Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09650.t1 | AES94443.2 | 97 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 1.50E-156 | 562.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09650.t1 | G7K117 | 97.0 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 1.1e-156 | 562.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04938 | MS.gene09650 | 0.849602 | 2.91E-60 | -1.69E-46 |
| MS.gene04939 | MS.gene09650 | 0.8502 | 1.98E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene09650 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene09650 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene09650 | 0.823997 | 1.02E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene09650 | 0.820806 | 5.65E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene09650 | 0.82901 | 6.54E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09650.t1 | MTR_5g014430 | 97.020 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 0.0 | 597 |
| MS.gene09650.t1 | MTR_5g014430 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 592 |
| MS.gene09650.t1 | MTR_5g014420 | 82.692 | 52 | 6 | 2 | 306 | 354 | 19 | 70 | 8.28e-21 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09650.t1 | AT2G35260 | 66.429 | 280 | 78 | 6 | 22 | 292 | 30 | 302 | 1.62e-118 | 348 |
| MS.gene09650.t1 | AT4G17840 | 75.490 | 204 | 50 | 0 | 89 | 292 | 139 | 342 | 1.53e-106 | 319 |
Find 76 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGTTTCAGGGATTTA+TGG | 0.164753 | 5.2:-6392327 | MS.gene09650:intron |
| CTATGGCATGTCCCCTTTGC+AGG | 0.237654 | 5.2:-6391621 | MS.gene09650:intron |
| CTTCTACAGGGCTGCAGTTC+AGG | 0.247355 | 5.2:-6391466 | MS.gene09650:intron |
| TGCTGCTGACTTTCCTGTTT+GGG | 0.252831 | 5.2:-6392646 | MS.gene09650:CDS |
| ATATGCAGTTCCTCCAATTA+TGG | 0.280024 | 5.2:-6392205 | MS.gene09650:CDS |
| GTGCTGCTGACTTTCCTGTT+TGG | 0.306301 | 5.2:-6392647 | MS.gene09650:CDS |
| GTACTTACAGCTGTCCTTAC+TGG | 0.313443 | 5.2:-6390808 | MS.gene09650:CDS |
| GATGCTATTGTTCAAGGGCT+TGG | 0.328172 | 5.2:-6392228 | MS.gene09650:CDS |
| TTACTGGAATTGACTCTCTT+GGG | 0.331878 | 5.2:-6392269 | MS.gene09650:CDS |
| TGTCTCACCTCTGTCATCTA+TGG | 0.342156 | 5.2:+6392743 | None:intergenic |
| TGTTCGAGGAATGGCGTCTT+TGG | 0.346224 | 5.2:-6391128 | MS.gene09650:intron |
| GGAAGGCTTTGCTGCAAGAT+TGG | 0.366923 | 5.2:-6388981 | MS.gene09650:CDS |
| ATGTAGAGGATGAAGAACTA+TGG | 0.367296 | 5.2:-6391652 | MS.gene09650:CDS |
| TATGGTGCTATGGCTGTTGC+GGG | 0.376737 | 5.2:-6392309 | MS.gene09650:CDS |
| ATTACTGGAATTGACTCTCT+TGG | 0.377179 | 5.2:-6392270 | MS.gene09650:CDS |
| CAATAGCATCTAATGATAGA+TGG | 0.409928 | 5.2:+6392241 | None:intergenic |
| TCATTAGATGCTATTGTTCA+AGG | 0.413215 | 5.2:-6392234 | MS.gene09650:CDS |
| CTTCAAGAGTTGTTTCTGTT+CGG | 0.420358 | 5.2:-6392800 | MS.gene09650:CDS |
| TTTATCAAATTACCTGCAAA+GGG | 0.425420 | 5.2:+6391609 | None:intergenic |
| CTAGCACGAGATTGTAAAAC+AGG | 0.433223 | 5.2:+6390625 | None:intergenic |
| AATTTCATCAAAGGAAGAAA+AGG | 0.433452 | 5.2:-6392839 | MS.gene09650:CDS |
| TACTGGTTCTCTCTATTATG+TGG | 0.435452 | 5.2:-6390791 | MS.gene09650:CDS |
| GACAGAGGTGAGACAAGAAC+CGG | 0.445196 | 5.2:-6392735 | MS.gene09650:CDS |
| GCTGCAAGTGCCTGAGCAAA+TGG | 0.445585 | 5.2:+6390832 | None:intergenic |
| TGCTGCAAGTTCGGTGGGAG+AGG | 0.446375 | 5.2:-6391493 | MS.gene09650:CDS |
| TGGGAGAGGAGCTCTTCTAC+AGG | 0.448169 | 5.2:-6391479 | MS.gene09650:CDS |
| ATCTCTAATGGCACGGGCAT+AGG | 0.451890 | 5.2:+6391673 | None:intergenic |
| ACCATTTGTTCCATTTGCTC+AGG | 0.457763 | 5.2:-6390842 | MS.gene09650:CDS |
| TGAGAGAGTGAAGTTGAAGA+AGG | 0.458614 | 5.2:+6392879 | None:intergenic |
| TTCATCCTCTACATCTCTAA+TGG | 0.465534 | 5.2:+6391661 | None:intergenic |
| AGTGAAGTTGAAGAAGGGTT+TGG | 0.467254 | 5.2:+6392885 | None:intergenic |
| ACTGATGGTTGCTGCAAGTT+CGG | 0.469127 | 5.2:-6391502 | MS.gene09650:CDS |
| GTTCACTACACCTGCAGCTA+TGG | 0.474623 | 5.2:-6392712 | MS.gene09650:CDS |
| AAAGCTTCTGCAGAGAGAAC+TGG | 0.475828 | 5.2:-6392771 | MS.gene09650:CDS |
| TTATGGTGCTATGGCTGTTG+CGG | 0.483548 | 5.2:-6392310 | MS.gene09650:CDS |
| TCTCTAATGGCACGGGCATA+GGG | 0.483690 | 5.2:+6391674 | None:intergenic |
| GAGAGAGTGAAGTTGAAGAA+GGG | 0.488119 | 5.2:+6392880 | None:intergenic |
| TTTCCTGTTTGGGAAAAGAT+TGG | 0.488590 | 5.2:-6392636 | MS.gene09650:CDS |
| TTCAGGGATTTATGGTGCTA+TGG | 0.492125 | 5.2:-6392319 | MS.gene09650:intron |
| GCCTGAGCAAATGGAACAAA+TGG | 0.495910 | 5.2:+6390841 | None:intergenic |
| TAATTTACAGTTTATACTGA+TGG | 0.502909 | 5.2:-6391517 | MS.gene09650:intron |
| TACTGGAATTGACTCTCTTG+GGG | 0.509127 | 5.2:-6392268 | MS.gene09650:CDS |
| CATTAGATGCTATTGTTCAA+GGG | 0.510033 | 5.2:-6392233 | MS.gene09650:CDS |
| TTGGTGTTAGTGTTAGAGAA+AGG | 0.510398 | 5.2:+6392904 | None:intergenic |
| ATTTCATCAAAGGAAGAAAA+GGG | 0.510946 | 5.2:-6392838 | MS.gene09650:CDS |
| CTCTACATCTCTAATGGCAC+GGG | 0.530651 | 5.2:+6391667 | None:intergenic |
| TATGTGGCTGCCTCTCCTAA+AGG | 0.540575 | 5.2:-6390775 | MS.gene09650:intron |
| GTTAGACTCAGCTATGGAAT+CGG | 0.541683 | 5.2:-6392606 | MS.gene09650:intron |
| ACAGGTGCAACAATATAAGT+AGG | 0.544789 | 5.2:+6390643 | None:intergenic |
| CTAATCATGAGATCATCAAA+TGG | 0.553935 | 5.2:-6388915 | MS.gene09650:CDS |
| AGCTGCAGGTGTAGTGAACC+CGG | 0.554325 | 5.2:+6392716 | None:intergenic |
| AAAAGAAGAGCCATAATTGG+AGG | 0.560506 | 5.2:+6392195 | None:intergenic |
| CATAATAGAGAGAACCAGTA+AGG | 0.561668 | 5.2:+6390794 | None:intergenic |
| CCTCTACATCTCTAATGGCA+CGG | 0.562261 | 5.2:+6391666 | None:intergenic |
| TATACAAGATGTTCGAGGAA+TGG | 0.565433 | 5.2:-6391137 | MS.gene09650:CDS |
| GTGGTGACTTCCATAGCTGC+AGG | 0.567391 | 5.2:+6392702 | None:intergenic |
| GATGGTTGCTGCAAGTTCGG+TGG | 0.571035 | 5.2:-6391499 | MS.gene09650:CDS |
| CGTGGTTTCAATGATGCTGC+TGG | 0.572740 | 5.2:-6392669 | MS.gene09650:CDS |
| ACTGGAATTGACTCTCTTGG+GGG | 0.580200 | 5.2:-6392267 | MS.gene09650:CDS |
| CTCATGATTAGCTTGATACA+TGG | 0.581082 | 5.2:+6388927 | None:intergenic |
| AATCTTATACAAGATGTTCG+AGG | 0.582456 | 5.2:-6391142 | MS.gene09650:CDS |
| AGCTATGTGAATTTCATCAA+AGG | 0.595654 | 5.2:-6392848 | MS.gene09650:CDS |
| CCGTGCCATTAGAGATGTAG+AGG | 0.596524 | 5.2:-6391666 | MS.gene09650:CDS |
| GGGAGAGGAGCTCTTCTACA+GGG | 0.602260 | 5.2:-6391478 | MS.gene09650:CDS |
| AGTTCAGTGAGACAATTTCG+TGG | 0.604021 | 5.2:-6388958 | MS.gene09650:CDS |
| ATGGTTGCTGCAAGTTCGGT+GGG | 0.610676 | 5.2:-6391498 | MS.gene09650:CDS |
| GCTGTTGTTAGACTCAGCTA+TGG | 0.613019 | 5.2:-6392612 | MS.gene09650:CDS |
| CAGCAGCATCATTGAAACCA+CGG | 0.669168 | 5.2:+6392670 | None:intergenic |
| ACAGAGGTGAGACAAGAACC+GGG | 0.671283 | 5.2:-6392734 | MS.gene09650:CDS |
| ATTGAAACCACGGTTGAATG+TGG | 0.675695 | 5.2:+6392680 | None:intergenic |
| GTCACCACCACATTCAACCG+TGG | 0.675824 | 5.2:-6392687 | MS.gene09650:CDS |
| TGAGCAAATGGAACAAATGG+TGG | 0.702641 | 5.2:+6390844 | None:intergenic |
| TTATCAAATTACCTGCAAAG+GGG | 0.706347 | 5.2:+6391610 | None:intergenic |
| ATGGTGCTATGGCTGTTGCG+GGG | 0.715398 | 5.2:-6392308 | MS.gene09650:CDS |
| GGTGATACCATAGATGACAG+AGG | 0.725756 | 5.2:-6392750 | MS.gene09650:CDS |
| GAAACCACGGTTGAATGTGG+TGG | 0.735030 | 5.2:+6392683 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAAAACGTAATTAAA+GGG | + | chr5.2:6390893-6390912 | None:intergenic | 10.0% |
| !! | AATAAAACATAAAGTCAAAT+TGG | + | chr5.2:6389902-6389921 | None:intergenic | 15.0% |
| !! | ATTAATTAAATCAATGTCAA+TGG | + | chr5.2:6390282-6390301 | None:intergenic | 15.0% |
| !! | ATTTATAATTTGAATTCTAC+AGG | - | chr5.2:6390624-6390643 | MS.gene09650:CDS | 15.0% |
| !! | CATATACTTTAGTATAAAAA+AGG | + | chr5.2:6389669-6389688 | None:intergenic | 15.0% |
| !! | GTAATATAAAACGTAATTAA+AGG | + | chr5.2:6390894-6390913 | None:intergenic | 15.0% |
| !! | TTTATAATTTGAATTCTACA+GGG | - | chr5.2:6390625-6390644 | MS.gene09650:CDS | 15.0% |
| !! | TTTCAAAAGATAAAGTAAAT+AGG | + | chr5.2:6391913-6391932 | None:intergenic | 15.0% |
| !!! | AATTTAGTTTTGTGAAAAAA+AGG | - | chr5.2:6390549-6390568 | MS.gene09650:intron | 15.0% |
| !!! | GAAATTTTGATTTTGTTTAT+TGG | - | chr5.2:6389415-6389434 | MS.gene09650:intron | 15.0% |
| !!! | GGAAATTTTTGTATTAAATA+GGG | - | chr5.2:6390027-6390046 | MS.gene09650:intron | 15.0% |
| !!! | TACTGTTTTGTAATAAAAAT+TGG | - | chr5.2:6392332-6392351 | MS.gene09650:intron | 15.0% |
| !! | AAAATGAATATTTGCTTTGT+TGG | - | chr5.2:6389298-6389317 | MS.gene09650:intron | 20.0% |
| !! | ATAAAGTAAATAGGATTACT+TGG | + | chr5.2:6391904-6391923 | None:intergenic | 20.0% |
| !! | ATATATATGTAATCTGATAC+AGG | + | chr5.2:6390428-6390447 | None:intergenic | 20.0% |
| !! | ATCAATTAGAACAGATATAA+TGG | + | chr5.2:6391287-6391306 | None:intergenic | 20.0% |
| !! | ATCTTTGATAAAGTTATAAG+TGG | + | chr5.2:6392461-6392480 | None:intergenic | 20.0% |
| !! | ATTTACTCAACTGTTATATT+GGG | - | chr5.2:6392045-6392064 | MS.gene09650:intron | 20.0% |
| !! | TAAATTATTAAGCTCAAGTA+TGG | + | chr5.2:6390609-6390628 | None:intergenic | 20.0% |
| !! | TAATGGGATATAATATTCAA+CGG | + | chr5.2:6391270-6391289 | None:intergenic | 20.0% |
| !! | TAATTTACAGTTTATACTGA+TGG | - | chr5.2:6390304-6390323 | MS.gene09650:intron | 20.0% |
| !! | TACTAAAGTATATGATGATA+AGG | - | chr5.2:6389675-6389694 | MS.gene09650:intron | 20.0% |
| !! | TATAAGAAAAAGTTACCTTT+AGG | + | chr5.2:6391064-6391083 | None:intergenic | 20.0% |
| !! | TCAATTAGAACAGATATAAT+GGG | + | chr5.2:6391286-6391305 | None:intergenic | 20.0% |
| !! | TTAAAGCAAAGATTGTAATT+GGG | + | chr5.2:6392407-6392426 | None:intergenic | 20.0% |
| !! | TTATAATTTGAATTCTACAG+GGG | - | chr5.2:6390626-6390645 | MS.gene09650:CDS | 20.0% |
| !! | TTCAGCAAAAATATACAAAA+GGG | + | chr5.2:6389279-6389298 | None:intergenic | 20.0% |
| !! | TTTCAGCAAAAATATACAAA+AGG | + | chr5.2:6389280-6389299 | None:intergenic | 20.0% |
| !!! | AAAATCAAAATTTCCCATTT+TGG | + | chr5.2:6389409-6389428 | None:intergenic | 20.0% |
| !!! | AACTAATTTGTGTTTATGTT+TGG | - | chr5.2:6391970-6391989 | MS.gene09650:intron | 20.0% |
| !!! | AATCTAACTTGTGATTTATA+CGG | - | chr5.2:6390932-6390951 | MS.gene09650:intron | 20.0% |
| !!! | AGTTTTGTCTAAAATTTCTA+AGG | - | chr5.2:6391942-6391961 | MS.gene09650:intron | 20.0% |
| !!! | ATGTTTTTCTTTTTCCAAAA+TGG | - | chr5.2:6389392-6389411 | MS.gene09650:intron | 20.0% |
| !!! | GAATTCAATTGTTATTTGTA+TGG | - | chr5.2:6389449-6389468 | MS.gene09650:intron | 20.0% |
| !!! | GATGAATTTTATATACTTCA+AGG | + | chr5.2:6391463-6391482 | None:intergenic | 20.0% |
| !!! | GGGAAATTTTTGTATTAAAT+AGG | - | chr5.2:6390026-6390045 | MS.gene09650:intron | 20.0% |
| !!! | TAATAAATTGCTTTGTTTCA+GGG | - | chr5.2:6389486-6389505 | MS.gene09650:intron | 20.0% |
| !!! | TATTAATTTTACACAGCTTT+TGG | + | chr5.2:6392364-6392383 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTTTTCCAAAAT+GGG | - | chr5.2:6389393-6389412 | MS.gene09650:intron | 20.0% |
| !!! | TTAATAAATTGCTTTGTTTC+AGG | - | chr5.2:6389485-6389504 | MS.gene09650:intron | 20.0% |
| !!! | TTTAAAGCAAAGATTGTAAT+TGG | + | chr5.2:6392408-6392427 | None:intergenic | 20.0% |
| ! | AAATATGAATCTTGATTGTG+TGG | - | chr5.2:6390449-6390468 | MS.gene09650:intron | 25.0% |
| ! | AAATCTTCATACTCTTAGTT+TGG | - | chr5.2:6392656-6392675 | MS.gene09650:CDS | 25.0% |
| ! | AATCTTCATACTCTTAGTTT+GGG | - | chr5.2:6392657-6392676 | MS.gene09650:CDS | 25.0% |
| ! | AATTTCATCAAAGGAAGAAA+AGG | - | chr5.2:6388982-6389001 | MS.gene09650:CDS | 25.0% |
| ! | ATAAAAAGAAGAGCCATAAT+TGG | + | chr5.2:6389632-6389651 | None:intergenic | 25.0% |
| ! | ATATACTTTAGTAAAGTGAC+AGG | - | chr5.2:6391539-6391558 | MS.gene09650:intron | 25.0% |
| ! | ATCTCAACTTAACCAAAATA+TGG | + | chr5.2:6389746-6389765 | None:intergenic | 25.0% |
| ! | ATTTCATCAAAGGAAGAAAA+GGG | - | chr5.2:6388983-6389002 | MS.gene09650:CDS | 25.0% |
| ! | GATTTACTCAACTGTTATAT+TGG | - | chr5.2:6392044-6392063 | MS.gene09650:intron | 25.0% |
| ! | TAATTAAACGCTTATAGCAT+AGG | + | chr5.2:6389956-6389975 | None:intergenic | 25.0% |
| ! | TACTTTAGGTACTAAATTGA+TGG | - | chr5.2:6391627-6391646 | MS.gene09650:CDS | 25.0% |
| ! | TAGCATGCGATATATTTATT+GGG | - | chr5.2:6390006-6390025 | MS.gene09650:intron | 25.0% |
| ! | TATAAAACGTAATTAAAGGG+AGG | + | chr5.2:6390890-6390909 | None:intergenic | 25.0% |
| ! | TATAATTTGAATTCTACAGG+GGG | - | chr5.2:6390627-6390646 | MS.gene09650:CDS | 25.0% |
| ! | TCAAATAAGTCAATCAAAAC+AGG | + | chr5.2:6389779-6389798 | None:intergenic | 25.0% |
| ! | TCATCAACATGGTTATTATT+AGG | - | chr5.2:6390104-6390123 | MS.gene09650:intron | 25.0% |
| ! | TCTCAACTTAACCAAAATAT+GGG | + | chr5.2:6389745-6389764 | None:intergenic | 25.0% |
| ! | TGAGAAGAAAAAATGTAAAG+CGG | + | chr5.2:6391089-6391108 | None:intergenic | 25.0% |
| ! | TGTAGAAGAAAATCAATAGT+TGG | - | chr5.2:6392485-6392504 | MS.gene09650:intron | 25.0% |
| ! | TTAGCATGCGATATATTTAT+TGG | - | chr5.2:6390005-6390024 | MS.gene09650:intron | 25.0% |
| ! | TTTATCAAATTACCTGCAAA+GGG | + | chr5.2:6390215-6390234 | None:intergenic | 25.0% |
| !! | TGCTAGCTTAATAATCTTAA+TGG | - | chr5.2:6390579-6390598 | MS.gene09650:intron | 25.0% |
| !! | TGTCTAAAATTTCTAAGGAA+TGG | - | chr5.2:6391947-6391966 | MS.gene09650:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr5.2:6389973-6389992 | MS.gene09650:intron | 25.0% |
| !! | TTTTATCAAATTACCTGCAA+AGG | + | chr5.2:6390216-6390235 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTTGTGTTAGAA+GGG | - | chr5.2:6390737-6390756 | MS.gene09650:intron | 25.0% |
| !!! | AGTTTTATATGTTCGATTAC+TGG | - | chr5.2:6389536-6389555 | MS.gene09650:intron | 25.0% |
| !!! | CAAAGTTTTGATTACATTAC+AGG | - | chr5.2:6392281-6392300 | MS.gene09650:CDS | 25.0% |
| !!! | GAACTTTTTGGAATCAATTT+TGG | - | chr5.2:6389241-6389260 | MS.gene09650:intron | 25.0% |
| !!! | TTAGTTTTGTGAAAAAAAGG+AGG | - | chr5.2:6390552-6390571 | MS.gene09650:intron | 25.0% |
| !!! | TTGTAGCTTTTTAGCTAATT+GGG | - | chr5.2:6389341-6389360 | MS.gene09650:intron | 25.0% |
| !!! | TTTGTAGCTTTTTAGCTAAT+TGG | - | chr5.2:6389340-6389359 | MS.gene09650:intron | 25.0% |
| AAACCAAAAATAAGTGGATC+AGG | + | chr5.2:6391792-6391811 | None:intergenic | 30.0% | |
| AATCTTATACAAGATGTTCG+AGG | - | chr5.2:6390679-6390698 | MS.gene09650:intron | 30.0% | |
| AGCTATGTGAATTTCATCAA+AGG | - | chr5.2:6388973-6388992 | MS.gene09650:CDS | 30.0% | |
| AGTAAATGTCTATCCAAAGT+AGG | - | chr5.2:6392511-6392530 | MS.gene09650:intron | 30.0% | |
| ATATCGCATGCTAAAGATTA+AGG | + | chr5.2:6389999-6390018 | None:intergenic | 30.0% | |
| CAATAGCATCTAATGATAGA+TGG | + | chr5.2:6389583-6389602 | None:intergenic | 30.0% | |
| CATTAGATGCTATTGTTCAA+GGG | - | chr5.2:6389588-6389607 | MS.gene09650:intron | 30.0% | |
| CATTCTAGTGCTAAAAACTA+AGG | - | chr5.2:6392571-6392590 | MS.gene09650:intron | 30.0% | |
| CTAATGACTGTTATGTCAAA+AGG | + | chr5.2:6390792-6390811 | None:intergenic | 30.0% | |
| CTAATTGGGTCAAACAAAAA+AGG | - | chr5.2:6389355-6389374 | MS.gene09650:intron | 30.0% | |
| CTTCTAACACAAGAAAGAAA+AGG | + | chr5.2:6390738-6390757 | None:intergenic | 30.0% | |
| GAGAAGAAAAAATGTAAAGC+GGG | + | chr5.2:6391088-6391107 | None:intergenic | 30.0% | |
| GATTTGAAAAAGCTGTTTGA+AGG | - | chr5.2:6391226-6391245 | MS.gene09650:intron | 30.0% | |
| GGGACAAATCAAATATATGA+CGG | - | chr5.2:6391510-6391529 | MS.gene09650:CDS | 30.0% | |
| GGTTTATTCAATAGTTTCTC+AGG | - | chr5.2:6391648-6391667 | MS.gene09650:CDS | 30.0% | |
| GTAAATGTCTATCCAAAGTA+GGG | - | chr5.2:6392512-6392531 | MS.gene09650:intron | 30.0% | |
| GTCAAAGCAACAAAAATGTT+TGG | - | chr5.2:6392696-6392715 | MS.gene09650:CDS | 30.0% | |
| GTTATTTGTATGGTGCAATT+TGG | - | chr5.2:6389459-6389478 | MS.gene09650:intron | 30.0% | |
| TAAATCCCATGTGTGATAAT+CGG | + | chr5.2:6392030-6392049 | None:intergenic | 30.0% | |
| TAAGAGATCTCTCACTTTAA+CGG | - | chr5.2:6390386-6390405 | MS.gene09650:intron | 30.0% | |
| TACATTACATTGAAGCTATC+AGG | - | chr5.2:6392431-6392450 | MS.gene09650:intron | 30.0% | |
| TATATGTAATCTGATACAGG+TGG | + | chr5.2:6390425-6390444 | None:intergenic | 30.0% | |
| TCATTAGATGCTATTGTTCA+AGG | - | chr5.2:6389587-6389606 | MS.gene09650:intron | 30.0% | |
| TCCCTAACATCTTAATAGTA+GGG | + | chr5.2:6391494-6391513 | None:intergenic | 30.0% | |
| TCCCTACTATTAAGATGTTA+GGG | - | chr5.2:6391490-6391509 | MS.gene09650:CDS | 30.0% | |
| TGGGTTAAAATCTTCATCAA+GGG | - | chr5.2:6391322-6391341 | MS.gene09650:intron | 30.0% | |
| TTATCAAATTACCTGCAAAG+GGG | + | chr5.2:6390214-6390233 | None:intergenic | 30.0% | |
| TTGATGAAAGCTCAATTCAT+GGG | + | chr5.2:6390091-6390110 | None:intergenic | 30.0% | |
| ! | AGAGCATTTCAAAATCTAGT+TGG | + | chr5.2:6392151-6392170 | None:intergenic | 30.0% |
| ! | ATATACTTTAGGGACCAAAT+TGG | + | chr5.2:6391424-6391443 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCTTGTGTTAGA+AGG | - | chr5.2:6390736-6390755 | MS.gene09650:intron | 30.0% |
| ! | GTGCTAAAAACTAAGGTATT+CGG | - | chr5.2:6392578-6392597 | MS.gene09650:intron | 30.0% |
| ! | TTCTTATGATGACCTCATTT+TGG | - | chr5.2:6392542-6392561 | MS.gene09650:intron | 30.0% |
| ! | TTGATAAAACTTGCTTGCTT+TGG | - | chr5.2:6390227-6390246 | MS.gene09650:intron | 30.0% |
| ! | TTTCGTTCAATCCCATATTT+TGG | - | chr5.2:6389731-6389750 | MS.gene09650:intron | 30.0% |
| !! | TAACAGTCATTAGTTCTAGT+CGG | - | chr5.2:6390799-6390818 | MS.gene09650:CDS | 30.0% |
| !! | TTTCTTCTGATTTGAGTTGT+TGG | + | chr5.2:6392122-6392141 | None:intergenic | 30.0% |
| !!! | GAACTATGGAGTTTTTTCTA+TGG | - | chr5.2:6390183-6390202 | MS.gene09650:intron | 30.0% |
| AAAAATCTATTCCCCACTTC+TGG | - | chr5.2:6391841-6391860 | MS.gene09650:intron | 35.0% | |
| AAAAGAAGAGCCATAATTGG+AGG | + | chr5.2:6389629-6389648 | None:intergenic | 35.0% | |
| AACCTATCCAATAGAGCTTA+CGG | + | chr5.2:6389851-6389870 | None:intergenic | 35.0% | |
| AAGAGATCTCTCACTTTAAC+GGG | - | chr5.2:6390387-6390406 | MS.gene09650:intron | 35.0% | |
| AAGCTCTATTGGATAGGTTA+TGG | - | chr5.2:6389852-6389871 | MS.gene09650:intron | 35.0% | |
| ACAGGTGCAACAATATAAGT+AGG | + | chr5.2:6391181-6391200 | None:intergenic | 35.0% | |
| ATATGCAGTTCCTCCAATTA+TGG | - | chr5.2:6389616-6389635 | MS.gene09650:intron | 35.0% | |
| ATGTAGAGGATGAAGAACTA+TGG | - | chr5.2:6390169-6390188 | MS.gene09650:intron | 35.0% | |
| CATAATAGAGAGAACCAGTA+AGG | + | chr5.2:6391030-6391049 | None:intergenic | 35.0% | |
| CATTCGAAAACGATGAAACA+TGG | + | chr5.2:6391713-6391732 | None:intergenic | 35.0% | |
| CTAAAGATTAAGGCCATGTT+TGG | + | chr5.2:6389989-6390008 | None:intergenic | 35.0% | |
| CTTATTTCCGTAAGCTCTAT+TGG | - | chr5.2:6389841-6389860 | MS.gene09650:intron | 35.0% | |
| GAATTGAGCTTTCATCAACA+TGG | - | chr5.2:6390093-6390112 | MS.gene09650:intron | 35.0% | |
| GATGGTAATCATTAATCAGC+TGG | + | chr5.2:6391139-6391158 | None:intergenic | 35.0% | |
| GGGATATAATATTCAACGGT+AGG | + | chr5.2:6391266-6391285 | None:intergenic | 35.0% | |
| GTCCCTAACATCTTAATAGT+AGG | + | chr5.2:6391495-6391514 | None:intergenic | 35.0% | |
| GTCCCTACTATTAAGATGTT+AGG | - | chr5.2:6391489-6391508 | MS.gene09650:CDS | 35.0% | |
| GTGACGGTTCAGAAATAAAA+AGG | - | chr5.2:6391732-6391751 | MS.gene09650:intron | 35.0% | |
| TATACAAGATGTTCGAGGAA+TGG | - | chr5.2:6390684-6390703 | MS.gene09650:intron | 35.0% | |
| TATACGGTAATATGCAGACA+GGG | - | chr5.2:6390948-6390967 | MS.gene09650:intron | 35.0% | |
| TCAACTGTTATATTGGGACA+TGG | - | chr5.2:6392051-6392070 | MS.gene09650:intron | 35.0% | |
| TCAATGGTTGCACTAGATTA+AGG | + | chr5.2:6390266-6390285 | None:intergenic | 35.0% | |
| TCTGAAAGAGAGAAAAGAGA+TGG | + | chr5.2:6391157-6391176 | None:intergenic | 35.0% | |
| TGAAGAGAGATCGATACTTT+AGG | - | chr5.2:6391613-6391632 | MS.gene09650:intron | 35.0% | |
| TGCTGCAAACCAAAAATAAG+TGG | + | chr5.2:6391798-6391817 | None:intergenic | 35.0% | |
| TTATACGGTAATATGCAGAC+AGG | - | chr5.2:6390947-6390966 | MS.gene09650:intron | 35.0% | |
| TTATATTGGGACATGGTCTT+TGG | - | chr5.2:6392058-6392077 | MS.gene09650:intron | 35.0% | |
| TTCATCCTCTACATCTCTAA+TGG | + | chr5.2:6390163-6390182 | None:intergenic | 35.0% | |
| TTTCCTGTTTGGGAAAAGAT+TGG | - | chr5.2:6389185-6389204 | MS.gene09650:intron | 35.0% | |
| TTTCTCCGATTATCACACAT+GGG | - | chr5.2:6392022-6392041 | MS.gene09650:intron | 35.0% | |
| ! | ATTACTGGAATTGACTCTCT+TGG | - | chr5.2:6389551-6389570 | MS.gene09650:intron | 35.0% |
| ! | CTAAAAACTAAGGTATTCGG+TGG | - | chr5.2:6392581-6392600 | MS.gene09650:intron | 35.0% |
| ! | CTGTAGTATTTTGTGGAATC+TGG | + | chr5.2:6392793-6392812 | None:intergenic | 35.0% |
| ! | GAAAAAGTTACCTTTAGGAG+AGG | + | chr5.2:6391059-6391078 | None:intergenic | 35.0% |
| ! | GTGGGTTAAAATCTTCATCA+AGG | - | chr5.2:6391321-6391340 | MS.gene09650:intron | 35.0% |
| ! | GTTGATGAAAGCTCAATTCA+TGG | + | chr5.2:6390092-6390111 | None:intergenic | 35.0% |
| ! | TAGTATTTTGTGGAATCTGG+AGG | + | chr5.2:6392790-6392809 | None:intergenic | 35.0% |
| ! | TCATCTGCTGTAGTATTTTG+TGG | + | chr5.2:6392800-6392819 | None:intergenic | 35.0% |
| ! | TGATAACGTTCTAGTCAAGT+GGG | - | chr5.2:6391303-6391322 | MS.gene09650:intron | 35.0% |
| ! | TTACTGGAATTGACTCTCTT+GGG | - | chr5.2:6389552-6389571 | MS.gene09650:intron | 35.0% |
| ! | TTCATCGTTTTCGAATGTGA+CGG | - | chr5.2:6391716-6391735 | MS.gene09650:intron | 35.0% |
| !! | ACACAGAAAGTACTCATGAT+TGG | + | chr5.2:6390497-6390516 | None:intergenic | 35.0% |
| !! | ATGATGACCTCATTTTGGTA+GGG | - | chr5.2:6392547-6392566 | MS.gene09650:intron | 35.0% |
| !! | CAACCTGATCCACTTATTTT+TGG | - | chr5.2:6391786-6391805 | MS.gene09650:intron | 35.0% |
| !! | CTGGCTGATATATTTTTACG+AGG | - | chr5.2:6390652-6390671 | MS.gene09650:intron | 35.0% |
| !! | CTTCAAGAGTTGTTTCTGTT+CGG | - | chr5.2:6389021-6389040 | MS.gene09650:CDS | 35.0% |
| !! | GGTTAAGTTGAGATGCATTT+AGG | - | chr5.2:6389752-6389771 | MS.gene09650:intron | 35.0% |
| !! | TACTGGTTCTCTCTATTATG+TGG | - | chr5.2:6391030-6391049 | MS.gene09650:intron | 35.0% |
| !! | TATGATGACCTCATTTTGGT+AGG | - | chr5.2:6392546-6392565 | MS.gene09650:intron | 35.0% |
| !! | TGCTCTACAAAGACTGATTT+TGG | - | chr5.2:6392165-6392184 | MS.gene09650:intron | 35.0% |
| !! | TGCTTTGTTTCAGGGATTTA+TGG | - | chr5.2:6389494-6389513 | MS.gene09650:intron | 35.0% |
| !! | TTGATAACGTTCTAGTCAAG+TGG | - | chr5.2:6391302-6391321 | MS.gene09650:intron | 35.0% |
| !! | TTGGTGTTAGTGTTAGAGAA+AGG | + | chr5.2:6388920-6388939 | None:intergenic | 35.0% |
| !!! | CTTATTTTTGGTTTGCAGCA+TGG | - | chr5.2:6391798-6391817 | MS.gene09650:intron | 35.0% |
| AATCAGCTGGAGAACAAACT+AGG | + | chr5.2:6391126-6391145 | None:intergenic | 40.0% | |
| ACCATTTGTTCCATTTGCTC+AGG | - | chr5.2:6390979-6390998 | MS.gene09650:intron | 40.0% | |
| AGAATGACCCTACCAAAATG+AGG | + | chr5.2:6392557-6392576 | None:intergenic | 40.0% | |
| AGCTCAATTCATGGGAACAA+AGG | + | chr5.2:6390083-6390102 | None:intergenic | 40.0% | |
| AGTGAAGTTGAAGAAGGGTT+TGG | + | chr5.2:6388939-6388958 | None:intergenic | 40.0% | |
| AGTTCAGTGAGACAATTTCG+TGG | - | chr5.2:6392863-6392882 | MS.gene09650:CDS | 40.0% | |
| ATACGGTAATATGCAGACAG+GGG | - | chr5.2:6390949-6390968 | MS.gene09650:intron | 40.0% | |
| ATCACAAGCAGAAAATGCAC+AGG | + | chr5.2:6391762-6391781 | None:intergenic | 40.0% | |
| ATTGAAACCACGGTTGAATG+TGG | + | chr5.2:6389144-6389163 | None:intergenic | 40.0% | |
| CAGTATCACTCTCTCCAATT+TGG | - | chr5.2:6391407-6391426 | MS.gene09650:intron | 40.0% | |
| CTAGCACGAGATTGTAAAAC+AGG | + | chr5.2:6391199-6391218 | None:intergenic | 40.0% | |
| CTTACCCTCTTTAATGTCCT+TGG | - | chr5.2:6390864-6390883 | MS.gene09650:intron | 40.0% | |
| CTTTCTCCGATTATCACACA+TGG | - | chr5.2:6392021-6392040 | MS.gene09650:intron | 40.0% | |
| GAGAGAGTGAAGTTGAAGAA+GGG | + | chr5.2:6388944-6388963 | None:intergenic | 40.0% | |
| GTTAGACTCAGCTATGGAAT+CGG | - | chr5.2:6389215-6389234 | MS.gene09650:intron | 40.0% | |
| TGAGAGAGTGAAGTTGAAGA+AGG | + | chr5.2:6388945-6388964 | None:intergenic | 40.0% | |
| TGAGCAAATGGAACAAATGG+TGG | + | chr5.2:6390980-6390999 | None:intergenic | 40.0% | |
| TTCCGTAAGCTCTATTGGAT+AGG | - | chr5.2:6389846-6389865 | MS.gene09650:intron | 40.0% | |
| TTGCAGCATGGTATGAGAAA+AGG | - | chr5.2:6391810-6391829 | MS.gene09650:intron | 40.0% | |
| TTGGAGAGAGTGATACTGTA+TGG | + | chr5.2:6391405-6391424 | None:intergenic | 40.0% | |
| TTTGGAAGATACACGACCAT+CGG | - | chr5.2:6392076-6392095 | MS.gene09650:intron | 40.0% | |
| ! | TACTGGAATTGACTCTCTTG+GGG | - | chr5.2:6389553-6389572 | MS.gene09650:intron | 40.0% |
| ! | TGGAATCGGTGAGAACTTTT+TGG | - | chr5.2:6389229-6389248 | MS.gene09650:intron | 40.0% |
| ! | TTCAGGGATTTATGGTGCTA+TGG | - | chr5.2:6389502-6389521 | MS.gene09650:intron | 40.0% |
| !! | CAGAAAGTACTCATGATTGG+AGG | + | chr5.2:6390494-6390513 | None:intergenic | 40.0% |
| AAACAACCCTCTCGACTTTC+AGG | - | chr5.2:6390824-6390843 | MS.gene09650:CDS | 45.0% | |
| AAAGCTTCTGCAGAGAGAAC+TGG | - | chr5.2:6389050-6389069 | MS.gene09650:CDS | 45.0% | |
| AACAACCCTCTCGACTTTCA+GGG | - | chr5.2:6390825-6390844 | MS.gene09650:CDS | 45.0% | |
| AAGAACCTCACACCCTACTT+TGG | + | chr5.2:6392527-6392546 | None:intergenic | 45.0% | |
| ACGTAATTAAAGGGAGGCCA+AGG | + | chr5.2:6390884-6390903 | None:intergenic | 45.0% | |
| ACTGATGGTTGCTGCAAGTT+CGG | - | chr5.2:6390319-6390338 | MS.gene09650:intron | 45.0% | |
| ATCTATTCCCCACTTCTGGA+AGG | - | chr5.2:6391845-6391864 | MS.gene09650:intron | 45.0% | |
| CAATAGTCCTTCCAGAAGTG+GGG | + | chr5.2:6391855-6391874 | None:intergenic | 45.0% | |
| CAGCAGCATCATTGAAACCA+CGG | + | chr5.2:6389154-6389173 | None:intergenic | 45.0% | |
| CCAATAGTCCTTCCAGAAGT+GGG | + | chr5.2:6391856-6391875 | None:intergenic | 45.0% | |
| CCTCTACATCTCTAATGGCA+CGG | + | chr5.2:6390158-6390177 | None:intergenic | 45.0% | |
| CTCTACATCTCTAATGGCAC+GGG | + | chr5.2:6390157-6390176 | None:intergenic | 45.0% | |
| GAGGCCAAGGACATTAAAGA+GGG | + | chr5.2:6390871-6390890 | None:intergenic | 45.0% | |
| GATGCTATTGTTCAAGGGCT+TGG | - | chr5.2:6389593-6389612 | MS.gene09650:intron | 45.0% | |
| GCAACCTTACTATTGCACCA+AGG | + | chr5.2:6390767-6390786 | None:intergenic | 45.0% | |
| GCCTGAGCAAATGGAACAAA+TGG | + | chr5.2:6390983-6391002 | None:intergenic | 45.0% | |
| GCTGTTGTTAGACTCAGCTA+TGG | - | chr5.2:6389209-6389228 | MS.gene09650:intron | 45.0% | |
| GGTGATACCATAGATGACAG+AGG | - | chr5.2:6389071-6389090 | MS.gene09650:CDS | 45.0% | |
| GTACTTACAGCTGTCCTTAC+TGG | - | chr5.2:6391013-6391032 | MS.gene09650:intron | 45.0% | |
| TCTATCCAAAGTAGGGTGTG+AGG | - | chr5.2:6392519-6392538 | MS.gene09650:intron | 45.0% | |
| TGTCTCACCTCTGTCATCTA+TGG | + | chr5.2:6389081-6389100 | None:intergenic | 45.0% | |
| ! | AAGGTATTCGGTGGCTTTCA+TGG | - | chr5.2:6392590-6392609 | MS.gene09650:intron | 45.0% |
| ! | ACTGGAATTGACTCTCTTGG+GGG | - | chr5.2:6389554-6389573 | MS.gene09650:intron | 45.0% |
| ! | GCACCAATCTTTTCCCAAAC+AGG | + | chr5.2:6389191-6389210 | None:intergenic | 45.0% |
| ! | TGAGCCTTGGTGCAATAGTA+AGG | - | chr5.2:6390760-6390779 | MS.gene09650:intron | 45.0% |
| !! | AAGCAGCGCTTTTTGTTGGA+GGG | - | chr5.2:6392819-6392838 | MS.gene09650:CDS | 45.0% |
| !! | GATGAAGCAGCGCTTTTTGT+TGG | - | chr5.2:6392815-6392834 | MS.gene09650:CDS | 45.0% |
| !! | TGCTGCTGACTTTCCTGTTT+GGG | - | chr5.2:6389175-6389194 | MS.gene09650:intron | 45.0% |
| !! | TTATGGTGCTATGGCTGTTG+CGG | - | chr5.2:6389511-6389530 | MS.gene09650:intron | 45.0% |
| !! | TATTATATTTATATACTTTA+GGG | + | chr5.2:6391434-6391453 | None:intergenic | 5.0% |
| !! | TTATTATATTTATATACTTT+AGG | + | chr5.2:6391435-6391454 | None:intergenic | 5.0% |
| ACAGAGGTGAGACAAGAACC+GGG | - | chr5.2:6389087-6389106 | MS.gene09650:intron | 50.0% | |
| ATCTCTAATGGCACGGGCAT+AGG | + | chr5.2:6390151-6390170 | None:intergenic | 50.0% | |
| ATGGTTGCTGCAAGTTCGGT+GGG | - | chr5.2:6390323-6390342 | MS.gene09650:intron | 50.0% | |
| CGTGGTTTCAATGATGCTGC+TGG | - | chr5.2:6389152-6389171 | MS.gene09650:intron | 50.0% | |
| CTTAGCCCTGAAAGTCGAGA+GGG | + | chr5.2:6390833-6390852 | None:intergenic | 50.0% | |
| CTTGGATCCACTCAAAACCG+AGG | + | chr5.2:6391886-6391905 | None:intergenic | 50.0% | |
| GAAACCACGGTTGAATGTGG+TGG | + | chr5.2:6389141-6389160 | None:intergenic | 50.0% | |
| GACAGAGGTGAGACAAGAAC+CGG | - | chr5.2:6389086-6389105 | MS.gene09650:intron | 50.0% | |
| GCCAATAGTCCTTCCAGAAG+TGG | + | chr5.2:6391857-6391876 | None:intergenic | 50.0% | |
| GGAAGGCTTTGCTGCAAGAT+TGG | - | chr5.2:6392840-6392859 | MS.gene09650:CDS | 50.0% | |
| GGAGGCCAAGGACATTAAAG+AGG | + | chr5.2:6390872-6390891 | None:intergenic | 50.0% | |
| GTTCACTACACCTGCAGCTA+TGG | - | chr5.2:6389109-6389128 | MS.gene09650:intron | 50.0% | |
| TATGTGGCTGCCTCTCCTAA+AGG | - | chr5.2:6391046-6391065 | MS.gene09650:intron | 50.0% | |
| TCTCTAATGGCACGGGCATA+GGG | + | chr5.2:6390150-6390169 | None:intergenic | 50.0% | |
| TGTGTTAGAAGGGTGAGCCT+TGG | - | chr5.2:6390747-6390766 | MS.gene09650:intron | 50.0% | |
| TGTTCGAGGAATGGCGTCTT+TGG | - | chr5.2:6390693-6390712 | MS.gene09650:intron | 50.0% | |
| ! | CCCACTTCTGGAAGGACTAT+TGG | - | chr5.2:6391853-6391872 | MS.gene09650:intron | 50.0% |
| ! | CCGTGCCATTAGAGATGTAG+AGG | - | chr5.2:6390155-6390174 | MS.gene09650:intron | 50.0% |
| ! | TTGAATTCTACAGGGGGCAC+TGG | - | chr5.2:6390633-6390652 | MS.gene09650:CDS | 50.0% |
| !! | AGCGCTTTTTGTTGGAGGGA+AGG | - | chr5.2:6392823-6392842 | MS.gene09650:CDS | 50.0% |
| !! | GAAGCAGCGCTTTTTGTTGG+AGG | - | chr5.2:6392818-6392837 | MS.gene09650:CDS | 50.0% |
| !! | GGACTATTGGCTCTCTACCT+CGG | - | chr5.2:6391866-6391885 | MS.gene09650:intron | 50.0% |
| !! | GTGCTGCTGACTTTCCTGTT+TGG | - | chr5.2:6389174-6389193 | MS.gene09650:intron | 50.0% |
| !! | TATGGTGCTATGGCTGTTGC+GGG | - | chr5.2:6389512-6389531 | MS.gene09650:intron | 50.0% |
| !!! | CTCTCTACCTCGGTTTTGAG+TGG | - | chr5.2:6391876-6391895 | MS.gene09650:intron | 50.0% |
| ACGACCATCGGCGAAGACTA+AGG | - | chr5.2:6392088-6392107 | MS.gene09650:intron | 55.0% | |
| AGCTGCAGGTGTAGTGAACC+CGG | + | chr5.2:6389108-6389127 | None:intergenic | 55.0% | |
| CCTCTCGACTTTCAGGGCTA+AGG | - | chr5.2:6390831-6390850 | MS.gene09650:CDS | 55.0% | |
| CCTTAGCCCTGAAAGTCGAG+AGG | + | chr5.2:6390834-6390853 | None:intergenic | 55.0% | |
| CTATGGCATGTCCCCTTTGC+AGG | - | chr5.2:6390200-6390219 | MS.gene09650:intron | 55.0% | |
| CTTCTACAGGGCTGCAGTTC+AGG | - | chr5.2:6390355-6390374 | MS.gene09650:intron | 55.0% | |
| GATGGTTGCTGCAAGTTCGG+TGG | - | chr5.2:6390322-6390341 | MS.gene09650:intron | 55.0% | |
| GCTGCAAGTGCCTGAGCAAA+TGG | + | chr5.2:6390992-6391011 | None:intergenic | 55.0% | |
| GGGAGAGGAGCTCTTCTACA+GGG | - | chr5.2:6390343-6390362 | MS.gene09650:intron | 55.0% | |
| GTCACCACCACATTCAACCG+TGG | - | chr5.2:6389134-6389153 | MS.gene09650:intron | 55.0% | |
| GTGGTGACTTCCATAGCTGC+AGG | + | chr5.2:6389122-6389141 | None:intergenic | 55.0% | |
| TGGGAGAGGAGCTCTTCTAC+AGG | - | chr5.2:6390342-6390361 | MS.gene09650:intron | 55.0% | |
| ! | TCTGCCTTAGTCTTCGCCGA+TGG | + | chr5.2:6392095-6392114 | None:intergenic | 55.0% |
| !! | ATGGTGCTATGGCTGTTGCG+GGG | - | chr5.2:6389513-6389532 | MS.gene09650:intron | 55.0% |
| ! | TGCTGCAAGTTCGGTGGGAG+AGG | - | chr5.2:6390328-6390347 | MS.gene09650:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 6388912 | 6392931 | 6388912 | ID=MS.gene09650 |
| chr5.2 | mRNA | 6388912 | 6392931 | 6388912 | ID=MS.gene09650.t1;Parent=MS.gene09650 |
| chr5.2 | exon | 6392607 | 6392931 | 6392607 | ID=MS.gene09650.t1.exon1;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6392607 | 6392931 | 6392607 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6392185 | 6392336 | 6392185 | ID=MS.gene09650.t1.exon2;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6392185 | 6392336 | 6392185 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6391622 | 6391717 | 6391622 | ID=MS.gene09650.t1.exon3;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6391622 | 6391717 | 6391622 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6391467 | 6391529 | 6391467 | ID=MS.gene09650.t1.exon4;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6391467 | 6391529 | 6391467 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6391129 | 6391197 | 6391129 | ID=MS.gene09650.t1.exon5;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6391129 | 6391197 | 6391129 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6390776 | 6390878 | 6390776 | ID=MS.gene09650.t1.exon6;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6390776 | 6390878 | 6390776 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6390596 | 6390667 | 6390596 | ID=MS.gene09650.t1.exon7;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6390596 | 6390667 | 6390596 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| chr5.2 | exon | 6388912 | 6389099 | 6388912 | ID=MS.gene09650.t1.exon8;Parent=MS.gene09650.t1 |
| chr5.2 | CDS | 6388912 | 6389099 | 6388912 | ID=cds.MS.gene09650.t1;Parent=MS.gene09650.t1 |
| Gene Sequence |
| Protein sequence |
