Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08679.t1 | XP_013455985.2 | 95.7 | 692 | 30 | 0 | 1 | 692 | 4 | 695 | 0.00E+00 | 1277.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08679.t1 | A0A396I4Z0 | 95.7 | 692 | 30 | 0 | 1 | 692 | 4 | 695 | 0.0e+00 | 1277.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049302 | MS.gene08679 | 0.856742 | 2.62E-62 | -1.69E-46 |
MS.gene049418 | MS.gene08679 | 0.819146 | 1.35E-52 | -1.69E-46 |
MS.gene050649 | MS.gene08679 | 0.832694 | 8.17E-56 | -1.69E-46 |
MS.gene051067 | MS.gene08679 | 0.800123 | 1.67E-48 | -1.69E-46 |
MS.gene058206 | MS.gene08679 | 0.801627 | 8.24E-49 | -1.69E-46 |
MS.gene058909 | MS.gene08679 | 0.803962 | 2.71E-49 | -1.69E-46 |
MS.gene058912 | MS.gene08679 | 0.803528 | 3.34E-49 | -1.69E-46 |
MS.gene060317 | MS.gene08679 | 0.824417 | 8.16E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08679.t1 | MTR_4g058015 | 97.974 | 691 | 14 | 0 | 2 | 692 | 1 | 691 | 0.0 | 1400 |
MS.gene08679.t1 | MTR_5g079910 | 43.099 | 355 | 187 | 7 | 341 | 692 | 169 | 511 | 1.58e-87 | 284 |
MS.gene08679.t1 | MTR_3g101340 | 30.272 | 588 | 332 | 16 | 109 | 691 | 24 | 538 | 1.31e-67 | 231 |
MS.gene08679.t1 | MTR_3g101340 | 30.546 | 586 | 334 | 15 | 109 | 691 | 49 | 564 | 1.52e-67 | 232 |
MS.gene08679.t1 | MTR_8g079840 | 33.782 | 595 | 340 | 17 | 118 | 690 | 33 | 595 | 2.42e-67 | 232 |
MS.gene08679.t1 | MTR_3g101340 | 29.933 | 598 | 329 | 16 | 109 | 691 | 49 | 571 | 4.82e-67 | 231 |
MS.gene08679.t1 | MTR_5g017790 | 37.609 | 343 | 164 | 9 | 351 | 690 | 237 | 532 | 4.78e-65 | 224 |
MS.gene08679.t1 | MTR_5g017790 | 37.609 | 343 | 164 | 9 | 351 | 690 | 249 | 544 | 5.13e-65 | 224 |
MS.gene08679.t1 | MTR_1g021040 | 31.826 | 597 | 326 | 18 | 113 | 691 | 13 | 546 | 4.35e-64 | 222 |
MS.gene08679.t1 | MTR_8g079840 | 31.463 | 499 | 291 | 15 | 118 | 594 | 33 | 502 | 4.54e-39 | 151 |
MS.gene08679.t1 | MTR_8g078760 | 30.857 | 350 | 203 | 9 | 352 | 690 | 299 | 620 | 5.55e-39 | 153 |
MS.gene08679.t1 | MTR_5g012790 | 28.926 | 363 | 210 | 11 | 339 | 691 | 260 | 584 | 6.40e-36 | 144 |
MS.gene08679.t1 | MTR_5g018820 | 30.899 | 356 | 206 | 9 | 350 | 691 | 290 | 619 | 1.12e-35 | 143 |
MS.gene08679.t1 | MTR_5g079910 | 41.341 | 179 | 100 | 3 | 351 | 527 | 178 | 353 | 9.46e-35 | 136 |
MS.gene08679.t1 | MTR_5g017790 | 36.316 | 190 | 83 | 5 | 351 | 540 | 249 | 400 | 1.16e-31 | 128 |
MS.gene08679.t1 | MTR_4g068920 | 27.171 | 357 | 223 | 11 | 344 | 691 | 301 | 629 | 1.80e-27 | 118 |
MS.gene08679.t1 | MTR_8g078760 | 31.746 | 252 | 141 | 7 | 352 | 592 | 299 | 530 | 1.03e-25 | 112 |
MS.gene08679.t1 | MTR_3g073590 | 29.648 | 199 | 127 | 6 | 463 | 656 | 589 | 779 | 7.94e-13 | 72.4 |
MS.gene08679.t1 | MTR_8g033290 | 29.605 | 152 | 98 | 2 | 462 | 611 | 408 | 552 | 2.68e-12 | 70.5 |
MS.gene08679.t1 | MTR_1g035690 | 27.273 | 198 | 121 | 6 | 462 | 650 | 386 | 569 | 1.29e-11 | 68.2 |
MS.gene08679.t1 | MTR_5g061340 | 27.485 | 171 | 117 | 3 | 461 | 630 | 760 | 924 | 1.89e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08679.t1 | AT5G60720 | 51.593 | 659 | 228 | 15 | 102 | 692 | 56 | 691 | 0.0 | 582 |
MS.gene08679.t1 | AT2G39690 | 42.857 | 350 | 179 | 6 | 344 | 692 | 89 | 418 | 4.31e-86 | 277 |
MS.gene08679.t1 | AT2G39690 | 42.857 | 350 | 179 | 6 | 344 | 692 | 170 | 499 | 2.87e-85 | 277 |
MS.gene08679.t1 | AT2G39690 | 42.857 | 350 | 179 | 6 | 344 | 692 | 196 | 525 | 3.20e-85 | 278 |
MS.gene08679.t1 | AT2G39690 | 42.286 | 350 | 180 | 6 | 344 | 692 | 196 | 524 | 4.11e-83 | 273 |
MS.gene08679.t1 | AT2G39690 | 42.286 | 350 | 180 | 6 | 344 | 692 | 170 | 498 | 4.53e-83 | 271 |
MS.gene08679.t1 | AT5G42690 | 39.942 | 343 | 168 | 9 | 350 | 692 | 184 | 488 | 1.26e-66 | 228 |
MS.gene08679.t1 | AT5G42690 | 39.942 | 343 | 168 | 9 | 350 | 692 | 209 | 513 | 2.95e-66 | 227 |
MS.gene08679.t1 | AT5G42690 | 39.942 | 343 | 168 | 9 | 350 | 692 | 236 | 540 | 5.47e-66 | 227 |
MS.gene08679.t1 | AT5G42690 | 39.942 | 343 | 168 | 9 | 350 | 692 | 236 | 540 | 5.47e-66 | 227 |
MS.gene08679.t1 | AT5G42690 | 39.942 | 343 | 168 | 9 | 350 | 692 | 235 | 539 | 5.58e-66 | 227 |
MS.gene08679.t1 | AT3G12540 | 38.395 | 349 | 184 | 10 | 351 | 692 | 181 | 505 | 2.43e-63 | 219 |
MS.gene08679.t1 | AT3G12540 | 38.395 | 349 | 184 | 10 | 351 | 692 | 248 | 572 | 3.53e-63 | 220 |
MS.gene08679.t1 | AT4G37080 | 31.648 | 613 | 321 | 16 | 118 | 690 | 41 | 595 | 7.79e-62 | 217 |
MS.gene08679.t1 | AT4G37080 | 31.648 | 613 | 321 | 16 | 118 | 690 | 54 | 608 | 9.49e-62 | 217 |
MS.gene08679.t1 | AT4G37080 | 31.648 | 613 | 321 | 16 | 118 | 690 | 54 | 608 | 9.49e-62 | 217 |
MS.gene08679.t1 | AT2G39690 | 43.145 | 248 | 121 | 5 | 344 | 590 | 196 | 424 | 2.57e-54 | 192 |
MS.gene08679.t1 | AT2G39690 | 42.339 | 248 | 122 | 5 | 344 | 590 | 196 | 423 | 2.28e-52 | 187 |
MS.gene08679.t1 | AT5G47380 | 28.977 | 352 | 197 | 7 | 351 | 691 | 222 | 531 | 1.01e-40 | 157 |
MS.gene08679.t1 | AT5G47380 | 28.409 | 352 | 199 | 8 | 351 | 691 | 278 | 587 | 1.58e-40 | 157 |
MS.gene08679.t1 | AT2G39690 | 42.424 | 198 | 99 | 4 | 344 | 540 | 170 | 353 | 1.59e-40 | 152 |
MS.gene08679.t1 | AT5G47380 | 28.409 | 352 | 199 | 8 | 351 | 691 | 278 | 587 | 2.77e-40 | 157 |
MS.gene08679.t1 | AT4G37080 | 30.019 | 513 | 264 | 14 | 118 | 590 | 54 | 511 | 8.45e-36 | 142 |
MS.gene08679.t1 | AT1G16750 | 30.788 | 419 | 226 | 15 | 319 | 690 | 126 | 527 | 4.91e-35 | 140 |
MS.gene08679.t1 | AT5G66600 | 30.857 | 350 | 209 | 10 | 351 | 690 | 228 | 554 | 1.36e-33 | 136 |
MS.gene08679.t1 | AT5G66600 | 31.143 | 350 | 208 | 11 | 351 | 690 | 282 | 608 | 1.46e-33 | 137 |
MS.gene08679.t1 | AT5G66600 | 31.143 | 350 | 208 | 11 | 351 | 690 | 282 | 608 | 1.46e-33 | 137 |
MS.gene08679.t1 | AT5G66600 | 31.143 | 350 | 208 | 11 | 351 | 690 | 282 | 608 | 1.46e-33 | 137 |
MS.gene08679.t1 | AT5G66600 | 31.143 | 350 | 208 | 11 | 351 | 690 | 282 | 608 | 1.46e-33 | 137 |
MS.gene08679.t1 | AT5G66600 | 31.143 | 350 | 208 | 11 | 351 | 690 | 282 | 608 | 1.46e-33 | 137 |
MS.gene08679.t1 | AT5G66600 | 30.857 | 350 | 209 | 10 | 351 | 690 | 262 | 588 | 1.58e-33 | 136 |
MS.gene08679.t1 | AT2G23700 | 31.224 | 237 | 142 | 4 | 463 | 691 | 479 | 702 | 3.08e-33 | 136 |
MS.gene08679.t1 | AT1G76620 | 27.401 | 354 | 215 | 10 | 351 | 691 | 193 | 517 | 2.52e-28 | 120 |
MS.gene08679.t1 | AT1G43020 | 33.505 | 194 | 122 | 4 | 461 | 650 | 211 | 401 | 9.23e-25 | 108 |
MS.gene08679.t1 | AT3G18900 | 28.736 | 261 | 168 | 6 | 436 | 690 | 282 | 530 | 4.96e-24 | 107 |
MS.gene08679.t1 | AT3G18900 | 28.736 | 261 | 168 | 6 | 436 | 690 | 277 | 525 | 5.96e-24 | 106 |
MS.gene08679.t1 | AT3G18900 | 28.352 | 261 | 169 | 5 | 436 | 690 | 201 | 449 | 7.86e-24 | 105 |
MS.gene08679.t1 | AT3G18900 | 28.352 | 261 | 169 | 5 | 436 | 690 | 201 | 449 | 7.86e-24 | 105 |
MS.gene08679.t1 | AT5G47380 | 28.685 | 251 | 128 | 7 | 351 | 590 | 278 | 488 | 1.25e-22 | 102 |
MS.gene08679.t1 | AT5G47380 | 28.906 | 256 | 130 | 8 | 351 | 595 | 278 | 492 | 1.88e-22 | 102 |
MS.gene08679.t1 | AT5G66600 | 31.600 | 250 | 144 | 7 | 351 | 590 | 282 | 514 | 4.11e-22 | 101 |
MS.gene08679.t1 | AT5G66600 | 31.600 | 250 | 144 | 7 | 351 | 590 | 282 | 514 | 4.11e-22 | 101 |
MS.gene08679.t1 | AT5G66600 | 31.600 | 250 | 144 | 7 | 351 | 590 | 282 | 514 | 4.11e-22 | 101 |
MS.gene08679.t1 | AT5G66600 | 31.600 | 250 | 144 | 7 | 351 | 590 | 282 | 514 | 4.11e-22 | 101 |
MS.gene08679.t1 | AT1G21060 | 24.355 | 349 | 211 | 8 | 351 | 690 | 199 | 503 | 5.08e-22 | 100 |
MS.gene08679.t1 | AT1G21060 | 24.355 | 349 | 211 | 8 | 351 | 690 | 187 | 491 | 5.31e-22 | 100 |
MS.gene08679.t1 | AT1G16750 | 33.333 | 261 | 125 | 11 | 319 | 540 | 126 | 376 | 3.14e-20 | 94.0 |
MS.gene08679.t1 | AT5G66600 | 33.508 | 191 | 115 | 5 | 351 | 539 | 228 | 408 | 2.93e-18 | 88.6 |
MS.gene08679.t1 | AT5G66600 | 34.555 | 191 | 113 | 5 | 351 | 539 | 282 | 462 | 3.04e-18 | 89.0 |
MS.gene08679.t1 | AT5G66600 | 34.555 | 191 | 113 | 5 | 351 | 539 | 282 | 462 | 3.04e-18 | 89.0 |
MS.gene08679.t1 | AT5G66600 | 34.555 | 191 | 113 | 5 | 351 | 539 | 282 | 462 | 3.04e-18 | 89.0 |
MS.gene08679.t1 | AT1G76620 | 28.854 | 253 | 145 | 8 | 351 | 590 | 193 | 423 | 1.56e-16 | 83.2 |
MS.gene08679.t1 | AT3G18900 | 32.298 | 161 | 97 | 4 | 436 | 590 | 282 | 436 | 3.33e-16 | 82.4 |
MS.gene08679.t1 | AT1G43020 | 36.364 | 132 | 77 | 4 | 461 | 588 | 211 | 339 | 1.58e-15 | 79.3 |
MS.gene08679.t1 | AT3G18900 | 36.449 | 107 | 66 | 1 | 436 | 542 | 282 | 386 | 2.71e-14 | 75.9 |
MS.gene08679.t1 | AT3G11920 | 31.098 | 164 | 102 | 4 | 462 | 621 | 413 | 569 | 1.40e-13 | 74.7 |
MS.gene08679.t1 | AT4G08550 | 29.412 | 153 | 102 | 2 | 463 | 615 | 478 | 624 | 7.37e-12 | 69.3 |
MS.gene08679.t1 | AT4G08550 | 29.412 | 153 | 102 | 2 | 463 | 615 | 424 | 570 | 9.09e-12 | 68.9 |
Find 137 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAACATAAGACTTGGTTTC+TGG | 0.166945 | 4.4:+45240576 | None:intergenic |
CAGTTTGAAGAGTGCTAATT+TGG | 0.181753 | 4.4:+45241639 | None:intergenic |
ATCAACAGAAATTAGCATTT+TGG | 0.183836 | 4.4:-45240086 | MS.gene08679:CDS |
ACACATAACTTCTCTTTCTT+TGG | 0.210882 | 4.4:-45243696 | MS.gene08679:CDS |
TCCACCTCAGAAAAGTTAAT+TGG | 0.228419 | 4.4:-45239891 | MS.gene08679:CDS |
TCAGTTGTACGTGAACTTTA+TGG | 0.245870 | 4.4:-45239111 | MS.gene08679:CDS |
TACCTTAGAAGGAAGAAAAT+TGG | 0.249973 | 4.4:+45242217 | None:intergenic |
CAAAATCAAGCATGTTTCTT+AGG | 0.251643 | 4.4:+45237471 | None:intergenic |
ACTTGTTTGGTTGCCACTTT+AGG | 0.257192 | 4.4:+45240750 | None:intergenic |
TATGTTCACTTCAAGTTCTA+TGG | 0.258096 | 4.4:-45240465 | MS.gene08679:CDS |
AATCAATGGTTGAATGCTTT+AGG | 0.263766 | 4.4:-45237382 | MS.gene08679:CDS |
AATTCTAAGCGTTTCATGTT+TGG | 0.267227 | 4.4:-45243585 | MS.gene08679:CDS |
CTTTAAGCTCAAGAAGCTTC+CGG | 0.292568 | 4.4:-45240616 | MS.gene08679:CDS |
ATTCTAAGCGTTTCATGTTT+GGG | 0.299941 | 4.4:-45243584 | MS.gene08679:CDS |
ATCAATGGTTGAATGCTTTA+GGG | 0.312421 | 4.4:-45237381 | MS.gene08679:CDS |
GGTTCATGAAATATTGGATA+TGG | 0.316220 | 4.4:-45242276 | MS.gene08679:CDS |
TTATAGGGATTCATTCAATA+TGG | 0.316382 | 4.4:-45239921 | MS.gene08679:intron |
TATTGGATATGGTAAATAAT+AGG | 0.316666 | 4.4:-45242265 | MS.gene08679:CDS |
CAGTTGTACGTGAACTTTAT+GGG | 0.329243 | 4.4:-45239110 | MS.gene08679:CDS |
AGAAAAGGTTCATGAAATAT+TGG | 0.331517 | 4.4:-45242282 | MS.gene08679:CDS |
AAGAAGCTTCCGGGTCGATC+TGG | 0.336608 | 4.4:-45240606 | MS.gene08679:CDS |
CTAATTTCTGTTGATTTGTA+AGG | 0.339731 | 4.4:+45240094 | None:intergenic |
TGCAACCAGTTACCTACTTC+AGG | 0.348159 | 4.4:-45237416 | MS.gene08679:CDS |
CTATCTTCAAGCTTCAATTC+TGG | 0.350213 | 4.4:-45237531 | MS.gene08679:CDS |
GAACATTGTATTACCTTAGA+AGG | 0.364713 | 4.4:+45242206 | None:intergenic |
TTTAAGCTCAAGAAGCTTCC+GGG | 0.364939 | 4.4:-45240615 | MS.gene08679:CDS |
AACATCAAGAGCAATGGAAT+TGG | 0.365837 | 4.4:-45240675 | MS.gene08679:CDS |
CTGCTTCTTTGAACAGAACT+AGG | 0.368104 | 4.4:+45241506 | None:intergenic |
TGAAAATTTGTTGATGAAGT+TGG | 0.375911 | 4.4:+45243754 | None:intergenic |
TACCTACTTCAGGGACTCTA+AGG | 0.378077 | 4.4:-45237406 | MS.gene08679:CDS |
TTCCATTACTAAGGAAGTTA+AGG | 0.379857 | 4.4:-45240412 | MS.gene08679:intron |
TATTGGTCCTTACAAGAATC+TGG | 0.381010 | 4.4:-45240489 | MS.gene08679:CDS |
CAAATTAGCACTCTTCAAAC+TGG | 0.386190 | 4.4:-45241638 | MS.gene08679:CDS |
ATGCTTTCAGATAACTTGTT+TGG | 0.391339 | 4.4:+45240737 | None:intergenic |
CTTCTTCATCTTCATAATGT+TGG | 0.403192 | 4.4:+45243646 | None:intergenic |
ACTTTATGGGCTTGAATTTG+TGG | 0.408759 | 4.4:-45239097 | MS.gene08679:CDS |
ATATTGAAATTCATAGTCAT+AGG | 0.413947 | 4.4:+45237313 | None:intergenic |
ACCTTAGAAGGAAGAAAATT+GGG | 0.416248 | 4.4:+45242218 | None:intergenic |
GAATGCAATGATCTTGAAAC+AGG | 0.417102 | 4.4:+45240641 | None:intergenic |
GAGTCCATTCCTAGGGATAT+TGG | 0.417480 | 4.4:-45240506 | MS.gene08679:CDS |
CAACATAAGACTTGGTTTCT+GGG | 0.418995 | 4.4:+45240577 | None:intergenic |
TTTCATAAGTAAAGCTATCA+AGG | 0.422572 | 4.4:-45241438 | MS.gene08679:CDS |
CAGAGAGCAAATGTGACATT+TGG | 0.422686 | 4.4:+45239072 | None:intergenic |
TACCTTAACTTCCTTAGTAA+TGG | 0.431693 | 4.4:+45240410 | None:intergenic |
GAAGGGCTTGATATAAACTT+TGG | 0.435869 | 4.4:+45240440 | None:intergenic |
ATGTTTCTTAGGAGAAGTTC+TGG | 0.438412 | 4.4:+45237482 | None:intergenic |
TCTGAATCAAAGATACCATA+TGG | 0.439160 | 4.4:+45240530 | None:intergenic |
GAGTCCCTGAAGTAGGTAAC+TGG | 0.441166 | 4.4:+45237411 | None:intergenic |
AGTTTGAAGAGTGCTAATTT+GGG | 0.447313 | 4.4:+45241640 | None:intergenic |
CACTATGCTTCAAAGGTTGT+TGG | 0.447968 | 4.4:-45242312 | MS.gene08679:CDS |
CTTCGTCTATTCCATTACTA+AGG | 0.456267 | 4.4:-45240421 | MS.gene08679:CDS |
TATGTTGCCTCCTATGTTGA+GGG | 0.458305 | 4.4:+45239325 | None:intergenic |
GTTGTTGGACCAAGAAGAAA+AGG | 0.462739 | 4.4:-45242297 | MS.gene08679:CDS |
TTATGTTGCCTCCTATGTTG+AGG | 0.466014 | 4.4:+45239324 | None:intergenic |
TTTGTTGTGGTTGTGAGTGC+TGG | 0.467108 | 4.4:+45243805 | None:intergenic |
TTTCATGTTTGGGTCTTCCA+TGG | 0.467537 | 4.4:-45243574 | MS.gene08679:CDS |
ATTCAGAAGAGTCCATTCCT+AGG | 0.471954 | 4.4:-45240514 | MS.gene08679:CDS |
CTTCAGACAGTTGATTTGAA+AGG | 0.476543 | 4.4:-45240117 | MS.gene08679:CDS |
CATGCTTTAGGCACAAAGGA+AGG | 0.478093 | 4.4:-45239154 | MS.gene08679:intron |
AGTTATGTGTTGAAGTTGAG+AGG | 0.478235 | 4.4:+45243709 | None:intergenic |
CATTGCTCATCAAATTCCCT+TGG | 0.485674 | 4.4:+45241564 | None:intergenic |
CAGAAGAGAATGACCTAAAG+TGG | 0.486770 | 4.4:-45240763 | MS.gene08679:CDS |
AGAAGCTTCCGGGTCGATCT+GGG | 0.491267 | 4.4:-45240605 | MS.gene08679:CDS |
AATTTCATGAAAGAGTTACT+AGG | 0.496129 | 4.4:-45241319 | MS.gene08679:CDS |
TTCTGGCTACTAGCAACAAA+AGG | 0.498821 | 4.4:-45237514 | MS.gene08679:CDS |
TGCTTTAGGCACAAAGGAAG+GGG | 0.499304 | 4.4:-45239152 | MS.gene08679:intron |
ATAGATATAGCTGAACCGTT+TGG | 0.512371 | 4.4:+45242242 | None:intergenic |
TTGTGGTTGTGAGTGCTGGT+AGG | 0.515279 | 4.4:+45243809 | None:intergenic |
TCCTTGTGCAACATAAGACT+TGG | 0.518516 | 4.4:+45240569 | None:intergenic |
GTTGAATGCTTTAGGGGTCA+TGG | 0.519652 | 4.4:-45237374 | MS.gene08679:CDS |
ACCTTAGGTGATGGATGGCG+CGG | 0.520139 | 4.4:+45241257 | None:intergenic |
GCTACTAGCAACAAAAGGAT+AGG | 0.522154 | 4.4:-45237509 | MS.gene08679:CDS |
TATTGATTCACTAGTGGAAT+GGG | 0.525242 | 4.4:-45237441 | MS.gene08679:CDS |
ATGGTAAATAATAGGCCAAA+CGG | 0.530946 | 4.4:-45242257 | MS.gene08679:CDS |
AACATAACCAGATTCTTGTA+AGG | 0.532047 | 4.4:+45240482 | None:intergenic |
ATGCTTTAGGCACAAAGGAA+GGG | 0.533191 | 4.4:-45239153 | MS.gene08679:intron |
TTATGTTGCACAAGGAATCA+AGG | 0.533454 | 4.4:-45240562 | MS.gene08679:CDS |
TCAAGGCAGCAAGATCCATA+TGG | 0.535834 | 4.4:-45240545 | MS.gene08679:CDS |
AGATGCTTCTAATATGAAAG+AGG | 0.540918 | 4.4:-45239261 | MS.gene08679:intron |
AACAGGTCACTATGCTTCAA+AGG | 0.544746 | 4.4:-45242319 | MS.gene08679:intron |
GTCACATTTGCTCTCTGTAG+TGG | 0.549863 | 4.4:-45239066 | MS.gene08679:CDS |
TTCCTTAGAGTCCCTGAAGT+AGG | 0.552540 | 4.4:+45237404 | None:intergenic |
CGCGGGTCACGCATAGGCGA+GGG | 0.553869 | 4.4:+45241275 | None:intergenic |
GTTATGTGTTGAAGTTGAGA+GGG | 0.554364 | 4.4:+45243710 | None:intergenic |
GCAACCAGTTACCTACTTCA+GGG | 0.554937 | 4.4:-45237415 | MS.gene08679:CDS |
AAACAACATGGAGGGCTAAG+AGG | 0.557593 | 4.4:+45243621 | None:intergenic |
CTACTAGCAACAAAAGGATA+GGG | 0.561385 | 4.4:-45237508 | MS.gene08679:CDS |
AGGGACTCTAAGGAAATCAA+TGG | 0.562592 | 4.4:-45237396 | MS.gene08679:CDS |
CCCGCGCCATCCATCACCTA+AGG | 0.565330 | 4.4:-45241258 | MS.gene08679:intron |
GTCCTGCATACCTTAGGTGA+TGG | 0.566537 | 4.4:+45241248 | None:intergenic |
GGATCAAGCAGTGACCTAGT+TGG | 0.569135 | 4.4:+45240794 | None:intergenic |
TAACGGGCTGCAAAAGAAAG+AGG | 0.569855 | 4.4:-45243121 | MS.gene08679:CDS |
TTCAGAAGAGTCCATTCCTA+GGG | 0.570102 | 4.4:-45240513 | MS.gene08679:CDS |
TGCATACCTTAGGTGATGGA+TGG | 0.572769 | 4.4:+45241252 | None:intergenic |
AGGACCAATATCCCTAGGAA+TGG | 0.574284 | 4.4:+45240502 | None:intergenic |
GTTGTGAGTGCTGGTAGGAG+TGG | 0.575062 | 4.4:+45243814 | None:intergenic |
TCATTCTCTTCTGATAGAAG+TGG | 0.575222 | 4.4:+45240773 | None:intergenic |
GCAGTAGTAATGTTCATGAA+AGG | 0.578237 | 4.4:-45241487 | MS.gene08679:CDS |
GGATGGCGCGGGTCACGCAT+AGG | 0.579444 | 4.4:+45241269 | None:intergenic |
TAGTAATGTTCATGAAAGGA+TGG | 0.582716 | 4.4:-45241483 | MS.gene08679:CDS |
AGAAGATGATGACACAAGCT+TGG | 0.584470 | 4.4:+45243671 | None:intergenic |
TATTGAAATTCATAGTCATA+GGG | 0.588176 | 4.4:+45237314 | None:intergenic |
GCGCGGGTCACGCATAGGCG+AGG | 0.588761 | 4.4:+45241274 | None:intergenic |
ATCTAGTTGAGTATGATCCA+TGG | 0.591663 | 4.4:+45243557 | None:intergenic |
GTGTAGGCAACCCTCAACAT+AGG | 0.591704 | 4.4:-45239335 | MS.gene08679:intron |
TTGTAAGGACCAATATCCCT+AGG | 0.593631 | 4.4:+45240497 | None:intergenic |
CTTAGTAATGGAATAGACGA+AGG | 0.594047 | 4.4:+45240422 | None:intergenic |
ACTCAGAACATCAAGAGCAA+TGG | 0.595023 | 4.4:-45240681 | MS.gene08679:CDS |
TTGTGAGTGCTGGTAGGAGT+GGG | 0.597509 | 4.4:+45243815 | None:intergenic |
AAGGATGGCATTTGAAACAA+AGG | 0.605174 | 4.4:-45241468 | MS.gene08679:CDS |
TTCATAAGTAAAGCTATCAA+GGG | 0.605273 | 4.4:-45241437 | MS.gene08679:CDS |
ATATTGATTCACTAGTGGAA+TGG | 0.609296 | 4.4:-45237442 | MS.gene08679:CDS |
CCTTAGGTGATGGATGGCGC+GGG | 0.611524 | 4.4:+45241258 | None:intergenic |
TCAATGGTTGAATGCTTTAG+GGG | 0.617208 | 4.4:-45237380 | MS.gene08679:CDS |
TAGGCAACCCTCAACATAGG+AGG | 0.618243 | 4.4:-45239332 | MS.gene08679:CDS |
CAATGTTAAAACAACATGGA+GGG | 0.621628 | 4.4:+45243613 | None:intergenic |
TTAGTAATGGAATAGACGAA+GGG | 0.623130 | 4.4:+45240423 | None:intergenic |
GGGTCATGGTGGTAATGTCA+AGG | 0.624183 | 4.4:-45237360 | MS.gene08679:CDS |
ACTTACAATATCAATGTGAG+AGG | 0.626776 | 4.4:+45243512 | None:intergenic |
GGGTCACGCATAGGCGAGGG+AGG | 0.627228 | 4.4:+45241278 | None:intergenic |
ATTGTTAGCAGAGCTAGTCA+TGG | 0.628790 | 4.4:-45241690 | MS.gene08679:CDS |
GGGTCGATCCCAGATCGACC+CGG | 0.632482 | 4.4:+45240597 | None:intergenic |
ACTCACAACCACAACAAAGA+CGG | 0.640564 | 4.4:-45243800 | MS.gene08679:CDS |
ACCAAGTCTTATGTTGCACA+AGG | 0.641062 | 4.4:-45240570 | MS.gene08679:CDS |
TGCACTTGGATCTTCCAACT+AGG | 0.652722 | 4.4:-45240808 | MS.gene08679:CDS |
GTGAGGATATACACAGGCGA+TGG | 0.656690 | 4.4:-45237587 | MS.gene08679:CDS |
TGTGGATATTGATTCACTAG+TGG | 0.661093 | 4.4:-45237447 | MS.gene08679:CDS |
ACGTAATCTAGACATGCACT+TGG | 0.661998 | 4.4:-45240822 | MS.gene08679:CDS |
CTTACAATATCAATGTGAGA+GGG | 0.665631 | 4.4:+45243513 | None:intergenic |
GTTAATTGGATTGATTAACA+AGG | 0.665903 | 4.4:-45239877 | MS.gene08679:intron |
GAAACAATGTTAAAACAACA+TGG | 0.666195 | 4.4:+45243609 | None:intergenic |
ATGGCATGCTTTAGGCACAA+AGG | 0.670868 | 4.4:-45239158 | MS.gene08679:intron |
GCTTTAGGCACAAAGGAAGG+GGG | 0.676472 | 4.4:-45239151 | MS.gene08679:intron |
ACAATGTTAAAACAACATGG+AGG | 0.677704 | 4.4:+45243612 | None:intergenic |
GAATGCTTTAGGGGTCATGG+TGG | 0.682567 | 4.4:-45237371 | MS.gene08679:CDS |
ATTCAGGTGAGGATATACAC+AGG | 0.732856 | 4.4:-45237593 | MS.gene08679:intron |
ACATGAACAAGAAATCACCA+AGG | 0.745029 | 4.4:-45241609 | MS.gene08679:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTATATATATTTTTTAT+TGG | - | chr4.4:45238056-45238075 | MS.gene08679:intron | 0.0% |
!! | AAAAAATATGAAATTATTAG+TGG | - | chr4.4:45243262-45243281 | MS.gene08679:intron | 10.0% |
!! | ATTAAATATGTAAAACAATA+TGG | - | chr4.4:45241943-45241962 | MS.gene08679:intron | 10.0% |
!! | ATTATTCCTATAAATATATA+GGG | - | chr4.4:45238684-45238703 | MS.gene08679:intron | 10.0% |
!! | TATTATTCCTATAAATATAT+AGG | - | chr4.4:45238683-45238702 | MS.gene08679:intron | 10.0% |
!! | TTGTTACATATTAAATTTAT+TGG | - | chr4.4:45243221-45243240 | MS.gene08679:intron | 10.0% |
!!! | TAATGTATATTTTTGTTATA+GGG | - | chr4.4:45241184-45241203 | MS.gene08679:intron | 10.0% |
!!! | TACTATAAATTATTTTAAGA+GGG | - | chr4.4:45241524-45241543 | MS.gene08679:CDS | 10.0% |
!!! | TTAATGTATATTTTTGTTAT+AGG | - | chr4.4:45241183-45241202 | MS.gene08679:intron | 10.0% |
!!! | TTACTATAAATTATTTTAAG+AGG | - | chr4.4:45241523-45241542 | MS.gene08679:CDS | 10.0% |
!! | AAGAAACATATATAATAAGA+TGG | + | chr4.4:45240053-45240072 | None:intergenic | 15.0% |
!! | AATATTAGAATAATTGACAA+AGG | + | chr4.4:45242890-45242909 | None:intergenic | 15.0% |
!! | AATTATGATTTATGATATCT+AGG | + | chr4.4:45239977-45239996 | None:intergenic | 15.0% |
!! | ACTAATTAATGCTATATATT+TGG | - | chr4.4:45242920-45242939 | MS.gene08679:intron | 15.0% |
!! | ATATTAGAATAATTGACAAA+GGG | + | chr4.4:45242889-45242908 | None:intergenic | 15.0% |
!! | ATTATGATTTATGATATCTA+GGG | + | chr4.4:45239976-45239995 | None:intergenic | 15.0% |
!! | ATTGTAACAAAACTAATATT+TGG | - | chr4.4:45240229-45240248 | MS.gene08679:intron | 15.0% |
!! | ATTTCAATATTATAACCAAA+TGG | - | chr4.4:45241124-45241143 | MS.gene08679:intron | 15.0% |
!! | GTAAAATACAATTATAAAAG+TGG | - | chr4.4:45239179-45239198 | MS.gene08679:intron | 15.0% |
!! | TACAAAAAATAACAAGATTA+TGG | + | chr4.4:45241923-45241942 | None:intergenic | 15.0% |
!! | TTATTCCTATAAATATATAG+GGG | - | chr4.4:45238685-45238704 | MS.gene08679:intron | 15.0% |
!! | TTGAAAAAAGTAAAAAATCT+CGG | + | chr4.4:45242758-45242777 | None:intergenic | 15.0% |
!! | TTGTAACAAAACTAATATTT+GGG | - | chr4.4:45240230-45240249 | MS.gene08679:intron | 15.0% |
!! | TTTATAGTAATGTATTAAGA+TGG | - | chr4.4:45238470-45238489 | MS.gene08679:intron | 15.0% |
!!! | ATAGACTTGATTTTAAAAAT+TGG | - | chr4.4:45240172-45240191 | MS.gene08679:intron | 15.0% |
!!! | ATATCAAGACAATATTTTTA+AGG | + | chr4.4:45241271-45241290 | None:intergenic | 15.0% |
!!! | CAAGCAATTTTTTTTTTTAT+TGG | + | chr4.4:45239365-45239384 | None:intergenic | 15.0% |
!!! | TTAATTTGAAGCTAATATTT+TGG | - | chr4.4:45243411-45243430 | MS.gene08679:intron | 15.0% |
!! | AATATAATGTTATAGGGATA+TGG | - | chr4.4:45239034-45239053 | MS.gene08679:intron | 20.0% |
!! | AATATGTAACAAACAATTGT+TGG | + | chr4.4:45243213-45243232 | None:intergenic | 20.0% |
!! | AGAAAAATCATAAAACAGAA+TGG | - | chr4.4:45241728-45241747 | MS.gene08679:intron | 20.0% |
!! | ATATAATGTTATAGGGATAT+GGG | - | chr4.4:45239035-45239054 | MS.gene08679:intron | 20.0% |
!! | ATATATATAAATACGTAGCT+TGG | + | chr4.4:45238049-45238068 | None:intergenic | 20.0% |
!! | ATATTGAAATTCATAGTCAT+AGG | + | chr4.4:45243810-45243829 | None:intergenic | 20.0% |
!! | ATTAATTGCACAACATTTAA+AGG | - | chr4.4:45242344-45242363 | MS.gene08679:intron | 20.0% |
!! | ATTGAAAAACTATTATGTAG+CGG | - | chr4.4:45240832-45240851 | MS.gene08679:CDS | 20.0% |
!! | CAAGGTAATATAATGTTATA+GGG | - | chr4.4:45239028-45239047 | MS.gene08679:intron | 20.0% |
!! | CAATTCAATTCAACATTAAA+GGG | + | chr4.4:45241760-45241779 | None:intergenic | 20.0% |
!! | CTACTAGATCAATATATATA+TGG | + | chr4.4:45242192-45242211 | None:intergenic | 20.0% |
!! | GATGAATAAGAAAGAATTAT+AGG | - | chr4.4:45241146-45241165 | MS.gene08679:intron | 20.0% |
!! | GTAAAGCAAAAATATATATG+AGG | + | chr4.4:45238941-45238960 | None:intergenic | 20.0% |
!! | TAAAAACTTATACGTTCATT+TGG | + | chr4.4:45238218-45238237 | None:intergenic | 20.0% |
!! | TAGAATTATACTATGTATGA+AGG | + | chr4.4:45240890-45240909 | None:intergenic | 20.0% |
!! | TATTGAAATTCATAGTCATA+GGG | + | chr4.4:45243809-45243828 | None:intergenic | 20.0% |
!! | TATTGGATATGGTAAATAAT+AGG | - | chr4.4:45238855-45238874 | MS.gene08679:intron | 20.0% |
!! | TTAATTTAAATGTGAAGAAG+TGG | - | chr4.4:45242252-45242271 | MS.gene08679:CDS | 20.0% |
!! | TTCAATAATTTAACTGTTGA+TGG | + | chr4.4:45238314-45238333 | None:intergenic | 20.0% |
!! | TTTCGAATATAAATTGTGTT+AGG | - | chr4.4:45242635-45242654 | MS.gene08679:intron | 20.0% |
!!! | ACATAATAGTTTTTCAATTG+AGG | + | chr4.4:45240830-45240849 | None:intergenic | 20.0% |
!!! | ATTATTAGTGGATTAAAATG+AGG | - | chr4.4:45243274-45243293 | MS.gene08679:intron | 20.0% |
!!! | CAATAGAGCATTTTATTTTA+AGG | - | chr4.4:45241831-45241850 | MS.gene08679:intron | 20.0% |
!!! | TAATAAACCTTTTGATTTGA+TGG | + | chr4.4:45238131-45238150 | None:intergenic | 20.0% |
!!! | TAATTGTATTTTACCAGTTA+TGG | + | chr4.4:45239173-45239192 | None:intergenic | 20.0% |
!!! | TATAAATTATTTTAAGAGGG+TGG | - | chr4.4:45241527-45241546 | MS.gene08679:CDS | 20.0% |
!!! | TGTATGAAGGTTTTAAATAA+AGG | + | chr4.4:45240877-45240896 | None:intergenic | 20.0% |
!!! | TTAACAAGTCATATAGTTTT+CGG | + | chr4.4:45238774-45238793 | None:intergenic | 20.0% |
!!! | TTATTAGTGGATTAAAATGA+GGG | - | chr4.4:45243275-45243294 | MS.gene08679:intron | 20.0% |
!!! | TTTTTAAAATCAAGTCTATG+TGG | + | chr4.4:45240171-45240190 | None:intergenic | 20.0% |
! | AAAAGACACTTAAAAAGGAA+CGG | + | chr4.4:45242798-45242817 | None:intergenic | 25.0% |
! | AAACATTGAAACTTCATGTT+GGG | + | chr4.4:45239120-45239139 | None:intergenic | 25.0% |
! | AAACTTATAGTTCCAAAGTT+TGG | + | chr4.4:45238577-45238596 | None:intergenic | 25.0% |
! | AAATGCTACTATAGTCTATA+AGG | + | chr4.4:45242169-45242188 | None:intergenic | 25.0% |
! | AATCAATTTGCATTGTATTC+AGG | - | chr4.4:45243511-45243530 | MS.gene08679:intron | 25.0% |
! | AATCTAACCATCAAATCAAA+AGG | - | chr4.4:45238121-45238140 | MS.gene08679:intron | 25.0% |
! | AATTGTGTTAGGTTACATAT+TGG | - | chr4.4:45242646-45242665 | MS.gene08679:intron | 25.0% |
! | AATTTCATGAAAGAGTTACT+AGG | - | chr4.4:45239801-45239820 | MS.gene08679:intron | 25.0% |
! | ACATACATACACGAATAAAT+TGG | + | chr4.4:45239905-45239924 | None:intergenic | 25.0% |
! | ACATGAATAATGTACATATC+AGG | - | chr4.4:45240735-45240754 | MS.gene08679:CDS | 25.0% |
! | ACTTTCGAAAAAAAGATGTT+TGG | - | chr4.4:45241485-45241504 | MS.gene08679:CDS | 25.0% |
! | AGAAAAGGTTCATGAAATAT+TGG | - | chr4.4:45238838-45238857 | MS.gene08679:intron | 25.0% |
! | AGACAAAAAGAAAAAGACAA+GGG | + | chr4.4:45237961-45237980 | None:intergenic | 25.0% |
! | AGAGGAAAAAGAAAATTAAC+GGG | - | chr4.4:45237983-45238002 | MS.gene08679:intron | 25.0% |
! | AGGAATCTAAGTCAAAAATT+TGG | - | chr4.4:45239531-45239550 | MS.gene08679:intron | 25.0% |
! | AGTACTACTATGTTATTCAT+AGG | + | chr4.4:45243076-45243095 | None:intergenic | 25.0% |
! | AGTGGCATATATCATTAAAT+AGG | - | chr4.4:45238650-45238669 | MS.gene08679:intron | 25.0% |
! | ATAAAGCGCACAAAAAAAAT+AGG | - | chr4.4:45243161-45243180 | MS.gene08679:intron | 25.0% |
! | ATAATAAGATGGATGCTAAA+GGG | + | chr4.4:45240042-45240061 | None:intergenic | 25.0% |
! | ATACTAATTAGTCCAAACTT+TGG | - | chr4.4:45238562-45238581 | MS.gene08679:intron | 25.0% |
! | ATTAATTGCACAGCATTTAA+AGG | - | chr4.4:45242473-45242492 | MS.gene08679:intron | 25.0% |
! | CAAAAAAAATAGGAATCTGT+TGG | - | chr4.4:45243171-45243190 | MS.gene08679:intron | 25.0% |
! | CAGAGGAAAAAGAAAATTAA+CGG | - | chr4.4:45237982-45238001 | MS.gene08679:intron | 25.0% |
! | CATACATACACGAATAAATT+GGG | + | chr4.4:45239904-45239923 | None:intergenic | 25.0% |
! | CATATCAGGAATTTAAATTG+TGG | - | chr4.4:45240749-45240768 | MS.gene08679:CDS | 25.0% |
! | CTATATGCCAAAAAATTCAA+TGG | - | chr4.4:45238715-45238734 | MS.gene08679:intron | 25.0% |
! | CTTAATATTGCAGTAAAATG+TGG | - | chr4.4:45237786-45237805 | MS.gene08679:intron | 25.0% |
! | GAAACAATGTTAAAACAACA+TGG | + | chr4.4:45237514-45237533 | None:intergenic | 25.0% |
! | GCAAGGTAATATAATGTTAT+AGG | - | chr4.4:45239027-45239046 | MS.gene08679:intron | 25.0% |
! | GCAATTCAATTCAACATTAA+AGG | + | chr4.4:45241761-45241780 | None:intergenic | 25.0% |
! | GTTAATTGGATTGATTAACA+AGG | - | chr4.4:45241243-45241262 | MS.gene08679:intron | 25.0% |
! | TAACACTGTTGTAATAAACT+AGG | - | chr4.4:45239202-45239221 | MS.gene08679:intron | 25.0% |
! | TAACTCCCCTATATATTTAT+AGG | + | chr4.4:45238693-45238712 | None:intergenic | 25.0% |
! | TAAGAAAGAATTATAGGACA+TGG | - | chr4.4:45241152-45241171 | MS.gene08679:intron | 25.0% |
! | TAGTATACTATTATGCATCA+TGG | - | chr4.4:45237724-45237743 | MS.gene08679:intron | 25.0% |
! | TATAATAAGATGGATGCTAA+AGG | + | chr4.4:45240043-45240062 | None:intergenic | 25.0% |
! | TTAAGGACAAAATTGTACAA+AGG | - | chr4.4:45243473-45243492 | MS.gene08679:intron | 25.0% |
! | TTAGTAGACAGAAATTGTAA+AGG | + | chr4.4:45237911-45237930 | None:intergenic | 25.0% |
! | TTATAGGGATTCATTCAATA+TGG | - | chr4.4:45241199-45241218 | MS.gene08679:intron | 25.0% |
! | TTCAAAACTTCATATATGCA+AGG | - | chr4.4:45239010-45239029 | MS.gene08679:intron | 25.0% |
! | TTCAGTCTTAATGAAAAAAC+AGG | - | chr4.4:45239725-45239744 | MS.gene08679:intron | 25.0% |
! | TTCATAAGTAAAGCTATCAA+GGG | - | chr4.4:45239683-45239702 | MS.gene08679:intron | 25.0% |
! | TTCTTTCTTATTCATCCATT+TGG | + | chr4.4:45241142-45241161 | None:intergenic | 25.0% |
! | TTGATGAAATTAAACTCGTA+TGG | + | chr4.4:45238103-45238122 | None:intergenic | 25.0% |
! | TTTCATAAGTAAAGCTATCA+AGG | - | chr4.4:45239682-45239701 | MS.gene08679:intron | 25.0% |
! | TTTCATGGAACTATTATCAT+AGG | + | chr4.4:45243044-45243063 | None:intergenic | 25.0% |
! | TTTGATATTGCAGAAAATTG+CGG | - | chr4.4:45240785-45240804 | MS.gene08679:CDS | 25.0% |
!! | ATCAACAGAAATTAGCATTT+TGG | - | chr4.4:45241034-45241053 | MS.gene08679:intron | 25.0% |
!! | GATTAAAATGAGGGTATAAT+AGG | - | chr4.4:45243284-45243303 | MS.gene08679:intron | 25.0% |
!! | TTTTACCAGTTATGGTTTAA+AGG | + | chr4.4:45239165-45239184 | None:intergenic | 25.0% |
!! | TTTTAGCCTCAATTTTGTTA+AGG | - | chr4.4:45243456-45243475 | MS.gene08679:intron | 25.0% |
!! | TTTTGTCCTTAACAAAATTG+AGG | + | chr4.4:45243465-45243484 | None:intergenic | 25.0% |
!!! | AAGTTTGCTATTTTTGCTAA+GGG | - | chr4.4:45238591-45238610 | MS.gene08679:intron | 25.0% |
!!! | AATTTTTGACTTAGATTCCT+TGG | + | chr4.4:45239531-45239550 | None:intergenic | 25.0% |
!!! | CATAGGATTTTAACTTTTCA+TGG | + | chr4.4:45243059-45243078 | None:intergenic | 25.0% |
!!! | CCTTTTTAAGTGTCTTTTTA+GGG | - | chr4.4:45242800-45242819 | MS.gene08679:intron | 25.0% |
!!! | CTAAATGCCATTGAATTTTT+TGG | + | chr4.4:45238725-45238744 | None:intergenic | 25.0% |
!!! | CTAATTTCTGTTGATTTGTA+AGG | + | chr4.4:45241029-45241048 | None:intergenic | 25.0% |
!!! | GACTTGTTAATGTAATAAAC+AGG | - | chr4.4:45238784-45238803 | MS.gene08679:intron | 25.0% |
!!! | TAAGTTTGCTATTTTTGCTA+AGG | - | chr4.4:45238590-45238609 | MS.gene08679:intron | 25.0% |
!!! | TCCTTTTTAAGTGTCTTTTT+AGG | - | chr4.4:45242799-45242818 | MS.gene08679:intron | 25.0% |
!!! | TGAAAATTTGTTGATGAAGT+TGG | + | chr4.4:45237369-45237388 | None:intergenic | 25.0% |
!!! | TTCTAAAACGACACTTAAAA+AGG | - | chr4.4:45243350-45243369 | MS.gene08679:intron | 25.0% |
AAAAAATAGGAATCTGTTGG+AGG | - | chr4.4:45243174-45243193 | MS.gene08679:intron | 30.0% | |
AAAACAATATGGCATGCTTT+AGG | - | chr4.4:45241954-45241973 | MS.gene08679:intron | 30.0% | |
AAACGACACTTAAAAAGGAA+CGG | - | chr4.4:45243355-45243374 | MS.gene08679:intron | 30.0% | |
AACATAACCAGATTCTTGTA+AGG | + | chr4.4:45240641-45240660 | None:intergenic | 30.0% | |
AACATTGAAACTTCATGTTG+GGG | + | chr4.4:45239119-45239138 | None:intergenic | 30.0% | |
AATCAATGGTTGAATGCTTT+AGG | - | chr4.4:45243738-45243757 | MS.gene08679:CDS | 30.0% | |
AATTCTAAGCGTTTCATGTT+TGG | - | chr4.4:45237535-45237554 | MS.gene08679:CDS | 30.0% | |
ACAATGTTAAAACAACATGG+AGG | + | chr4.4:45237511-45237530 | None:intergenic | 30.0% | |
ACACATAACTTCTCTTTCTT+TGG | - | chr4.4:45237424-45237443 | MS.gene08679:CDS | 30.0% | |
ACCTTAGAAGGAAGAAAATT+GGG | + | chr4.4:45238905-45238924 | None:intergenic | 30.0% | |
ACGCTATGAAAATTTAGCTA+GGG | + | chr4.4:45238979-45238998 | None:intergenic | 30.0% | |
ACTTACAATATCAATGTGAG+AGG | + | chr4.4:45237611-45237630 | None:intergenic | 30.0% | |
AGATGCTTCTAATATGAAAG+AGG | - | chr4.4:45241859-45241878 | MS.gene08679:intron | 30.0% | |
AGGCTATAGACATTAGAAAT+TGG | + | chr4.4:45240090-45240109 | None:intergenic | 30.0% | |
AGTTAGAGTGACATATATAG+AGG | - | chr4.4:45238394-45238413 | MS.gene08679:intron | 30.0% | |
ATATTGATCTAGTAGCATAG+TGG | - | chr4.4:45242197-45242216 | MS.gene08679:intron | 30.0% | |
ATATTGCAGTAAAATGTGGT+TGG | - | chr4.4:45237790-45237809 | MS.gene08679:intron | 30.0% | |
ATCAATGGTTGAATGCTTTA+GGG | - | chr4.4:45243739-45243758 | MS.gene08679:CDS | 30.0% | |
ATCATAAAACAGAATGGCAA+TGG | - | chr4.4:45241734-45241753 | MS.gene08679:intron | 30.0% | |
ATGGTAAATAATAGGCCAAA+CGG | - | chr4.4:45238863-45238882 | MS.gene08679:intron | 30.0% | |
ATTCTAAGCGTTTCATGTTT+GGG | - | chr4.4:45237536-45237555 | MS.gene08679:CDS | 30.0% | |
CAAAATCAAGCATGTTTCTT+AGG | + | chr4.4:45243652-45243671 | None:intergenic | 30.0% | |
CAATGTTAAAACAACATGGA+GGG | + | chr4.4:45237510-45237529 | None:intergenic | 30.0% | |
CAGACAAAAAGAAAAAGACA+AGG | + | chr4.4:45237962-45237981 | None:intergenic | 30.0% | |
CCCTAAAAAGACACTTAAAA+AGG | + | chr4.4:45242803-45242822 | None:intergenic | 30.0% | |
CTTACAATATCAATGTGAGA+GGG | + | chr4.4:45237610-45237629 | None:intergenic | 30.0% | |
CTTCTTCATCTTCATAATGT+TGG | + | chr4.4:45237477-45237496 | None:intergenic | 30.0% | |
GAAACATTGAAACTTCATGT+TGG | + | chr4.4:45239121-45239140 | None:intergenic | 30.0% | |
GAAAGAGTTACTAGGAAAAA+TGG | - | chr4.4:45239809-45239828 | MS.gene08679:intron | 30.0% | |
GAACATTGTATTACCTTAGA+AGG | + | chr4.4:45238917-45238936 | None:intergenic | 30.0% | |
GGTTCATGAAATATTGGATA+TGG | - | chr4.4:45238844-45238863 | MS.gene08679:intron | 30.0% | |
GTGGTATAATGTGTATGTTT+GGG | + | chr4.4:45242120-45242139 | None:intergenic | 30.0% | |
TACCAGAACGATAGTTAAAT+AGG | + | chr4.4:45242839-45242858 | None:intergenic | 30.0% | |
TACCTTAACTTCCTTAGTAA+TGG | + | chr4.4:45240713-45240732 | None:intergenic | 30.0% | |
TACCTTAGAAGGAAGAAAAT+TGG | + | chr4.4:45238906-45238925 | None:intergenic | 30.0% | |
TAGTAATGTTCATGAAAGGA+TGG | - | chr4.4:45239637-45239656 | MS.gene08679:intron | 30.0% | |
TCATTGCATAACTTATGCAA+GGG | + | chr4.4:45242301-45242320 | None:intergenic | 30.0% | |
TCTGAATCAAAGATACCATA+TGG | + | chr4.4:45240593-45240612 | None:intergenic | 30.0% | |
TGAATAGAATAAGCAAACTG+TGG | + | chr4.4:45242139-45242158 | None:intergenic | 30.0% | |
TGAATCTGATATTGTGTGTT+CGG | - | chr4.4:45242425-45242444 | MS.gene08679:intron | 30.0% | |
TGTGGTATAATGTGTATGTT+TGG | + | chr4.4:45242121-45242140 | None:intergenic | 30.0% | |
TTAATGATATATGCCACTGA+GGG | + | chr4.4:45238648-45238667 | None:intergenic | 30.0% | |
TTCATTGCATAACTTATGCA+AGG | + | chr4.4:45242302-45242321 | None:intergenic | 30.0% | |
TTCCATTACTAAGGAAGTTA+AGG | - | chr4.4:45240708-45240727 | MS.gene08679:CDS | 30.0% | |
TTCCTATTTAACTATCGTTC+TGG | - | chr4.4:45242834-45242853 | MS.gene08679:intron | 30.0% | |
TTTAATGATATATGCCACTG+AGG | + | chr4.4:45238649-45238668 | None:intergenic | 30.0% | |
! | AAGTCAAAAATTTGGAACCA+AGG | - | chr4.4:45239539-45239558 | MS.gene08679:intron | 30.0% |
! | ACTATCGTTCTGGTATTTTA+AGG | - | chr4.4:45242844-45242863 | MS.gene08679:intron | 30.0% |
! | AGTCAAAAATTTGGAACCAA+GGG | - | chr4.4:45239540-45239559 | MS.gene08679:intron | 30.0% |
! | AGTGATTGGTTGCAAATATT+AGG | + | chr4.4:45240257-45240276 | None:intergenic | 30.0% |
! | CAATCCAATTAACTTTTCTG+AGG | + | chr4.4:45241236-45241255 | None:intergenic | 30.0% |
! | GAATTGAATTGCTATTGTGT+AGG | - | chr4.4:45241769-45241788 | MS.gene08679:intron | 30.0% |
! | GCAGAAAGAAAATAGTTTTC+AGG | - | chr4.4:45239769-45239788 | MS.gene08679:intron | 30.0% |
! | TAAATTGCGGTTGTAGTTTT+TGG | - | chr4.4:45237750-45237769 | MS.gene08679:intron | 30.0% |
! | TATGTTCACTTCAAGTTCTA+TGG | - | chr4.4:45240655-45240674 | MS.gene08679:CDS | 30.0% |
! | TTAGTAATGGAATAGACGAA+GGG | + | chr4.4:45240700-45240719 | None:intergenic | 30.0% |
! | TTTCATGAACCTTTTCTTCT+TGG | + | chr4.4:45238835-45238854 | None:intergenic | 30.0% |
!! | AATTGTGCAATTTTGACCTT+TGG | - | chr4.4:45239993-45240012 | MS.gene08679:intron | 30.0% |
!! | AGTTTGAAGAGTGCTAATTT+GGG | + | chr4.4:45239483-45239502 | None:intergenic | 30.0% |
!! | ATAGGGTATCTTTTCAACAA+TGG | + | chr4.4:45243792-45243811 | None:intergenic | 30.0% |
!! | ATATTGATTCACTAGTGGAA+TGG | - | chr4.4:45243678-45243697 | MS.gene08679:CDS | 30.0% |
!! | ATGCTTTCAGATAACTTGTT+TGG | + | chr4.4:45240386-45240405 | None:intergenic | 30.0% |
!! | CTATCGTTCTGGTATTTTAA+GGG | - | chr4.4:45242845-45242864 | MS.gene08679:intron | 30.0% |
!! | GAAAGAAAATAGTTTTCAGG+AGG | - | chr4.4:45239772-45239791 | MS.gene08679:intron | 30.0% |
!! | GAACTTGAAAAAGAGGTATT+TGG | - | chr4.4:45238021-45238040 | MS.gene08679:intron | 30.0% |
!! | GGATTTTAGTATGTTTCTTG+TGG | - | chr4.4:45240957-45240976 | MS.gene08679:intron | 30.0% |
!! | TATTGATTCACTAGTGGAAT+GGG | - | chr4.4:45243679-45243698 | MS.gene08679:CDS | 30.0% |
!!! | TGCATCATGGTTTTAAATTG+CGG | - | chr4.4:45237737-45237756 | MS.gene08679:intron | 30.0% |
!!! | TTGGTTTTATCATTCTCACA+AGG | - | chr4.4:45242665-45242684 | MS.gene08679:intron | 30.0% |
AACAATATTGCAATCCTCGA+TGG | + | chr4.4:45237878-45237897 | None:intergenic | 35.0% | |
AACATCAAGAGCAATGGAAT+TGG | - | chr4.4:45240445-45240464 | MS.gene08679:CDS | 35.0% | |
ACATGAACAAGAAATCACCA+AGG | - | chr4.4:45239511-45239530 | MS.gene08679:intron | 35.0% | |
ACATTGAAACTTCATGTTGG+GGG | + | chr4.4:45239118-45239137 | None:intergenic | 35.0% | |
ACTTTATGGGCTTGAATTTG+TGG | - | chr4.4:45242023-45242042 | MS.gene08679:intron | 35.0% | |
AGTCTTCTTACATGCATGTA+TGG | + | chr4.4:45239085-45239104 | None:intergenic | 35.0% | |
AGTGACATATATAGAGGAGA+GGG | - | chr4.4:45238400-45238419 | MS.gene08679:intron | 35.0% | |
AGTTATGTGTTGAAGTTGAG+AGG | + | chr4.4:45237414-45237433 | None:intergenic | 35.0% | |
ATAGATATAGCTGAACCGTT+TGG | + | chr4.4:45238881-45238900 | None:intergenic | 35.0% | |
ATCTAGTTGAGTATGATCCA+TGG | + | chr4.4:45237566-45237585 | None:intergenic | 35.0% | |
ATGCTTGTATCATGCATGTA+TGG | - | chr4.4:45241070-45241089 | MS.gene08679:intron | 35.0% | |
ATGTTTCTTAGGAGAAGTTC+TGG | + | chr4.4:45243641-45243660 | None:intergenic | 35.0% | |
ATTTGCATTGTATTCAGGTG+AGG | - | chr4.4:45243516-45243535 | MS.gene08679:intron | 35.0% | |
CAAATTAGCACTCTTCAAAC+TGG | - | chr4.4:45239482-45239501 | MS.gene08679:intron | 35.0% | |
CACGCTATGAAAATTTAGCT+AGG | + | chr4.4:45238980-45238999 | None:intergenic | 35.0% | |
CAGTTGTACGTGAACTTTAT+GGG | - | chr4.4:45242010-45242029 | MS.gene08679:intron | 35.0% | |
CGACACTTGTCATTATATCA+TGG | + | chr4.4:45241332-45241351 | None:intergenic | 35.0% | |
CTACTAGCAACAAAAGGATA+GGG | - | chr4.4:45243612-45243631 | MS.gene08679:CDS | 35.0% | |
CTATCTTCAAGCTTCAATTC+TGG | - | chr4.4:45243589-45243608 | MS.gene08679:CDS | 35.0% | |
CTTCGTCTATTCCATTACTA+AGG | - | chr4.4:45240699-45240718 | MS.gene08679:CDS | 35.0% | |
CTTGCAAATTTCGCAACATT+TGG | + | chr4.4:45240930-45240949 | None:intergenic | 35.0% | |
GAAAGAGGAACTTGAAAAAG+AGG | - | chr4.4:45238014-45238033 | MS.gene08679:intron | 35.0% | |
GAAGGGCTTGATATAAACTT+TGG | + | chr4.4:45240683-45240702 | None:intergenic | 35.0% | |
GAATGCAATGATCTTGAAAC+AGG | + | chr4.4:45240482-45240501 | None:intergenic | 35.0% | |
GATAAAAACCGTCTTTGTTG+TGG | + | chr4.4:45237331-45237350 | None:intergenic | 35.0% | |
GATTAAGAATTGTTCCATCG+AGG | - | chr4.4:45237861-45237880 | MS.gene08679:intron | 35.0% | |
GCAATGGAATTGGAAAAATC+AGG | - | chr4.4:45240455-45240474 | MS.gene08679:CDS | 35.0% | |
GCAGTAGTAATGTTCATGAA+AGG | - | chr4.4:45239633-45239652 | MS.gene08679:intron | 35.0% | |
GCTAGCTATAATTGTGTGTT+TGG | - | chr4.4:45242366-45242385 | MS.gene08679:intron | 35.0% | |
GCTGAAAATAGTACAGTGAT+TGG | + | chr4.4:45240271-45240290 | None:intergenic | 35.0% | |
GTTATGTGTTGAAGTTGAGA+GGG | + | chr4.4:45237413-45237432 | None:intergenic | 35.0% | |
TAATGATATATGCCACTGAG+GGG | + | chr4.4:45238647-45238666 | None:intergenic | 35.0% | |
TATTGGTCCTTACAAGAATC+TGG | - | chr4.4:45240631-45240650 | MS.gene08679:CDS | 35.0% | |
TCAATGGTTGAATGCTTTAG+GGG | - | chr4.4:45243740-45243759 | MS.gene08679:CDS | 35.0% | |
TCAATGTTTCGTCATCACTT+AGG | - | chr4.4:45239131-45239150 | MS.gene08679:CDS | 35.0% | |
TCAGTTGTACGTGAACTTTA+TGG | - | chr4.4:45242009-45242028 | MS.gene08679:intron | 35.0% | |
TCATTCTCTTCTGATAGAAG+TGG | + | chr4.4:45240350-45240369 | None:intergenic | 35.0% | |
TCCACCTCAGAAAAGTTAAT+TGG | - | chr4.4:45241229-45241248 | MS.gene08679:intron | 35.0% | |
TCTAATGTCTATAGCCTATG+TGG | - | chr4.4:45240093-45240112 | MS.gene08679:CDS | 35.0% | |
TTATGTTGCACAAGGAATCA+AGG | - | chr4.4:45240558-45240577 | MS.gene08679:CDS | 35.0% | |
TTGGTCCTTTAAACCATAAC+TGG | - | chr4.4:45239157-45239176 | MS.gene08679:intron | 35.0% | |
! | AAACATGCTTGATTTTGCTG+TGG | - | chr4.4:45243655-45243674 | MS.gene08679:CDS | 35.0% |
! | AAGGATGGCATTTGAAACAA+AGG | - | chr4.4:45239652-45239671 | MS.gene08679:intron | 35.0% |
! | ACTGTACTATTTTCAGCTGA+GGG | - | chr4.4:45240274-45240293 | MS.gene08679:intron | 35.0% |
! | CAACATAAGACTTGGTTTCT+GGG | + | chr4.4:45240546-45240565 | None:intergenic | 35.0% |
! | CTTAGTAATGGAATAGACGA+AGG | + | chr4.4:45240701-45240720 | None:intergenic | 35.0% |
! | CTTTTTCTTTTTGTCTGCAG+AGG | - | chr4.4:45237965-45237984 | MS.gene08679:intron | 35.0% |
! | TCCCAATTTTCTTCCTTCTA+AGG | - | chr4.4:45238901-45238920 | MS.gene08679:intron | 35.0% |
! | TGAACTCAGTCATAGCTTTT+TGG | + | chr4.4:45238521-45238540 | None:intergenic | 35.0% |
!! | CAGTTTGAAGAGTGCTAATT+TGG | + | chr4.4:45239484-45239503 | None:intergenic | 35.0% |
!! | CTTCAGACAGTTGATTTGAA+AGG | - | chr4.4:45241003-45241022 | MS.gene08679:intron | 35.0% |
!! | TCAGTCATAGCTTTTTGGAA+AGG | + | chr4.4:45238516-45238535 | None:intergenic | 35.0% |
!! | TCCAATTAACTTTTCTGAGG+TGG | + | chr4.4:45241233-45241252 | None:intergenic | 35.0% |
!! | TGTGGATATTGATTCACTAG+TGG | - | chr4.4:45243673-45243692 | MS.gene08679:CDS | 35.0% |
!! | TTTTTCAATTGAGGTTGCGT+CGG | + | chr4.4:45240821-45240840 | None:intergenic | 35.0% |
!!! | ATTAACTTTTCTGAGGTGGA+TGG | + | chr4.4:45241229-45241248 | None:intergenic | 35.0% |
AAAAGCCGATACTGTTAGGT+TGG | - | chr4.4:45239260-45239279 | MS.gene08679:intron | 40.0% | |
AAATTCGTCCTGCATACCTT+AGG | + | chr4.4:45239881-45239900 | None:intergenic | 40.0% | |
AACAGGTCACTATGCTTCAA+AGG | - | chr4.4:45238801-45238820 | MS.gene08679:intron | 40.0% | |
ACGTAATCTAGACATGCACT+TGG | - | chr4.4:45240298-45240317 | MS.gene08679:intron | 40.0% | |
ACTCACAACCACAACAAAGA+CGG | - | chr4.4:45237320-45237339 | MS.gene08679:CDS | 40.0% | |
ACTCAGAACATCAAGAGCAA+TGG | - | chr4.4:45240439-45240458 | MS.gene08679:CDS | 40.0% | |
AGAAGATGATGACACAAGCT+TGG | + | chr4.4:45237452-45237471 | None:intergenic | 40.0% | |
AGACACTTAAAAAGGAACGG+AGG | + | chr4.4:45242795-45242814 | None:intergenic | 40.0% | |
ATCAAGTCTATGTGGTACAG+AGG | + | chr4.4:45240163-45240182 | None:intergenic | 40.0% | |
ATTCAGAAGAGTCCATTCCT+AGG | - | chr4.4:45240606-45240625 | MS.gene08679:CDS | 40.0% | |
ATTCAGGTGAGGATATACAC+AGG | - | chr4.4:45243527-45243546 | MS.gene08679:CDS | 40.0% | |
ATTGTTAGCAGAGCTAGTCA+TGG | - | chr4.4:45239430-45239449 | MS.gene08679:intron | 40.0% | |
CACTATGCTTCAAAGGTTGT+TGG | - | chr4.4:45238808-45238827 | MS.gene08679:intron | 40.0% | |
CAGAAGAGAATGACCTAAAG+TGG | - | chr4.4:45240357-45240376 | MS.gene08679:intron | 40.0% | |
CAGAGAGCAAATGTGACATT+TGG | + | chr4.4:45242051-45242070 | None:intergenic | 40.0% | |
CATTGCTCATCAAATTCCCT+TGG | + | chr4.4:45239559-45239578 | None:intergenic | 40.0% | |
CTAGTAGCTTCTCACAAACA+TGG | + | chr4.4:45237707-45237726 | None:intergenic | 40.0% | |
CTGCTTCTTTGAACAGAACT+AGG | + | chr4.4:45239617-45239636 | None:intergenic | 40.0% | |
CTTTAAGCTCAAGAAGCTTC+CGG | - | chr4.4:45240504-45240523 | MS.gene08679:CDS | 40.0% | |
GACACTTAAAAAGGAACGGA+GGG | + | chr4.4:45243378-45243359 | None:intergenic | 40.0% | |
GACACTTAAAAAGGAACGGA+TGG | - | chr4.4:45243359-45243378 | MS.gene08679:intron | 40.0% | |
GACTTCCAACCTAACAGTAT+CGG | + | chr4.4:45239268-45239287 | None:intergenic | 40.0% | |
GAGTGACATATATAGAGGAG+AGG | - | chr4.4:45238399-45238418 | MS.gene08679:intron | 40.0% | |
GCAAAAAAGCCGATACTGTT+AGG | - | chr4.4:45239256-45239275 | MS.gene08679:intron | 40.0% | |
GCGAAATTTGCAAGTTTCAC+TGG | - | chr4.4:45240936-45240955 | MS.gene08679:intron | 40.0% | |
GCTACTAGCAACAAAAGGAT+AGG | - | chr4.4:45243611-45243630 | MS.gene08679:CDS | 40.0% | |
GTATGTTTCTTGTGGCTTAC+AGG | - | chr4.4:45240965-45240984 | MS.gene08679:intron | 40.0% | |
GTCTAAGTTGCGACTAACTT+CGG | + | chr4.4:45240141-45240160 | None:intergenic | 40.0% | |
GTTGTTGGACCAAGAAGAAA+AGG | - | chr4.4:45238823-45238842 | MS.gene08679:intron | 40.0% | |
TAAAATGTGGTTGGCATGAC+TGG | - | chr4.4:45237799-45237818 | MS.gene08679:intron | 40.0% | |
TATGTTGCCTCCTATGTTGA+GGG | + | chr4.4:45241798-45241817 | None:intergenic | 40.0% | |
TCCTTGTGCAACATAAGACT+TGG | + | chr4.4:45240554-45240573 | None:intergenic | 40.0% | |
TCGCGCAACTAAAATACCAA+AGG | + | chr4.4:45240012-45240031 | None:intergenic | 40.0% | |
TGATCTAGTAGCATAGTGGT+TGG | - | chr4.4:45242201-45242220 | MS.gene08679:intron | 40.0% | |
TTATGTTGCCTCCTATGTTG+AGG | + | chr4.4:45241799-45241818 | None:intergenic | 40.0% | |
TTCAGAAGAGTCCATTCCTA+GGG | - | chr4.4:45240607-45240626 | MS.gene08679:CDS | 40.0% | |
TTCGTCATCACTTAGGAGTT+TGG | - | chr4.4:45239138-45239157 | MS.gene08679:CDS | 40.0% | |
TTGTAAGGACCAATATCCCT+AGG | + | chr4.4:45240626-45240645 | None:intergenic | 40.0% | |
TTGTGTGTGCGAGTTTGTAA+TGG | - | chr4.4:45239319-45239338 | MS.gene08679:CDS | 40.0% | |
TTTAAGCTCAAGAAGCTTCC+GGG | - | chr4.4:45240505-45240524 | MS.gene08679:CDS | 40.0% | |
TTTCATGTTTGGGTCTTCCA+TGG | - | chr4.4:45237546-45237565 | MS.gene08679:CDS | 40.0% | |
! | ACCAAGTCTTATGTTGCACA+AGG | - | chr4.4:45240550-45240569 | MS.gene08679:CDS | 40.0% |
! | AGGGACTCTAAGGAAATCAA+TGG | - | chr4.4:45243724-45243743 | MS.gene08679:CDS | 40.0% |
! | ATGCTTTAGGCACAAAGGAA+GGG | - | chr4.4:45241967-45241986 | MS.gene08679:intron | 40.0% |
! | CACTGTACTATTTTCAGCTG+AGG | - | chr4.4:45240273-45240292 | MS.gene08679:intron | 40.0% |
! | GCAACATAAGACTTGGTTTC+TGG | + | chr4.4:45240547-45240566 | None:intergenic | 40.0% |
! | TTCTGGCTACTAGCAACAAA+AGG | - | chr4.4:45243606-45243625 | MS.gene08679:CDS | 40.0% |
!! | ACTTGTTTGGTTGCCACTTT+AGG | + | chr4.4:45240373-45240392 | None:intergenic | 40.0% |
!!! | GCTTTTTTGCCAGTTGAACT+AGG | + | chr4.4:45239246-45239265 | None:intergenic | 40.0% |
!!! | TGCTATTTTTGCTAAGGGAG+AGG | - | chr4.4:45238596-45238615 | MS.gene08679:intron | 40.0% |
AAACAACATGGAGGGCTAAG+AGG | + | chr4.4:45237502-45237521 | None:intergenic | 45.0% | |
AAGTTGCGACTAACTTCGGT+CGG | + | chr4.4:45240137-45240156 | None:intergenic | 45.0% | |
AGGACCAATATCCCTAGGAA+TGG | + | chr4.4:45240621-45240640 | None:intergenic | 45.0% | |
ATCCATCACCTAAGGTATGC+AGG | - | chr4.4:45239870-45239889 | MS.gene08679:intron | 45.0% | |
GAGTCCATTCCTAGGGATAT+TGG | - | chr4.4:45240614-45240633 | MS.gene08679:CDS | 45.0% | |
GCAACCAGTTACCTACTTCA+GGG | - | chr4.4:45243705-45243724 | MS.gene08679:CDS | 45.0% | |
GCTAGAAACACGATCCACAT+AGG | + | chr4.4:45240110-45240129 | None:intergenic | 45.0% | |
GTCACATTTGCTCTCTGTAG+TGG | - | chr4.4:45242054-45242073 | MS.gene08679:intron | 45.0% | |
TACAAACTCGCACACACAAG+TGG | + | chr4.4:45239318-45239337 | None:intergenic | 45.0% | |
TACCTACTTCAGGGACTCTA+AGG | - | chr4.4:45243714-45243733 | MS.gene08679:CDS | 45.0% | |
TCAAGGCAGCAAGATCCATA+TGG | - | chr4.4:45240575-45240594 | MS.gene08679:CDS | 45.0% | |
TCCACAAGTCCTAGTTCAAC+TGG | - | chr4.4:45239234-45239253 | MS.gene08679:intron | 45.0% | |
TGAGACGCTAGAATGAGTAC+AGG | + | chr4.4:45241302-45241321 | None:intergenic | 45.0% | |
TGCAACCAGTTACCTACTTC+AGG | - | chr4.4:45243704-45243723 | MS.gene08679:CDS | 45.0% | |
TGCACTTGGATCTTCCAACT+AGG | - | chr4.4:45240312-45240331 | MS.gene08679:intron | 45.0% | |
TGCATAACTTATGCAAGGGC+CGG | + | chr4.4:45242297-45242316 | None:intergenic | 45.0% | |
TGTACTCATTCTAGCGTCTC+AGG | - | chr4.4:45241301-45241320 | MS.gene08679:CDS | 45.0% | |
TGTGTATGTTTGGGTGTGTG+AGG | + | chr4.4:45242111-45242130 | None:intergenic | 45.0% | |
TTATGTAGCGGCCTAGATTG+TGG | - | chr4.4:45240844-45240863 | MS.gene08679:intron | 45.0% | |
TTCCTTAGAGTCCCTGAAGT+AGG | + | chr4.4:45243719-45243738 | None:intergenic | 45.0% | |
TTGAAACTTCATGTTGGGGG+TGG | + | chr4.4:45239115-45239134 | None:intergenic | 45.0% | |
! | ATGGCATGCTTTAGGCACAA+AGG | - | chr4.4:45241962-45241981 | MS.gene08679:intron | 45.0% |
! | ATGTGAAGAAGTGGAGTGTC+CGG | - | chr4.4:45242261-45242280 | MS.gene08679:CDS | 45.0% |
! | CATGCTTTAGGCACAAAGGA+AGG | - | chr4.4:45241966-45241985 | MS.gene08679:intron | 45.0% |
! | GAAGTTGAGAGGGACTTTTC+AGG | + | chr4.4:45237403-45237422 | None:intergenic | 45.0% |
! | TGCTTTAGGCACAAAGGAAG+GGG | - | chr4.4:45241968-45241987 | MS.gene08679:intron | 45.0% |
! | TTTGTTGTGGTTGTGAGTGC+TGG | + | chr4.4:45237318-45237337 | None:intergenic | 45.0% |
!! | GTTAGGTTGGAAGTCATGAC+CGG | - | chr4.4:45239273-45239292 | MS.gene08679:CDS | 45.0% |
!! | GTTGAATGCTTTAGGGGTCA+TGG | - | chr4.4:45243746-45243765 | MS.gene08679:CDS | 45.0% |
!! | TAACGGGCTGCAAAAGAAAG+AGG | - | chr4.4:45237999-45238018 | MS.gene08679:intron | 45.0% |
!! | TGCATACCTTAGGTGATGGA+TGG | + | chr4.4:45239871-45239890 | None:intergenic | 45.0% |
!! | TTAGGTTGGAAGTCATGACC+GGG | - | chr4.4:45239274-45239293 | MS.gene08679:CDS | 45.0% |
!!! | AAAATTAAATTTTCTTTATT+CGG | - | chr4.4:45241564-45241583 | MS.gene08679:CDS | 5.0% |
!!! | AATAACTTTTTTTTAATATA+AGG | - | chr4.4:45241442-45241461 | MS.gene08679:CDS | 5.0% |
AAACTCGCACACACAAGTGG+AGG | + | chr4.4:45239315-45239334 | None:intergenic | 50.0% | |
ATATATGCCACTGAGGGGCA+TGG | + | chr4.4:45238642-45238661 | None:intergenic | 50.0% | |
CATAACTTATGCAAGGGCCG+GGG | + | chr4.4:45242295-45242314 | None:intergenic | 50.0% | |
GAGTCCCTGAAGTAGGTAAC+TGG | + | chr4.4:45243712-45243731 | None:intergenic | 50.0% | |
GCATAACTTATGCAAGGGCC+GGG | + | chr4.4:45242296-45242315 | None:intergenic | 50.0% | |
GCCAGTTGAACTAGGACTTG+TGG | + | chr4.4:45239238-45239257 | None:intergenic | 50.0% | |
GGATCAAGCAGTGACCTAGT+TGG | + | chr4.4:45240329-45240348 | None:intergenic | 50.0% | |
GTATGTTTGGGTGTGTGAGG+AGG | + | chr4.4:45242108-45242127 | None:intergenic | 50.0% | |
GTCCTGCATACCTTAGGTGA+TGG | + | chr4.4:45239875-45239894 | None:intergenic | 50.0% | |
GTGAGGATATACACAGGCGA+TGG | - | chr4.4:45243533-45243552 | MS.gene08679:CDS | 50.0% | |
GTGTAGGCAACCCTCAACAT+AGG | - | chr4.4:45241785-45241804 | MS.gene08679:intron | 50.0% | |
TAGGCAACCCTCAACATAGG+AGG | - | chr4.4:45241788-45241807 | MS.gene08679:intron | 50.0% | |
TGAGGAGGTGAACTTACAGC+TGG | + | chr4.4:45242093-45242112 | None:intergenic | 50.0% | |
! | GCTTTAGGCACAAAGGAAGG+GGG | - | chr4.4:45241969-45241988 | MS.gene08679:intron | 50.0% |
! | GGGTCATGGTGGTAATGTCA+AGG | - | chr4.4:45243760-45243779 | MS.gene08679:CDS | 50.0% |
! | TAGGTTGGAAGTCATGACCG+GGG | - | chr4.4:45239275-45239294 | MS.gene08679:CDS | 50.0% |
! | TGTGAAGAAGTGGAGTGTCC+GGG | - | chr4.4:45242262-45242281 | MS.gene08679:CDS | 50.0% |
!! | GAATGCTTTAGGGGTCATGG+TGG | - | chr4.4:45243749-45243768 | MS.gene08679:CDS | 50.0% |
!! | TTGTGAGTGCTGGTAGGAGT+GGG | + | chr4.4:45237308-45237327 | None:intergenic | 50.0% |
!! | TTGTGGTTGTGAGTGCTGGT+AGG | + | chr4.4:45237314-45237333 | None:intergenic | 50.0% |
AAGAAGCTTCCGGGTCGATC+TGG | - | chr4.4:45240514-45240533 | MS.gene08679:CDS | 55.0% | |
AAGGCCTGCGACCACAATCT+AGG | + | chr4.4:45240858-45240877 | None:intergenic | 55.0% | |
AGAAGCTTCCGGGTCGATCT+GGG | - | chr4.4:45240515-45240534 | MS.gene08679:CDS | 55.0% | |
ATGAGAACCATGCCCCTCAG+TGG | - | chr4.4:45238632-45238651 | MS.gene08679:intron | 55.0% | |
! | GTGAAGAAGTGGAGTGTCCG+GGG | - | chr4.4:45242263-45242282 | MS.gene08679:CDS | 55.0% |
!! | ACACACAAGTGGAGGTGCCA+GGG | + | chr4.4:45239307-45239326 | None:intergenic | 55.0% |
!! | ACCTTAGGTGATGGATGGCG+CGG | + | chr4.4:45239866-45239885 | None:intergenic | 55.0% |
!! | GTTGTGAGTGCTGGTAGGAG+TGG | + | chr4.4:45237309-45237328 | None:intergenic | 55.0% |
AGGCACAAAGGAAGGGGGAG+TGG | - | chr4.4:45241974-45241993 | MS.gene08679:intron | 60.0% | |
AGGTGCCAGGGTTTGAACCC+CGG | + | chr4.4:45239295-45239314 | None:intergenic | 60.0% | |
CATGACCGGGGTTCAAACCC+TGG | - | chr4.4:45239287-45239306 | MS.gene08679:CDS | 60.0% | |
GGCACAAAGGAAGGGGGAGT+GGG | - | chr4.4:45241975-45241994 | MS.gene08679:intron | 60.0% | |
!! | CACACACAAGTGGAGGTGCC+AGG | + | chr4.4:45239308-45239327 | None:intergenic | 60.0% |
!! | CCTTAGGTGATGGATGGCGC+GGG | + | chr4.4:45239865-45239884 | None:intergenic | 60.0% |
AGTGTCCGGGGTTCGAACCC+CGG | - | chr4.4:45242275-45242294 | MS.gene08679:CDS | 65.0% | |
CCCGCGCCATCCATCACCTA+AGG | - | chr4.4:45239862-45239881 | MS.gene08679:intron | 65.0% | |
GCGGCCTAGATTGTGGTCGC+AGG | - | chr4.4:45240851-45240870 | MS.gene08679:intron | 65.0% | |
GGGTCGATCCCAGATCGACC+CGG | + | chr4.4:45240526-45240545 | None:intergenic | 65.0% | |
AAGGGCCGGGGTTCGAACCC+CGG | + | chr4.4:45242283-45242302 | None:intergenic | 70.0% | |
CGCGGGTCACGCATAGGCGA+GGG | + | chr4.4:45239848-45239867 | None:intergenic | 70.0% | |
GGATGGCGCGGGTCACGCAT+AGG | + | chr4.4:45239854-45239873 | None:intergenic | 70.0% | |
GGGTCACGCATAGGCGAGGG+AGG | + | chr4.4:45239845-45239864 | None:intergenic | 70.0% | |
GCGCGGGTCACGCATAGGCG+AGG | + | chr4.4:45239849-45239868 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 45237298 | 45243844 | 45237298 | ID=MS.gene08679 |
chr4.4 | mRNA | 45237298 | 45243844 | 45237298 | ID=MS.gene08679.t1;Parent=MS.gene08679 |
chr4.4 | exon | 45243518 | 45243844 | 45243518 | ID=MS.gene08679.t1.exon1;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45243518 | 45243844 | 45243518 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45243107 | 45243157 | 45243107 | ID=MS.gene08679.t1.exon2;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45243107 | 45243157 | 45243107 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45242220 | 45242336 | 45242220 | ID=MS.gene08679.t1.exon3;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45242220 | 45242336 | 45242220 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45241259 | 45241720 | 45241259 | ID=MS.gene08679.t1.exon4;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45241259 | 45241720 | 45241259 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45240413 | 45240852 | 45240413 | ID=MS.gene08679.t1.exon5;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45240413 | 45240852 | 45240413 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45240056 | 45240155 | 45240056 | ID=MS.gene08679.t1.exon6;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45240056 | 45240155 | 45240056 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45239878 | 45239937 | 45239878 | ID=MS.gene08679.t1.exon7;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45239878 | 45239937 | 45239878 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45239262 | 45239351 | 45239262 | ID=MS.gene08679.t1.exon8;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45239262 | 45239351 | 45239262 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45239047 | 45239166 | 45239047 | ID=MS.gene08679.t1.exon9;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45239047 | 45239166 | 45239047 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
chr4.4 | exon | 45237298 | 45237609 | 45237298 | ID=MS.gene08679.t1.exon10;Parent=MS.gene08679.t1 |
chr4.4 | CDS | 45237298 | 45237609 | 45237298 | ID=cds.MS.gene08679.t1;Parent=MS.gene08679.t1 |
Gene Sequence |
Protein sequence |