Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07819.t1 | XP_003627159.1 | 99.4 | 474 | 3 | 0 | 1 | 474 | 1 | 474 | 2.40E-266 | 927.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07819.t1 | Q9CAI5 | 74.6 | 469 | 111 | 6 | 1 | 466 | 1 | 464 | 1.1e-190 | 667.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07819.t1 | G7LI85 | 99.4 | 474 | 3 | 0 | 1 | 474 | 1 | 474 | 1.7e-266 | 927.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene27364 | MS.gene07819 | PPI |
MS.gene07819 | MS.gene025139 | PPI |
MS.gene012266 | MS.gene07819 | PPI |
MS.gene07819 | MS.gene24338 | PPI |
MS.gene57575 | MS.gene07819 | PPI |
MS.gene07819 | MS.gene051853 | PPI |
MS.gene07819 | MS.gene062739 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07819.t1 | MTR_8g018310 | 99.367 | 474 | 3 | 0 | 1 | 474 | 1 | 474 | 0.0 | 972 |
MS.gene07819.t1 | MTR_2g099670 | 83.438 | 477 | 74 | 5 | 1 | 474 | 1 | 475 | 0.0 | 810 |
MS.gene07819.t1 | MTR_8g018310 | 99.471 | 378 | 2 | 0 | 1 | 378 | 1 | 378 | 0.0 | 787 |
MS.gene07819.t1 | MTR_4g126010 | 75.523 | 478 | 89 | 7 | 1 | 474 | 1 | 454 | 0.0 | 694 |
MS.gene07819.t1 | MTR_2g099670 | 81.250 | 416 | 73 | 5 | 62 | 474 | 10 | 423 | 0.0 | 686 |
MS.gene07819.t1 | MTR_2g039930 | 68.723 | 470 | 142 | 4 | 1 | 469 | 1 | 466 | 0.0 | 655 |
MS.gene07819.t1 | MTR_1g069720 | 60.510 | 471 | 159 | 8 | 1 | 465 | 1 | 450 | 0.0 | 547 |
MS.gene07819.t1 | MTR_7g097160 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 541 |
MS.gene07819.t1 | MTR_1g042280 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
MS.gene07819.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 520 |
MS.gene07819.t1 | MTR_2g039930 | 66.324 | 389 | 126 | 4 | 82 | 469 | 1 | 385 | 0.0 | 516 |
MS.gene07819.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 516 |
MS.gene07819.t1 | MTR_6g087070 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.22e-178 | 507 |
MS.gene07819.t1 | MTR_8g102930 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.49e-174 | 496 |
MS.gene07819.t1 | MTR_1g042280 | 79.496 | 278 | 54 | 2 | 40 | 314 | 9 | 286 | 3.49e-168 | 476 |
MS.gene07819.t1 | MTR_3g110180 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 3.64e-162 | 465 |
MS.gene07819.t1 | MTR_0492s0030 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 6.23e-161 | 460 |
MS.gene07819.t1 | MTR_0543s0020 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 6.23e-161 | 460 |
MS.gene07819.t1 | MTR_3g110180 | 65.964 | 332 | 105 | 4 | 1 | 326 | 1 | 330 | 2.52e-160 | 461 |
MS.gene07819.t1 | MTR_1g004990 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 4.31e-160 | 460 |
MS.gene07819.t1 | MTR_1g075870 | 81.250 | 240 | 44 | 1 | 58 | 296 | 2 | 241 | 6.43e-151 | 431 |
MS.gene07819.t1 | MTR_7g097160 | 78.571 | 182 | 30 | 3 | 144 | 318 | 25 | 204 | 2.73e-98 | 299 |
MS.gene07819.t1 | MTR_7g006030 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 6.96e-57 | 199 |
MS.gene07819.t1 | MTR_7g085540 | 38.408 | 289 | 159 | 7 | 4 | 276 | 140 | 425 | 9.64e-57 | 200 |
MS.gene07819.t1 | MTR_1g007150 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 3.07e-56 | 198 |
MS.gene07819.t1 | MTR_3g110240 | 38.951 | 267 | 151 | 6 | 9 | 266 | 121 | 384 | 3.40e-56 | 198 |
MS.gene07819.t1 | MTR_1g116210 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 8.84e-56 | 197 |
MS.gene07819.t1 | MTR_8g014050 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.76e-50 | 182 |
MS.gene07819.t1 | MTR_7g116400 | 58.462 | 65 | 26 | 1 | 82 | 145 | 3 | 67 | 1.85e-18 | 80.5 |
MS.gene07819.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.39e-13 | 73.2 |
MS.gene07819.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.56e-13 | 73.2 |
MS.gene07819.t1 | MTR_5g007590 | 44.595 | 74 | 33 | 1 | 72 | 145 | 54 | 119 | 1.31e-12 | 65.1 |
MS.gene07819.t1 | MTR_4g128820 | 31.447 | 159 | 98 | 5 | 1 | 153 | 2 | 155 | 6.55e-12 | 67.8 |
MS.gene07819.t1 | MTR_3g466400 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 1.31e-11 | 67.0 |
MS.gene07819.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 6.54e-11 | 65.1 |
MS.gene07819.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 6.85e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07819.t1 | AT1G72710 | 76.383 | 470 | 103 | 6 | 1 | 467 | 1 | 465 | 0.0 | 710 |
MS.gene07819.t1 | AT4G26100 | 69.767 | 473 | 113 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
MS.gene07819.t1 | AT5G57015 | 69.328 | 476 | 102 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
MS.gene07819.t1 | AT2G19470 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 574 |
MS.gene07819.t1 | AT1G03930 | 60.759 | 474 | 174 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
MS.gene07819.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
MS.gene07819.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
MS.gene07819.t1 | AT3G23340 | 63.571 | 420 | 139 | 6 | 1 | 419 | 1 | 407 | 0.0 | 531 |
MS.gene07819.t1 | AT4G28540 | 61.124 | 445 | 136 | 10 | 1 | 426 | 5 | 431 | 0.0 | 521 |
MS.gene07819.t1 | AT5G43320 | 56.701 | 485 | 185 | 9 | 1 | 469 | 1 | 476 | 0.0 | 518 |
MS.gene07819.t1 | AT4G14340 | 63.107 | 412 | 136 | 6 | 1 | 410 | 7 | 404 | 0.0 | 518 |
MS.gene07819.t1 | AT4G14340 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
MS.gene07819.t1 | AT1G04440 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 2.51e-179 | 510 |
MS.gene07819.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 3.20e-177 | 501 |
MS.gene07819.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 3.20e-177 | 501 |
MS.gene07819.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.36e-176 | 500 |
MS.gene07819.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.36e-176 | 500 |
MS.gene07819.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.36e-176 | 500 |
MS.gene07819.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.36e-176 | 500 |
MS.gene07819.t1 | AT3G23340 | 62.750 | 400 | 135 | 6 | 21 | 419 | 7 | 393 | 5.89e-175 | 498 |
MS.gene07819.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 3.18e-172 | 489 |
MS.gene07819.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 9.73e-172 | 489 |
MS.gene07819.t1 | AT4G08800 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.32e-153 | 437 |
MS.gene07819.t1 | AT2G25760 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 3.95e-61 | 211 |
MS.gene07819.t1 | AT2G25760 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.57e-58 | 203 |
MS.gene07819.t1 | AT3G03940 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.03e-56 | 198 |
MS.gene07819.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.70e-56 | 198 |
MS.gene07819.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.70e-56 | 198 |
MS.gene07819.t1 | AT3G13670 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.03e-54 | 194 |
MS.gene07819.t1 | AT2G17890 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 8.27e-13 | 70.9 |
MS.gene07819.t1 | AT3G50530 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 6.18e-12 | 68.2 |
MS.gene07819.t1 | AT5G39440 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.66e-11 | 66.2 |
MS.gene07819.t1 | AT3G29160 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.16e-11 | 64.3 |
MS.gene07819.t1 | AT3G06030 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.19e-11 | 65.1 |
Find 113 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATCAAACATAAATAATT+TGG | 0.143188 | 8.3:-72306529 | MS.gene07819:CDS |
GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8.3:-72309822 | MS.gene07819:CDS |
ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8.3:-72310025 | MS.gene07819:CDS |
TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8.3:+72310992 | None:intergenic |
GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8.3:-72307456 | MS.gene07819:CDS |
AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8.3:-72311118 | MS.gene07819:CDS |
CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8.3:-72307703 | MS.gene07819:CDS |
ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8.3:-72309821 | MS.gene07819:CDS |
GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8.3:-72307455 | MS.gene07819:CDS |
ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8.3:-72308630 | MS.gene07819:intron |
AAGATTCCATCATTAGCAAT+AGG | 0.383044 | 8.3:+72307393 | None:intergenic |
ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8.3:+72308153 | None:intergenic |
TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8.3:-72308385 | MS.gene07819:intron |
TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8.3:-72306740 | MS.gene07819:CDS |
CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8.3:-72307715 | MS.gene07819:intron |
CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8.3:-72308163 | MS.gene07819:CDS |
AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8.3:+72307880 | None:intergenic |
CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8.3:+72308084 | None:intergenic |
GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8.3:-72311163 | None:intergenic |
ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8.3:+72309625 | None:intergenic |
AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8.3:-72306513 | MS.gene07819:CDS |
GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8.3:-72308636 | MS.gene07819:CDS |
TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8.3:-72311144 | MS.gene07819:CDS |
ACACCGGACCATTTCACATT+CGG | 0.447768 | 8.3:+72310101 | None:intergenic |
CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8.3:+72307335 | None:intergenic |
ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8.3:+72310277 | None:intergenic |
AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8.3:-72307878 | MS.gene07819:CDS |
TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8.3:+72310269 | None:intergenic |
TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8.3:-72307399 | MS.gene07819:CDS |
TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8.3:+72310270 | None:intergenic |
ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8.3:-72310062 | MS.gene07819:CDS |
CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8.3:-72307354 | MS.gene07819:CDS |
GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8.3:-72308313 | MS.gene07819:intron |
CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8.3:-72310109 | MS.gene07819:CDS |
GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8.3:-72307664 | MS.gene07819:intron |
CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8.3:-72307417 | MS.gene07819:CDS |
CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8.3:+72307354 | None:intergenic |
ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8.3:-72311145 | MS.gene07819:CDS |
GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8.3:-72306558 | MS.gene07819:CDS |
CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8.3:+72307355 | None:intergenic |
TCTTATGCTTGCCGATCAAA+TGG | 0.495084 | 8.3:-72309982 | MS.gene07819:intron |
CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8.3:-72307673 | MS.gene07819:CDS |
AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8.3:-72308510 | MS.gene07819:CDS |
GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8.3:-72308389 | MS.gene07819:intron |
TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8.3:-72306732 | MS.gene07819:CDS |
CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8.3:-72309639 | MS.gene07819:intron |
TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8.3:-72310048 | MS.gene07819:CDS |
CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8.3:+72311151 | None:intergenic |
AGCAGCCGCGATGCAGCTGT+TGG | 0.504156 | 8.3:-72306684 | MS.gene07819:CDS |
TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8.3:+72306550 | None:intergenic |
AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8.3:-72309828 | MS.gene07819:CDS |
TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8.3:-72309688 | MS.gene07819:CDS |
TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8.3:+72310038 | None:intergenic |
GCCCTCCTCTCGTCCTCTCA+CGG | 0.523511 | 8.3:-72306649 | MS.gene07819:CDS |
CTCACGGTGGATTCAAGTCT+AGG | 0.528411 | 8.3:-72306633 | MS.gene07819:CDS |
GGAGCAGTCCGTAAAAGCTC+TGG | 0.531646 | 8.3:-72306612 | MS.gene07819:CDS |
AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8.3:+72309825 | None:intergenic |
AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8.3:-72307337 | MS.gene07819:intron |
TGCAGCTGTTGGCAGTGAGA+CGG | 0.540876 | 8.3:-72306673 | MS.gene07819:CDS |
AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8.3:-72309829 | MS.gene07819:CDS |
TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8.3:+72310039 | None:intergenic |
TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8.3:-72308384 | MS.gene07819:intron |
AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8.3:+72308075 | None:intergenic |
CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8.3:-72308089 | MS.gene07819:intron |
CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8.3:-72308673 | MS.gene07819:CDS |
GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8.3:+72308175 | None:intergenic |
TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8.3:-72307468 | MS.gene07819:intron |
CACCGTGAGAGGACGAGAGG+AGG | 0.566871 | 8.3:+72306647 | None:intergenic |
GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8.3:-72310095 | MS.gene07819:CDS |
TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8.3:+72307416 | None:intergenic |
AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8.3:-72306580 | MS.gene07819:CDS |
AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8.3:-72310072 | MS.gene07819:CDS |
ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8.3:+72307401 | None:intergenic |
AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8.3:+72309971 | None:intergenic |
CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8.3:-72308372 | MS.gene07819:CDS |
AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8.3:-72308672 | MS.gene07819:CDS |
CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8.3:-72308530 | MS.gene07819:intron |
CTTTGCTAGTCTCTCTGTCG+TGG | 0.590086 | 8.3:-72308203 | MS.gene07819:intron |
ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8.3:-72310104 | MS.gene07819:CDS |
ACCGTGAGAGGACGAGAGGA+GGG | 0.593807 | 8.3:+72306648 | None:intergenic |
ACCATCACTTACAATACCAC+GGG | 0.602147 | 8.3:+72307812 | None:intergenic |
TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8.3:-72308529 | MS.gene07819:intron |
CACCATCACTTACAATACCA+CGG | 0.605886 | 8.3:+72307811 | None:intergenic |
GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8.3:+72307356 | None:intergenic |
CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8.3:-72307428 | MS.gene07819:CDS |
AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8.3:-72310248 | MS.gene07819:CDS |
ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8.3:-72307828 | MS.gene07819:CDS |
CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8.3:+72308372 | None:intergenic |
GTCTGCATTTAAATGATGAG+AGG | 0.618334 | 8.3:-72306482 | MS.gene07819:CDS |
TCTGCATTTAAATGATGAGA+GGG | 0.619570 | 8.3:-72306481 | MS.gene07819:CDS |
CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8.3:+72307417 | None:intergenic |
TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8.3:-72308154 | MS.gene07819:CDS |
AGACTTGAATCCACCGTGAG+AGG | 0.623415 | 8.3:+72306636 | None:intergenic |
TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8.3:-72306722 | MS.gene07819:CDS |
ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8.3:-72309818 | MS.gene07819:CDS |
CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8.3:+72307819 | None:intergenic |
AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8.3:+72307824 | None:intergenic |
AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8.3:+72308176 | None:intergenic |
GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8.3:+72308514 | None:intergenic |
TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8.3:-72306717 | MS.gene07819:CDS |
TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8.3:+72307676 | None:intergenic |
TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8.3:-72307464 | MS.gene07819:CDS |
GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8.3:+72307691 | None:intergenic |
GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8.3:+72310085 | None:intergenic |
ATCCACCGTGAGAGGACGAG+AGG | 0.659885 | 8.3:+72306644 | None:intergenic |
CTCCTCTCGTCCTCTCACGG+TGG | 0.663120 | 8.3:-72306646 | MS.gene07819:CDS |
GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8.3:+72310060 | None:intergenic |
TCACTTACAATACCACGGGA+AGG | 0.675431 | 8.3:+72307816 | None:intergenic |
CACTGCCAACAGCTGCATCG+CGG | 0.679863 | 8.3:+72306679 | None:intergenic |
GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8.3:-72310099 | MS.gene07819:CDS |
CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8.3:+72309814 | None:intergenic |
AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8.3:-72307452 | MS.gene07819:CDS |
CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8.3:-72310245 | MS.gene07819:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCCAAAAATAAAATATAAAT+AGG | + | chr8.3:72309579-72309598 | None:intergenic | 10.0% |
!!! | TATAATTTTTTTAGATCATT+TGG | - | chr8.3:72308541-72308560 | MS.gene07819:intron | 10.0% |
!!! | TCCTATTTATATTTTATTTT+TGG | - | chr8.3:72309575-72309594 | MS.gene07819:intron | 10.0% |
!!! | TTAAGTTATTTAATTTTTAG+TGG | - | chr8.3:72309875-72309894 | MS.gene07819:CDS | 10.0% |
!!! | TTTTTATTCTTTTGAATTTT+TGG | - | chr8.3:72306717-72306736 | MS.gene07819:CDS | 10.0% |
!! | AAAAACTAATTGATACTTAA+TGG | + | chr8.3:72308639-72308658 | None:intergenic | 15.0% |
!! | AAAATATAAATAGGAAAACA+AGG | + | chr8.3:72309570-72309589 | None:intergenic | 15.0% |
!! | AAATAAAGTAATGATTGATT+AGG | - | chr8.3:72307051-72307070 | MS.gene07819:intron | 15.0% |
!! | ATTTATTCAATTTCTGTAAT+AGG | - | chr8.3:72307602-72307621 | MS.gene07819:intron | 15.0% |
!! | GATAACCAAAATAATATTAA+AGG | + | chr8.3:72308518-72308537 | None:intergenic | 15.0% |
!! | GTGAATAAAAAGTTATTAAA+AGG | - | chr8.3:72308733-72308752 | MS.gene07819:intron | 15.0% |
!!! | AAAAAATTAAAGTTTTGTCT+TGG | - | chr8.3:72310537-72310556 | MS.gene07819:intron | 15.0% |
!!! | AATGATTTTAAAAGACATAA+TGG | + | chr8.3:72309386-72309405 | None:intergenic | 15.0% |
!!! | TCATTTTCTTTTTCAAAATT+CGG | + | chr8.3:72306684-72306703 | None:intergenic | 15.0% |
!!! | TGAATCCTTTAATATTATTT+TGG | - | chr8.3:72308510-72308529 | MS.gene07819:CDS | 15.0% |
!!! | TTTTGTAAAATCTATTATCA+TGG | - | chr8.3:72308112-72308131 | MS.gene07819:CDS | 15.0% |
!!! | TTTTGTTGTTTTGAATTTTA+GGG | - | chr8.3:72306584-72306603 | MS.gene07819:CDS | 15.0% |
!!! | TTTTTGTTGTTTTGAATTTT+AGG | - | chr8.3:72306583-72306602 | MS.gene07819:CDS | 15.0% |
!! | AATAAATAATCGTAAAGACT+AGG | + | chr8.3:72308836-72308855 | None:intergenic | 20.0% |
!! | AGTTATTATGTTTGTAAGTA+TGG | + | chr8.3:72308456-72308475 | None:intergenic | 20.0% |
!! | CACATCAAACATAAATAATT+TGG | - | chr8.3:72311098-72311117 | MS.gene07819:intron | 20.0% |
!! | GAATTTATGCCAATTAAATT+TGG | - | chr8.3:72308757-72308776 | MS.gene07819:intron | 20.0% |
!! | TAAATTTACCAACTGATATT+TGG | - | chr8.3:72307131-72307150 | MS.gene07819:intron | 20.0% |
!! | TAACAAATGAAAATCATTCA+AGG | + | chr8.3:72310112-72310131 | None:intergenic | 20.0% |
!! | TGTCAAATGCTAAATAATAA+AGG | + | chr8.3:72309188-72309207 | None:intergenic | 20.0% |
!!! | ATTTTTGTTTTGTTTGATTC+AGG | - | chr8.3:72307315-72307334 | MS.gene07819:intron | 20.0% |
!!! | CAAAACTTTAATTTTTTCCT+TGG | + | chr8.3:72310534-72310553 | None:intergenic | 20.0% |
!!! | CATTTGACATATCTTTTAAT+TGG | - | chr8.3:72309199-72309218 | MS.gene07819:intron | 20.0% |
!!! | CATTTTCTTTTTCAAAATTC+GGG | + | chr8.3:72306683-72306702 | None:intergenic | 20.0% |
!!! | GTTCTTATGTATTTTTTAAG+AGG | - | chr8.3:72309144-72309163 | MS.gene07819:intron | 20.0% |
!!! | TAATTTTTTCCTTGGATAAA+GGG | + | chr8.3:72310526-72310545 | None:intergenic | 20.0% |
!!! | TCAATAACAACAAAAGTATT+CGG | + | chr8.3:72306755-72306774 | None:intergenic | 20.0% |
!!! | TTAAAATCATTGTTGATTGT+GGG | - | chr8.3:72309395-72309414 | MS.gene07819:intron | 20.0% |
!!! | TTAATTTTTTCCTTGGATAA+AGG | + | chr8.3:72310527-72310546 | None:intergenic | 20.0% |
!!! | TTATGTATTTTTTAAGAGGA+AGG | - | chr8.3:72309148-72309167 | MS.gene07819:intron | 20.0% |
!!! | TTTAAAATCATTGTTGATTG+TGG | - | chr8.3:72309394-72309413 | MS.gene07819:intron | 20.0% |
!!! | TTTTTTCTTTGTCATAGTTT+AGG | - | chr8.3:72309662-72309681 | MS.gene07819:CDS | 20.0% |
! | AAAGAGAAGTTAAAACAACA+AGG | + | chr8.3:72309992-72310011 | None:intergenic | 25.0% |
! | AAATCAATGGCTATTAAGAA+AGG | + | chr8.3:72309053-72309072 | None:intergenic | 25.0% |
! | AATACACAAATTCACTAAGT+TGG | + | chr8.3:72307418-72307437 | None:intergenic | 25.0% |
! | AATCAATGGCTATTAAGAAA+GGG | + | chr8.3:72309052-72309071 | None:intergenic | 25.0% |
! | ATACACAAATTCACTAAGTT+GGG | + | chr8.3:72307417-72307436 | None:intergenic | 25.0% |
! | ATCACAAAAATGCAAGAAAT+TGG | + | chr8.3:72306562-72306581 | None:intergenic | 25.0% |
! | ATTGGATACTCTTTCTTATT+TGG | - | chr8.3:72309217-72309236 | MS.gene07819:intron | 25.0% |
! | CAATATTTCCAAATATCAGT+TGG | + | chr8.3:72307142-72307161 | None:intergenic | 25.0% |
! | CCAATGAAACCAAATTTAAT+TGG | + | chr8.3:72308769-72308788 | None:intergenic | 25.0% |
! | GCTATCATGAATTATTTATG+TGG | - | chr8.3:72308165-72308184 | MS.gene07819:CDS | 25.0% |
! | TACAAGGTTATCTGTTTATA+TGG | - | chr8.3:72310804-72310823 | MS.gene07819:intron | 25.0% |
! | TAGACTTCATATTACTTACT+TGG | - | chr8.3:72307458-72307477 | MS.gene07819:CDS | 25.0% |
! | TATAACTTCAAATACCAAAC+CGG | + | chr8.3:72307089-72307108 | None:intergenic | 25.0% |
! | TATGATAACTATACAACACA+CGG | + | chr8.3:72310757-72310776 | None:intergenic | 25.0% |
! | TATGGGATATTGAATTTCAT+TGG | - | chr8.3:72306871-72306890 | MS.gene07819:intron | 25.0% |
! | TCAGTTAAGTTAATGATTAC+TGG | - | chr8.3:72307024-72307043 | MS.gene07819:intron | 25.0% |
! | TCCAACATCATATATGATTA+AGG | - | chr8.3:72310437-72310456 | MS.gene07819:intron | 25.0% |
! | TCCTTAATCATATATGATGT+TGG | + | chr8.3:72310441-72310460 | None:intergenic | 25.0% |
! | TTAGAAACCAACAAAAGAAA+TGG | + | chr8.3:72310569-72310588 | None:intergenic | 25.0% |
! | TTATTGAAGTTTGATGAGAA+GGG | - | chr8.3:72306768-72306787 | MS.gene07819:intron | 25.0% |
! | TTCATATTTGCCTATTATGT+AGG | - | chr8.3:72307920-72307939 | MS.gene07819:intron | 25.0% |
! | TTCTTCATTTGTCTGAATAT+TGG | + | chr8.3:72306638-72306657 | None:intergenic | 25.0% |
! | TTGAGACATTATAAGAAAAC+TGG | + | chr8.3:72307711-72307730 | None:intergenic | 25.0% |
! | TTGATTGTATACCTATTACA+TGG | + | chr8.3:72308571-72308590 | None:intergenic | 25.0% |
! | TTGTATAAACTTAATCAGCA+GGG | + | chr8.3:72310789-72310808 | None:intergenic | 25.0% |
!! | ACAAAATAAGAAAGCATGAT+AGG | + | chr8.3:72308098-72308117 | None:intergenic | 25.0% |
!! | CAAAATAAGAAAGCATGATA+GGG | + | chr8.3:72308097-72308116 | None:intergenic | 25.0% |
!! | CCAATTAAATTTGGTTTCAT+TGG | - | chr8.3:72308766-72308785 | MS.gene07819:intron | 25.0% |
!! | CTTAGTGAATTTGTGTATTT+TGG | - | chr8.3:72307419-72307438 | MS.gene07819:CDS | 25.0% |
!! | TTTGAAACAAAGAGTTGTAT+AGG | - | chr8.3:72306845-72306864 | MS.gene07819:intron | 25.0% |
!! | TTTTCTGATTTTATTCAGCA+TGG | - | chr8.3:72308031-72308050 | MS.gene07819:intron | 25.0% |
!!! | ATACCAAGTCATTTTTACAT+CGG | - | chr8.3:72307770-72307789 | MS.gene07819:intron | 25.0% |
!!! | CATTTTCAGGTAAAAATCAA+TGG | + | chr8.3:72309066-72309085 | None:intergenic | 25.0% |
!!! | TGGCTTAAATGTTTTTTGTT+GGG | - | chr8.3:72307478-72307497 | MS.gene07819:intron | 25.0% |
!!! | TTAATTTGTGTTTTTGTTGC+AGG | - | chr8.3:72306610-72306629 | MS.gene07819:CDS | 25.0% |
!!! | TTGGCTTAAATGTTTTTTGT+TGG | - | chr8.3:72307477-72307496 | MS.gene07819:intron | 25.0% |
AAAGAGTTGTATAGGCAATA+TGG | - | chr8.3:72306853-72306872 | MS.gene07819:intron | 30.0% | |
AAGAAAATAGAATCAATGCC+AGG | + | chr8.3:72308319-72308338 | None:intergenic | 30.0% | |
AAGAGTTGTATAGGCAATAT+GGG | - | chr8.3:72306854-72306873 | MS.gene07819:intron | 30.0% | |
AAGATTCCATCATTAGCAAT+AGG | + | chr8.3:72310237-72310256 | None:intergenic | 30.0% | |
AAGCTGTATAAAATACTGCA+AGG | - | chr8.3:72307379-72307398 | MS.gene07819:CDS | 30.0% | |
AAGTATGAAGCAAATTCTGA+GGG | + | chr8.3:72309454-72309473 | None:intergenic | 30.0% | |
AAGTTCACATATCATGTCAT+CGG | - | chr8.3:72311047-72311066 | MS.gene07819:intron | 30.0% | |
AATCATATATGATGTTGGAC+AGG | + | chr8.3:72310436-72310455 | None:intergenic | 30.0% | |
AATCGAAGACATAATCAAAC+TGG | + | chr8.3:72309750-72309769 | None:intergenic | 30.0% | |
AATGGATCTTAGTTCAAACA+AGG | + | chr8.3:72308429-72308448 | None:intergenic | 30.0% | |
AATTGATACATAACAAGCGT+TGG | + | chr8.3:72307901-72307920 | None:intergenic | 30.0% | |
ACCATTAAACTCAGTAGTAT+GGG | + | chr8.3:72310679-72310698 | None:intergenic | 30.0% | |
AGGTAATTAGATGATTGATC+AGG | - | chr8.3:72306966-72306985 | MS.gene07819:intron | 30.0% | |
AGTTTGATTATGTCTTCGAT+TGG | - | chr8.3:72309749-72309768 | MS.gene07819:intron | 30.0% | |
ATAACTTATGTTGCTGTAAG+TGG | - | chr8.3:72308874-72308893 | MS.gene07819:intron | 30.0% | |
ATCATGGAAAATCCTATATC+TGG | - | chr8.3:72308128-72308147 | MS.gene07819:CDS | 30.0% | |
ATGAATACTCATCTTGGAAT+TGG | - | chr8.3:72308997-72309016 | MS.gene07819:intron | 30.0% | |
ATGATAGGGAATATATCGAT+GGG | + | chr8.3:72308083-72308102 | None:intergenic | 30.0% | |
ATGATGTACACCTACATAAT+AGG | + | chr8.3:72307933-72307952 | None:intergenic | 30.0% | |
ATTACAAGCTTATGCAATAC+AGG | + | chr8.3:72307679-72307698 | None:intergenic | 30.0% | |
CTTCATACTTCCATTATTGT+CGG | - | chr8.3:72309464-72309483 | MS.gene07819:intron | 30.0% | |
CTTGTATAAACTTAATCAGC+AGG | + | chr8.3:72310790-72310809 | None:intergenic | 30.0% | |
GAAAAGATGGTAGGAATATT+GGG | - | chr8.3:72310172-72310191 | MS.gene07819:intron | 30.0% | |
GAAAGTTTCTACATCTATTG+AGG | - | chr8.3:72309314-72309333 | MS.gene07819:intron | 30.0% | |
GAGTTTAATGGTGTGAATAT+TGG | - | chr8.3:72310687-72310706 | MS.gene07819:intron | 30.0% | |
GATTACTACTATTTAGTAGG+AGG | - | chr8.3:72308194-72308213 | MS.gene07819:CDS | 30.0% | |
GCTGATTACTACTATTTAGT+AGG | - | chr8.3:72308191-72308210 | MS.gene07819:CDS | 30.0% | |
GTTATTGAAGTTTGATGAGA+AGG | - | chr8.3:72306767-72306786 | MS.gene07819:intron | 30.0% | |
TAATCGATACTTCGATTACA+AGG | + | chr8.3:72306939-72306958 | None:intergenic | 30.0% | |
TACATCTATTGAGGTATGAT+TGG | - | chr8.3:72309323-72309342 | MS.gene07819:intron | 30.0% | |
TATCGAGTTCGAATTTCTTT+CGG | - | chr8.3:72310887-72310906 | MS.gene07819:intron | 30.0% | |
TATTGAAGTTTGATGAGAAG+GGG | - | chr8.3:72306769-72306788 | MS.gene07819:intron | 30.0% | |
TCTGCATTTAAATGATGAGA+GGG | - | chr8.3:72311146-72311165 | MS.gene07819:CDS | 30.0% | |
TGAATAAATCCTCAAGACTA+GGG | + | chr8.3:72307591-72307610 | None:intergenic | 30.0% | |
TGATTAACCAAGTCTGATTA+TGG | + | chr8.3:72307007-72307026 | None:intergenic | 30.0% | |
TTACAAGCTTATGCAATACA+GGG | + | chr8.3:72307678-72307697 | None:intergenic | 30.0% | |
TTGAATAAATCCTCAAGACT+AGG | + | chr8.3:72307592-72307611 | None:intergenic | 30.0% | |
TTGCTTCATACAACAATTGA+GGG | + | chr8.3:72307360-72307379 | None:intergenic | 30.0% | |
TTTGCTTCATACAACAATTG+AGG | + | chr8.3:72307361-72307380 | None:intergenic | 30.0% | |
! | AAAATCCTATATCTGGAATC+TGG | - | chr8.3:72308135-72308154 | MS.gene07819:CDS | 30.0% |
! | AACCTAAACTATGGTTTTCA+AGG | + | chr8.3:72309617-72309636 | None:intergenic | 30.0% |
! | AGCAAAAAACTCACATTTTC+AGG | + | chr8.3:72309079-72309098 | None:intergenic | 30.0% |
! | ATGGTGCGTGTTTTATATAT+GGG | - | chr8.3:72310309-72310328 | MS.gene07819:intron | 30.0% |
! | ATTCCCTATAGGTACTTTTA+TGG | - | chr8.3:72307999-72308018 | MS.gene07819:intron | 30.0% |
! | CTGCTGATTAAGTTTATACA+AGG | - | chr8.3:72310788-72310807 | MS.gene07819:intron | 30.0% |
! | CTTTTCAGATAAGCATAATC+TGG | + | chr8.3:72309511-72309530 | None:intergenic | 30.0% |
! | TATGGTGCGTGTTTTATATA+TGG | - | chr8.3:72310308-72310327 | MS.gene07819:intron | 30.0% |
! | TTTGTTGGGTTTCTTTTCTT+TGG | - | chr8.3:72307492-72307511 | MS.gene07819:intron | 30.0% |
!! | ATGCCATAAAAGTACCTATA+GGG | + | chr8.3:72308005-72308024 | None:intergenic | 30.0% |
!! | TCATAGTTTAGGTTCTAGAT+GGG | - | chr8.3:72309673-72309692 | MS.gene07819:CDS | 30.0% |
!! | TCTTTTGGAGAGATCTATTT+AGG | - | chr8.3:72306524-72306543 | MS.gene07819:CDS | 30.0% |
!!! | TACCAAGTCATTTTTACATC+GGG | - | chr8.3:72307771-72307790 | MS.gene07819:intron | 30.0% |
!!! | TACCAGTGCATTTTTTAATG+TGG | - | chr8.3:72310130-72310149 | MS.gene07819:intron | 30.0% |
AACATCCAGATTCCAGATAT+AGG | + | chr8.3:72308143-72308162 | None:intergenic | 35.0% | |
AATTTGGATTCAACGCTTAG+AGG | - | chr8.3:72311114-72311133 | MS.gene07819:CDS | 35.0% | |
ACAATTTCCTCATGGGTTTA+GGG | - | chr8.3:72307806-72307825 | MS.gene07819:intron | 35.0% | |
ACATAATCAAACTGGAATCC+TGG | + | chr8.3:72309742-72309761 | None:intergenic | 35.0% | |
ACCCATACTACTGAGTTTAA+TGG | - | chr8.3:72310675-72310694 | MS.gene07819:intron | 35.0% | |
AGAGAGAATAAGAATCTGAC+GGG | - | chr8.3:72308955-72308974 | MS.gene07819:intron | 35.0% | |
AGATTCTTATTCTCTCTGCA+AGG | + | chr8.3:72308952-72308971 | None:intergenic | 35.0% | |
AGGCAAATAACTTAACGAAC+TGG | + | chr8.3:72308388-72308407 | None:intergenic | 35.0% | |
ATTGGAAATAAGTTCCGTCT+TGG | - | chr8.3:72306482-72306501 | MS.gene07819:CDS | 35.0% | |
CACCACATTAAAAAATGCAC+TGG | + | chr8.3:72310135-72310154 | None:intergenic | 35.0% | |
CACCATTAAACTCAGTAGTA+TGG | + | chr8.3:72310680-72310699 | None:intergenic | 35.0% | |
CAGAGAGAATAAGAATCTGA+CGG | - | chr8.3:72308954-72308973 | MS.gene07819:intron | 35.0% | |
CATGATAGGGAATATATCGA+TGG | + | chr8.3:72308084-72308103 | None:intergenic | 35.0% | |
CATTTGGACATCCATGTAAT+AGG | - | chr8.3:72308557-72308576 | MS.gene07819:intron | 35.0% | |
CCACTTACAAATGACTTAAC+CGG | - | chr8.3:72310273-72310292 | MS.gene07819:CDS | 35.0% | |
CGGTTAAGTCATTTGTAAGT+GGG | + | chr8.3:72310275-72310294 | None:intergenic | 35.0% | |
CTGTATAAAATACTGCAAGG+AGG | - | chr8.3:72307382-72307401 | MS.gene07819:CDS | 35.0% | |
GAAGTATGAAGCAAATTCTG+AGG | + | chr8.3:72309455-72309474 | None:intergenic | 35.0% | |
GATTCTTATTCTCTCTGCAA+GGG | + | chr8.3:72308951-72308970 | None:intergenic | 35.0% | |
GCTAGTATGAATACTCATCT+TGG | - | chr8.3:72308991-72309010 | MS.gene07819:intron | 35.0% | |
GGAAAAGATGGTAGGAATAT+TGG | - | chr8.3:72310171-72310190 | MS.gene07819:intron | 35.0% | |
GGCTAACAAAACTATCATCA+AGG | + | chr8.3:72308408-72308427 | None:intergenic | 35.0% | |
GGTTAAGTCATTTGTAAGTG+GGG | + | chr8.3:72310274-72310293 | None:intergenic | 35.0% | |
GTAATCACCATAATCAGACT+TGG | - | chr8.3:72306997-72307016 | MS.gene07819:intron | 35.0% | |
GTCCTTGAAAACCATAGTTT+AGG | - | chr8.3:72309612-72309631 | MS.gene07819:intron | 35.0% | |
GTCTGCATTTAAATGATGAG+AGG | - | chr8.3:72311145-72311164 | MS.gene07819:CDS | 35.0% | |
GTTTGTAAGTATGGCATCAA+TGG | + | chr8.3:72308447-72308466 | None:intergenic | 35.0% | |
TGATAGGGAATATATCGATG+GGG | + | chr8.3:72308082-72308101 | None:intergenic | 35.0% | |
TGTTTCTTCCAGATGATACT+CGG | + | chr8.3:72311080-72311099 | None:intergenic | 35.0% | |
TTGGAAATAAGTTCCGTCTT+GGG | - | chr8.3:72306483-72306502 | MS.gene07819:CDS | 35.0% | |
TTTAATAGAGCAAAGCCGTA+GGG | - | chr8.3:72309098-72309117 | MS.gene07819:intron | 35.0% | |
! | AACTAATTTTGAGCTTTGCG+CGG | - | chr8.3:72308271-72308290 | MS.gene07819:intron | 35.0% |
! | GATTAGGTGATGTTGATTAC+CGG | - | chr8.3:72307067-72307086 | MS.gene07819:intron | 35.0% |
! | GTGCATTCCATTTCTTTTGT+TGG | - | chr8.3:72310559-72310578 | MS.gene07819:intron | 35.0% |
! | GTTGGTTTCTAAATGTAAGC+AGG | - | chr8.3:72310577-72310596 | MS.gene07819:intron | 35.0% |
! | GTTTTCGATACTGAACTTGT+TGG | - | chr8.3:72306903-72306922 | MS.gene07819:intron | 35.0% |
! | TACCAATTTTTCTCCCAAGA+CGG | + | chr8.3:72306499-72306518 | None:intergenic | 35.0% |
!! | ACCATAGTTTAGGTTCTAGA+TGG | - | chr8.3:72309622-72309641 | MS.gene07819:intron | 35.0% |
!! | ATCCTTGTGATGGATTTACT+TGG | - | chr8.3:72307565-72307584 | MS.gene07819:intron | 35.0% |
!! | CCATAGTTTAGGTTCTAGAT+GGG | - | chr8.3:72309623-72309642 | MS.gene07819:intron | 35.0% |
!! | GATGCCATAAAAGTACCTAT+AGG | + | chr8.3:72308006-72308025 | None:intergenic | 35.0% |
!! | GTCATAGTTTAGGTTCTAGA+TGG | - | chr8.3:72309672-72309691 | MS.gene07819:CDS | 35.0% |
!! | TAGGTGTACATCATTGACTT+TGG | - | chr8.3:72307939-72307958 | MS.gene07819:intron | 35.0% |
!!! | AAAATTGGTAGCGGATCTTT+TGG | - | chr8.3:72306509-72306528 | MS.gene07819:CDS | 35.0% |
AAACCCATGAGGAAATTGTC+TGG | + | chr8.3:72307805-72307824 | None:intergenic | 40.0% | |
AAAGCCAGACAATTTCCTCA+TGG | - | chr8.3:72307798-72307817 | MS.gene07819:intron | 40.0% | |
AACCGGATCTAAAGATGCTA+TGG | - | chr8.3:72310290-72310309 | MS.gene07819:CDS | 40.0% | |
AAGATGGTAGGAATATTGGG+TGG | - | chr8.3:72310175-72310194 | MS.gene07819:intron | 40.0% | |
AAGCCAGACAATTTCCTCAT+GGG | - | chr8.3:72307799-72307818 | MS.gene07819:intron | 40.0% | |
ACCATCACTTACAATACCAC+GGG | + | chr8.3:72309818-72309837 | None:intergenic | 40.0% | |
ACTGGTGTAACAATCATGCA+AGG | + | chr8.3:72308370-72308389 | None:intergenic | 40.0% | |
AGAGTACAACATCCTTGTGA+TGG | - | chr8.3:72307555-72307574 | MS.gene07819:intron | 40.0% | |
AGTGACAATGTGACACTTAC+AGG | - | chr8.3:72309899-72309918 | MS.gene07819:intron | 40.0% | |
ATACCGAATGTGAAATGGTC+CGG | - | chr8.3:72307523-72307542 | MS.gene07819:intron | 40.0% | |
ATCATTAGCAATAGGTCCAG+AGG | + | chr8.3:72310229-72310248 | None:intergenic | 40.0% | |
CACATCAGCATATTCCCTAT+AGG | - | chr8.3:72307988-72308007 | MS.gene07819:intron | 40.0% | |
CACCATAGCATCTTTAGATC+CGG | + | chr8.3:72310295-72310314 | None:intergenic | 40.0% | |
CACCATCACTTACAATACCA+CGG | + | chr8.3:72309819-72309838 | None:intergenic | 40.0% | |
CCGGTTAAGTCATTTGTAAG+TGG | + | chr8.3:72310276-72310295 | None:intergenic | 40.0% | |
CGGAACTTATTTCCAATTCG+AGG | + | chr8.3:72306479-72306498 | None:intergenic | 40.0% | |
CGTACTGTGCAAGTGAATAT+TGG | - | chr8.3:72310710-72310729 | MS.gene07819:intron | 40.0% | |
CTATTCATCCGTGAAGGTTT+GGG | - | chr8.3:72309544-72309563 | MS.gene07819:intron | 40.0% | |
CTGGAATACCGAATGTGAAA+TGG | - | chr8.3:72307518-72307537 | MS.gene07819:intron | 40.0% | |
CTTGCAGAAGTCAAAGATGA+TGG | - | chr8.3:72310362-72310381 | MS.gene07819:intron | 40.0% | |
CTTGGGAGAAAAATTGGTAG+CGG | - | chr8.3:72306500-72306519 | MS.gene07819:CDS | 40.0% | |
CTTTAATAGAGCAAAGCCGT+AGG | - | chr8.3:72309097-72309116 | MS.gene07819:intron | 40.0% | |
GACAATTTCCTCATGGGTTT+AGG | - | chr8.3:72307805-72307824 | MS.gene07819:intron | 40.0% | |
GACTGTTTACCCTTTATCCA+AGG | - | chr8.3:72310514-72310533 | MS.gene07819:intron | 40.0% | |
GGATGAGTCAGATGACAAAA+AGG | + | chr8.3:72310091-72310110 | None:intergenic | 40.0% | |
GTCCCGATGTAAAAATGACT+TGG | + | chr8.3:72307776-72307795 | None:intergenic | 40.0% | |
GTGACAATGTGACACTTACA+GGG | - | chr8.3:72309900-72309919 | MS.gene07819:intron | 40.0% | |
TATGTTGCTGTAAGTGGTCA+AGG | - | chr8.3:72308880-72308899 | MS.gene07819:intron | 40.0% | |
TCGAATTTCTTTCGGTCAAG+TGG | - | chr8.3:72310895-72310914 | MS.gene07819:intron | 40.0% | |
TCTGGACCTATTGCTAATGA+TGG | - | chr8.3:72310228-72310247 | MS.gene07819:intron | 40.0% | |
TCTTATGCTTGCCGATCAAA+TGG | - | chr8.3:72307645-72307664 | MS.gene07819:intron | 40.0% | |
TTCCGTCTTGGGAGAAAAAT+TGG | - | chr8.3:72306494-72306513 | MS.gene07819:CDS | 40.0% | |
! | ACTAATTTTGAGCTTTGCGC+GGG | - | chr8.3:72308272-72308291 | MS.gene07819:intron | 40.0% |
! | CCCATCTAGAACCTAAACTA+TGG | + | chr8.3:72309626-72309645 | None:intergenic | 40.0% |
! | GATGATTGATCAGGTTAGTC+AGG | - | chr8.3:72306975-72306994 | MS.gene07819:intron | 40.0% |
!! | ATACAACAATTGAGGGTGCT+TGG | + | chr8.3:72307353-72307372 | None:intergenic | 40.0% |
!! | GAAGTATCGATTACAGACGT+AGG | - | chr8.3:72306946-72306965 | MS.gene07819:intron | 40.0% |
!! | GGTTTCTTTTCTTTGGAAGC+TGG | - | chr8.3:72307499-72307518 | MS.gene07819:intron | 40.0% |
AAACAAGGCCCAAACCTTCA+CGG | + | chr8.3:72309555-72309574 | None:intergenic | 45.0% | |
AATGCCAGGAATGCAAAACC+AGG | + | chr8.3:72308305-72308324 | None:intergenic | 45.0% | |
ACACCGGACCATTTCACATT+CGG | + | chr8.3:72307529-72307548 | None:intergenic | 45.0% | |
ACCTCAGTGACCGACAATAA+TGG | + | chr8.3:72309477-72309496 | None:intergenic | 45.0% | |
AGGGAAACCCACCATTTGAT+CGG | + | chr8.3:72307659-72307678 | None:intergenic | 45.0% | |
ATATTACACACCCCAGAGAG+AGG | + | chr8.3:72308806-72308825 | None:intergenic | 45.0% | |
ATCTTACATTCCCCTTCTCC+GGG | - | chr8.3:72310638-72310657 | MS.gene07819:intron | 45.0% | |
ATGCTTGCCGATCAAATGGT+GGG | - | chr8.3:72307649-72307668 | MS.gene07819:intron | 45.0% | |
ATTTCCTCATGGGTTTAGGG+AGG | - | chr8.3:72307809-72307828 | MS.gene07819:intron | 45.0% | |
CATCTTACATTCCCCTTCTC+CGG | - | chr8.3:72310637-72310656 | MS.gene07819:intron | 45.0% | |
CCAAACCTTCACGGATGAAT+AGG | + | chr8.3:72309546-72309565 | None:intergenic | 45.0% | |
CCTATTCATCCGTGAAGGTT+TGG | - | chr8.3:72309543-72309562 | MS.gene07819:intron | 45.0% | |
CTAGCTTCTGCAAATGCTGA+TGG | - | chr8.3:72309954-72309973 | MS.gene07819:intron | 45.0% | |
GCGACTCTAAATCATCCCTA+CGG | + | chr8.3:72309116-72309135 | None:intergenic | 45.0% | |
GGCCAAGTAAATCCATCACA+AGG | + | chr8.3:72307570-72307589 | None:intergenic | 45.0% | |
TATGCTTGCCGATCAAATGG+TGG | - | chr8.3:72307648-72307667 | MS.gene07819:intron | 45.0% | |
TATTACACACCCCAGAGAGA+GGG | + | chr8.3:72308805-72308824 | None:intergenic | 45.0% | |
TCACTTACAATACCACGGGA+AGG | + | chr8.3:72309814-72309833 | None:intergenic | 45.0% | |
TCAGCATTTGCAGAAGCTAG+CGG | + | chr8.3:72309954-72309973 | None:intergenic | 45.0% | |
TCCATTATTGTCGGTCACTG+AGG | - | chr8.3:72309473-72309492 | MS.gene07819:intron | 45.0% | |
TCCCGTGGTATTGTAAGTGA+TGG | - | chr8.3:72309814-72309833 | MS.gene07819:CDS | 45.0% | |
TGCTGTCTCATTACGTTAGC+TGG | - | chr8.3:72309839-72309858 | MS.gene07819:CDS | 45.0% | |
TTAATGTGGTGCCTCTGTGT+AGG | - | chr8.3:72310144-72310163 | MS.gene07819:intron | 45.0% | |
! | AGGGATGATTTAGAGTCGCT+TGG | - | chr8.3:72309117-72309136 | MS.gene07819:intron | 45.0% |
! | CTAATTTTGAGCTTTGCGCG+GGG | - | chr8.3:72308273-72308292 | MS.gene07819:intron | 45.0% |
! | GGTATTTCTGCAGTCTACCT+TGG | - | chr8.3:72309238-72309257 | MS.gene07819:intron | 45.0% |
! | GGTGATGTTGATTACCGGTT+TGG | - | chr8.3:72307072-72307091 | MS.gene07819:intron | 45.0% |
! | TCTGAGCACCAGAGCTTTTA+CGG | + | chr8.3:72311026-72311045 | None:intergenic | 45.0% |
!! | TAGGTGGTGGAAAAGATGGT+AGG | - | chr8.3:72310163-72310182 | MS.gene07819:intron | 45.0% |
!! | TGTGTAGGTGGTGGAAAAGA+TGG | - | chr8.3:72310159-72310178 | MS.gene07819:intron | 45.0% |
!! | TTTACTTGGCCCTAGTCTTG+AGG | - | chr8.3:72307579-72307598 | MS.gene07819:intron | 45.0% |
!!! | CTTTCCTGGTTTTGCATTCC+TGG | - | chr8.3:72308298-72308317 | MS.gene07819:intron | 45.0% |
AACTCAGTAGTATGGGTCCG+TGG | + | chr8.3:72310672-72310691 | None:intergenic | 50.0% | |
ACTGGAATCCTGGAGCAACA+AGG | + | chr8.3:72309732-72309751 | None:intergenic | 50.0% | |
AGACTTGAATCCACCGTGAG+AGG | + | chr8.3:72310994-72311013 | None:intergenic | 50.0% | |
CGTGACCTATTCATCCGTGA+AGG | - | chr8.3:72309538-72309557 | MS.gene07819:intron | 50.0% | |
CTTACAATACCACGGGAAGG+AGG | + | chr8.3:72309811-72309830 | None:intergenic | 50.0% | |
GAATGTGAAATGGTCCGGTG+TGG | - | chr8.3:72307528-72307547 | MS.gene07819:intron | 50.0% | |
GAGCACAACCGAGTATCATC+TGG | - | chr8.3:72311069-72311088 | MS.gene07819:intron | 50.0% | |
GTTGTACTCTCCTTCCACAC+CGG | + | chr8.3:72307545-72307564 | None:intergenic | 50.0% | |
TTCGGTCAAGTGGATCTGCA+AGG | - | chr8.3:72310905-72310924 | MS.gene07819:intron | 50.0% | |
TTCTGCAGTCTACCTTGGCA+GGG | - | chr8.3:72309243-72309262 | MS.gene07819:intron | 50.0% | |
TTTCTGCAGTCTACCTTGGC+AGG | - | chr8.3:72309242-72309261 | MS.gene07819:intron | 50.0% | |
! | CTCACGGTGGATTCAAGTCT+AGG | - | chr8.3:72310994-72311013 | MS.gene07819:CDS | 50.0% |
! | CTTTGCTAGTCTCTCTGTCG+TGG | - | chr8.3:72309424-72309443 | MS.gene07819:intron | 50.0% |
! | CTTTTCCACCACCTACACAG+AGG | + | chr8.3:72310158-72310177 | None:intergenic | 50.0% |
! | GCAAATGCTGATGGACAGTC+AGG | - | chr8.3:72309963-72309982 | MS.gene07819:intron | 50.0% |
! | TGTTCTTGCCTTGTTGCTCC+AGG | - | chr8.3:72309721-72309740 | MS.gene07819:intron | 50.0% |
AATACCACGGGAAGGAGGAG+TGG | + | chr8.3:72309806-72309825 | None:intergenic | 55.0% | |
ATGTGGTGCCTCTGTGTAGG+TGG | - | chr8.3:72310147-72310166 | MS.gene07819:intron | 55.0% | |
CACTTACAGGGTCTTGCTGC+TGG | - | chr8.3:72309912-72309931 | MS.gene07819:intron | 55.0% | |
CCAGAGGTTCTCCTTCGAGT+GGG | + | chr8.3:72310213-72310232 | None:intergenic | 55.0% | |
CCTGCTTTCAATCCCTGCCA+AGG | + | chr8.3:72309258-72309277 | None:intergenic | 55.0% | |
CCTTGGCAGGGATTGAAAGC+AGG | - | chr8.3:72309255-72309274 | MS.gene07819:intron | 55.0% | |
CTTCGTCTGATCCCACTCGA+AGG | - | chr8.3:72310199-72310218 | MS.gene07819:intron | 55.0% | |
GGAGCAGTCCGTAAAAGCTC+TGG | - | chr8.3:72311015-72311034 | MS.gene07819:intron | 55.0% | |
GTGAAATGGTCCGGTGTGGA+AGG | - | chr8.3:72307532-72307551 | MS.gene07819:intron | 55.0% | |
TCAAGTGGATCTGCAAGGCG+AGG | - | chr8.3:72310910-72310929 | MS.gene07819:intron | 55.0% | |
TCCAGAGGTTCTCCTTCGAG+TGG | + | chr8.3:72310214-72310233 | None:intergenic | 55.0% | |
TGCAGCTGTTGGCAGTGAGA+CGG | - | chr8.3:72310954-72310973 | MS.gene07819:intron | 55.0% | |
TGGAAGTGAAGCCCGGAGAA+GGG | + | chr8.3:72310652-72310671 | None:intergenic | 55.0% | |
TTCTCCGGGCTTCACTTCCA+CGG | - | chr8.3:72310652-72310671 | MS.gene07819:intron | 55.0% | |
ACCGTGAGAGGACGAGAGGA+GGG | + | chr8.3:72310982-72311001 | None:intergenic | 60.0% | |
ATCCACCGTGAGAGGACGAG+AGG | + | chr8.3:72310986-72311005 | None:intergenic | 60.0% | |
CACGCCTCCCTAAACCCATG+AGG | + | chr8.3:72307816-72307835 | None:intergenic | 60.0% | |
CACTGCCAACAGCTGCATCG+CGG | + | chr8.3:72310951-72310970 | None:intergenic | 60.0% | |
CCAGAGAGAGGGAGAGAGTC+GGG | + | chr8.3:72308794-72308813 | None:intergenic | 60.0% | |
CCCACTCGAAGGAGAACCTC+TGG | - | chr8.3:72310210-72310229 | MS.gene07819:intron | 60.0% | |
CCCAGAGAGAGGGAGAGAGT+CGG | + | chr8.3:72308795-72308814 | None:intergenic | 60.0% | |
CCGACTCTCTCCCTCTCTCT+GGG | - | chr8.3:72308792-72308811 | MS.gene07819:intron | 60.0% | |
CGACTCTCTCCCTCTCTCTG+GGG | - | chr8.3:72308793-72308812 | MS.gene07819:intron | 60.0% | |
CTTGCTGCTGGACCGAGTTC+TGG | - | chr8.3:72309924-72309943 | MS.gene07819:intron | 60.0% | |
CTTTGCGCGGGGAACTTTCC+TGG | - | chr8.3:72308284-72308303 | MS.gene07819:intron | 60.0% | |
GCTAGCGGCAGACCAGAACT+CGG | + | chr8.3:72309939-72309958 | None:intergenic | 60.0% | |
GGAAGTGAAGCCCGGAGAAG+GGG | + | chr8.3:72310651-72310670 | None:intergenic | 60.0% | |
GTGGAAGTGAAGCCCGGAGA+AGG | + | chr8.3:72310653-72310672 | None:intergenic | 60.0% | |
TGGTGCCTCTGTGTAGGTGG+TGG | - | chr8.3:72310150-72310169 | MS.gene07819:intron | 60.0% | |
AGCAGCCGCGATGCAGCTGT+TGG | - | chr8.3:72310943-72310962 | MS.gene07819:intron | 65.0% | |
ATCGCCACTCCTCCTTCCCG+TGG | - | chr8.3:72309799-72309818 | MS.gene07819:intron | 65.0% | |
CACCGTGAGAGGACGAGAGG+AGG | + | chr8.3:72310983-72311002 | None:intergenic | 65.0% | |
CCCGACTCTCTCCCTCTCTC+TGG | - | chr8.3:72308791-72308810 | MS.gene07819:intron | 65.0% | |
CTCCTCTCGTCCTCTCACGG+TGG | - | chr8.3:72310981-72311000 | MS.gene07819:CDS | 65.0% | |
GCCCTCCTCTCGTCCTCTCA+CGG | - | chr8.3:72310978-72310997 | MS.gene07819:CDS | 65.0% | |
GGGTCCGTGGAAGTGAAGCC+CGG | + | chr8.3:72310659-72310678 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 72306470 | 72311179 | 72306470 | ID=MS.gene07819 |
chr8.3 | mRNA | 72306470 | 72311179 | 72306470 | ID=MS.gene07819.t1;Parent=MS.gene07819 |
chr8.3 | exon | 72311104 | 72311179 | 72311104 | ID=MS.gene07819.t1.exon1;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72311104 | 72311179 | 72311104 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72310977 | 72311017 | 72310977 | ID=MS.gene07819.t1.exon2;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72310977 | 72311017 | 72310977 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72310243 | 72310312 | 72310243 | ID=MS.gene07819.t1.exon3;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72310243 | 72310312 | 72310243 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72309983 | 72310131 | 72309983 | ID=MS.gene07819.t1.exon4;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72309983 | 72310131 | 72309983 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72309806 | 72309901 | 72309806 | ID=MS.gene07819.t1.exon5;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72309806 | 72309901 | 72309806 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72309640 | 72309707 | 72309640 | ID=MS.gene07819.t1.exon6;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72309640 | 72309707 | 72309640 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72308631 | 72308692 | 72308631 | ID=MS.gene07819.t1.exon7;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72308631 | 72308692 | 72308631 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72308480 | 72308543 | 72308480 | ID=MS.gene07819.t1.exon8;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72308480 | 72308543 | 72308480 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72308314 | 72308398 | 72308314 | ID=MS.gene07819.t1.exon9;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72308314 | 72308398 | 72308314 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72308090 | 72308216 | 72308090 | ID=MS.gene07819.t1.exon10;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72308090 | 72308216 | 72308090 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72307824 | 72307906 | 72307824 | ID=MS.gene07819.t1.exon11;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72307824 | 72307906 | 72307824 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72307665 | 72307728 | 72307665 | ID=MS.gene07819.t1.exon12;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72307665 | 72307728 | 72307665 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72307338 | 72307483 | 72307338 | ID=MS.gene07819.t1.exon13;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72307338 | 72307483 | 72307338 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
chr8.3 | exon | 72306470 | 72306763 | 72306470 | ID=MS.gene07819.t1.exon14;Parent=MS.gene07819.t1 |
chr8.3 | CDS | 72306470 | 72306763 | 72306470 | ID=cds.MS.gene07819.t1;Parent=MS.gene07819.t1 |
Gene Sequence |
Protein sequence |