Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08114.t1 | XP_013460119.1 | 96.5 | 423 | 15 | 0 | 1 | 423 | 1 | 423 | 2.80E-226 | 794.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08114.t1 | Q8VXY7 | 63.1 | 420 | 148 | 3 | 7 | 423 | 35 | 450 | 3.2e-146 | 519.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08114.t1 | A0A072V7J4 | 96.5 | 423 | 15 | 0 | 1 | 423 | 1 | 423 | 2.0e-226 | 794.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08114 | MS.gene59641 | PPI |
| MS.gene08114 | MS.gene036759 | PPI |
| MS.gene08114 | MS.gene62397 | PPI |
| MS.gene08114 | MS.gene036758 | PPI |
| MS.gene08114 | MS.gene59944 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08114.t1 | MTR_3g462280 | 96.454 | 423 | 15 | 0 | 1 | 423 | 1 | 423 | 0.0 | 827 |
| MS.gene08114.t1 | MTR_0003s0470 | 84.010 | 394 | 63 | 0 | 30 | 423 | 22 | 415 | 0.0 | 683 |
| MS.gene08114.t1 | MTR_4g114710 | 47.174 | 407 | 196 | 6 | 21 | 423 | 7 | 398 | 1.11e-118 | 352 |
| MS.gene08114.t1 | MTR_0008s0170 | 32.000 | 400 | 247 | 7 | 42 | 423 | 18 | 410 | 2.91e-56 | 191 |
| MS.gene08114.t1 | MTR_0008s0130 | 30.750 | 400 | 252 | 7 | 42 | 423 | 18 | 410 | 3.86e-53 | 183 |
| MS.gene08114.t1 | MTR_2g011600 | 30.374 | 428 | 259 | 10 | 21 | 423 | 6 | 419 | 1.69e-51 | 179 |
| MS.gene08114.t1 | MTR_2g011580 | 31.429 | 385 | 236 | 8 | 59 | 423 | 2 | 378 | 1.60e-49 | 172 |
| MS.gene08114.t1 | MTR_4g050990 | 32.010 | 403 | 243 | 9 | 42 | 423 | 18 | 410 | 2.59e-48 | 170 |
| MS.gene08114.t1 | MTR_2g089520 | 32.010 | 403 | 243 | 9 | 42 | 423 | 18 | 410 | 2.59e-48 | 170 |
| MS.gene08114.t1 | MTR_2g047968 | 31.785 | 409 | 251 | 9 | 34 | 423 | 11 | 410 | 7.58e-47 | 167 |
| MS.gene08114.t1 | MTR_2g011600 | 31.476 | 359 | 207 | 9 | 92 | 423 | 22 | 368 | 4.29e-43 | 155 |
| MS.gene08114.t1 | MTR_1g071120 | 29.231 | 325 | 204 | 7 | 42 | 349 | 60 | 375 | 1.10e-37 | 142 |
| MS.gene08114.t1 | MTR_8g007285 | 30.484 | 351 | 209 | 8 | 100 | 423 | 20 | 362 | 6.63e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08114.t1 | AT1G70330 | 63.095 | 420 | 148 | 3 | 7 | 423 | 35 | 450 | 0.0 | 526 |
| MS.gene08114.t1 | AT1G02630 | 47.315 | 391 | 190 | 6 | 34 | 423 | 14 | 389 | 4.14e-121 | 357 |
| MS.gene08114.t1 | AT1G02630 | 40.409 | 391 | 173 | 7 | 34 | 423 | 14 | 345 | 6.50e-91 | 279 |
| MS.gene08114.t1 | AT4G05120 | 32.911 | 395 | 239 | 9 | 47 | 423 | 26 | 412 | 9.63e-53 | 182 |
| MS.gene08114.t1 | AT4G05120 | 32.911 | 395 | 239 | 9 | 47 | 423 | 26 | 412 | 9.63e-53 | 182 |
| MS.gene08114.t1 | AT4G05110 | 30.193 | 414 | 263 | 8 | 29 | 423 | 6 | 412 | 5.08e-48 | 169 |
| MS.gene08114.t1 | AT4G05110 | 30.193 | 414 | 263 | 8 | 29 | 423 | 6 | 412 | 5.08e-48 | 169 |
| MS.gene08114.t1 | AT4G05130 | 29.147 | 422 | 265 | 12 | 25 | 423 | 2 | 412 | 1.01e-47 | 169 |
| MS.gene08114.t1 | AT4G05110 | 30.361 | 415 | 261 | 9 | 29 | 423 | 6 | 412 | 1.22e-47 | 169 |
| MS.gene08114.t1 | AT1G61630 | 29.524 | 420 | 256 | 9 | 33 | 423 | 4 | 412 | 1.14e-44 | 160 |
| MS.gene08114.t1 | AT4G05140 | 28.861 | 395 | 256 | 8 | 47 | 423 | 26 | 413 | 1.22e-43 | 158 |
| MS.gene08114.t1 | AT3G09990 | 28.571 | 406 | 262 | 7 | 38 | 423 | 16 | 413 | 4.59e-43 | 156 |
Find 102 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCGGCGGTTGTGGTTTC+TGG | 0.124080 | 3.3:+49958354 | MS.gene08114:CDS |
| GGTCTATCATCTCTTGGTTT+TGG | 0.180124 | 3.3:+49961893 | MS.gene08114:CDS |
| TTGGTGCAGGGATCTATTCT+TGG | 0.243274 | 3.3:+49958390 | MS.gene08114:CDS |
| GGTCGGGTTGGGTTGTATAA+TGG | 0.293999 | 3.3:+49958318 | MS.gene08114:CDS |
| TGGGTCTGCCGGTGAGTTGC+CGG | 0.304114 | 3.3:+49958410 | MS.gene08114:CDS |
| CATGAGATTTGTGGCGGTTA+AGG | 0.318832 | 3.3:-49958212 | None:intergenic |
| GTGGTTTCTGGTGTGGCTAA+TGG | 0.329953 | 3.3:+49958366 | MS.gene08114:CDS |
| ACCTTCAGATTCAGAAGCTT+CGG | 0.344309 | 3.3:+49957987 | MS.gene08114:CDS |
| CCTTCAGATTCAGAAGCTTC+GGG | 0.345459 | 3.3:+49957988 | MS.gene08114:CDS |
| CTTGATGTGGTTTATGTTAA+GGG | 0.346931 | 3.3:+49958297 | MS.gene08114:CDS |
| TCCTCGCTATCTAGTCTTGT+TGG | 0.354362 | 3.3:+49958174 | MS.gene08114:CDS |
| ACCAAGTTCCATGTGTCTTC+TGG | 0.357197 | 3.3:-49958027 | None:intergenic |
| GCTTGATGTGGTTTATGTTA+AGG | 0.366241 | 3.3:+49958296 | MS.gene08114:CDS |
| TGGTGCAGGGATCTATTCTT+GGG | 0.370255 | 3.3:+49958391 | MS.gene08114:CDS |
| TTCATCATAGTACTTCATAA+TGG | 0.373359 | 3.3:-49961347 | None:intergenic |
| CTGCTGGGTCTATCATCTCT+TGG | 0.374336 | 3.3:+49961887 | MS.gene08114:CDS |
| TTCTGGTGTGGCTAATGGTT+TGG | 0.383329 | 3.3:+49958371 | MS.gene08114:CDS |
| TATAATGTGTTTGATCTTGT+TGG | 0.385055 | 3.3:+49961589 | MS.gene08114:CDS |
| GTGACACTTGCAATATTTCC+TGG | 0.386495 | 3.3:+49961499 | MS.gene08114:CDS |
| AGTGTGTTGTTCTTAGCTTT+TGG | 0.387748 | 3.3:+49961859 | MS.gene08114:CDS |
| CTATGATGAACTAAAGATTC+AGG | 0.389291 | 3.3:+49961360 | MS.gene08114:CDS |
| TAGCTAGTAACAAGGAGAAT+TGG | 0.391073 | 3.3:-49961568 | None:intergenic |
| GTTTATGTTAAGGGTCGGGT+TGG | 0.405705 | 3.3:+49958306 | MS.gene08114:CDS |
| TGTCCACTCCCAACATCTTA+AGG | 0.407221 | 3.3:+49961537 | MS.gene08114:CDS |
| CTAGTAGGTATACCGCGGTC+AGG | 0.423174 | 3.3:-49961618 | None:intergenic |
| TCATCATAGTACTTCATAAT+GGG | 0.436522 | 3.3:-49961346 | None:intergenic |
| TGTGGCTAATGGTTTGGTGC+AGG | 0.437303 | 3.3:+49958377 | MS.gene08114:CDS |
| TTTATGTTAAGGGTCGGGTT+GGG | 0.437780 | 3.3:+49958307 | MS.gene08114:CDS |
| ACAATCAAGTGGTATGGGTT+TGG | 0.448192 | 3.3:+49961457 | MS.gene08114:CDS |
| GGATCTATTCTTGGGTCTGC+CGG | 0.448560 | 3.3:+49958399 | MS.gene08114:CDS |
| AACGACAATGGTCCTTTGAC+TGG | 0.453146 | 3.3:+49961397 | MS.gene08114:CDS |
| GATACCAATCCTTAAGATGT+TGG | 0.454637 | 3.3:-49961546 | None:intergenic |
| TGTTACTGTTGCGGCGGTTG+TGG | 0.456462 | 3.3:+49958347 | MS.gene08114:CDS |
| ATTGTTTGTTGTTTCGCTCT+TGG | 0.460422 | 3.3:+49958263 | MS.gene08114:CDS |
| ATGTGGTTTATGTTAAGGGT+CGG | 0.468083 | 3.3:+49958301 | MS.gene08114:CDS |
| ATGGGAACAATCAAGTGGTA+TGG | 0.468287 | 3.3:+49961451 | MS.gene08114:CDS |
| ATACCAATCCTTAAGATGTT+GGG | 0.474096 | 3.3:-49961545 | None:intergenic |
| TACACGCAGGCTGTCATTGT+TGG | 0.479457 | 3.3:+49958438 | MS.gene08114:CDS |
| GTCCTTTGACTGGATCTGTC+TGG | 0.479524 | 3.3:+49961407 | MS.gene08114:CDS |
| ACACGCAGGCTGTCATTGTT+GGG | 0.488538 | 3.3:+49958439 | MS.gene08114:CDS |
| CTGTCTGGAGATCAACTGTA+TGG | 0.490108 | 3.3:+49961422 | MS.gene08114:CDS |
| CTGCAGCATGCAGAGACTGC+AGG | 0.490725 | 3.3:+49961829 | MS.gene08114:CDS |
| ACCAGAAGACACATGGAACT+TGG | 0.495583 | 3.3:+49958026 | MS.gene08114:CDS |
| ATCTATTTCACACTTGGCAT+CGG | 0.499105 | 3.3:+49958057 | MS.gene08114:CDS |
| GTGGCTAATGGTTTGGTGCA+GGG | 0.499990 | 3.3:+49958378 | MS.gene08114:CDS |
| GCATCGGTTACTTGTTCCCA+TGG | 0.504050 | 3.3:+49958073 | MS.gene08114:CDS |
| ATTGTTGGGAGTGCTGCCTC+TGG | 0.508199 | 3.3:+49958453 | MS.gene08114:CDS |
| TCACATAAGCATGAGATTTG+TGG | 0.511557 | 3.3:-49958221 | None:intergenic |
| TGTGGTTTATGTTAAGGGTC+GGG | 0.513219 | 3.3:+49958302 | MS.gene08114:CDS |
| TGCAAGCATCCTAAGAAGAG+AGG | 0.520652 | 3.3:-49961691 | None:intergenic |
| CTCTTCTTAGGATGCTTGCA+CGG | 0.521892 | 3.3:+49961694 | MS.gene08114:CDS |
| GCAGTGACGAATGCGTTCCA+TGG | 0.523544 | 3.3:-49958090 | None:intergenic |
| GGGTTCTTGTTTCTTTCCTG+AGG | 0.526966 | 3.3:+49961197 | MS.gene08114:CDS |
| ACTCCCAACATCTTAAGGAT+TGG | 0.530973 | 3.3:+49961542 | MS.gene08114:CDS |
| ATACCACTTGATTGTTCCCA+TGG | 0.538448 | 3.3:-49961449 | None:intergenic |
| TGTGATTATGTTCATATGCA+TGG | 0.539930 | 3.3:+49961297 | MS.gene08114:CDS |
| TATATAATCTATTTCACACT+TGG | 0.540386 | 3.3:+49958051 | MS.gene08114:CDS |
| CAGCCTTTGTAAATATCCTC+AGG | 0.542697 | 3.3:-49961213 | None:intergenic |
| ATCTGAAGGTAATAGAAGAA+TGG | 0.549106 | 3.3:-49957974 | None:intergenic |
| GGTAGTTCCATTGCTTGATG+TGG | 0.559751 | 3.3:+49958284 | MS.gene08114:CDS |
| TGGGAACAATCAAGTGGTAT+GGG | 0.560400 | 3.3:+49961452 | MS.gene08114:CDS |
| TGCAGCATGCAGAGACTGCA+GGG | 0.560587 | 3.3:+49961830 | MS.gene08114:CDS |
| GGCGGTTGTGGTTTCTGGTG+TGG | 0.565202 | 3.3:+49958359 | MS.gene08114:CDS |
| TGAAGGTAATAGAAGAATGG+TGG | 0.566147 | 3.3:-49957971 | None:intergenic |
| TTTCCTGAGGATATTTACAA+AGG | 0.567032 | 3.3:+49961210 | MS.gene08114:CDS |
| CAGTGACGAATGCGTTCCAT+GGG | 0.567150 | 3.3:-49958089 | None:intergenic |
| TTGTGACAGGAATCTCTGTC+CGG | 0.573239 | 3.3:-49961729 | None:intergenic |
| ACAGCCTGCGTGTACCTCTC+CGG | 0.575693 | 3.3:-49958429 | None:intergenic |
| TGGATTCTATGTTACTGTTG+CGG | 0.577268 | 3.3:+49958338 | MS.gene08114:CDS |
| ACACAAGTCAGTATTGTGAC+AGG | 0.577437 | 3.3:-49961742 | None:intergenic |
| AATCCTTAAGATGTTGGGAG+TGG | 0.578262 | 3.3:-49961540 | None:intergenic |
| TAGTAGGTATACCGCGGTCA+GGG | 0.578486 | 3.3:-49961617 | None:intergenic |
| AGCAAAGATACGGTCAACAC+TGG | 0.599035 | 3.3:-49958145 | None:intergenic |
| AGGAAACAAGAGCAAAGATA+CGG | 0.604285 | 3.3:-49958155 | None:intergenic |
| CCCGAAGCTTCTGAATCTGA+AGG | 0.606607 | 3.3:-49957988 | None:intergenic |
| ATTTCCTGGTTTCATTACCG+AGG | 0.608464 | 3.3:+49961513 | MS.gene08114:CDS |
| GTACCTCTCCGGCAACTCAC+CGG | 0.609722 | 3.3:-49958418 | None:intergenic |
| CTCCAGACAGATCCAGTCAA+AGG | 0.612500 | 3.3:-49961409 | None:intergenic |
| CTGCCGGTGAGTTGCCGGAG+AGG | 0.613909 | 3.3:+49958415 | MS.gene08114:CDS |
| ACATAAACCACATCAAGCAA+TGG | 0.615819 | 3.3:-49958291 | None:intergenic |
| GCAAGCATCCTAAGAAGAGA+GGG | 0.616215 | 3.3:-49961690 | None:intergenic |
| TACGGTCAACACTGGCATGA+GGG | 0.617040 | 3.3:-49958137 | None:intergenic |
| AAGATAAGAGAAATAGTCAA+CGG | 0.620045 | 3.3:-49958112 | None:intergenic |
| GTTTACACACAAGATGCCTC+CGG | 0.623807 | 3.3:+49961235 | MS.gene08114:CDS |
| CTTCAGATTCAGAAGCTTCG+GGG | 0.628928 | 3.3:+49957989 | MS.gene08114:CDS |
| ACATCCTCGGTAATGAAACC+AGG | 0.632229 | 3.3:-49961517 | None:intergenic |
| ATACGGTCAACACTGGCATG+AGG | 0.636058 | 3.3:-49958138 | None:intergenic |
| ATCAACTGTATGGAATACCA+TGG | 0.637444 | 3.3:+49961432 | MS.gene08114:CDS |
| AAAGATTCAGGCAGTCGCTG+TGG | 0.637983 | 3.3:+49961372 | MS.gene08114:CDS |
| ACCAACAAGACTAGATAGCG+AGG | 0.646084 | 3.3:-49958175 | None:intergenic |
| CATAAGCATGAGATTTGTGG+CGG | 0.647174 | 3.3:-49958218 | None:intergenic |
| GTCGCTGTGGAAAACGACAA+TGG | 0.654733 | 3.3:+49961385 | MS.gene08114:CDS |
| TCAACTGTATGGAATACCAT+GGG | 0.656398 | 3.3:+49961433 | MS.gene08114:CDS |
| ACAAATCTCATGCTTATGTG+AGG | 0.662169 | 3.3:+49958223 | MS.gene08114:CDS |
| ATGTTGGGAGTGGACATCCT+CGG | 0.666348 | 3.3:-49961530 | None:intergenic |
| ATACCATGGGAACAATCAAG+TGG | 0.670798 | 3.3:+49961446 | MS.gene08114:CDS |
| GCTTATGTGAGGATCAATGT+TGG | 0.673726 | 3.3:+49958234 | MS.gene08114:CDS |
| ATTCTATGTTACTGTTGCGG+CGG | 0.685493 | 3.3:+49958341 | MS.gene08114:CDS |
| ACACATTATAGCTAGTAACA+AGG | 0.697941 | 3.3:-49961576 | None:intergenic |
| GTTGCCGGAGAGGTACACGC+AGG | 0.715210 | 3.3:+49958425 | MS.gene08114:CDS |
| TGTTGGTAAATCCCTGACCG+CGG | 0.729349 | 3.3:+49961606 | MS.gene08114:CDS |
| ATTCTCTAGTAGGTATACCG+CGG | 0.757076 | 3.3:-49961623 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGCTAAATAATTTTTTT+TGG | - | chr3.3:49959053-49959072 | None:intergenic | 10.0% |
| !! | AGAATGTTAATAATTCATTA+TGG | + | chr3.3:49959170-49959189 | MS.gene08114:intron | 15.0% |
| !! | GAATGTTAATAATTCATTAT+GGG | + | chr3.3:49959171-49959190 | MS.gene08114:intron | 15.0% |
| !!! | ATTTACATTTTGTTGAAATT+AGG | - | chr3.3:49959954-49959973 | None:intergenic | 15.0% |
| !!! | CTATTTTTTGAAGTTATTAT+CGG | + | chr3.3:49958626-49958645 | MS.gene08114:intron | 15.0% |
| !!! | TATTTATGTTTTTGATTTCA+GGG | + | chr3.3:49961176-49961195 | MS.gene08114:intron | 15.0% |
| !!! | TTATTTATGTTTTTGATTTC+AGG | + | chr3.3:49961175-49961194 | MS.gene08114:intron | 15.0% |
| !! | AAAAAAAAAAACGATGCATT+CGG | + | chr3.3:49958584-49958603 | MS.gene08114:intron | 20.0% |
| !! | AAAAAAAAATGACATCAGAA+TGG | - | chr3.3:49960328-49960347 | None:intergenic | 20.0% |
| !! | AAAACATAAATAATGTGAAG+AGG | - | chr3.3:49961168-49961187 | None:intergenic | 20.0% |
| !! | ACCTTTCTTAAAAATGTATT+GGG | + | chr3.3:49959640-49959659 | MS.gene08114:intron | 20.0% |
| !! | ATTGTATTAGTAAATACCTT+AGG | - | chr3.3:49960571-49960590 | None:intergenic | 20.0% |
| !! | TACCTTTCTTAAAAATGTAT+TGG | + | chr3.3:49959639-49959658 | MS.gene08114:intron | 20.0% |
| !! | TATATAATCTATTTCACACT+TGG | + | chr3.3:49958051-49958070 | MS.gene08114:CDS | 20.0% |
| !! | TGTTAGATTCAATTTCAAAA+TGG | + | chr3.3:49959760-49959779 | MS.gene08114:intron | 20.0% |
| !! | TTATAATTGACATTACATGA+GGG | + | chr3.3:49960892-49960911 | MS.gene08114:intron | 20.0% |
| !! | TTTATAATTGACATTACATG+AGG | + | chr3.3:49960891-49960910 | MS.gene08114:intron | 20.0% |
| !! | TTTGCAAAAAAAAAACATAC+TGG | - | chr3.3:49959415-49959434 | None:intergenic | 20.0% |
| !!! | ATTTATGTTTTTGATTTCAG+GGG | + | chr3.3:49961177-49961196 | MS.gene08114:intron | 20.0% |
| !!! | TTTTTTTGCAAATTTTTTGC+CGG | + | chr3.3:49959423-49959442 | MS.gene08114:intron | 20.0% |
| ! | AAATAATCAAGGACATGAAA+TGG | + | chr3.3:49960219-49960238 | MS.gene08114:intron | 25.0% |
| ! | AAGATAAGAGAAATAGTCAA+CGG | - | chr3.3:49958115-49958134 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGATCATATCA+AGG | - | chr3.3:49960727-49960746 | None:intergenic | 25.0% |
| ! | ATCATATATGATGTGAGAAT+GGG | + | chr3.3:49958709-49958728 | MS.gene08114:intron | 25.0% |
| ! | GTCTTCATAAAATAAAACCT+GGG | + | chr3.3:49959385-49959404 | MS.gene08114:intron | 25.0% |
| ! | TAAATCTAATGCCCAAATTT+AGG | - | chr3.3:49961030-49961049 | None:intergenic | 25.0% |
| ! | TAACGATGAAAGAAATGTTT+AGG | - | chr3.3:49960180-49960199 | None:intergenic | 25.0% |
| ! | TATAATGTGTTTGATCTTGT+TGG | + | chr3.3:49961589-49961608 | MS.gene08114:CDS | 25.0% |
| ! | TATATGTTCAATTGTATGCT+AGG | - | chr3.3:49960825-49960844 | None:intergenic | 25.0% |
| ! | TCATCATAGTACTTCATAAT+GGG | - | chr3.3:49961349-49961368 | None:intergenic | 25.0% |
| ! | TTCATCATAGTACTTCATAA+TGG | - | chr3.3:49961350-49961369 | None:intergenic | 25.0% |
| ! | TTCTTATTGTAATGAGCATT+CGG | + | chr3.3:49958752-49958771 | MS.gene08114:intron | 25.0% |
| ! | TTGAACTTAAGAAAAGTAAG+TGG | + | chr3.3:49961138-49961157 | MS.gene08114:intron | 25.0% |
| !! | ACTTTGTCACTATTTTCATT+TGG | + | chr3.3:49958489-49958508 | MS.gene08114:intron | 25.0% |
| !! | CTTTGTCACTATTTTCATTT+GGG | + | chr3.3:49958490-49958509 | MS.gene08114:intron | 25.0% |
| !! | GCATTAGATTTAGTATTGAA+CGG | + | chr3.3:49961038-49961057 | MS.gene08114:intron | 25.0% |
| !! | GTTAGAATTTAGAGGTTTTT+GGG | - | chr3.3:49959331-49959350 | None:intergenic | 25.0% |
| !! | TAAAAGATCTTCAAGTTCAT+AGG | - | chr3.3:49960026-49960045 | None:intergenic | 25.0% |
| !! | TAACATTCTGAGCAATATTT+TGG | - | chr3.3:49959159-49959178 | None:intergenic | 25.0% |
| !! | TGTAAGGAATTGTTTAACTT+TGG | + | chr3.3:49961070-49961089 | MS.gene08114:intron | 25.0% |
| !! | TTTGTCACTATTTTCATTTG+GGG | + | chr3.3:49958491-49958510 | MS.gene08114:intron | 25.0% |
| !!! | GGTAAAAAAATTTGTTGTCT+CGG | - | chr3.3:49960706-49960725 | None:intergenic | 25.0% |
| !!! | TCCCAATACATTTTTAAGAA+AGG | - | chr3.3:49959644-49959663 | None:intergenic | 25.0% |
| !!! | TGCATCGTTTTTTTTTTTGT+CGG | - | chr3.3:49958582-49958601 | None:intergenic | 25.0% |
| !!! | TGTAACTTTTTTGTTTTGAG+AGG | + | chr3.3:49959982-49960001 | MS.gene08114:intron | 25.0% |
| !!! | TTCAACTATTTTAGCAGTAA+TGG | + | chr3.3:49960737-49960756 | MS.gene08114:intron | 25.0% |
| AACATAGTCACATAATTCGT+CGG | - | chr3.3:49959558-49959577 | None:intergenic | 30.0% | |
| AACTACGAATTATGTGACTA+TGG | - | chr3.3:49958793-49958812 | None:intergenic | 30.0% | |
| AAGTGATGGTTAGAATTTAG+AGG | - | chr3.3:49959339-49959358 | None:intergenic | 30.0% | |
| ACACACTCTTTCTTCTTATT+TGG | - | chr3.3:49960406-49960425 | None:intergenic | 30.0% | |
| ACACATTATAGCTAGTAACA+AGG | - | chr3.3:49961579-49961598 | None:intergenic | 30.0% | |
| ACTACGAATTATGTGACTAT+GGG | - | chr3.3:49958792-49958811 | None:intergenic | 30.0% | |
| ATACCAATCCTTAAGATGTT+GGG | - | chr3.3:49961548-49961567 | None:intergenic | 30.0% | |
| ATAGTAGGTTTATAAAGAGG+AGG | + | chr3.3:49959886-49959905 | MS.gene08114:intron | 30.0% | |
| ATATTCTGATCATGTACCTA+AGG | + | chr3.3:49960552-49960571 | MS.gene08114:intron | 30.0% | |
| ATCTGAAGGTAATAGAAGAA+TGG | - | chr3.3:49957977-49957996 | None:intergenic | 30.0% | |
| CAACTGGAATTCCTAAATTT+GGG | + | chr3.3:49961016-49961035 | MS.gene08114:intron | 30.0% | |
| CACATAGTAGGTTTATAAAG+AGG | + | chr3.3:49959883-49959902 | MS.gene08114:intron | 30.0% | |
| CACATCATATATGATCTGTA+AGG | - | chr3.3:49958704-49958723 | None:intergenic | 30.0% | |
| CGTCTTCATAAAATAAAACC+TGG | + | chr3.3:49959384-49959403 | MS.gene08114:intron | 30.0% | |
| CTATGATGAACTAAAGATTC+AGG | + | chr3.3:49961360-49961379 | MS.gene08114:CDS | 30.0% | |
| CTTGATGTGGTTTATGTTAA+GGG | + | chr3.3:49958297-49958316 | MS.gene08114:CDS | 30.0% | |
| GATCATATATGATGTGAGAA+TGG | + | chr3.3:49958708-49958727 | MS.gene08114:intron | 30.0% | |
| TAGATCTAAATCTCAAGTGA+TGG | - | chr3.3:49959353-49959372 | None:intergenic | 30.0% | |
| TATCAGTGTCAATGTTGTAT+CGG | + | chr3.3:49958657-49958676 | MS.gene08114:intron | 30.0% | |
| TCAACTGGAATTCCTAAATT+TGG | + | chr3.3:49961015-49961034 | MS.gene08114:intron | 30.0% | |
| TGAACGGAAAATAATGTGTA+AGG | + | chr3.3:49961054-49961073 | MS.gene08114:intron | 30.0% | |
| TGTGATTATGTTCATATGCA+TGG | + | chr3.3:49961297-49961316 | MS.gene08114:CDS | 30.0% | |
| TGTGTGTGTATATAAATGGT+GGG | - | chr3.3:49959810-49959829 | None:intergenic | 30.0% | |
| TTATTGTGTACTTAGCAACT+TGG | + | chr3.3:49960057-49960076 | MS.gene08114:intron | 30.0% | |
| TTGGTGTGTGTGTATATAAA+TGG | - | chr3.3:49959814-49959833 | None:intergenic | 30.0% | |
| TTTCCTGAGGATATTTACAA+AGG | + | chr3.3:49961210-49961229 | MS.gene08114:CDS | 30.0% | |
| ! | CAATTTTTGCATTCTCTAGT+AGG | - | chr3.3:49961636-49961655 | None:intergenic | 30.0% |
| ! | CAGAATGGATTCTTTCTAAT+TGG | - | chr3.3:49960313-49960332 | None:intergenic | 30.0% |
| ! | GGAATTGTTTAACTTTGGAA+AGG | + | chr3.3:49961075-49961094 | MS.gene08114:intron | 30.0% |
| ! | GGTTAGAATTTAGAGGTTTT+TGG | - | chr3.3:49959332-49959351 | None:intergenic | 30.0% |
| ! | TCATTTCACTAGGTTATTTC+TGG | - | chr3.3:49960850-49960869 | None:intergenic | 30.0% |
| ! | TGTTAAGTGGATTCTTAGTT+TGG | + | chr3.3:49960278-49960297 | MS.gene08114:intron | 30.0% |
| ! | TGTTGAACATTTTTGTGATG+TGG | + | chr3.3:49960085-49960104 | MS.gene08114:intron | 30.0% |
| !! | ATGGGTTGAAGAAATTTTAC+AGG | - | chr3.3:49959296-49959315 | None:intergenic | 30.0% |
| !!! | ACAATACTGACTTGTGTTTT+AGG | + | chr3.3:49961748-49961767 | MS.gene08114:CDS | 30.0% |
| !!! | ACTATTTTAGCAGTAATGGT+AGG | + | chr3.3:49960741-49960760 | MS.gene08114:intron | 30.0% |
| !!! | CAATACTGACTTGTGTTTTA+GGG | + | chr3.3:49961749-49961768 | MS.gene08114:CDS | 30.0% |
| !!! | TGCTGGACATTTTTTACATT+GGG | - | chr3.3:49959212-49959231 | None:intergenic | 30.0% |
| !!! | TTGCTGGACATTTTTTACAT+TGG | - | chr3.3:49959213-49959232 | None:intergenic | 30.0% |
| AAAAAAAACGATGCATTCGG+AGG | + | chr3.3:49958587-49958606 | MS.gene08114:intron | 35.0% | |
| AAAAACATACTGGTAAACCC+AGG | - | chr3.3:49959405-49959424 | None:intergenic | 35.0% | |
| AAACATATCCAAGAAGAGAG+TGG | - | chr3.3:49959585-49959604 | None:intergenic | 35.0% | |
| AAACTCAAGTCACACATAGT+AGG | + | chr3.3:49959871-49959890 | MS.gene08114:intron | 35.0% | |
| ACAAATCTCATGCTTATGTG+AGG | + | chr3.3:49958223-49958242 | MS.gene08114:CDS | 35.0% | |
| ACATAAACCACATCAAGCAA+TGG | - | chr3.3:49958294-49958313 | None:intergenic | 35.0% | |
| ACATAATTCGTAGTTCGCTT+CGG | + | chr3.3:49958798-49958817 | MS.gene08114:intron | 35.0% | |
| AGGAAACAAGAGCAAAGATA+CGG | - | chr3.3:49958158-49958177 | None:intergenic | 35.0% | |
| AGTGTTAGATGAAATACCAG+AGG | - | chr3.3:49958472-49958491 | None:intergenic | 35.0% | |
| ATCAACTGTATGGAATACCA+TGG | + | chr3.3:49961432-49961451 | MS.gene08114:CDS | 35.0% | |
| ATCAGTGTCAATGTTGTATC+GGG | + | chr3.3:49958658-49958677 | MS.gene08114:intron | 35.0% | |
| ATCTATTTCACACTTGGCAT+CGG | + | chr3.3:49958057-49958076 | MS.gene08114:CDS | 35.0% | |
| ATGAAGTGATCCTTAGTAGT+TGG | + | chr3.3:49960123-49960142 | MS.gene08114:intron | 35.0% | |
| ATGTGGTTTATGTTAAGGGT+CGG | + | chr3.3:49958301-49958320 | MS.gene08114:CDS | 35.0% | |
| ATGTTTCACTCAGTAATGAG+GGG | - | chr3.3:49960435-49960454 | None:intergenic | 35.0% | |
| ATTACATGAGGGAAAAAGGT+GGG | + | chr3.3:49960903-49960922 | MS.gene08114:intron | 35.0% | |
| ATTCCAGTTGAAATTGTCAC+AGG | - | chr3.3:49961006-49961025 | None:intergenic | 35.0% | |
| CATGTTTCACTCAGTAATGA+GGG | - | chr3.3:49960436-49960455 | None:intergenic | 35.0% | |
| CGAATTATGTGACTATGTTC+CGG | + | chr3.3:49959559-49959578 | MS.gene08114:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr3.3:49959930-49959949 | None:intergenic | 35.0% | |
| GAAAAATCACCATCTCACAT+TGG | + | chr3.3:49959662-49959681 | MS.gene08114:intron | 35.0% | |
| GAGAATGCAAAAATTGTCGT+AGG | + | chr3.3:49961640-49961659 | MS.gene08114:CDS | 35.0% | |
| GATACCAATCCTTAAGATGT+TGG | - | chr3.3:49961549-49961568 | None:intergenic | 35.0% | |
| GCTATTGCTTTCATTTCACT+AGG | - | chr3.3:49960860-49960879 | None:intergenic | 35.0% | |
| GCTTGATGTGGTTTATGTTA+AGG | + | chr3.3:49958296-49958315 | MS.gene08114:CDS | 35.0% | |
| GTGTGTGTGTATATAAATGG+TGG | - | chr3.3:49959811-49959830 | None:intergenic | 35.0% | |
| TACTGATGCATTTGTATGCT+AGG | - | chr3.3:49960608-49960627 | None:intergenic | 35.0% | |
| TAGCTAGTAACAAGGAGAAT+TGG | - | chr3.3:49961571-49961590 | None:intergenic | 35.0% | |
| TAGGATAGTGTTACAGAAAC+CGG | - | chr3.3:49960806-49960825 | None:intergenic | 35.0% | |
| TATGATGTATGCCATGTCTT+GGG | + | chr3.3:49958545-49958564 | MS.gene08114:intron | 35.0% | |
| TCAACTGTATGGAATACCAT+GGG | + | chr3.3:49961433-49961452 | MS.gene08114:CDS | 35.0% | |
| TCACATAAGCATGAGATTTG+TGG | - | chr3.3:49958224-49958243 | None:intergenic | 35.0% | |
| TCATGTTTCACTCAGTAATG+AGG | - | chr3.3:49960437-49960456 | None:intergenic | 35.0% | |
| TGAAGGTAATAGAAGAATGG+TGG | - | chr3.3:49957974-49957993 | None:intergenic | 35.0% | |
| TGACATTACATGAGGGAAAA+AGG | + | chr3.3:49960899-49960918 | MS.gene08114:intron | 35.0% | |
| TGGATTCTATGTTACTGTTG+CGG | + | chr3.3:49958338-49958357 | MS.gene08114:CDS | 35.0% | |
| TGTAAAAAATGTCCAGCAAC+TGG | + | chr3.3:49959214-49959233 | MS.gene08114:intron | 35.0% | |
| ! | AACCTTTTGCCAATGTATCA+AGG | - | chr3.3:49960964-49960983 | None:intergenic | 35.0% |
| ! | ATCTCTGTCCGGAAAAATTT+TGG | - | chr3.3:49961721-49961740 | None:intergenic | 35.0% |
| ! | GCATAAAGTTTATGGTGGAA+AGG | + | chr3.3:49960509-49960528 | MS.gene08114:intron | 35.0% |
| ! | GGTTGAAGAAATTTTACAGG+AGG | - | chr3.3:49959293-49959312 | None:intergenic | 35.0% |
| ! | GTTTGCTACAAAAAGGTTTG+GGG | - | chr3.3:49960684-49960703 | None:intergenic | 35.0% |
| ! | TGAAAGGGGCATAAAGTTTA+TGG | + | chr3.3:49960501-49960520 | MS.gene08114:intron | 35.0% |
| ! | TGAAGAAATTTTACAGGAGG+AGG | - | chr3.3:49959290-49959309 | None:intergenic | 35.0% |
| ! | TTTAACTTTGGAAAGGCAGA+TGG | + | chr3.3:49961082-49961101 | MS.gene08114:intron | 35.0% |
| !! | AAAAAGTACCAGAAGACACA+TGG | + | chr3.3:49958019-49958038 | MS.gene08114:CDS | 35.0% |
| !! | AGTGTGTTGTTCTTAGCTTT+TGG | + | chr3.3:49961859-49961878 | MS.gene08114:CDS | 35.0% |
| !! | ATTGTTTGTTGTTTCGCTCT+TGG | + | chr3.3:49958263-49958282 | MS.gene08114:CDS | 35.0% |
| !! | GGTTTGCTACAAAAAGGTTT+GGG | - | chr3.3:49960685-49960704 | None:intergenic | 35.0% |
| !! | GTCTATCATCTCTTGGTTTT+GGG | + | chr3.3:49961894-49961913 | MS.gene08114:CDS | 35.0% |
| !! | TTGTTTTTCCCTCTCTTCTT+AGG | + | chr3.3:49961682-49961701 | MS.gene08114:CDS | 35.0% |
| !! | TTTGGGAAAGTGCTGAAAAT+GGG | - | chr3.3:49959314-49959333 | None:intergenic | 35.0% |
| !!! | ACATTTTTTACATTGGGCCT+GGG | - | chr3.3:49959206-49959225 | None:intergenic | 35.0% |
| !!! | TGTGTTTTAGGGCTTACAAA+TGG | + | chr3.3:49961760-49961779 | MS.gene08114:CDS | 35.0% |
| !!! | TTTTGGGAAAGTGCTGAAAA+TGG | - | chr3.3:49959315-49959334 | None:intergenic | 35.0% |
| AAACTTTATGCCCCTTTCAG+AGG | - | chr3.3:49960500-49960519 | None:intergenic | 40.0% | |
| AACACCCATCCTTACAAAAC+CGG | - | chr3.3:49959744-49959763 | None:intergenic | 40.0% | |
| AAGCATAGATGTCCTCTGAA+AGG | + | chr3.3:49960485-49960504 | MS.gene08114:intron | 40.0% | |
| AATCCTTAAGATGTTGGGAG+TGG | - | chr3.3:49961543-49961562 | None:intergenic | 40.0% | |
| ACAATCAAGTGGTATGGGTT+TGG | + | chr3.3:49961457-49961476 | MS.gene08114:CDS | 40.0% | |
| ACACAAGTCAGTATTGTGAC+AGG | - | chr3.3:49961745-49961764 | None:intergenic | 40.0% | |
| ACACCAAGTACAATAGTGCT+GGG | + | chr3.3:49959827-49959846 | MS.gene08114:intron | 40.0% | |
| ACCTTCAGATTCAGAAGCTT+CGG | + | chr3.3:49957987-49958006 | MS.gene08114:CDS | 40.0% | |
| ACTCCCAACATCTTAAGGAT+TGG | + | chr3.3:49961542-49961561 | MS.gene08114:CDS | 40.0% | |
| AGCATTCGGTCTTCAATTTC+CGG | + | chr3.3:49958766-49958785 | MS.gene08114:intron | 40.0% | |
| AGGAGGAAGATGTTGATATC+AGG | - | chr3.3:49959244-49959263 | None:intergenic | 40.0% | |
| AGTACTAGTACTACGAACCA+AGG | - | chr3.3:49958902-49958921 | None:intergenic | 40.0% | |
| ATACAGTGTGTGTGTGTAAC+AGG | + | chr3.3:49959616-49959635 | MS.gene08114:intron | 40.0% | |
| ATACCACTTGATTGTTCCCA+TGG | - | chr3.3:49961452-49961471 | None:intergenic | 40.0% | |
| ATACCATGGGAACAATCAAG+TGG | + | chr3.3:49961446-49961465 | MS.gene08114:CDS | 40.0% | |
| ATATGATGTGAGAATGGGAG+TGG | + | chr3.3:49958714-49958733 | MS.gene08114:intron | 40.0% | |
| ATGATGTATGCCATGTCTTG+GGG | + | chr3.3:49958546-49958565 | MS.gene08114:intron | 40.0% | |
| ATGGGAACAATCAAGTGGTA+TGG | + | chr3.3:49961451-49961470 | MS.gene08114:CDS | 40.0% | |
| ATGGGAGTGGGAAAACTATT+AGG | + | chr3.3:49958727-49958746 | MS.gene08114:intron | 40.0% | |
| ATTCTATGTTACTGTTGCGG+CGG | + | chr3.3:49958341-49958360 | MS.gene08114:CDS | 40.0% | |
| ATTCTCTAGTAGGTATACCG+CGG | - | chr3.3:49961626-49961645 | None:intergenic | 40.0% | |
| ATTTCCTGGTTTCATTACCG+AGG | + | chr3.3:49961513-49961532 | MS.gene08114:CDS | 40.0% | |
| CACCTTGATACATTGGCAAA+AGG | + | chr3.3:49960959-49960978 | MS.gene08114:intron | 40.0% | |
| CAGCCTTTGTAAATATCCTC+AGG | - | chr3.3:49961216-49961235 | None:intergenic | 40.0% | |
| CAGTGATTGCAATGATACTC+CGG | + | chr3.3:49960784-49960803 | MS.gene08114:intron | 40.0% | |
| CATAAGCATGAGATTTGTGG+CGG | - | chr3.3:49958221-49958240 | None:intergenic | 40.0% | |
| CATTACATGAGGGAAAAAGG+TGG | + | chr3.3:49960902-49960921 | MS.gene08114:intron | 40.0% | |
| CCATCTCACATTGGATAGAT+AGG | + | chr3.3:49959671-49959690 | MS.gene08114:intron | 40.0% | |
| CCTATCTATCCAATGTGAGA+TGG | - | chr3.3:49959674-49959693 | None:intergenic | 40.0% | |
| CTAAGCACTACCAACTACTA+AGG | - | chr3.3:49960136-49960155 | None:intergenic | 40.0% | |
| GATCACTTCATCACATACCT+AGG | - | chr3.3:49960114-49960133 | None:intergenic | 40.0% | |
| GCTTATGTGAGGATCAATGT+TGG | + | chr3.3:49958234-49958253 | MS.gene08114:CDS | 40.0% | |
| GGAGGAAGATGTTGATATCA+GGG | - | chr3.3:49959243-49959262 | None:intergenic | 40.0% | |
| GTATGATGTATGCCATGTCT+TGG | + | chr3.3:49958544-49958563 | MS.gene08114:intron | 40.0% | |
| GTGACACTTGCAATATTTCC+TGG | + | chr3.3:49961499-49961518 | MS.gene08114:CDS | 40.0% | |
| GTTCCTGTGACAATTTCAAC+TGG | + | chr3.3:49961000-49961019 | MS.gene08114:intron | 40.0% | |
| TACGCGACATGAGAAGAATT+CGG | + | chr3.3:49958847-49958866 | MS.gene08114:intron | 40.0% | |
| TATAGAACTTTGGTACGCCT+TGG | + | chr3.3:49958882-49958901 | MS.gene08114:intron | 40.0% | |
| TATGATGTGAGAATGGGAGT+GGG | + | chr3.3:49958715-49958734 | MS.gene08114:intron | 40.0% | |
| TGCAATCACTGTTTGTGCAT+TGG | - | chr3.3:49960775-49960794 | None:intergenic | 40.0% | |
| TGGGAACAATCAAGTGGTAT+GGG | + | chr3.3:49961452-49961471 | MS.gene08114:CDS | 40.0% | |
| TGGTATCAGAGTCTATCGAT+CGG | + | chr3.3:49959780-49959799 | MS.gene08114:intron | 40.0% | |
| TGTGGTTTATGTTAAGGGTC+GGG | + | chr3.3:49958302-49958321 | MS.gene08114:CDS | 40.0% | |
| TGTGGTTTCTGTCTGTTAAG+TGG | + | chr3.3:49960265-49960284 | MS.gene08114:intron | 40.0% | |
| TTACATGAGGGAAAAAGGTG+GGG | + | chr3.3:49960904-49960923 | MS.gene08114:intron | 40.0% | |
| TTTACTGGGATATCAACTGG+TGG | - | chr3.3:49960651-49960670 | None:intergenic | 40.0% | |
| TTTATGTTAAGGGTCGGGTT+GGG | + | chr3.3:49958307-49958326 | MS.gene08114:CDS | 40.0% | |
| ! | AAGAAGAAAGAGTGTGTGCA+AGG | + | chr3.3:49960409-49960428 | MS.gene08114:intron | 40.0% |
| ! | AAGGGGCATAAAGTTTATGG+TGG | + | chr3.3:49960504-49960523 | MS.gene08114:intron | 40.0% |
| ! | ACCAGTTGATATCCCAGTAA+AGG | + | chr3.3:49960650-49960669 | MS.gene08114:intron | 40.0% |
| ! | AGAAATTTTACAGGAGGAGG+AGG | - | chr3.3:49959287-49959306 | None:intergenic | 40.0% |
| ! | AGAGATTTGCACTCTTTTGC+AGG | - | chr3.3:49961261-49961280 | None:intergenic | 40.0% |
| ! | AGCATAGATGTCCTCTGAAA+GGG | + | chr3.3:49960486-49960505 | MS.gene08114:intron | 40.0% |
| ! | CCAGTTGATATCCCAGTAAA+GGG | + | chr3.3:49960651-49960670 | MS.gene08114:intron | 40.0% |
| ! | GGTCTATCATCTCTTGGTTT+TGG | + | chr3.3:49961893-49961912 | MS.gene08114:CDS | 40.0% |
| ! | GTAAGGCACCAACACAAAAA+CGG | - | chr3.3:49958687-49958706 | None:intergenic | 40.0% |
| ! | GTGTGTATATAAATGGTGGG+TGG | - | chr3.3:49959807-49959826 | None:intergenic | 40.0% |
| ! | TGCACGGTCCAAAATTTTTC+CGG | + | chr3.3:49961710-49961729 | MS.gene08114:CDS | 40.0% |
| ! | TGCTGCAGCTTTACAGTTTT+AGG | - | chr3.3:49961817-49961836 | None:intergenic | 40.0% |
| !! | CATTCTGAGGTGAAACATTG+TGG | + | chr3.3:49960247-49960266 | MS.gene08114:intron | 40.0% |
| !! | CGGTTTGCTACAAAAAGGTT+TGG | - | chr3.3:49960686-49960705 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr3.3:49959928-49959947 | MS.gene08114:intron | 40.0% |
| !! | CTTAGTAGTTGGTAGTGCTT+AGG | + | chr3.3:49960134-49960153 | MS.gene08114:intron | 40.0% |
| !! | GTTGTTCTTAGCTTTTGGTC+TGG | + | chr3.3:49961864-49961883 | MS.gene08114:CDS | 40.0% |
| !! | TGTCTCGGTTTGCTACAAAA+AGG | - | chr3.3:49960691-49960710 | None:intergenic | 40.0% |
| !!! | AAATTTTTTGCCGGTTCCTG+TGG | + | chr3.3:49959432-49959451 | MS.gene08114:intron | 40.0% |
| !!! | GACATTTTTTACATTGGGCC+TGG | - | chr3.3:49959207-49959226 | None:intergenic | 40.0% |
| AACGACAATGGTCCTTTGAC+TGG | + | chr3.3:49961397-49961416 | MS.gene08114:CDS | 45.0% | |
| ACACCCAGCACTATTGTACT+TGG | - | chr3.3:49959833-49959852 | None:intergenic | 45.0% | |
| ACACTCCTTTCCTTACAAGC+CGG | + | chr3.3:49959722-49959741 | MS.gene08114:intron | 45.0% | |
| ACATCCTCGGTAATGAAACC+AGG | - | chr3.3:49961520-49961539 | None:intergenic | 45.0% | |
| ACCAACAAGACTAGATAGCG+AGG | - | chr3.3:49958178-49958197 | None:intergenic | 45.0% | |
| ACCAAGTTCCATGTGTCTTC+TGG | - | chr3.3:49958030-49958049 | None:intergenic | 45.0% | |
| ACCAGAAGACACATGGAACT+TGG | + | chr3.3:49958026-49958045 | MS.gene08114:CDS | 45.0% | |
| ACTGTTTGTGCATTGGATGC+TGG | - | chr3.3:49960768-49960787 | None:intergenic | 45.0% | |
| AGAAGAATTCGGTACGTCTG+GGG | + | chr3.3:49958858-49958877 | MS.gene08114:intron | 45.0% | |
| AGCAAAGATACGGTCAACAC+TGG | - | chr3.3:49958148-49958167 | None:intergenic | 45.0% | |
| ATATCAGGGTTTCCAGTTGC+TGG | - | chr3.3:49959229-49959248 | None:intergenic | 45.0% | |
| ATATCCAAGAAGAGAGTGGC+CGG | - | chr3.3:49959581-49959600 | None:intergenic | 45.0% | |
| ATTATGGGCCAAACAAACCC+AGG | + | chr3.3:49959186-49959205 | MS.gene08114:intron | 45.0% | |
| CACACCAAGTACAATAGTGC+TGG | + | chr3.3:49959826-49959845 | MS.gene08114:intron | 45.0% | |
| CACATAATTCGTCGGAACAG+TGG | - | chr3.3:49959550-49959569 | None:intergenic | 45.0% | |
| CATGAGATTTGTGGCGGTTA+AGG | - | chr3.3:49958215-49958234 | None:intergenic | 45.0% | |
| CCCTTTACTGGGATATCAAC+TGG | - | chr3.3:49960654-49960673 | None:intergenic | 45.0% | |
| CCTTCAGATTCAGAAGCTTC+GGG | + | chr3.3:49957988-49958007 | MS.gene08114:CDS | 45.0% | |
| CGAATTATGTGACTATGGGC+CGG | - | chr3.3:49958788-49958807 | None:intergenic | 45.0% | |
| CTCTTCTTAGGATGCTTGCA+CGG | + | chr3.3:49961694-49961713 | MS.gene08114:CDS | 45.0% | |
| CTGCTCAATTGAGTGAAAGG+AGG | - | chr3.3:49959261-49959280 | None:intergenic | 45.0% | |
| CTGTCTGGAGATCAACTGTA+TGG | + | chr3.3:49961422-49961441 | MS.gene08114:CDS | 45.0% | |
| CTTCAGATTCAGAAGCTTCG+GGG | + | chr3.3:49957989-49958008 | MS.gene08114:CDS | 45.0% | |
| GAGAAGAATTCGGTACGTCT+GGG | + | chr3.3:49958857-49958876 | MS.gene08114:intron | 45.0% | |
| GCAAGCATCCTAAGAAGAGA+GGG | - | chr3.3:49961693-49961712 | None:intergenic | 45.0% | |
| GCGAATTCGTCAACGAATTC+AGG | + | chr3.3:49959468-49959487 | MS.gene08114:intron | 45.0% | |
| GGAACAGCACCTTGATACAT+TGG | + | chr3.3:49960952-49960971 | MS.gene08114:intron | 45.0% | |
| GGTAGTTCCATTGCTTGATG+TGG | + | chr3.3:49958284-49958303 | MS.gene08114:CDS | 45.0% | |
| GGTATCAGAGTCTATCGATC+GGG | + | chr3.3:49959781-49959800 | MS.gene08114:intron | 45.0% | |
| GTTTACACACAAGATGCCTC+CGG | + | chr3.3:49961235-49961254 | MS.gene08114:CDS | 45.0% | |
| GTTTATGTTAAGGGTCGGGT+TGG | + | chr3.3:49958306-49958325 | MS.gene08114:CDS | 45.0% | |
| TACATGAGGGAAAAAGGTGG+GGG | + | chr3.3:49960905-49960924 | MS.gene08114:intron | 45.0% | |
| TGAGAAGAATTCGGTACGTC+TGG | + | chr3.3:49958856-49958875 | MS.gene08114:intron | 45.0% | |
| TGATGTATGCCATGTCTTGG+GGG | + | chr3.3:49958547-49958566 | MS.gene08114:intron | 45.0% | |
| TGCAAGCATCCTAAGAAGAG+AGG | - | chr3.3:49961694-49961713 | None:intergenic | 45.0% | |
| TGGTGCAGGGATCTATTCTT+GGG | + | chr3.3:49958391-49958410 | MS.gene08114:CDS | 45.0% | |
| TGTCCACTCCCAACATCTTA+AGG | + | chr3.3:49961537-49961556 | MS.gene08114:CDS | 45.0% | |
| TTCTGGTGTGGCTAATGGTT+TGG | + | chr3.3:49958371-49958390 | MS.gene08114:CDS | 45.0% | |
| TTGGTGCAGGGATCTATTCT+TGG | + | chr3.3:49958390-49958409 | MS.gene08114:CDS | 45.0% | |
| TTGTGACAGGAATCTCTGTC+CGG | - | chr3.3:49961732-49961751 | None:intergenic | 45.0% | |
| ! | AATTTTACAGGAGGAGGAGG+CGG | - | chr3.3:49959284-49959303 | None:intergenic | 45.0% |
| ! | ATTTGCACTCTTTTGCAGGC+CGG | - | chr3.3:49961257-49961276 | None:intergenic | 45.0% |
| ! | GCATAGATGTCCTCTGAAAG+GGG | + | chr3.3:49960487-49960506 | MS.gene08114:intron | 45.0% |
| ! | GGGTTCTTGTTTCTTTCCTG+AGG | + | chr3.3:49961197-49961216 | MS.gene08114:CDS | 45.0% |
| ! | TACAATAGTGCTGGGTGTGA+GGG | + | chr3.3:49959835-49959854 | MS.gene08114:intron | 45.0% |
| ! | TGAAATGGAGCGTCATTCTG+AGG | + | chr3.3:49960234-49960253 | MS.gene08114:intron | 45.0% |
| ! | TGGTAGTGCTTAGGTATCTC+AGG | + | chr3.3:49960143-49960162 | MS.gene08114:intron | 45.0% |
| ! | TTTTTGTGATGTGGCTGCCT+AGG | + | chr3.3:49960094-49960113 | MS.gene08114:intron | 45.0% |
| !! | ACAAGCCGGTTTTGTAAGGA+TGG | + | chr3.3:49959736-49959755 | MS.gene08114:intron | 45.0% |
| !! | CAAAACCGGCTTGTAAGGAA+AGG | - | chr3.3:49959730-49959749 | None:intergenic | 45.0% |
| !! | CAAGCCGGTTTTGTAAGGAT+GGG | + | chr3.3:49959737-49959756 | MS.gene08114:intron | 45.0% |
| !! | CCTAACAAGCCGGTTTTGTA+AGG | + | chr3.3:49959918-49959937 | MS.gene08114:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr3.3:49959735-49959754 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTT+AGG | - | chr3.3:49959921-49959940 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr3.3:49959732-49959751 | MS.gene08114:intron | 45.0% |
| !! | TCCTCGCTATCTAGTCTTGT+TGG | + | chr3.3:49958174-49958193 | MS.gene08114:CDS | 45.0% |
| !! | AATATAATTAAAAATAATCA+AGG | + | chr3.3:49960208-49960227 | MS.gene08114:intron | 5.0% |
| !! | TTATTAAAAAAATTATTGAT+AGG | - | chr3.3:49958944-49958963 | None:intergenic | 5.0% |
| !!! | TTGATTATTTTTAATTATAT+TGG | - | chr3.3:49960209-49960228 | None:intergenic | 5.0% |
| AAAGATTCAGGCAGTCGCTG+TGG | + | chr3.3:49961372-49961391 | MS.gene08114:CDS | 50.0% | |
| AACAAGCGTACCACAGGAAC+CGG | - | chr3.3:49959445-49959464 | None:intergenic | 50.0% | |
| AACAGTGGAGAACCGCGAAT+TGG | - | chr3.3:49959535-49959554 | None:intergenic | 50.0% | |
| ACACGCAGGCTGTCATTGTT+GGG | + | chr3.3:49958439-49958458 | MS.gene08114:CDS | 50.0% | |
| ACCTGCAATTCTCTTGGAGC+AGG | + | chr3.3:49960931-49960950 | MS.gene08114:intron | 50.0% | |
| ATACGGTCAACACTGGCATG+AGG | - | chr3.3:49958141-49958160 | None:intergenic | 50.0% | |
| ATGTTGGGAGTGGACATCCT+CGG | - | chr3.3:49961533-49961552 | None:intergenic | 50.0% | |
| CAGTGACGAATGCGTTCCAT+GGG | - | chr3.3:49958092-49958111 | None:intergenic | 50.0% | |
| CCCGAAGCTTCTGAATCTGA+AGG | - | chr3.3:49957991-49958010 | None:intergenic | 50.0% | |
| CGGCTGCTCAATTGAGTGAA+AGG | - | chr3.3:49959264-49959283 | None:intergenic | 50.0% | |
| CTCCAGACAGATCCAGTCAA+AGG | - | chr3.3:49961412-49961431 | None:intergenic | 50.0% | |
| CTGCTGGGTCTATCATCTCT+TGG | + | chr3.3:49961887-49961906 | MS.gene08114:CDS | 50.0% | |
| GAAGAATTCGGTACGTCTGG+GGG | + | chr3.3:49958859-49958878 | MS.gene08114:intron | 50.0% | |
| GGATCTATTCTTGGGTCTGC+CGG | + | chr3.3:49958399-49958418 | MS.gene08114:CDS | 50.0% | |
| GGGAGAACCTGCAATTCTCT+TGG | + | chr3.3:49960925-49960944 | MS.gene08114:intron | 50.0% | |
| GTCCTTTGACTGGATCTGTC+TGG | + | chr3.3:49961407-49961426 | MS.gene08114:CDS | 50.0% | |
| GTCGCTGTGGAAAACGACAA+TGG | + | chr3.3:49961385-49961404 | MS.gene08114:CDS | 50.0% | |
| TACACGCAGGCTGTCATTGT+TGG | + | chr3.3:49958438-49958457 | MS.gene08114:CDS | 50.0% | |
| TACCTAACACCCCCAAGACA+TGG | - | chr3.3:49958559-49958578 | None:intergenic | 50.0% | |
| TACGGTCAACACTGGCATGA+GGG | - | chr3.3:49958140-49958159 | None:intergenic | 50.0% | |
| TAGTAGGTATACCGCGGTCA+GGG | - | chr3.3:49961620-49961639 | None:intergenic | 50.0% | |
| TCCTGCTCCAAGAGAATTGC+AGG | - | chr3.3:49960935-49960954 | None:intergenic | 50.0% | |
| TTCGCGGTTCTTTGGCGTAT+TGG | - | chr3.3:49959498-49959517 | None:intergenic | 50.0% | |
| ! | ACAATAGTGCTGGGTGTGAG+GGG | + | chr3.3:49959836-49959855 | MS.gene08114:intron | 50.0% |
| ! | ACATTGGGCCTGGGTTTGTT+TGG | - | chr3.3:49959197-49959216 | None:intergenic | 50.0% |
| ! | CGTCTGGGGGTATAGAACTT+TGG | + | chr3.3:49958872-49958891 | MS.gene08114:intron | 50.0% |
| ! | GTACAATAGTGCTGGGTGTG+AGG | + | chr3.3:49959834-49959853 | MS.gene08114:intron | 50.0% |
| ! | TAGCTTTTGGTCTGGCTGCT+GGG | + | chr3.3:49961872-49961891 | MS.gene08114:CDS | 50.0% |
| ! | TGTTGGTAAATCCCTGACCG+CGG | + | chr3.3:49961606-49961625 | MS.gene08114:CDS | 50.0% |
| !! | CAAAACCGGCTTGTTAGGAG+AGG | - | chr3.3:49959916-49959935 | None:intergenic | 50.0% |
| !! | GCATCGGTTACTTGTTCCCA+TGG | + | chr3.3:49958073-49958092 | MS.gene08114:CDS | 50.0% |
| !! | GGTCGGGTTGGGTTGTATAA+TGG | + | chr3.3:49958318-49958337 | MS.gene08114:CDS | 50.0% |
| !! | GTGGCTAATGGTTTGGTGCA+GGG | + | chr3.3:49958378-49958397 | MS.gene08114:CDS | 50.0% |
| !! | GTGGTTTCTGGTGTGGCTAA+TGG | + | chr3.3:49958366-49958385 | MS.gene08114:CDS | 50.0% |
| !! | TGTGGCTAATGGTTTGGTGC+AGG | + | chr3.3:49958377-49958396 | MS.gene08114:CDS | 50.0% |
| !! | TTAGCTTTTGGTCTGGCTGC+TGG | + | chr3.3:49961871-49961890 | MS.gene08114:CDS | 50.0% |
| CGCAGAAACAAGCGTACCAC+AGG | - | chr3.3:49959451-49959470 | None:intergenic | 55.0% | |
| CTAGTAGGTATACCGCGGTC+AGG | - | chr3.3:49961621-49961640 | None:intergenic | 55.0% | |
| GCACTCCTCTCCTAACAAGC+CGG | + | chr3.3:49959908-49959927 | MS.gene08114:intron | 55.0% | |
| GCAGTGACGAATGCGTTCCA+TGG | - | chr3.3:49958093-49958112 | None:intergenic | 55.0% | |
| GCGAATTGGTACGCGAGAAC+CGG | - | chr3.3:49959521-49959540 | None:intergenic | 55.0% | |
| GGGGCACATGTCCCTTTACT+GGG | - | chr3.3:49960665-49960684 | None:intergenic | 55.0% | |
| GGTTCTCGCGTACCAATTCG+CGG | + | chr3.3:49959520-49959539 | MS.gene08114:intron | 55.0% | |
| GTTCGCTTCGGTACGTGGTA+CGG | + | chr3.3:49958810-49958829 | MS.gene08114:intron | 55.0% | |
| TACGCCAAAGAACCGCGAAC+CGG | + | chr3.3:49959499-49959518 | MS.gene08114:intron | 55.0% | |
| TCGTAGTTCGCTTCGGTACG+TGG | + | chr3.3:49958805-49958824 | MS.gene08114:intron | 55.0% | |
| TGCAGCATGCAGAGACTGCA+GGG | + | chr3.3:49961830-49961849 | MS.gene08114:CDS | 55.0% | |
| TGGGGCACATGTCCCTTTAC+TGG | - | chr3.3:49960666-49960685 | None:intergenic | 55.0% | |
| TGTTACTGTTGCGGCGGTTG+TGG | + | chr3.3:49958347-49958366 | MS.gene08114:CDS | 55.0% | |
| TGTTCCGGCCACTCTCTTCT+TGG | + | chr3.3:49959574-49959593 | MS.gene08114:intron | 55.0% | |
| TTCGCTTCGGTACGTGGTAC+GGG | + | chr3.3:49958811-49958830 | MS.gene08114:intron | 55.0% | |
| TTCGGTACGTGGTACGGGTT+CGG | + | chr3.3:49958816-49958835 | MS.gene08114:intron | 55.0% | |
| ! | CAATAGTGCTGGGTGTGAGG+GGG | + | chr3.3:49959837-49959856 | MS.gene08114:intron | 55.0% |
| ! | TGGGTGTGAGGGGGTGTATT+GGG | + | chr3.3:49959846-49959865 | MS.gene08114:intron | 55.0% |
| !! | AGAACCGGTTCGCGGTTCTT+TGG | - | chr3.3:49959506-49959525 | None:intergenic | 55.0% |
| !! | ATTGTTGGGAGTGCTGCCTC+TGG | + | chr3.3:49958453-49958472 | MS.gene08114:CDS | 55.0% |
| !! | TGCCATGTCTTGGGGGTGTT+AGG | + | chr3.3:49958554-49958573 | MS.gene08114:intron | 55.0% |
| !!! | TCGGGCAGCCGTTTTTGTGT+TGG | + | chr3.3:49958676-49958695 | MS.gene08114:intron | 55.0% |
| ACAGCCTGCGTGTACCTCTC+CGG | - | chr3.3:49958432-49958451 | None:intergenic | 60.0% | |
| CTGCAGCATGCAGAGACTGC+AGG | + | chr3.3:49961829-49961848 | MS.gene08114:CDS | 60.0% | |
| GTACCTCTCCGGCAACTCAC+CGG | - | chr3.3:49958421-49958440 | None:intergenic | 60.0% | |
| GTTGCGGCGGTTGTGGTTTC+TGG | + | chr3.3:49958354-49958373 | MS.gene08114:CDS | 60.0% | |
| TCGGTACGTGGTACGGGTTC+GGG | + | chr3.3:49958817-49958836 | MS.gene08114:intron | 60.0% | |
| ! | CTGGGTGTGAGGGGGTGTAT+TGG | + | chr3.3:49959845-49959864 | MS.gene08114:intron | 60.0% |
| ! | TGCACTCTTTTGCAGGCCGG+AGG | - | chr3.3:49961254-49961273 | None:intergenic | 60.0% |
| !! | GGCGGTTGTGGTTTCTGGTG+TGG | + | chr3.3:49958359-49958378 | MS.gene08114:CDS | 60.0% |
| GTGGTACGGGTTCGGGTACG+CGG | + | chr3.3:49958824-49958843 | MS.gene08114:intron | 65.0% | |
| TGGGTCTGCCGGTGAGTTGC+CGG | + | chr3.3:49958410-49958429 | MS.gene08114:CDS | 65.0% | |
| ! | GTTGCCGGAGAGGTACACGC+AGG | + | chr3.3:49958425-49958444 | MS.gene08114:CDS | 65.0% |
| !! | GGTACGCGAGAACCGGTTCG+CGG | - | chr3.3:49959514-49959533 | None:intergenic | 65.0% |
| CTGCCGGTGAGTTGCCGGAG+AGG | + | chr3.3:49958415-49958434 | MS.gene08114:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 49957931 | 49961924 | 49957931 | ID=MS.gene08114 |
| chr3.3 | mRNA | 49957931 | 49961924 | 49957931 | ID=MS.gene08114.t1;Parent=MS.gene08114 |
| chr3.3 | exon | 49957931 | 49958474 | 49957931 | ID=MS.gene08114.t1.exon1;Parent=MS.gene08114.t1 |
| chr3.3 | CDS | 49957931 | 49958474 | 49957931 | ID=cds.MS.gene08114.t1;Parent=MS.gene08114.t1 |
| chr3.3 | exon | 49961197 | 49961924 | 49961197 | ID=MS.gene08114.t1.exon2;Parent=MS.gene08114.t1 |
| chr3.3 | CDS | 49961197 | 49961924 | 49961197 | ID=cds.MS.gene08114.t1;Parent=MS.gene08114.t1 |
| Gene Sequence |
| Protein sequence |
