Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08289.t1 | RHN42417.1 | 96.6 | 535 | 18 | 0 | 1 | 535 | 1 | 535 | 2.40E-291 | 1010.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08289.t1 | O80505 | 70.9 | 502 | 128 | 1 | 31 | 532 | 22 | 505 | 7.3e-212 | 738.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08289.t1 | A0A396GUX5 | 96.6 | 535 | 18 | 0 | 1 | 535 | 1 | 535 | 1.7e-291 | 1010.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050111 | MS.gene08289 | 0.848913 | 4.53E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08289 | MS.gene070560 | PPI |
| MS.gene08289 | MS.gene77418 | PPI |
| MS.gene032882 | MS.gene08289 | PPI |
| MS.gene55207 | MS.gene08289 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08289.t1 | MTR_5g077540 | 93.084 | 535 | 17 | 1 | 1 | 535 | 1 | 515 | 0.0 | 1001 |
| MS.gene08289.t1 | MTR_6g017315 | 30.677 | 251 | 152 | 7 | 43 | 277 | 67 | 311 | 2.20e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08289.t1 | AT2G44660 | 69.615 | 520 | 140 | 1 | 13 | 532 | 4 | 505 | 0.0 | 728 |
| MS.gene08289.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 7.49e-25 | 108 |
| MS.gene08289.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 7.49e-25 | 108 |
Find 121 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTTGTCTCTTCTTTA+TGG | 0.059585 | 4.2:+15383862 | MS.gene08289:CDS |
| GTTGATTTCACTTTCGTATT+TGG | 0.171552 | 4.2:+15384017 | MS.gene08289:CDS |
| CTGATTTGTCTCTTCTTTAT+GGG | 0.190540 | 4.2:+15383863 | MS.gene08289:CDS |
| TTATAGACTTACTAGGAATT+TGG | 0.215734 | 4.2:+15383888 | MS.gene08289:CDS |
| CTTTAGTCGACTCTTGATTA+TGG | 0.218008 | 4.2:+15384173 | MS.gene08289:CDS |
| TGTTGGGGTGGAATTGTAAA+AGG | 0.236657 | 4.2:+15384150 | MS.gene08289:CDS |
| GCAGTGTTTGCATCCGCATT+TGG | 0.260423 | 4.2:+15384210 | MS.gene08289:CDS |
| ACCCGAGGTAGAACACTAAA+AGG | 0.263152 | 4.2:-15385278 | None:intergenic |
| AACTACCTTTAGATTCAAAT+TGG | 0.264867 | 4.2:-15387634 | None:intergenic |
| CGAGAAAGCAAAAGTTGATT+TGG | 0.269970 | 4.2:+15383914 | MS.gene08289:CDS |
| TGATTTGGTCGTTGGTTATT+TGG | 0.291950 | 4.2:+15383929 | MS.gene08289:CDS |
| AGTGCGGATGTGAGGAATAA+TGG | 0.296933 | 4.2:+15387659 | MS.gene08289:CDS |
| GTCTTGTAGTTGTAGAGATA+TGG | 0.316331 | 4.2:+15387720 | MS.gene08289:CDS |
| AAAATATGACAGTAAATCTT+TGG | 0.322386 | 4.2:-15383840 | None:intergenic |
| CAGTGTTTGCATCCGCATTT+GGG | 0.337345 | 4.2:+15384211 | MS.gene08289:CDS |
| TCCATCCGTGACATTTATAA+TGG | 0.338338 | 4.2:+15386596 | MS.gene08289:CDS |
| CAATACAATGGATTTCTCAT+TGG | 0.356779 | 4.2:+15383988 | MS.gene08289:CDS |
| AATACAATGGATTTCTCATT+GGG | 0.357750 | 4.2:+15383989 | MS.gene08289:CDS |
| TTTGTTGAGGCACTATTGTT+GGG | 0.365288 | 4.2:+15384134 | MS.gene08289:CDS |
| CTTGATTGAGAAGATATATC+TGG | 0.366761 | 4.2:+15387694 | MS.gene08289:CDS |
| TTTAGTCGACTCTTGATTAT+GGG | 0.371488 | 4.2:+15384174 | MS.gene08289:CDS |
| ATTTGTTGAGGCACTATTGT+TGG | 0.375498 | 4.2:+15384133 | MS.gene08289:CDS |
| AACGATTGTTTCCATTTGGC+AGG | 0.385919 | 4.2:+15385108 | MS.gene08289:CDS |
| CTAGTAATCCTTTGTGGCCG+TGG | 0.386080 | 4.2:-15386663 | None:intergenic |
| AAAGCCAGACCACATCAAAA+TGG | 0.393622 | 4.2:-15387546 | None:intergenic |
| TCCTAAAATAGTGCACCTTC+AGG | 0.394307 | 4.2:+15383780 | MS.gene08289:CDS |
| TGAATGAAGCTGCTGGTGTC+TGG | 0.395897 | 4.2:-15385229 | None:intergenic |
| ATCTCTGTATACTGTGCTCT+GGG | 0.396880 | 4.2:+15387803 | MS.gene08289:CDS |
| GGGGCTTTGCCATGCATACT+GGG | 0.398330 | 4.2:+15385130 | MS.gene08289:CDS |
| GCCTTCCTACTCAGAAAACT+TGG | 0.399995 | 4.2:+15385197 | MS.gene08289:CDS |
| GATCTCTGTATACTGTGCTC+TGG | 0.401154 | 4.2:+15387802 | MS.gene08289:CDS |
| GGATCATGTACTCTTGGATA+TGG | 0.409280 | 4.2:+15387825 | MS.gene08289:CDS |
| CTCTGGGGATCATGTACTCT+TGG | 0.411393 | 4.2:+15387819 | MS.gene08289:CDS |
| TCTTGTAGTTGTAGAGATAT+GGG | 0.420668 | 4.2:+15387721 | MS.gene08289:CDS |
| ATCCAACGATTGTTTCCATT+TGG | 0.422788 | 4.2:+15385104 | MS.gene08289:CDS |
| AGGCGAGTGGAATTACAAAA+TGG | 0.425510 | 4.2:-15386752 | None:intergenic |
| ACTTTGAGGTGCACCGCAAT+TGG | 0.429070 | 4.2:+15383629 | MS.gene08289:CDS |
| CAATGAGAAATCCATTGTAT+TGG | 0.430292 | 4.2:-15383987 | None:intergenic |
| ATGGGGTTTATAGACTTACT+AGG | 0.435029 | 4.2:+15383881 | MS.gene08289:CDS |
| GAGGAAGGAAGGGATTTGTT+AGG | 0.443108 | 4.2:+15384039 | MS.gene08289:CDS |
| GCAAAAGTTGATTTGGTCGT+TGG | 0.444287 | 4.2:+15383921 | MS.gene08289:CDS |
| TTACCGTAGTACAGACTTTG+AGG | 0.448967 | 4.2:+15383615 | MS.gene08289:CDS |
| AAGTTAATGAGATTTAACTA+TGG | 0.453461 | 4.2:-15387858 | None:intergenic |
| TCATTCACTGCAGGGCTAGT+AGG | 0.458683 | 4.2:+15385245 | MS.gene08289:CDS |
| CGGGGTTTGTGCTGCAACAA+AGG | 0.460841 | 4.2:-15386772 | None:intergenic |
| TTTGAATTATAGCTCGAATA+CGG | 0.465209 | 4.2:+15383807 | MS.gene08289:CDS |
| TGAGGTGCACCGCAATTGGC+TGG | 0.473857 | 4.2:+15383633 | MS.gene08289:CDS |
| TACTACGGTAAGACGGGAAA+AGG | 0.474296 | 4.2:-15383603 | None:intergenic |
| ATCCATCTAGTAATCCTTTG+TGG | 0.486113 | 4.2:-15386669 | None:intergenic |
| CCCGAGGTAGAACACTAAAA+GGG | 0.487237 | 4.2:-15385277 | None:intergenic |
| TGATTTGTCTCTTCTTTATG+GGG | 0.493698 | 4.2:+15383864 | MS.gene08289:CDS |
| GTAGCCCGAAAACGACTCTC+TGG | 0.496588 | 4.2:+15383545 | MS.gene08289:CDS |
| GCTGGCCAATTTGAATCTAA+AGG | 0.503438 | 4.2:+15387629 | MS.gene08289:CDS |
| GGCCACAAAGGATTACTAGA+TGG | 0.508254 | 4.2:+15386667 | MS.gene08289:CDS |
| TCAAAGTACCACTGTGAAAG+AGG | 0.509216 | 4.2:-15383673 | None:intergenic |
| GATTTCACTTTCGTATTTGG+AGG | 0.509283 | 4.2:+15384020 | MS.gene08289:CDS |
| CCAGCAGCTTCATTCACTGC+AGG | 0.510812 | 4.2:+15385236 | MS.gene08289:CDS |
| CTTGAAAAGACAAGGAGATA+AGG | 0.519768 | 4.2:-15386628 | None:intergenic |
| AGTATACAGAGATCAACATA+AGG | 0.521972 | 4.2:-15387793 | None:intergenic |
| TTTCGTATTTGGAGGAAGGA+AGG | 0.523282 | 4.2:+15384028 | MS.gene08289:CDS |
| GTATACAGAGATCAACATAA+GGG | 0.524262 | 4.2:-15387792 | None:intergenic |
| CGATTGTTTCCATTTGGCAG+GGG | 0.535880 | 4.2:+15385110 | MS.gene08289:CDS |
| CGAAATATGCAAAGAACGGC+GGG | 0.536379 | 4.2:-15383723 | None:intergenic |
| TTCGTATTTGGAGGAAGGAA+GGG | 0.537577 | 4.2:+15384029 | MS.gene08289:CDS |
| CCTTCCTACTCAGAAAACTT+GGG | 0.538732 | 4.2:+15385198 | MS.gene08289:CDS |
| TCATATTTACCTGTCCAAGA+TGG | 0.540706 | 4.2:-15384242 | None:intergenic |
| TTGAGGCACTATTGTTGGGG+TGG | 0.542164 | 4.2:+15384138 | MS.gene08289:CDS |
| ACGATTGTTTCCATTTGGCA+GGG | 0.544994 | 4.2:+15385109 | MS.gene08289:CDS |
| CTTTGTTGCAGCACAAACCC+CGG | 0.552369 | 4.2:+15386773 | MS.gene08289:CDS |
| TCAAGGCTTGGAAGAATCCA+CGG | 0.552385 | 4.2:+15386646 | MS.gene08289:CDS |
| CTTTAAACATTTATTTGCAG+TGG | 0.553524 | 4.2:+15384089 | MS.gene08289:CDS |
| TCACTTTCGTATTTGGAGGA+AGG | 0.558171 | 4.2:+15384024 | MS.gene08289:CDS |
| AGTACCACTGTGAAAGAGGA+AGG | 0.563847 | 4.2:-15383669 | None:intergenic |
| GTAATCTAGAGTCCACGGAC+TGG | 0.564381 | 4.2:-15383701 | None:intergenic |
| CATGTGCATTTCCAATACAA+TGG | 0.568701 | 4.2:+15383976 | MS.gene08289:CDS |
| AGTCTGTACTACGGTAAGAC+GGG | 0.568977 | 4.2:-15383609 | None:intergenic |
| GATTGTTTCCATTTGGCAGG+GGG | 0.570965 | 4.2:+15385111 | MS.gene08289:CDS |
| AATTTGGGGCCCAGTATGCA+TGG | 0.572693 | 4.2:-15385139 | None:intergenic |
| AAGTCTGTACTACGGTAAGA+CGG | 0.576605 | 4.2:-15383610 | None:intergenic |
| GGAAGAATCCACGGCCACAA+AGG | 0.577318 | 4.2:+15386655 | MS.gene08289:CDS |
| TGCCAAATGGAAACAATCGT+TGG | 0.579040 | 4.2:-15385106 | None:intergenic |
| AGTCGACTCTTGATTATGGG+AGG | 0.581077 | 4.2:+15384177 | MS.gene08289:CDS |
| GTAGTTTAAGTGCGGATGTG+AGG | 0.581167 | 4.2:+15387651 | MS.gene08289:CDS |
| GAAGGAAGGGATTTGTTAGG+TGG | 0.581280 | 4.2:+15384042 | MS.gene08289:CDS |
| TCTTGTGCCTCAAAGAGTAG+TGG | 0.581614 | 4.2:-15387488 | None:intergenic |
| TTCCAAGCCTTGAAAAGACA+AGG | 0.583599 | 4.2:-15386636 | None:intergenic |
| TTGTTGAGGCACTATTGTTG+GGG | 0.588162 | 4.2:+15384135 | MS.gene08289:CDS |
| ACCATTATAAATGTCACGGA+TGG | 0.588372 | 4.2:-15386597 | None:intergenic |
| ATTGAGAAGATATATCTGGT+TGG | 0.589564 | 4.2:+15387698 | MS.gene08289:CDS |
| CATTGTATTGGAAATGCACA+TGG | 0.594864 | 4.2:-15383975 | None:intergenic |
| TAAAATAGTGCACCTTCAGG+AGG | 0.595849 | 4.2:+15383783 | MS.gene08289:CDS |
| CCTGCAGTGAATGAAGCTGC+TGG | 0.597285 | 4.2:-15385236 | None:intergenic |
| AACAAATAAACAAAATACAC+AGG | 0.600934 | 4.2:-15384117 | None:intergenic |
| CAGAACCATTATAAATGTCA+CGG | 0.604638 | 4.2:-15386601 | None:intergenic |
| TGGGTGGCATGTGCATGAGA+AGG | 0.606139 | 4.2:+15386722 | MS.gene08289:CDS |
| TGGTCCACTATTAAAAGCAT+CGG | 0.614371 | 4.2:-15383955 | None:intergenic |
| ATCTAAAGGTAGTTTAAGTG+CGG | 0.614446 | 4.2:+15387643 | MS.gene08289:CDS |
| GGCGGGTAATCTAGAGTCCA+CGG | 0.622748 | 4.2:-15383706 | None:intergenic |
| TTCTATATCATGTCAGACAA+AGG | 0.623344 | 4.2:+15385170 | MS.gene08289:CDS |
| AGCTTATCACCCAAAAGCAG+AGG | 0.625011 | 4.2:-15387758 | None:intergenic |
| AAAATAGTGCACCTTCAGGA+GGG | 0.628508 | 4.2:+15383784 | MS.gene08289:CDS |
| GAATTATAGCTCGAATACGG+CGG | 0.631955 | 4.2:+15383810 | MS.gene08289:CDS |
| CGTTCGAAATATGCAAAGAA+CGG | 0.633662 | 4.2:-15383727 | None:intergenic |
| TCGAAATATGCAAAGAACGG+CGG | 0.641556 | 4.2:-15383724 | None:intergenic |
| CAGCAGCTTCATTCACTGCA+GGG | 0.642240 | 4.2:+15385237 | MS.gene08289:CDS |
| TATAATTCAAACCCTCCTGA+AGG | 0.642863 | 4.2:-15383795 | None:intergenic |
| CCGAGGTAGAACACTAAAAG+GGG | 0.647722 | 4.2:-15385276 | None:intergenic |
| CTTGTAGTTGTAGAGATATG+GGG | 0.647851 | 4.2:+15387722 | MS.gene08289:CDS |
| GCCCGAAAACGACTCTCTGG+TGG | 0.648251 | 4.2:+15383548 | MS.gene08289:CDS |
| GTGTCAATGCCAGCCAATTG+CGG | 0.652158 | 4.2:-15383642 | None:intergenic |
| ATATCATATGCGTATACCTG+TGG | 0.657422 | 4.2:+15386690 | MS.gene08289:CDS |
| AGGTAGAACACTAAAAGGGG+AGG | 0.659639 | 4.2:-15385273 | None:intergenic |
| GTACCACTGTGAAAGAGGAA+GGG | 0.661428 | 4.2:-15383668 | None:intergenic |
| GCACCTCAAAGTCTGTACTA+CGG | 0.663739 | 4.2:-15383618 | None:intergenic |
| TATACAGAGATCAACATAAG+GGG | 0.666217 | 4.2:-15387791 | None:intergenic |
| GCTTATCACCCAAAAGCAGA+GGG | 0.668480 | 4.2:-15387757 | None:intergenic |
| TGTGCTGCAACAAAGGCGAG+TGG | 0.681218 | 4.2:-15386765 | None:intergenic |
| ACTTTGACGAGACCAGTCCG+TGG | 0.701251 | 4.2:+15383689 | MS.gene08289:CDS |
| TGTTGCAGCACAAACCCCGG+AGG | 0.712015 | 4.2:+15386776 | MS.gene08289:CDS |
| ATTCCCTTCCTCTTTCACAG+TGG | 0.716197 | 4.2:+15383665 | MS.gene08289:CDS |
| TCTCTGTATACTGTGCTCTG+GGG | 0.735758 | 4.2:+15387804 | MS.gene08289:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAGTTTAATAGAAAAA+TGG | - | chr4.2:15387075-15387094 | None:intergenic | 10.0% |
| !! | TTCATATTAAAGAAAAAAAA+CGG | - | chr4.2:15386888-15386907 | None:intergenic | 10.0% |
| !!! | AGATTCTTATTTTTATTTTT+GGG | + | chr4.2:15387038-15387057 | MS.gene08289:intron | 10.0% |
| !!! | TAGATTCTTATTTTTATTTT+TGG | + | chr4.2:15387037-15387056 | MS.gene08289:intron | 10.0% |
| !!! | TTTATTTTAATAATTGGTTA+TGG | - | chr4.2:15386987-15387006 | None:intergenic | 10.0% |
| !! | CCAATTATTAAAATAAAGTT+TGG | + | chr4.2:15386990-15387009 | MS.gene08289:intron | 15.0% |
| !! | CTTCTTCAAAAAAAAAAAAT+AGG | + | chr4.2:15386140-15386159 | MS.gene08289:intron | 15.0% |
| !! | GATAATAACTTAAAATTAGT+TGG | + | chr4.2:15387253-15387272 | MS.gene08289:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+AGG | + | chr4.2:15386000-15386019 | MS.gene08289:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+TGG | + | chr4.2:15386000-15386019 | MS.gene08289:intron | 15.0% |
| !! | TCATCATAACAAATATTTAT+CGG | - | chr4.2:15387375-15387394 | None:intergenic | 15.0% |
| !!! | ACTAATTTTAAGTTATTATC+AGG | - | chr4.2:15387253-15387272 | None:intergenic | 15.0% |
| !!! | CCAAACTTTATTTTAATAAT+TGG | - | chr4.2:15386993-15387012 | None:intergenic | 15.0% |
| !!! | TAAATCTATATTTCTATTCT+TGG | - | chr4.2:15385611-15385630 | None:intergenic | 15.0% |
| !!! | TTTATCAATGTTTCTATTTT+TGG | - | chr4.2:15385851-15385870 | None:intergenic | 15.0% |
| !!! | TTTTACATTTTACACATTTT+TGG | + | chr4.2:15386185-15386204 | MS.gene08289:intron | 15.0% |
| !! | AAAATATGACAGTAAATCTT+TGG | - | chr4.2:15383843-15383862 | None:intergenic | 20.0% |
| !! | AACAAATAAACAAAATACAC+AGG | - | chr4.2:15384120-15384139 | None:intergenic | 20.0% |
| !! | AATATAAATGTTCAAATGAC+AGG | + | chr4.2:15385925-15385944 | MS.gene08289:intron | 20.0% |
| !! | ATCACTTTAATAAGATCATA+AGG | - | chr4.2:15387138-15387157 | None:intergenic | 20.0% |
| !! | GAAGAAAAAGATAACATTAT+AGG | - | chr4.2:15386866-15386885 | None:intergenic | 20.0% |
| !! | TTGTTAATTGCTAAATAGAA+AGG | + | chr4.2:15385339-15385358 | MS.gene08289:intron | 20.0% |
| !!! | ATATTTCTATTCTTGGAAAA+TGG | - | chr4.2:15385604-15385623 | None:intergenic | 20.0% |
| !!! | ATTTTCGACAAAATTATCAA+TGG | - | chr4.2:15386959-15386978 | None:intergenic | 20.0% |
| !!! | CTCATAAGGTTATTTAATTT+AGG | - | chr4.2:15384849-15384868 | None:intergenic | 20.0% |
| !!! | GATTAACTTGACAATTTTTA+TGG | + | chr4.2:15387012-15387031 | MS.gene08289:intron | 20.0% |
| !!! | TATTTCTATTCTTGGAAAAT+GGG | - | chr4.2:15385603-15385622 | None:intergenic | 20.0% |
| !!! | TGTATTTTGTTTATTTGTTG+AGG | + | chr4.2:15384121-15384140 | MS.gene08289:CDS | 20.0% |
| !!! | TTAATTTAGGTTTGTTGTTA+TGG | - | chr4.2:15384836-15384855 | None:intergenic | 20.0% |
| !!! | TTTTCGACAAAATTATCAAT+GGG | - | chr4.2:15386958-15386977 | None:intergenic | 20.0% |
| ! | AAAATTCAATCTGTATGACT+TGG | - | chr4.2:15385534-15385553 | None:intergenic | 25.0% |
| ! | AACTACCTTTAGATTCAAAT+TGG | - | chr4.2:15387637-15387656 | None:intergenic | 25.0% |
| ! | AATAAGATCATAAGGAAAGA+TGG | - | chr4.2:15387130-15387149 | None:intergenic | 25.0% |
| ! | AATACAAGAATCTAACAAGA+AGG | - | chr4.2:15384986-15385005 | None:intergenic | 25.0% |
| ! | AATGGGAATAAGAAAGTTTA+GGG | - | chr4.2:15386941-15386960 | None:intergenic | 25.0% |
| ! | ATACAAGAATCTAACAAGAA+GGG | - | chr4.2:15384985-15385004 | None:intergenic | 25.0% |
| ! | ATATAGAACACCCAAAAATT+TGG | - | chr4.2:15385158-15385177 | None:intergenic | 25.0% |
| ! | ATCAACAAAATGAGCAAAAA+TGG | - | chr4.2:15383761-15383780 | None:intergenic | 25.0% |
| ! | ATCAGATGATTCTTATTACT+TGG | + | chr4.2:15387093-15387112 | MS.gene08289:intron | 25.0% |
| ! | CATTCGTGAAACATTATAAT+TGG | + | chr4.2:15385703-15385722 | MS.gene08289:intron | 25.0% |
| ! | CTTTAAACATTTATTTGCAG+TGG | + | chr4.2:15384089-15384108 | MS.gene08289:CDS | 25.0% |
| ! | TAGTGCAAGAATTTAGAAAT+GGG | - | chr4.2:15384323-15384342 | None:intergenic | 25.0% |
| ! | TATAGAACACCCAAAAATTT+GGG | - | chr4.2:15385157-15385176 | None:intergenic | 25.0% |
| ! | TCAAGCATAATAAACGATTA+AGG | + | chr4.2:15387318-15387337 | MS.gene08289:intron | 25.0% |
| ! | TCCATAGTTAAATCTCATTA+AGG | + | chr4.2:15387857-15387876 | MS.gene08289:CDS | 25.0% |
| ! | TCCTATTTATACTTGAAATC+AGG | - | chr4.2:15384627-15384646 | None:intergenic | 25.0% |
| ! | TTAGTGCAAGAATTTAGAAA+TGG | - | chr4.2:15384324-15384343 | None:intergenic | 25.0% |
| ! | TTATAGACTTACTAGGAATT+TGG | + | chr4.2:15383888-15383907 | MS.gene08289:CDS | 25.0% |
| ! | TTTGAATTATAGCTCGAATA+CGG | + | chr4.2:15383807-15383826 | MS.gene08289:CDS | 25.0% |
| !! | AATACAATGGATTTCTCATT+GGG | + | chr4.2:15383989-15384008 | MS.gene08289:CDS | 25.0% |
| !! | ACCTGATTTCAAGTATAAAT+AGG | + | chr4.2:15384623-15384642 | MS.gene08289:intron | 25.0% |
| !! | ATTCTATTCTTTTGCAAGAA+GGG | - | chr4.2:15385411-15385430 | None:intergenic | 25.0% |
| !! | TATTCTATTCTTTTGCAAGA+AGG | - | chr4.2:15385412-15385431 | None:intergenic | 25.0% |
| !! | TGAAAAGTATAATTGCTTCT+TGG | - | chr4.2:15387348-15387367 | None:intergenic | 25.0% |
| !! | TGATAATTTTGTCGAAAATG+AGG | + | chr4.2:15386960-15386979 | MS.gene08289:intron | 25.0% |
| !! | TGTCATGCAATAATTTTATC+TGG | - | chr4.2:15384880-15384899 | None:intergenic | 25.0% |
| !!! | AGGAATAATGGTTTTGTTAT+TGG | + | chr4.2:15387671-15387690 | MS.gene08289:CDS | 25.0% |
| !!! | CATTACTTTTTGTTGTCAAT+AGG | + | chr4.2:15386807-15386826 | MS.gene08289:CDS | 25.0% |
| AACGTCAATTGAAAAGATCT+CGG | - | chr4.2:15386461-15386480 | None:intergenic | 30.0% | |
| AATCCCTATGTGAAATGATA+TGG | + | chr4.2:15384493-15384512 | MS.gene08289:intron | 30.0% | |
| AGTATACAGAGATCAACATA+AGG | - | chr4.2:15387796-15387815 | None:intergenic | 30.0% | |
| AGTGCAAGAATTTAGAAATG+GGG | - | chr4.2:15384322-15384341 | None:intergenic | 30.0% | |
| ATAGAACACCCAAAAATTTG+GGG | - | chr4.2:15385156-15385175 | None:intergenic | 30.0% | |
| ATCTAAAGGTAGTTTAAGTG+CGG | + | chr4.2:15387643-15387662 | MS.gene08289:CDS | 30.0% | |
| ATCTGGATACATAACTCATA+AGG | - | chr4.2:15384863-15384882 | None:intergenic | 30.0% | |
| ATGATGAGTGAGAATGTTTA+TGG | + | chr4.2:15387388-15387407 | MS.gene08289:intron | 30.0% | |
| ATTAAAGTGATCTTCACACA+AGG | + | chr4.2:15387147-15387166 | MS.gene08289:intron | 30.0% | |
| ATTGAGAAGATATATCTGGT+TGG | + | chr4.2:15387698-15387717 | MS.gene08289:CDS | 30.0% | |
| CAATGAGAAATCCATTGTAT+TGG | - | chr4.2:15383990-15384009 | None:intergenic | 30.0% | |
| CAATGGGAATAAGAAAGTTT+AGG | - | chr4.2:15386942-15386961 | None:intergenic | 30.0% | |
| CAGAACCATTATAAATGTCA+CGG | - | chr4.2:15386604-15386623 | None:intergenic | 30.0% | |
| CCAAAAAAATCAATTATGCG+AGG | - | chr4.2:15385049-15385068 | None:intergenic | 30.0% | |
| CGAAGATATGAAAGTTGTTT+GGG | + | chr4.2:15384778-15384797 | MS.gene08289:intron | 30.0% | |
| CTACCATATCATTTCACATA+GGG | - | chr4.2:15384499-15384518 | None:intergenic | 30.0% | |
| CTTGATTGAGAAGATATATC+TGG | + | chr4.2:15387694-15387713 | MS.gene08289:CDS | 30.0% | |
| GAAGATATGAAAGTTGTTTG+GGG | + | chr4.2:15384779-15384798 | MS.gene08289:intron | 30.0% | |
| GACGTCAATTGAATATATCT+CGG | - | chr4.2:15386227-15386246 | None:intergenic | 30.0% | |
| GATATGGTAGATGAATGTTA+AGG | + | chr4.2:15384509-15384528 | MS.gene08289:intron | 30.0% | |
| GTATACAGAGATCAACATAA+GGG | - | chr4.2:15387795-15387814 | None:intergenic | 30.0% | |
| TATAACATCTCGATCTTGTT+GGG | - | chr4.2:15385905-15385924 | None:intergenic | 30.0% | |
| TATACAGAGATCAACATAAG+GGG | - | chr4.2:15387794-15387813 | None:intergenic | 30.0% | |
| TCCTAATACTAATGAAAAGC+AGG | - | chr4.2:15385460-15385479 | None:intergenic | 30.0% | |
| TCGAAGATATGAAAGTTGTT+TGG | + | chr4.2:15384777-15384796 | MS.gene08289:intron | 30.0% | |
| TCGTGAAACATTATAATTGG+TGG | + | chr4.2:15385706-15385725 | MS.gene08289:intron | 30.0% | |
| TCTACCATATCATTTCACAT+AGG | - | chr4.2:15384500-15384519 | None:intergenic | 30.0% | |
| TCTTGTAGTTGTAGAGATAT+GGG | + | chr4.2:15387721-15387740 | MS.gene08289:CDS | 30.0% | |
| TTAAAGTGATCTTCACACAA+GGG | + | chr4.2:15387148-15387167 | MS.gene08289:intron | 30.0% | |
| TTATAACATCTCGATCTTGT+TGG | - | chr4.2:15385906-15385925 | None:intergenic | 30.0% | |
| TTCTATATCATGTCAGACAA+AGG | + | chr4.2:15385170-15385189 | MS.gene08289:CDS | 30.0% | |
| TTTATACTTGAAATCAGGTC+AGG | - | chr4.2:15384622-15384641 | None:intergenic | 30.0% | |
| ! | AAAGGAAAAAAAAGCACACA+AGG | + | chr4.2:15385357-15385376 | MS.gene08289:intron | 30.0% |
| ! | AAGGAAAAAAAAGCACACAA+GGG | + | chr4.2:15385358-15385377 | MS.gene08289:intron | 30.0% |
| ! | ATACCTGTGGTTTTCTTTTT+GGG | + | chr4.2:15386703-15386722 | MS.gene08289:CDS | 30.0% |
| ! | CAATACAATGGATTTCTCAT+TGG | + | chr4.2:15383988-15384007 | MS.gene08289:CDS | 30.0% |
| ! | CTGATTTGTCTCTTCTTTAT+GGG | + | chr4.2:15383863-15383882 | MS.gene08289:CDS | 30.0% |
| ! | CTTCCTGAAAAAAGTTTTAC+AGG | + | chr4.2:15384355-15384374 | MS.gene08289:intron | 30.0% |
| ! | GAAAAGGAGAACTTTTATAC+AGG | - | chr4.2:15383590-15383609 | None:intergenic | 30.0% |
| ! | GTTGATTTCACTTTCGTATT+TGG | + | chr4.2:15384017-15384036 | MS.gene08289:CDS | 30.0% |
| ! | TAGTTACTGAGCTTGATTTT+TGG | + | chr4.2:15385812-15385831 | MS.gene08289:intron | 30.0% |
| ! | TATACCTGTGGTTTTCTTTT+TGG | + | chr4.2:15386702-15386721 | MS.gene08289:CDS | 30.0% |
| ! | TCTGATTTGTCTCTTCTTTA+TGG | + | chr4.2:15383862-15383881 | MS.gene08289:CDS | 30.0% |
| ! | TGATTTGTCTCTTCTTTATG+GGG | + | chr4.2:15383864-15383883 | MS.gene08289:CDS | 30.0% |
| ! | TTCTATTCTTTTGCAAGAAG+GGG | - | chr4.2:15385410-15385429 | None:intergenic | 30.0% |
| ! | TTTAGTCGACTCTTGATTAT+GGG | + | chr4.2:15384174-15384193 | MS.gene08289:CDS | 30.0% |
| !! | AGCAACAACAGAATTTTGAT+AGG | - | chr4.2:15387518-15387537 | None:intergenic | 30.0% |
| !! | TCTTCGAACATTTATTTCTG+TGG | - | chr4.2:15384764-15384783 | None:intergenic | 30.0% |
| !!! | ACTCCTGTAAAACTTTTTTC+AGG | - | chr4.2:15384361-15384380 | None:intergenic | 30.0% |
| !!! | CCTCGCATAATTGATTTTTT+TGG | + | chr4.2:15385046-15385065 | MS.gene08289:intron | 30.0% |
| !!! | TATTTTGAGTTACCAACTCT+CGG | - | chr4.2:15385658-15385677 | None:intergenic | 30.0% |
| AAACAAGGGAGAAAATGGTA+TGG | - | chr4.2:15384404-15384423 | None:intergenic | 35.0% | |
| ACCATTATAAATGTCACGGA+TGG | - | chr4.2:15386600-15386619 | None:intergenic | 35.0% | |
| AGTTACATCATGACACTCTA+TGG | + | chr4.2:15384539-15384558 | MS.gene08289:intron | 35.0% | |
| ATAACATCTCGATCTTGTTG+GGG | - | chr4.2:15385904-15385923 | None:intergenic | 35.0% | |
| ATATCATATGCGTATACCTG+TGG | + | chr4.2:15386690-15386709 | MS.gene08289:CDS | 35.0% | |
| ATCACTTCTTAACATAAGCC+TGG | - | chr4.2:15385977-15385996 | None:intergenic | 35.0% | |
| ATCCAACGATTGTTTCCATT+TGG | + | chr4.2:15385104-15385123 | MS.gene08289:CDS | 35.0% | |
| ATCCATCTAGTAATCCTTTG+TGG | - | chr4.2:15386672-15386691 | None:intergenic | 35.0% | |
| ATGGGGTTTATAGACTTACT+AGG | + | chr4.2:15383881-15383900 | MS.gene08289:CDS | 35.0% | |
| CATGTGCATTTCCAATACAA+TGG | + | chr4.2:15383976-15383995 | MS.gene08289:CDS | 35.0% | |
| CATTGTATTGGAAATGCACA+TGG | - | chr4.2:15383978-15383997 | None:intergenic | 35.0% | |
| CGTTCGAAATATGCAAAGAA+CGG | - | chr4.2:15383730-15383749 | None:intergenic | 35.0% | |
| CTTGAAAAGACAAGGAGATA+AGG | - | chr4.2:15386631-15386650 | None:intergenic | 35.0% | |
| CTTGTAGTTGTAGAGATATG+GGG | + | chr4.2:15387722-15387741 | MS.gene08289:CDS | 35.0% | |
| GATTTCACTTTCGTATTTGG+AGG | + | chr4.2:15384020-15384039 | MS.gene08289:CDS | 35.0% | |
| GGGGAAACAACATCAAATAT+GGG | - | chr4.2:15384302-15384321 | None:intergenic | 35.0% | |
| GTCTTGTAGTTGTAGAGATA+TGG | + | chr4.2:15387720-15387739 | MS.gene08289:CDS | 35.0% | |
| GTGCAAGAATTTAGAAATGG+GGG | - | chr4.2:15384321-15384340 | None:intergenic | 35.0% | |
| GTTACATCATGACACTCTAT+GGG | + | chr4.2:15384540-15384559 | MS.gene08289:intron | 35.0% | |
| TAGTGGAAAAAGAGAATAGC+AGG | - | chr4.2:15387474-15387493 | None:intergenic | 35.0% | |
| TATAATTCAAACCCTCCTGA+AGG | - | chr4.2:15383798-15383817 | None:intergenic | 35.0% | |
| TATTCTTGGAAAATGGGATG+AGG | - | chr4.2:15385597-15385616 | None:intergenic | 35.0% | |
| TCATATTTACCTGTCCAAGA+TGG | - | chr4.2:15384245-15384264 | None:intergenic | 35.0% | |
| TCCATCCGTGACATTTATAA+TGG | + | chr4.2:15386596-15386615 | MS.gene08289:CDS | 35.0% | |
| TGAAAAGCAGGCAGTAAATA+AGG | - | chr4.2:15385448-15385467 | None:intergenic | 35.0% | |
| TGTAATGTCTGAGTTTGAGT+TGG | + | chr4.2:15387212-15387231 | MS.gene08289:intron | 35.0% | |
| ! | AAAGCAGAGGGTGTAAAAAT+TGG | - | chr4.2:15387748-15387767 | None:intergenic | 35.0% |
| ! | AAGTAATGTTTTGCATCCTC+CGG | - | chr4.2:15386795-15386814 | None:intergenic | 35.0% |
| ! | AAGTTCAGCAGTTTTCACTA+AGG | + | chr4.2:15384694-15384713 | MS.gene08289:intron | 35.0% |
| ! | AGAACTTGGTAGCTCAAAAT+GGG | + | chr4.2:15385949-15385968 | MS.gene08289:intron | 35.0% |
| ! | ATTTGTTGAGGCACTATTGT+TGG | + | chr4.2:15384133-15384152 | MS.gene08289:CDS | 35.0% |
| ! | ATTTTTACACCCTCTGCTTT+TGG | + | chr4.2:15387748-15387767 | MS.gene08289:CDS | 35.0% |
| ! | CGAGAAAGCAAAAGTTGATT+TGG | + | chr4.2:15383914-15383933 | MS.gene08289:CDS | 35.0% |
| ! | CTTATCTCCTTGTCTTTTCA+AGG | + | chr4.2:15386629-15386648 | MS.gene08289:CDS | 35.0% |
| ! | CTTTAGTCGACTCTTGATTA+TGG | + | chr4.2:15384173-15384192 | MS.gene08289:CDS | 35.0% |
| ! | GCTTTTTGTCATTCAAGTAC+AGG | + | chr4.2:15386298-15386317 | MS.gene08289:intron | 35.0% |
| ! | GTATTGATGTCTTGTGAAGA+GGG | + | chr4.2:15387170-15387189 | MS.gene08289:intron | 35.0% |
| ! | TAAACCCAAGTTTTCTGAGT+AGG | - | chr4.2:15385205-15385224 | None:intergenic | 35.0% |
| ! | TGGTCCACTATTAAAAGCAT+CGG | - | chr4.2:15383958-15383977 | None:intergenic | 35.0% |
| ! | TTTGTTGAGGCACTATTGTT+GGG | + | chr4.2:15384134-15384153 | MS.gene08289:CDS | 35.0% |
| !! | GCCTGCTTTTCATTAGTATT+AGG | + | chr4.2:15385456-15385475 | MS.gene08289:intron | 35.0% |
| !! | TGATTTGGTCGTTGGTTATT+TGG | + | chr4.2:15383929-15383948 | MS.gene08289:CDS | 35.0% |
| !! | TTCTTCACTCCATTTTGATG+TGG | + | chr4.2:15387537-15387556 | MS.gene08289:CDS | 35.0% |
| !! | TTTTTACACCCTCTGCTTTT+GGG | + | chr4.2:15387749-15387768 | MS.gene08289:CDS | 35.0% |
| AAAATAGTGCACCTTCAGGA+GGG | + | chr4.2:15383784-15383803 | MS.gene08289:CDS | 40.0% | |
| AAAGCCAGACCACATCAAAA+TGG | - | chr4.2:15387549-15387568 | None:intergenic | 40.0% | |
| AACGATTGTTTCCATTTGGC+AGG | + | chr4.2:15385108-15385127 | MS.gene08289:CDS | 40.0% | |
| AAGGTCTCTTGTGAATGTGT+GGG | + | chr4.2:15384713-15384732 | MS.gene08289:intron | 40.0% | |
| AAGTCTGTACTACGGTAAGA+CGG | - | chr4.2:15383613-15383632 | None:intergenic | 40.0% | |
| ACCCGATATCCACAAAACAA+GGG | - | chr4.2:15384418-15384437 | None:intergenic | 40.0% | |
| ACCTGTCCAAGATGGAAAAA+CGG | - | chr4.2:15384237-15384256 | None:intergenic | 40.0% | |
| ACGATTGTTTCCATTTGGCA+GGG | + | chr4.2:15385109-15385128 | MS.gene08289:CDS | 40.0% | |
| AGGCGAGTGGAATTACAAAA+TGG | - | chr4.2:15386755-15386774 | None:intergenic | 40.0% | |
| AGGTAGTAGAAAACCCACTT+GGG | + | chr4.2:15386020-15386039 | MS.gene08289:intron | 40.0% | |
| ATCTCTGTATACTGTGCTCT+GGG | + | chr4.2:15387803-15387822 | MS.gene08289:CDS | 40.0% | |
| ATGAACGTAAAACTTACCCG+AGG | - | chr4.2:15385296-15385315 | None:intergenic | 40.0% | |
| ATTCAAGTACAGGCAGAACT+TGG | + | chr4.2:15386308-15386327 | MS.gene08289:intron | 40.0% | |
| CAAAGTCGGTAGTTGACAAT+TGG | - | chr4.2:15384932-15384951 | None:intergenic | 40.0% | |
| CAATTGAACAGCAACATCTC+AGG | - | chr4.2:15385788-15385807 | None:intergenic | 40.0% | |
| CATGACACTCTATGGGAATA+AGG | + | chr4.2:15384547-15384566 | MS.gene08289:intron | 40.0% | |
| CATTAACCAGTCATCAAGCT+CGG | - | chr4.2:15386255-15386274 | None:intergenic | 40.0% | |
| CCACAAAACAAGGGAGAAAA+TGG | - | chr4.2:15384409-15384428 | None:intergenic | 40.0% | |
| CCTTCCTACTCAGAAAACTT+GGG | + | chr4.2:15385198-15385217 | MS.gene08289:CDS | 40.0% | |
| GAATTATAGCTCGAATACGG+CGG | + | chr4.2:15383810-15383829 | MS.gene08289:CDS | 40.0% | |
| GCTCACACAAAGAAAAAAGC+TGG | + | chr4.2:15387611-15387630 | MS.gene08289:CDS | 40.0% | |
| GCTGGCCAATTTGAATCTAA+AGG | + | chr4.2:15387629-15387648 | MS.gene08289:CDS | 40.0% | |
| GGATCATGTACTCTTGGATA+TGG | + | chr4.2:15387825-15387844 | MS.gene08289:CDS | 40.0% | |
| GGGGGAAACAACATCAAATA+TGG | - | chr4.2:15384303-15384322 | None:intergenic | 40.0% | |
| TAAAATAGTGCACCTTCAGG+AGG | + | chr4.2:15383783-15383802 | MS.gene08289:CDS | 40.0% | |
| TAAGGTCTCTTGTGAATGTG+TGG | + | chr4.2:15384712-15384731 | MS.gene08289:intron | 40.0% | |
| TACCCGATATCCACAAAACA+AGG | - | chr4.2:15384419-15384438 | None:intergenic | 40.0% | |
| TAGGTAGTAGAAAACCCACT+TGG | + | chr4.2:15386019-15386038 | MS.gene08289:intron | 40.0% | |
| TCACTTTCGTATTTGGAGGA+AGG | + | chr4.2:15384024-15384043 | MS.gene08289:CDS | 40.0% | |
| TCCTAAAATAGTGCACCTTC+AGG | + | chr4.2:15383780-15383799 | MS.gene08289:CDS | 40.0% | |
| TCGAAATATGCAAAGAACGG+CGG | - | chr4.2:15383727-15383746 | None:intergenic | 40.0% | |
| TGAAAACTGCTGAACTTGCA+GGG | - | chr4.2:15384691-15384710 | None:intergenic | 40.0% | |
| TGCCAAATGGAAACAATCGT+TGG | - | chr4.2:15385109-15385128 | None:intergenic | 40.0% | |
| TGTTGGGGTGGAATTGTAAA+AGG | + | chr4.2:15384150-15384169 | MS.gene08289:CDS | 40.0% | |
| TTACCGTAGTACAGACTTTG+AGG | + | chr4.2:15383615-15383634 | MS.gene08289:CDS | 40.0% | |
| TTCAAATGACAGGCAGAACT+TGG | + | chr4.2:15385935-15385954 | MS.gene08289:intron | 40.0% | |
| TTCCAAGCCTTGAAAAGACA+AGG | - | chr4.2:15386639-15386658 | None:intergenic | 40.0% | |
| TTCGTATTTGGAGGAAGGAA+GGG | + | chr4.2:15384029-15384048 | MS.gene08289:CDS | 40.0% | |
| TTTCGTATTTGGAGGAAGGA+AGG | + | chr4.2:15384028-15384047 | MS.gene08289:CDS | 40.0% | |
| TTTGTGGATATCGGGTATGT+CGG | + | chr4.2:15384422-15384441 | MS.gene08289:intron | 40.0% | |
| ! | AGTAATGTTTTGCATCCTCC+GGG | - | chr4.2:15386794-15386813 | None:intergenic | 40.0% |
| ! | ATACTGGGCCCCAAATTTTT+GGG | + | chr4.2:15385145-15385164 | MS.gene08289:CDS | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+AGG | + | chr4.2:15386104-15386123 | MS.gene08289:intron | 40.0% |
| ! | CAGAACTTGGTAGCTCAAAA+TGG | + | chr4.2:15385948-15385967 | MS.gene08289:intron | 40.0% |
| ! | GTCACCGATGCTTTTAATAG+TGG | + | chr4.2:15383951-15383970 | MS.gene08289:CDS | 40.0% |
| ! | TCAAAGTACCACTGTGAAAG+AGG | - | chr4.2:15383676-15383695 | None:intergenic | 40.0% |
| ! | TTCAGCACAGTTTTACGACA+GGG | + | chr4.2:15387568-15387587 | MS.gene08289:CDS | 40.0% |
| ! | TTGTTGAGGCACTATTGTTG+GGG | + | chr4.2:15384135-15384154 | MS.gene08289:CDS | 40.0% |
| ! | TTTCAGCACAGTTTTACGAC+AGG | + | chr4.2:15387567-15387586 | MS.gene08289:CDS | 40.0% |
| !! | CAATCTGTATGACTTGGTCA+TGG | - | chr4.2:15385528-15385547 | None:intergenic | 40.0% |
| !! | GCAAAAGTTGATTTGGTCGT+TGG | + | chr4.2:15383921-15383940 | MS.gene08289:CDS | 40.0% |
| !! | GGTATTGATGTCTTGTGAAG+AGG | + | chr4.2:15387169-15387188 | MS.gene08289:intron | 40.0% |
| !! | TCCTGAAGGTGCACTATTTT+AGG | - | chr4.2:15383784-15383803 | None:intergenic | 40.0% |
| !!! | CCATTTTCTCCCTTGTTTTG+TGG | + | chr4.2:15384406-15384425 | MS.gene08289:intron | 40.0% |
| !!! | CTCCCTTGTTTTGTGGATAT+CGG | + | chr4.2:15384413-15384432 | MS.gene08289:intron | 40.0% |
| !!! | TCCCTTGTTTTGTGGATATC+GGG | + | chr4.2:15384414-15384433 | MS.gene08289:intron | 40.0% |
| ACCCGAGGTAGAACACTAAA+AGG | - | chr4.2:15385281-15385300 | None:intergenic | 45.0% | |
| AGCTTATCACCCAAAAGCAG+AGG | - | chr4.2:15387761-15387780 | None:intergenic | 45.0% | |
| AGGTAGAACACTAAAAGGGG+AGG | - | chr4.2:15385276-15385295 | None:intergenic | 45.0% | |
| AGTACCACTGTGAAAGAGGA+AGG | - | chr4.2:15383672-15383691 | None:intergenic | 45.0% | |
| AGTAGAAAACCCACTTGGGT+TGG | + | chr4.2:15386024-15386043 | MS.gene08289:intron | 45.0% | |
| AGTCTGTACTACGGTAAGAC+GGG | - | chr4.2:15383612-15383631 | None:intergenic | 45.0% | |
| AGTGCGGATGTGAGGAATAA+TGG | + | chr4.2:15387659-15387678 | MS.gene08289:CDS | 45.0% | |
| ATCTTGCTCATCAGAGCATG+TGG | - | chr4.2:15384458-15384477 | None:intergenic | 45.0% | |
| ATGGAAAAACGGCCCAAATG+CGG | - | chr4.2:15384226-15384245 | None:intergenic | 45.0% | |
| ATTCCCTTCCTCTTTCACAG+TGG | + | chr4.2:15383665-15383684 | MS.gene08289:CDS | 45.0% | |
| CAGTGTTTGCATCCGCATTT+GGG | + | chr4.2:15384211-15384230 | MS.gene08289:CDS | 45.0% | |
| CCACCCAAAAAGAAAACCAC+AGG | - | chr4.2:15386709-15386728 | None:intergenic | 45.0% | |
| CCCGAGGTAGAACACTAAAA+GGG | - | chr4.2:15385280-15385299 | None:intergenic | 45.0% | |
| CCGAGGTAGAACACTAAAAG+GGG | - | chr4.2:15385279-15385298 | None:intergenic | 45.0% | |
| CGAAATATGCAAAGAACGGC+GGG | - | chr4.2:15383726-15383745 | None:intergenic | 45.0% | |
| CGATTGTTTCCATTTGGCAG+GGG | + | chr4.2:15385110-15385129 | MS.gene08289:CDS | 45.0% | |
| GATCTCTGTATACTGTGCTC+TGG | + | chr4.2:15387802-15387821 | MS.gene08289:CDS | 45.0% | |
| GATTGTTTCCATTTGGCAGG+GGG | + | chr4.2:15385111-15385130 | MS.gene08289:CDS | 45.0% | |
| GCACCTCAAAGTCTGTACTA+CGG | - | chr4.2:15383621-15383640 | None:intergenic | 45.0% | |
| GCCTTCCTACTCAGAAAACT+TGG | + | chr4.2:15385197-15385216 | MS.gene08289:CDS | 45.0% | |
| GCTTATCACCCAAAAGCAGA+GGG | - | chr4.2:15387760-15387779 | None:intergenic | 45.0% | |
| GGCCACAAAGGATTACTAGA+TGG | + | chr4.2:15386667-15386686 | MS.gene08289:CDS | 45.0% | |
| GTACCACTGTGAAAGAGGAA+GGG | - | chr4.2:15383671-15383690 | None:intergenic | 45.0% | |
| GTAGTTTAAGTGCGGATGTG+AGG | + | chr4.2:15387651-15387670 | MS.gene08289:CDS | 45.0% | |
| GTGAAAACTGCTGAACTTGC+AGG | - | chr4.2:15384692-15384711 | None:intergenic | 45.0% | |
| TACTACGGTAAGACGGGAAA+AGG | - | chr4.2:15383606-15383625 | None:intergenic | 45.0% | |
| TAGCGCACCTAAATTGACAC+CGG | - | chr4.2:15386114-15386133 | None:intergenic | 45.0% | |
| TCAAGGCTTGGAAGAATCCA+CGG | + | chr4.2:15386646-15386665 | MS.gene08289:CDS | 45.0% | |
| TCTCTGTATACTGTGCTCTG+GGG | + | chr4.2:15387804-15387823 | MS.gene08289:CDS | 45.0% | |
| ! | AGTCGACTCTTGATTATGGG+AGG | + | chr4.2:15384177-15384196 | MS.gene08289:CDS | 45.0% |
| ! | CATACTGGGCCCCAAATTTT+TGG | + | chr4.2:15385144-15385163 | MS.gene08289:CDS | 45.0% |
| ! | CCCAAGTTTTCTGAGTAGGA+AGG | - | chr4.2:15385201-15385220 | None:intergenic | 45.0% |
| ! | CCCCTTTTAGTGTTCTACCT+CGG | + | chr4.2:15385276-15385295 | MS.gene08289:CDS | 45.0% |
| ! | CCCTTTTAGTGTTCTACCTC+GGG | + | chr4.2:15385277-15385296 | MS.gene08289:CDS | 45.0% |
| ! | GAGGAAGGAAGGGATTTGTT+AGG | + | chr4.2:15384039-15384058 | MS.gene08289:CDS | 45.0% |
| ! | GTAATGTTTTGCATCCTCCG+GGG | - | chr4.2:15386793-15386812 | None:intergenic | 45.0% |
| ! | TCGCAACTGAGCTTGATAAC+TGG | + | chr4.2:15386480-15386499 | MS.gene08289:intron | 45.0% |
| !! | AACCACCAGAGAGTCGTTTT+CGG | - | chr4.2:15383553-15383572 | None:intergenic | 45.0% |
| !! | CACTCCATTTTGATGTGGTC+TGG | + | chr4.2:15387542-15387561 | MS.gene08289:CDS | 45.0% |
| !! | CCTGTGGTTTTCTTTTTGGG+TGG | + | chr4.2:15386706-15386725 | MS.gene08289:CDS | 45.0% |
| !! | CTCCTTGTCTTTTCAAGGCT+TGG | + | chr4.2:15386634-15386653 | MS.gene08289:CDS | 45.0% |
| !! | GAAGGAAGGGATTTGTTAGG+TGG | + | chr4.2:15384042-15384061 | MS.gene08289:CDS | 45.0% |
| !!! | TTTGGGCCGTTTTTCCATCT+TGG | + | chr4.2:15384228-15384247 | MS.gene08289:CDS | 45.0% |
| ATCTCGGAAGTCACAACAGC+TGG | - | chr4.2:15386445-15386464 | None:intergenic | 50.0% | |
| ATCTCGGAAGTTGCAACAGC+TGG | - | chr4.2:15386211-15386230 | None:intergenic | 50.0% | |
| CAGCAGCTTCATTCACTGCA+GGG | + | chr4.2:15385237-15385256 | MS.gene08289:CDS | 50.0% | |
| CGCACATGAGCATGCAAAGT+CGG | - | chr4.2:15384946-15384965 | None:intergenic | 50.0% | |
| CTAGTAATCCTTTGTGGCCG+TGG | - | chr4.2:15386666-15386685 | None:intergenic | 50.0% | |
| CTTTGTTGCAGCACAAACCC+CGG | + | chr4.2:15386773-15386792 | MS.gene08289:CDS | 50.0% | |
| GCAGTGTTTGCATCCGCATT+TGG | + | chr4.2:15384210-15384229 | MS.gene08289:CDS | 50.0% | |
| GGTAGCTCAAAATGAGCACC+AGG | + | chr4.2:15386329-15386348 | MS.gene08289:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | + | chr4.2:15386092-15386111 | MS.gene08289:intron | 50.0% | |
| GTGTCAATGCCAGCCAATTG+CGG | - | chr4.2:15383645-15383664 | None:intergenic | 50.0% | |
| TGAATGAAGCTGCTGGTGTC+TGG | - | chr4.2:15385232-15385251 | None:intergenic | 50.0% | |
| TTGCTCATCAGAGCATGTGG+AGG | - | chr4.2:15384455-15384474 | None:intergenic | 50.0% | |
| ! | AATTTGGGGCCCAGTATGCA+TGG | - | chr4.2:15385142-15385161 | None:intergenic | 50.0% |
| ! | CAACATCTCAGGCGTTGCAA+TGG | - | chr4.2:15385777-15385796 | None:intergenic | 50.0% |
| ! | CTCTGGGGATCATGTACTCT+TGG | + | chr4.2:15387819-15387838 | MS.gene08289:CDS | 50.0% |
| ! | GTAATCTAGAGTCCACGGAC+TGG | - | chr4.2:15383704-15383723 | None:intergenic | 50.0% |
| ! | TCATTCACTGCAGGGCTAGT+AGG | + | chr4.2:15385245-15385264 | MS.gene08289:CDS | 50.0% |
| ! | TTGAGGCACTATTGTTGGGG+TGG | + | chr4.2:15384138-15384157 | MS.gene08289:CDS | 50.0% |
| !! | ACCACCAGAGAGTCGTTTTC+GGG | - | chr4.2:15383552-15383571 | None:intergenic | 50.0% |
| !! | ACTTTGAGGTGCACCGCAAT+TGG | + | chr4.2:15383629-15383648 | MS.gene08289:CDS | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | + | chr4.2:15386044-15386063 | MS.gene08289:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | + | chr4.2:15386043-15386062 | MS.gene08289:intron | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr4.2:15386038-15386057 | MS.gene08289:intron | 50.0% |
| !!! | GCCGTTTTTCCATCTTGGAC+AGG | + | chr4.2:15384233-15384252 | MS.gene08289:CDS | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr4.2:15386036-15386055 | None:intergenic | 55.0% | |
| ACTTTGACGAGACCAGTCCG+TGG | + | chr4.2:15383689-15383708 | MS.gene08289:CDS | 55.0% | |
| CCAGCAGCTTCATTCACTGC+AGG | + | chr4.2:15385236-15385255 | MS.gene08289:CDS | 55.0% | |
| CCTGCAGTGAATGAAGCTGC+TGG | - | chr4.2:15385239-15385258 | None:intergenic | 55.0% | |
| CGGGGTTTGTGCTGCAACAA+AGG | - | chr4.2:15386775-15386794 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | - | chr4.2:15386088-15386107 | None:intergenic | 55.0% | |
| GGAAGAATCCACGGCCACAA+AGG | + | chr4.2:15386655-15386674 | MS.gene08289:CDS | 55.0% | |
| GGGGCTTTGCCATGCATACT+GGG | + | chr4.2:15385130-15385149 | MS.gene08289:CDS | 55.0% | |
| GGTAGCTCAAAATGGGCACC+AGG | + | chr4.2:15385956-15385975 | MS.gene08289:intron | 55.0% | |
| GGTCCCAAGCCAATACCACT+AGG | - | chr4.2:15386050-15386069 | None:intergenic | 55.0% | |
| GTAGCCCGAAAACGACTCTC+TGG | + | chr4.2:15383545-15383564 | MS.gene08289:CDS | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr4.2:15386037-15386056 | None:intergenic | 55.0% | |
| TGGGTGGCATGTGCATGAGA+AGG | + | chr4.2:15386722-15386741 | MS.gene08289:CDS | 55.0% | |
| TGTGCTGCAACAAAGGCGAG+TGG | - | chr4.2:15386768-15386787 | None:intergenic | 55.0% | |
| ! | CTGCAACCGAGCTTGATGAC+TGG | + | chr4.2:15386246-15386265 | MS.gene08289:intron | 55.0% |
| ! | GGCGGGTAATCTAGAGTCCA+CGG | - | chr4.2:15383709-15383728 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | chr4.2:15386050-15386069 | MS.gene08289:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr4.2:15386051-15386070 | MS.gene08289:intron | 55.0% |
| ACCAACTCTCGGCTGCGATG+TGG | - | chr4.2:15385647-15385666 | None:intergenic | 60.0% | |
| GCCCGAAAACGACTCTCTGG+TGG | + | chr4.2:15383548-15383567 | MS.gene08289:CDS | 60.0% | |
| GGGGGCTTTGCCATGCATAC+TGG | + | chr4.2:15385129-15385148 | MS.gene08289:CDS | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr4.2:15386085-15386104 | None:intergenic | 60.0% | |
| TGAGGTGCACCGCAATTGGC+TGG | + | chr4.2:15383633-15383652 | MS.gene08289:CDS | 60.0% | |
| TGGCAAAGCCCCCTGCCAAA+TGG | - | chr4.2:15385122-15385141 | None:intergenic | 60.0% | |
| TGTTGCAGCACAAACCCCGG+AGG | + | chr4.2:15386776-15386795 | MS.gene08289:CDS | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr4.2:15386032-15386051 | MS.gene08289:intron | 60.0% |
| GCCACATCGCAGCCGAGAGT+TGG | + | chr4.2:15385643-15385662 | MS.gene08289:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr4.2:15386077-15386096 | MS.gene08289:intron | 65.0% | |
| ! | TCGAGGAGGAGCACACTCCC+AGG | - | chr4.2:15386071-15386090 | None:intergenic | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr4.2:15386070-15386089 | MS.gene08289:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 15383502 | 15387877 | 15383502 | ID=MS.gene08289 |
| chr4.2 | mRNA | 15383502 | 15387877 | 15383502 | ID=MS.gene08289.t1;Parent=MS.gene08289 |
| chr4.2 | exon | 15383502 | 15384254 | 15383502 | ID=MS.gene08289.t1.exon1;Parent=MS.gene08289.t1 |
| chr4.2 | CDS | 15383502 | 15384254 | 15383502 | ID=cds.MS.gene08289.t1;Parent=MS.gene08289.t1 |
| chr4.2 | exon | 15385092 | 15385298 | 15385092 | ID=MS.gene08289.t1.exon2;Parent=MS.gene08289.t1 |
| chr4.2 | CDS | 15385092 | 15385298 | 15385092 | ID=cds.MS.gene08289.t1;Parent=MS.gene08289.t1 |
| chr4.2 | exon | 15386591 | 15386828 | 15386591 | ID=MS.gene08289.t1.exon3;Parent=MS.gene08289.t1 |
| chr4.2 | CDS | 15386591 | 15386828 | 15386591 | ID=cds.MS.gene08289.t1;Parent=MS.gene08289.t1 |
| chr4.2 | exon | 15387468 | 15387877 | 15387468 | ID=MS.gene08289.t1.exon4;Parent=MS.gene08289.t1 |
| chr4.2 | CDS | 15387468 | 15387877 | 15387468 | ID=cds.MS.gene08289.t1;Parent=MS.gene08289.t1 |
| Gene Sequence |
| Protein sequence |
