 8.3:+71451037 | MS.gene074590:CDS |
| GGTTGCTACATCACTTGGTA+GGG | 0.557575 | 8.3:+71451345 | MS.gene074590:CDS |
| AGGGAACGAGAATTCCAAGC+AGG | 0.560307 | 8.3:-71453572 | None:intergenic |
| TGTGCCGGCGTTGGTGATGA+CGG | 0.562230 | 8.3:-71450960 | None:intergenic |
| ATAACCAGACAAAATTCAGC+AGG | 0.562447 | 8.3:+71452421 | MS.gene074590:CDS |
| ATCCCTCAGTTTAAAATGGG+CGG | 0.563871 | 8.3:-71455111 | None:intergenic |
| TGCTAGTTCGGAACAAACCA+TGG | 0.567133 | 8.3:+71451618 | MS.gene074590:CDS |
| AGAGAAGGAAGCTAGGATGA+AGG | 0.567425 | 8.3:+71452339 | MS.gene074590:CDS |
| TTGAGACATCTCTGCATCAA+AGG | 0.569583 | 8.3:-71446865 | None:intergenic |
| GACCATTTAAAGTTCGCAGA+GGG | 0.570929 | 8.3:+71446606 | MS.gene074590:intron |
| TTAGTCCCCGAACTCACAGC+TGG | 0.572238 | 8.3:-71452157 | None:intergenic |
| TGATAATAATAATTTGGACA+AGG | 0.575415 | 8.3:+71451165 | MS.gene074590:CDS |
| GGCGTTGGTGATGACGGCAA+CGG | 0.575419 | 8.3:-71450954 | None:intergenic |
| TTGCTTCTGGAAGATGGCTG+AGG | 0.575947 | 8.3:-71452124 | None:intergenic |
| TTTGAAGGTAGTGGTGGTGG+TGG | 0.577036 | 8.3:+71451403 | MS.gene074590:CDS |
| CGGAACAAACCATGGGGACA+CGG | 0.578400 | 8.3:+71451626 | MS.gene074590:CDS |
| TTCGTTATCGATGGACATGT+CGG | 0.579689 | 8.3:-71450721 | None:intergenic |
| AGGCCAACCACTGCAGGACC+TGG | 0.582150 | 8.3:+71453123 | MS.gene074590:intron |
| CATGGGGACACGGAGTAAAA+GGG | 0.583032 | 8.3:+71451636 | MS.gene074590:CDS |
| GAGTTTGAACAGATCAGAGA+AGG | 0.583828 | 8.3:+71452324 | MS.gene074590:CDS |
| ATAGCACTGCCTACAAAACC+AGG | 0.584700 | 8.3:-71453141 | None:intergenic |
| AATTCTCGTTCCCTTATCCA+GGG | 0.584993 | 8.3:+71453581 | MS.gene074590:CDS |
| GTCATCACCAACGCCGGCAC+AGG | 0.585521 | 8.3:+71450962 | MS.gene074590:CDS |
| TATGGAAGATTCATTCCATA+CGG | 0.589840 | 8.3:+71453224 | MS.gene074590:CDS |
| TGTACAGGAAGGAACTGCTA+AGG | 0.589887 | 8.3:+71449520 | MS.gene074590:intron |
| AGATTCCCTTCAGAATGAAG+AGG | 0.590406 | 8.3:+71452635 | MS.gene074590:CDS |
| GCACGGAAGATTATATTCGC+AGG | 0.590602 | 8.3:+71446897 | MS.gene074590:CDS |
| AATGTGGTTGCTACATCACT+TGG | 0.594624 | 8.3:+71451340 | MS.gene074590:CDS |
| CACCAACGCCGGCACAGGCA+GGG | 0.597853 | 8.3:+71450967 | MS.gene074590:CDS |
| CAATGTCAGAAGACTCATGC+GGG | 0.600644 | 8.3:-71453520 | None:intergenic |
| ATCTAGAAGACCTGTAATAG+GGG | 0.600753 | 8.3:+71452018 | MS.gene074590:CDS |
| GCTCAGTTTGAAGGTAGTGG+TGG | 0.600840 | 8.3:+71451397 | MS.gene074590:CDS |
| GCGCGTGAGTTCCAGGACAC+AGG | 0.605108 | 8.3:-71453479 | None:intergenic |
| TTCAAGGATCATCAACTGAA+AGG | 0.605231 | 8.3:+71451226 | MS.gene074590:CDS |
| AAGGGTCTTCTTCTGACGTG+GGG | 0.606885 | 8.3:+71451203 | MS.gene074590:CDS |
| AGAATGATGCTGCTCGAATG+AGG | 0.608638 | 8.3:+71453606 | MS.gene074590:CDS |
| TTTGGTACAGACTGCGCAAG+GGG | 0.609859 | 8.3:-71452807 | None:intergenic |
| AAACCAGGTCCTGCAGTGGT+TGG | 0.611843 | 8.3:-71453126 | None:intergenic |
| GCTAGTTCGGAACAAACCAT+GGG | 0.613627 | 8.3:+71451619 | MS.gene074590:CDS |
| AATTCACAGTCTAGAAGACC+TGG | 0.613652 | 8.3:+71452085 | MS.gene074590:CDS |
| GACTAAGTCACTTATGAAGA+CGG | 0.616319 | 8.3:+71452174 | MS.gene074590:CDS |
| ATTCATTCCATACGGCCACA+GGG | 0.617363 | 8.3:+71453232 | MS.gene074590:CDS |
| CAGTCTAGAAGACCTGGAGT+AGG | 0.617843 | 8.3:+71452091 | MS.gene074590:CDS |
| CTGAACCAGCTGTGAGTTCG+GGG | 0.618997 | 8.3:+71452152 | MS.gene074590:CDS |
| GAGCAGCATCATTCTCACCC+TGG | 0.624179 | 8.3:-71453598 | None:intergenic |
| GACGTAGAAATGCCGAGACA+TGG | 0.624776 | 8.3:+71446674 | MS.gene074590:CDS |
| AATTTCATCTTGTTCCCCTG+TGG | 0.625503 | 8.3:-71453247 | None:intergenic |
| ACAAATCCTTAAACTCTGCA+GGG | 0.627468 | 8.3:-71452997 | None:intergenic |
| AACACCATTTAAACCAACAA+CGG | 0.627589 | 8.3:-71451467 | None:intergenic |
| GTACAGGAAGGAACTGCTAA+GGG | 0.628039 | 8.3:+71449521 | MS.gene074590:intron |
| TCAGGATAGTACACATGTAA+CGG | 0.628758 | 8.3:+71451726 | MS.gene074590:CDS |
| AATCCCATCTGAGTTCAAAG+AGG | 0.629072 | 8.3:-71453020 | None:intergenic |
| TGTCTCAATTGGAAGCTGCA+CGG | 0.630977 | 8.3:+71446880 | MS.gene074590:CDS |
| GTGTTTGAGTTGAGAGACAG+TGG | 0.631528 | 8.3:-71449626 | None:intergenic |
| ACCAGACAAAATTCAGCAGG+AGG | 0.636055 | 8.3:+71452424 | MS.gene074590:CDS |
| GTTGATGCACGCGTAGAACA+GGG | 0.637485 | 8.3:+71452058 | MS.gene074590:CDS |
| TTTCGTCAGAAGGATGGCCA+TGG | 0.638942 | 8.3:-71453872 | None:intergenic |
| AGGTTGTGAAAACTGATCAA+GGG | 0.642830 | 8.3:+71451185 | MS.gene074590:CDS |
| GGTGGATAGTCAGAATTATG+GGG | 0.644647 | 8.3:+71452195 | MS.gene074590:CDS |
| AATATTGGGGATGAATCTAG+AGG | 0.645498 | 8.3:+71452247 | MS.gene074590:CDS |
| GTTTGGTACAGACTGCGCAA+GGG | 0.646573 | 8.3:-71452808 | None:intergenic |
| TACAAAACCAGGTCCTGCAG+TGG | 0.648051 | 8.3:-71453130 | None:intergenic |
| AATGAGCTGTTCAACGAACA+CGG | 0.648737 | 8.3:+71453906 | MS.gene074590:CDS |
| GACGATGTTAAGTTTGATGG+GGG | 0.649104 | 8.3:+71451304 | MS.gene074590:CDS |
| ATCAAATATAAAGAGAGACC+AGG | 0.649669 | 8.3:+71452480 | MS.gene074590:CDS |
| TGACGATGTTAAGTTTGATG+GGG | 0.649774 | 8.3:+71451303 | MS.gene074590:CDS |
| GGAAAAGATGATCTCAAATG+GGG | 0.652354 | 8.3:-71451511 | None:intergenic |
| GGGGACAGGAGATCAGCGCA+TGG | 0.661082 | 8.3:+71447024 | MS.gene074590:intron |
| CTCAGTTTAAAATGGGCGGG+AGG | 0.661370 | 8.3:-71455107 | None:intergenic |
| GGGAACGAGAATTCCAAGCA+GGG | 0.661444 | 8.3:-71453571 | None:intergenic |
| TGGTGGTGCATTCAAATCAA+GGG | 0.664398 | 8.3:+71451420 | MS.gene074590:CDS |
| ATGATGCTCACAGGTTTGTG+CGG | 0.666085 | 8.3:+71446805 | MS.gene074590:intron |
| GGACCATTTAAAGTTCGCAG+AGG | 0.667396 | 8.3:+71446605 | MS.gene074590:intron |
| GGGTGTGAAAAGTAATAATG+TGG | 0.669968 | 8.3:+71451324 | MS.gene074590:CDS |
| ACGTTGTAGAGAGTTGAAGG+TGG | 0.671062 | 8.3:-71450819 | None:intergenic |
| GCATGACGAGTTGAAGCTGA+AGG | 0.672898 | 8.3:+71451801 | MS.gene074590:CDS |
| CTGAAATTGGTGATTCTACG+AGG | 0.677991 | 8.3:+71453352 | MS.gene074590:CDS |
| GTTGCCGTCATCACCAACGC+CGG | 0.684269 | 8.3:+71450956 | MS.gene074590:CDS |
| AAAAGGGATGAGATTCGGGG+TGG | 0.686111 | 8.3:+71451652 | MS.gene074590:CDS |
| ATTGACACTCCTGTTGTGCG+AGG | 0.689849 | 8.3:-71452753 | None:intergenic |
| CAATGCAAGATAGTCTTGAG+CGG | 0.692628 | 8.3:+71452362 | MS.gene074590:CDS |
| AAGATCTTGAATGACTACGG+TGG | 0.694140 | 8.3:-71451369 | None:intergenic |
| GTGGATAGTCAGAATTATGG+GGG | 0.696577 | 8.3:+71452196 | MS.gene074590:CDS |
| TTCATTCCATACGGCCACAG+GGG | 0.700611 | 8.3:+71453233 | MS.gene074590:CDS |
| GATCAGCGCATGGATTCACA+AGG | 0.700761 | 8.3:+71447034 | MS.gene074590:CDS |
| TAAGTCACTTATGAAGACGG+TGG | 0.702124 | 8.3:+71452177 | MS.gene074590:CDS |
| AGTAAAAGGGATGAGATTCG+GGG | 0.702463 | 8.3:+71451649 | MS.gene074590:CDS |
| GAAGCCAACAGCAATAACGA+CGG | 0.709829 | 8.3:+71450891 | MS.gene074590:CDS |
| CAAGACGACGAAAAGTCACG+TGG | 0.713674 | 8.3:+71450666 | MS.gene074590:CDS |
| CCCAAGCCCAAACATCCACG+TGG | 0.722286 | 8.3:+71450777 | MS.gene074590:CDS |
| TCAATGTCAGAAGACTCATG+CGG | 0.734206 | 8.3:-71453521 | None:intergenic |
| TGGAACAAGAGTAATCGGAG+CGG | 0.770089 | 8.3:+71448358 | MS.gene074590:CDS |
| CTAGTTCGGAACAAACCATG+GGG | 0.780495 | 8.3:+71451620 | MS.gene074590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 71446364 | 71455161 | 71446364 | ID=MS.gene074590 |
| chr8.3 | mRNA | 71446364 | 71455161 | 71446364 | ID=MS.gene074590.t1;Parent=MS.gene074590 |
| chr8.3 | exon | 71446364 | 71446422 | 71446364 | ID=MS.gene074590.t1.exon1;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71446364 | 71446422 | 71446364 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71446618 | 71446695 | 71446618 | ID=MS.gene074590.t1.exon2;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71446618 | 71446695 | 71446618 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71446818 | 71446918 | 71446818 | ID=MS.gene074590.t1.exon3;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71446818 | 71446918 | 71446818 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71447032 | 71447055 | 71447032 | ID=MS.gene074590.t1.exon4;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71447032 | 71447055 | 71447032 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71448351 | 71448393 | 71448351 | ID=MS.gene074590.t1.exon5;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71448351 | 71448393 | 71448351 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71449527 | 71449664 | 71449527 | ID=MS.gene074590.t1.exon6;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71449527 | 71449664 | 71449527 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71450608 | 71451105 | 71450608 | ID=MS.gene074590.t1.exon7;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71450608 | 71451105 | 71450608 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71451135 | 71451847 | 71451135 | ID=MS.gene074590.t1.exon8;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71451135 | 71451847 | 71451135 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71451963 | 71452501 | 71451963 | ID=MS.gene074590.t1.exon9;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71451963 | 71452501 | 71451963 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71452627 | 71452887 | 71452627 | ID=MS.gene074590.t1.exon10;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71452627 | 71452887 | 71452627 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71452938 | 71453053 | 71452938 | ID=MS.gene074590.t1.exon11;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71452938 | 71453053 | 71452938 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71453125 | 71453373 | 71453125 | ID=MS.gene074590.t1.exon12;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71453125 | 71453373 | 71453125 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71453403 | 71453708 | 71453403 | ID=MS.gene074590.t1.exon13;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71453403 | 71453708 | 71453403 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71453854 | 71453927 | 71453854 | ID=MS.gene074590.t1.exon14;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71453854 | 71453927 | 71453854 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| chr8.3 | exon | 71455078 | 71455161 | 71455078 | ID=MS.gene074590.t1.exon15;Parent=MS.gene074590.t1 |
| chr8.3 | CDS | 71455078 | 71455161 | 71455078 | ID=cds.MS.gene074590.t1;Parent=MS.gene074590.t1 |
| Gene Sequence |
| Protein sequence |
