Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04938.t1 | XP_013460594.1 | 98.3 | 236 | 4 | 0 | 1 | 236 | 1 | 236 | 8.90E-129 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04938.t1 | Q8LE52 | 67.4 | 227 | 64 | 3 | 20 | 236 | 4 | 230 | 5.2e-85 | 315.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04938.t1 | Q4JR85 | 98.3 | 236 | 4 | 0 | 1 | 236 | 1 | 236 | 6.4e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04938 | MS.gene04939 | 0.978054 | 4.98E-145 | -1.69E-46 |
| MS.gene04938 | MS.gene050163 | 0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene050165 | 0.817116 | 3.90E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene050333 | 0.802993 | 4.31E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene050612 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene050675 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene050699 | 0.814504 | 1.49E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene050986 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene051336 | 0.817186 | 3.76E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene052615 | 0.820241 | 7.61E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene053632 | 0.8116 | 6.45E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene053915 | 0.805056 | 1.61E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene055502 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene056657 | 0.807406 | 5.13E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene057831 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene059677 | 0.818711 | 1.70E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene061340 | 0.805284 | 1.44E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene063072 | 0.856571 | 2.94E-62 | -1.69E-46 |
| MS.gene04938 | MS.gene06332 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene06408 | 0.803017 | 4.26E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene064800 | 0.812352 | 4.43E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene064862 | 0.805217 | 1.48E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene066844 | 0.805597 | 1.24E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene069995 | 0.811713 | 6.10E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene071525 | 0.816714 | 4.80E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene071526 | 0.802651 | 5.07E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene071527 | 0.816336 | 5.83E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene074247 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene074248 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene074249 | 0.805977 | 1.03E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene074567 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene04938 | MS.gene09649 | 0.833949 | 3.98E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene09650 | 0.849602 | 2.91E-60 | -1.69E-46 |
| MS.gene04938 | MS.gene09661 | 0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene09720 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene04938 | MS.gene09722 | 0.826331 | 2.88E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene09921 | 0.835212 | 1.91E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene09951 | 0.813409 | 2.60E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene21148 | 0.8127 | 3.71E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene21464 | 0.844135 | 9.12E-59 | -1.69E-46 |
| MS.gene04938 | MS.gene21474 | 0.829771 | 4.27E-55 | -1.69E-46 |
| MS.gene04938 | MS.gene22219 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene23914 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene24082 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene24674 | 0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene24767 | 0.807919 | 4.00E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene24950 | 0.813691 | 2.25E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene25011 | 0.822234 | 2.64E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene26526 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene26527 | 0.834728 | 2.53E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene26698 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene27116 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene28052 | 0.827031 | 1.96E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene30556 | 0.840994 | 6.22E-58 | -1.69E-46 |
| MS.gene04938 | MS.gene32050 | 0.847216 | 1.33E-59 | -1.69E-46 |
| MS.gene04938 | MS.gene32251 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene35137 | 0.814152 | 1.78E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene35176 | 0.833972 | 3.92E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene36056 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene36317 | 0.83009 | 3.57E-55 | -1.69E-46 |
| MS.gene04938 | MS.gene38112 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene38715 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene44017 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene44150 | 0.813027 | 3.15E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene46314 | 0.809501 | 1.83E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene46952 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene46979 | 0.820305 | 7.36E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene47811 | 0.82528 | 5.11E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene47831 | 0.836119 | 1.13E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene50561 | 0.835117 | 2.02E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene52412 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene52799 | 0.813378 | 2.64E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene55815 | 0.83516 | 1.97E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene56284 | 0.832286 | 1.03E-55 | -1.69E-46 |
| MS.gene04938 | MS.gene58426 | 0.806617 | 7.54E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene59475 | 0.817643 | 2.96E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene62792 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene04938 | MS.gene63264 | 0.943795 | 6.31E-103 | -1.69E-46 |
| MS.gene04938 | MS.gene63480 | 0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene64006 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene64209 | 0.845837 | 3.17E-59 | -1.69E-46 |
| MS.gene04938 | MS.gene64385 | 0.8051 | 1.57E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene65534 | 0.813645 | 2.31E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene65597 | 0.83839 | 2.96E-57 | -1.69E-46 |
| MS.gene04938 | MS.gene69357 | 0.814089 | 1.84E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene69736 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene71058 | 0.817337 | 3.47E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene71475 | 0.843018 | 1.81E-58 | -1.69E-46 |
| MS.gene04938 | MS.gene71476 | 0.826623 | 2.45E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene72216 | 0.808119 | 3.62E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene73087 | 0.809178 | 2.15E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene73303 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene04938 | MS.gene74184 | 0.858719 | 6.79E-63 | -1.69E-46 |
| MS.gene04938 | MS.gene74217 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene74498 | 0.812764 | 3.60E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene74579 | 0.834605 | 2.72E-56 | -1.69E-46 |
| MS.gene04938 | MS.gene75688 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene04938 | MS.gene76500 | 0.827555 | 1.47E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene77566 | 0.805889 | 1.07E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene78193 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene78723 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene82916 | 0.815842 | 7.52E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene83606 | 0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene84413 | 0.810282 | 1.25E-50 | -1.69E-46 |
| MS.gene04938 | MS.gene88820 | 0.802194 | 6.30E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene89729 | 0.801317 | 9.53E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene90364 | 0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene90796 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene04938 | MS.gene91801 | 0.8029 | 4.50E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene93506 | 0.817553 | 3.11E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene94806 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene04938 | MS.gene95523 | 0.803341 | 3.65E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene96880 | 0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene04938 | MS.gene98745 | 0.815798 | 7.68E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene98746 | 0.82567 | 4.13E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04938 | MS.gene75177 | PPI |
| MS.gene04938 | MS.gene066447 | PPI |
| MS.gene029101 | MS.gene04938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04938.t1 | MTR_3g066060 | 98.305 | 236 | 4 | 0 | 1 | 236 | 1 | 236 | 5.74e-171 | 471 |
| MS.gene04938.t1 | MTR_1g115500 | 60.440 | 182 | 72 | 0 | 55 | 236 | 3 | 184 | 6.08e-82 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04938.t1 | AT5G16710 | 67.401 | 227 | 64 | 3 | 20 | 236 | 4 | 230 | 2.39e-109 | 315 |
| MS.gene04938.t1 | AT1G75270 | 62.295 | 183 | 68 | 1 | 55 | 236 | 3 | 185 | 6.84e-84 | 249 |
| MS.gene04938.t1 | AT1G19570 | 60.109 | 183 | 72 | 1 | 55 | 236 | 3 | 185 | 1.16e-77 | 233 |
| MS.gene04938.t1 | AT1G19550 | 48.529 | 136 | 47 | 1 | 101 | 236 | 13 | 125 | 3.39e-37 | 128 |
Find 65 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAACACCCTTTGGCTAAA+AGG | 0.227026 | 3.4:+67457895 | None:intergenic |
| TTTCTTAAATCCACCAATTT+CGG | 0.274589 | 3.4:+67457841 | None:intergenic |
| TTTACCTTATGAGCCGAAAT+TGG | 0.293942 | 3.4:-67457854 | MS.gene04938:CDS |
| ATGTCTTTCCCATTGATAAA+AGG | 0.296522 | 3.4:+67456357 | None:intergenic |
| TGCTTGTTCTGTTCCGTCAT+TGG | 0.311879 | 3.4:+67456944 | None:intergenic |
| CAGAAGACATTAATACTCTA+AGG | 0.322827 | 3.4:+67460060 | None:intergenic |
| TTACAGTCTCCAATCTTGTT+AGG | 0.323971 | 3.4:+67459987 | None:intergenic |
| CTTTGGGACATTATAAGAAA+TGG | 0.339739 | 3.4:-67456284 | MS.gene04938:CDS |
| GGACAAGCAAATCACCATTC+TGG | 0.348383 | 3.4:+67457814 | None:intergenic |
| TTCCCGTCGAAGTTTATTAC+AGG | 0.353177 | 3.4:+67457673 | None:intergenic |
| TACCATTTGGAGATTGCTTT+GGG | 0.358598 | 3.4:-67456300 | MS.gene04938:CDS |
| GCTTGTTCTGTTCCGTCATT+GGG | 0.376742 | 3.4:+67456945 | None:intergenic |
| TGCTCCTCCTTCTGAGCCAT+TGG | 0.379937 | 3.4:-67460039 | MS.gene04938:CDS |
| CTTACCACTCCTAACAAGAT+TGG | 0.386618 | 3.4:-67459996 | MS.gene04938:CDS |
| TACCTTCAGGACTGATTTCA+AGG | 0.389717 | 3.4:+67457701 | None:intergenic |
| ATACCATTTGGAGATTGCTT+TGG | 0.401508 | 3.4:-67456301 | MS.gene04938:CDS |
| GGGGTCACCAATGGTGGGCT+AGG | 0.413216 | 3.4:+67457601 | None:intergenic |
| TCAGGTGGGGTCACCAATGG+TGG | 0.418534 | 3.4:+67457595 | None:intergenic |
| TCCACCAATTTCGGCTCATA+AGG | 0.421633 | 3.4:+67457850 | None:intergenic |
| TTCCTTGAGGTAATCGTTGA+AGG | 0.431943 | 3.4:+67456902 | None:intergenic |
| ATAGCTTTGGTCCTAGTGAT+AGG | 0.433953 | 3.4:+67456322 | None:intergenic |
| ATTGGTGACCCCACCTGAAA+AGG | 0.441774 | 3.4:-67457590 | MS.gene04938:CDS |
| ATCTCCAAATGGTATAGCTT+TGG | 0.443085 | 3.4:+67456309 | None:intergenic |
| TAATAAACTTCGACGGGAAG+TGG | 0.443533 | 3.4:-67457669 | MS.gene04938:CDS |
| AATACTGAAACCGTTGTTGA+AGG | 0.447254 | 3.4:+67460088 | None:intergenic |
| TCGGTAACGAAGGTGGTTAA+CGG | 0.448814 | 3.4:+67460136 | None:intergenic |
| AGGACCAAAGCTATACCATT+TGG | 0.449238 | 3.4:-67456313 | MS.gene04938:CDS |
| CCAGTGTCAGCAACACCCTT+TGG | 0.465405 | 3.4:+67457887 | None:intergenic |
| GCAACACCCTTTGGCTAAAA+GGG | 0.469686 | 3.4:+67457896 | None:intergenic |
| ATTACAGGAACTTTACCTTC+AGG | 0.472085 | 3.4:+67457688 | None:intergenic |
| CAGGTGGGGTCACCAATGGT+GGG | 0.506564 | 3.4:+67457596 | None:intergenic |
| CTAGTTGAAACGGCGTAGCT+TGG | 0.507274 | 3.4:+67460113 | None:intergenic |
| TTGAAACGGCGTAGCTTGGT+CGG | 0.515114 | 3.4:+67460117 | None:intergenic |
| ACCTTATGAGCCGAAATTGG+TGG | 0.524221 | 3.4:-67457851 | MS.gene04938:CDS |
| GTCCCAAAGCAATCTCCAAA+TGG | 0.525825 | 3.4:+67456298 | None:intergenic |
| CCAAAGGGTGTTGCTGACAC+TGG | 0.528417 | 3.4:-67457887 | MS.gene04938:CDS |
| GCAACTTCCAATGGCTCAGA+AGG | 0.530234 | 3.4:+67460032 | None:intergenic |
| CTTCAAGTAAGACTTCAAAA+AGG | 0.533977 | 3.4:+67456242 | None:intergenic |
| AGATTTAATCACACAAACAT+TGG | 0.534999 | 3.4:-67457635 | MS.gene04938:CDS |
| TTCCTGTAATAAACTTCGAC+GGG | 0.536777 | 3.4:-67457675 | MS.gene04938:CDS |
| GCTTTAACAGCAACTTCCAA+TGG | 0.538010 | 3.4:+67460023 | None:intergenic |
| AGAAGACATTAATACTCTAA+GGG | 0.541970 | 3.4:+67460061 | None:intergenic |
| GTTGAAGGAGCTAGTTGAAA+CGG | 0.542410 | 3.4:+67460103 | None:intergenic |
| TGAATTCTAACGGTGGACAT+TGG | 0.546517 | 3.4:+67460185 | None:intergenic |
| GAAGTATCCTAGCCCACCAT+TGG | 0.558980 | 3.4:-67457608 | MS.gene04938:CDS |
| TTCCTTGAAATCAGTCCTGA+AGG | 0.565919 | 3.4:-67457703 | MS.gene04938:CDS |
| GTTCCTGTAATAAACTTCGA+CGG | 0.569489 | 3.4:-67457676 | MS.gene04938:CDS |
| TCAACTAGCTCCTTCAACAA+CGG | 0.572004 | 3.4:-67460098 | MS.gene04938:CDS |
| TGCTGAAACTTGAATTCTAA+CGG | 0.573659 | 3.4:+67460175 | None:intergenic |
| GTCTCCAATCTTGTTAGGAG+TGG | 0.575745 | 3.4:+67459992 | None:intergenic |
| ACGAAGGTGGTTAACGGTGG+CGG | 0.577042 | 3.4:+67460142 | None:intergenic |
| AAAGGTCAGCGAATCAGGTA+CGG | 0.599548 | 3.4:+67456260 | None:intergenic |
| CTCCTTCAACGATTACCTCA+AGG | 0.601777 | 3.4:-67456904 | MS.gene04938:CDS |
| ACTTCCAATGGCTCAGAAGG+AGG | 0.604566 | 3.4:+67460035 | None:intergenic |
| AATAAACTTCGACGGGAAGT+GGG | 0.608951 | 3.4:-67457668 | MS.gene04938:CDS |
| ATTTAAGAAACAAACCAGAA+TGG | 0.617097 | 3.4:-67457828 | MS.gene04938:intron |
| AGCTTGGTCGGTAACGAAGG+TGG | 0.617242 | 3.4:+67460129 | None:intergenic |
| GAAGACATTAATACTCTAAG+GGG | 0.621045 | 3.4:+67460062 | None:intergenic |
| AAAAGCAAAGATCCCAATGA+CGG | 0.633633 | 3.4:-67456957 | MS.gene04938:CDS |
| CGTAGCTTGGTCGGTAACGA+AGG | 0.633889 | 3.4:+67460126 | None:intergenic |
| AAGGGTGTTGCTGACACTGG+AGG | 0.656952 | 3.4:-67457884 | MS.gene04938:CDS |
| TCTGCGGCTGACCTATCACT+AGG | 0.671764 | 3.4:-67456333 | MS.gene04938:CDS |
| CAATGGGAAAGACATATCTG+CGG | 0.711997 | 3.4:-67456349 | MS.gene04938:CDS |
| GTAACGAAGGTGGTTAACGG+TGG | 0.728437 | 3.4:+67460139 | None:intergenic |
| TGAAACTTGAATTCTAACGG+TGG | 0.756125 | 3.4:+67460178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGATTTTAATACATTA+GGG | - | chr3.4:67459281-67459300 | MS.gene04938:intron | 10.0% |
| !!! | TTTTTTGATTTTAATACATT+AGG | - | chr3.4:67459280-67459299 | MS.gene04938:intron | 10.0% |
| !!! | TTTTTTTTTTGAAAAATACA+TGG | - | chr3.4:67458949-67458968 | MS.gene04938:intron | 10.0% |
| !! | ACAAAAATATAAGGAAAAAA+GGG | + | chr3.4:67459557-67459576 | None:intergenic | 15.0% |
| !! | AGATGTTACAAAATATTAAA+CGG | - | chr3.4:67459733-67459752 | MS.gene04938:intron | 15.0% |
| !! | ATATAAACAAAAATCTTCTT+TGG | + | chr3.4:67457864-67457883 | None:intergenic | 15.0% |
| !! | CAACAAAAAAAATTATTACA+AGG | + | chr3.4:67458694-67458713 | None:intergenic | 15.0% |
| !! | TTATAATTTGGATATATTCA+AGG | + | chr3.4:67459121-67459140 | None:intergenic | 15.0% |
| !! | TTCTATTTATATAACTTTGA+GGG | - | chr3.4:67459945-67459964 | MS.gene04938:intron | 15.0% |
| !! | TTGTAAAGTTTATGAATAAT+TGG | - | chr3.4:67459831-67459850 | MS.gene04938:intron | 15.0% |
| !!! | ATTTTTGTTTATATTTGTAG+AGG | - | chr3.4:67457870-67457889 | MS.gene04938:CDS | 15.0% |
| !!! | CTTGTAATAATTTTTTTTGT+TGG | - | chr3.4:67458692-67458711 | MS.gene04938:intron | 15.0% |
| !!! | TTATATAAATAGAAGTGTTT+TGG | + | chr3.4:67459939-67459958 | None:intergenic | 15.0% |
| !! | AAATAACTAAAACCATGAAA+AGG | + | chr3.4:67456473-67456492 | None:intergenic | 20.0% |
| !! | AAATCAAAGAACAAAGATAA+AGG | + | chr3.4:67458292-67458311 | None:intergenic | 20.0% |
| !! | AAGTAAATACAAGAATAAAG+AGG | + | chr3.4:67459355-67459374 | None:intergenic | 20.0% |
| !! | AATAACTAAAACCATGAAAA+GGG | + | chr3.4:67456472-67456491 | None:intergenic | 20.0% |
| !! | AATTACATTAAATTATGTCG+AGG | - | chr3.4:67456677-67456696 | MS.gene04938:intron | 20.0% |
| !! | ATGTTACAAAATATTAAACG+GGG | - | chr3.4:67459735-67459754 | MS.gene04938:intron | 20.0% |
| !! | CATTGAATACTTAATGTATT+TGG | + | chr3.4:67457203-67457222 | None:intergenic | 20.0% |
| !! | CTTCTATTTATATAACTTTG+AGG | - | chr3.4:67459944-67459963 | MS.gene04938:intron | 20.0% |
| !! | GACAAAAATATAAGGAAAAA+AGG | + | chr3.4:67459558-67459577 | None:intergenic | 20.0% |
| !! | GATGTTACAAAATATTAAAC+GGG | - | chr3.4:67459734-67459753 | MS.gene04938:intron | 20.0% |
| !! | GGTTAAAAAATTTATACGAA+AGG | + | chr3.4:67460020-67460039 | None:intergenic | 20.0% |
| !! | TATAATAGACCAAATACATT+AGG | + | chr3.4:67457176-67457195 | None:intergenic | 20.0% |
| !! | TATACTACTTAAGTGAATTA+AGG | - | chr3.4:67457078-67457097 | MS.gene04938:intron | 20.0% |
| !! | TCTTTATTCTTGTATTTACT+TGG | - | chr3.4:67459354-67459373 | MS.gene04938:intron | 20.0% |
| !! | TTCATGGATGATTTATAATT+TGG | + | chr3.4:67459133-67459152 | None:intergenic | 20.0% |
| !!! | AAGATCTTTTCTACATTTAT+TGG | - | chr3.4:67459437-67459456 | MS.gene04938:intron | 20.0% |
| !!! | AATTTTATATACCCTTATGA+TGG | - | chr3.4:67456886-67456905 | MS.gene04938:intron | 20.0% |
| !!! | ATAATTTTTTTTGTTGGTTC+AGG | - | chr3.4:67458698-67458717 | MS.gene04938:intron | 20.0% |
| !!! | CATAAGTTTTGAAAATGTTT+AGG | - | chr3.4:67456748-67456767 | MS.gene04938:intron | 20.0% |
| !!! | CTATAAACTTTCAGTATTTT+AGG | - | chr3.4:67459601-67459620 | MS.gene04938:intron | 20.0% |
| !!! | TAAGCAAAAAACTACATTTT+AGG | - | chr3.4:67457139-67457158 | MS.gene04938:intron | 20.0% |
| !!! | TTTATTTTTGCTTTAGTTCA+TGG | - | chr3.4:67457756-67457775 | MS.gene04938:intron | 20.0% |
| !!! | TTTGTTCTTTGATTTAATTG+TGG | - | chr3.4:67458297-67458316 | MS.gene04938:intron | 20.0% |
| !!! | TTTTGATTAATTGTGTCATA+CGG | + | chr3.4:67459320-67459339 | None:intergenic | 20.0% |
| ! | AATTCACTTAAGTAGTATAC+AGG | + | chr3.4:67457077-67457096 | None:intergenic | 25.0% |
| ! | ACACTACAAGAAAAGTTATA+GGG | + | chr3.4:67459679-67459698 | None:intergenic | 25.0% |
| ! | ACATCTTATGTATATACAAG+AGG | + | chr3.4:67459719-67459738 | None:intergenic | 25.0% |
| ! | ACTAAGGAAAAATACATTCA+TGG | + | chr3.4:67459149-67459168 | None:intergenic | 25.0% |
| ! | AGAAGACATTAATACTCTAA+GGG | + | chr3.4:67456366-67456385 | None:intergenic | 25.0% |
| ! | AGATTTAATCACACAAACAT+TGG | - | chr3.4:67458789-67458808 | MS.gene04938:intron | 25.0% |
| ! | AGTTATGAATTATTAGAGGA+AGG | - | chr3.4:67458110-67458129 | MS.gene04938:intron | 25.0% |
| ! | ATTTAAGAAACAAACCAGAA+TGG | - | chr3.4:67458596-67458615 | MS.gene04938:intron | 25.0% |
| ! | GAAATTCAAATCACAAACAA+TGG | - | chr3.4:67456980-67456999 | MS.gene04938:CDS | 25.0% |
| ! | TAATAATTCATAACTACCCA+AGG | + | chr3.4:67458105-67458124 | None:intergenic | 25.0% |
| ! | TGAAAAGAAAAAATTTGCAC+AGG | + | chr3.4:67460041-67460060 | None:intergenic | 25.0% |
| ! | TGAATAGACAATTCAACAAA+GGG | + | chr3.4:67458506-67458525 | None:intergenic | 25.0% |
| ! | TTAGTATTATATACTACCTC+CGG | + | chr3.4:67457260-67457279 | None:intergenic | 25.0% |
| ! | TTATACATTTCCTCATCATT+TGG | - | chr3.4:67458877-67458896 | MS.gene04938:intron | 25.0% |
| ! | TTTCTTAAATCCACCAATTT+CGG | + | chr3.4:67458586-67458605 | None:intergenic | 25.0% |
| !! | AAAAATTCTTACCCTTTTCA+TGG | - | chr3.4:67456458-67456477 | MS.gene04938:intron | 25.0% |
| !! | ATTAGTATTTGAGACATTGA+TGG | - | chr3.4:67456542-67456561 | MS.gene04938:intron | 25.0% |
| !! | GTATTTTTCCTTAGTCAATT+TGG | - | chr3.4:67459154-67459173 | MS.gene04938:intron | 25.0% |
| !! | TCTAAAATTTAGCTAGTAAC+TGG | + | chr3.4:67457613-67457632 | None:intergenic | 25.0% |
| !! | TTCTTTTGTTAGCAATTTCA+TGG | + | chr3.4:67459246-67459265 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr3.4:67457238-67457257 | MS.gene04938:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+TGG | + | chr3.4:67457257-67457238 | None:intergenic | 25.0% |
| !!! | GCAAATTTTTTCTTTTCACA+GGG | - | chr3.4:67460043-67460062 | MS.gene04938:CDS | 25.0% |
| !!! | TGCAAATTTTTTCTTTTCAC+AGG | - | chr3.4:67460042-67460061 | MS.gene04938:CDS | 25.0% |
| !!! | TTGAGCTTGTTTTTTTGTAT+TGG | - | chr3.4:67456499-67456518 | MS.gene04938:intron | 25.0% |
| !!! | TTTTCCTTATATTTTTGTCC+CGG | - | chr3.4:67459559-67459578 | MS.gene04938:intron | 25.0% |
| AAAAAGGAGTCCTAGTAATT+CGG | + | chr3.4:67457554-67457573 | None:intergenic | 30.0% | |
| AAATGATAGACAAATCCAGA+AGG | + | chr3.4:67459991-67460010 | None:intergenic | 30.0% | |
| AAGATTGTAAACAAATAGCC+GGG | + | chr3.4:67459580-67459599 | None:intergenic | 30.0% | |
| AATGTTTAGGAGTAAAGTTG+AGG | - | chr3.4:67456761-67456780 | MS.gene04938:intron | 30.0% | |
| ACTGGTCATGTATGATTTAT+TGG | + | chr3.4:67457595-67457614 | None:intergenic | 30.0% | |
| ATAAAATCAAATCCTACCCT+TGG | + | chr3.4:67456928-67456947 | None:intergenic | 30.0% | |
| ATACATGAACAGTAACCAAA+TGG | - | chr3.4:67457471-67457490 | MS.gene04938:intron | 30.0% | |
| ATGTATTGAGTACAGTTCAT+AGG | + | chr3.4:67457457-67457476 | None:intergenic | 30.0% | |
| ATGTCTTTCCCATTGATAAA+AGG | + | chr3.4:67460070-67460089 | None:intergenic | 30.0% | |
| ATGTGTGGAGCAAATATTAA+AGG | + | chr3.4:67458398-67458417 | None:intergenic | 30.0% | |
| ATGTTTAGGAGTAAAGTTGA+GGG | - | chr3.4:67456762-67456781 | MS.gene04938:intron | 30.0% | |
| CAAATTATCTCCAAATGATG+AGG | + | chr3.4:67458890-67458909 | None:intergenic | 30.0% | |
| CAAGATTGTAAACAAATAGC+CGG | + | chr3.4:67459581-67459600 | None:intergenic | 30.0% | |
| CACACTACAAGAAAAGTTAT+AGG | + | chr3.4:67459680-67459699 | None:intergenic | 30.0% | |
| CAGAAGACATTAATACTCTA+AGG | + | chr3.4:67456367-67456386 | None:intergenic | 30.0% | |
| CATTGAATGCCTAATGTATT+TGG | - | chr3.4:67457164-67457183 | MS.gene04938:intron | 30.0% | |
| CTCATCATTTGGAGATAATT+TGG | - | chr3.4:67458888-67458907 | MS.gene04938:intron | 30.0% | |
| CTGAATAGACAATTCAACAA+AGG | + | chr3.4:67458507-67458526 | None:intergenic | 30.0% | |
| CTTCAAGTAAGACTTCAAAA+AGG | + | chr3.4:67460185-67460204 | None:intergenic | 30.0% | |
| CTTTGTTGAATTGTCTATTC+AGG | - | chr3.4:67458505-67458524 | MS.gene04938:intron | 30.0% | |
| GAAGACATTAATACTCTAAG+GGG | + | chr3.4:67456365-67456384 | None:intergenic | 30.0% | |
| GATCGTTTATTTACGCAATT+TGG | - | chr3.4:67457008-67457027 | MS.gene04938:intron | 30.0% | |
| GATTAGCGAAAGATATATCT+GGG | + | chr3.4:67459215-67459234 | None:intergenic | 30.0% | |
| GGAGGTAGTATATAATACTA+AGG | - | chr3.4:67457259-67457278 | MS.gene04938:intron | 30.0% | |
| GGGTAGTTATGAATTATTAG+AGG | - | chr3.4:67458106-67458125 | MS.gene04938:intron | 30.0% | |
| GTCAAAAACACAGTAGTTAT+AGG | + | chr3.4:67457987-67458006 | None:intergenic | 30.0% | |
| GTTATGAATAATCTGTTGCA+TGG | - | chr3.4:67456592-67456611 | MS.gene04938:intron | 30.0% | |
| TAAAATCAAATCCTACCCTT+GGG | + | chr3.4:67456927-67456946 | None:intergenic | 30.0% | |
| TAATTCGGAATTTGATCAAG+AGG | + | chr3.4:67457539-67457558 | None:intergenic | 30.0% | |
| TGAATTAAGGTTTACATCGT+TGG | - | chr3.4:67457091-67457110 | MS.gene04938:intron | 30.0% | |
| TGATCAAATTCCGAATTACT+AGG | - | chr3.4:67457541-67457560 | MS.gene04938:intron | 30.0% | |
| TGATTAGCGAAAGATATATC+TGG | + | chr3.4:67459216-67459235 | None:intergenic | 30.0% | |
| TGCTGAAACTTGAATTCTAA+CGG | + | chr3.4:67456252-67456271 | None:intergenic | 30.0% | |
| TTCAAGAACCAAATTGACTA+AGG | + | chr3.4:67459165-67459184 | None:intergenic | 30.0% | |
| ! | ATTTGAGACATTGATGGTAT+TGG | - | chr3.4:67456548-67456567 | MS.gene04938:intron | 30.0% |
| ! | CATGTGATTTTGTCTATAGT+GGG | - | chr3.4:67459411-67459430 | MS.gene04938:intron | 30.0% |
| !! | CTTTGGGACATTATAAGAAA+TGG | - | chr3.4:67460140-67460159 | MS.gene04938:CDS | 30.0% |
| !! | TAGAAAAAGTTGATGACTTG+TGG | + | chr3.4:67458652-67458671 | None:intergenic | 30.0% |
| !! | TGGTATTGGTAGAAAGAATA+CGG | - | chr3.4:67456562-67456581 | MS.gene04938:intron | 30.0% |
| AAAAATCTGACATGCAGTAG+TGG | + | chr3.4:67459046-67459065 | None:intergenic | 35.0% | |
| AAAAGCAAAGATCCCAATGA+CGG | - | chr3.4:67459467-67459486 | MS.gene04938:intron | 35.0% | |
| AAAATCTGACATGCAGTAGT+GGG | + | chr3.4:67459045-67459064 | None:intergenic | 35.0% | |
| AATACTGAAACCGTTGTTGA+AGG | + | chr3.4:67456339-67456358 | None:intergenic | 35.0% | |
| AATGATATTGAGAATGCACG+TGG | + | chr3.4:67456823-67456842 | None:intergenic | 35.0% | |
| ACTCTATGATTCCAATACAG+AGG | + | chr3.4:67457806-67457825 | None:intergenic | 35.0% | |
| AGAAAATAGAACCTAGAGAG+AGG | - | chr3.4:67458023-67458042 | MS.gene04938:intron | 35.0% | |
| AGAAATTGGGGACAATTTCT+TGG | - | chr3.4:67458198-67458217 | MS.gene04938:intron | 35.0% | |
| AGAACTAACTAGAGAAAGGT+TGG | + | chr3.4:67458138-67458157 | None:intergenic | 35.0% | |
| AGTGACATCTGATAGATTCA+AGG | + | chr3.4:67459093-67459112 | None:intergenic | 35.0% | |
| ATACCATTTGGAGATTGCTT+TGG | - | chr3.4:67460123-67460142 | MS.gene04938:CDS | 35.0% | |
| ATAGCCGGGACAAAAATATA+AGG | + | chr3.4:67459566-67459585 | None:intergenic | 35.0% | |
| ATCTCCAAATGGTATAGCTT+TGG | + | chr3.4:67460118-67460137 | None:intergenic | 35.0% | |
| ATTACAGGAACTTTACCTTC+AGG | + | chr3.4:67458739-67458758 | None:intergenic | 35.0% | |
| CAGCATTTGAGTCTTAAACT+TGG | - | chr3.4:67458451-67458470 | MS.gene04938:intron | 35.0% | |
| CTCAAGAACTAACTAGAGAA+AGG | + | chr3.4:67458142-67458161 | None:intergenic | 35.0% | |
| GAAAATAGAACCTAGAGAGA+GGG | - | chr3.4:67458024-67458043 | MS.gene04938:intron | 35.0% | |
| GCTAACAAAAGAAACTCACA+TGG | - | chr3.4:67459253-67459272 | MS.gene04938:intron | 35.0% | |
| GGAATTTGATCAAGAGGTAA+GGG | + | chr3.4:67457533-67457552 | None:intergenic | 35.0% | |
| GTGACATCTGATAGATTCAA+GGG | + | chr3.4:67459092-67459111 | None:intergenic | 35.0% | |
| GTTCCTGTAATAAACTTCGA+CGG | - | chr3.4:67458748-67458767 | MS.gene04938:intron | 35.0% | |
| TACCATTTGGAGATTGCTTT+GGG | - | chr3.4:67460124-67460143 | MS.gene04938:CDS | 35.0% | |
| TAGTTCATGGATGTAGGAAA+TGG | - | chr3.4:67457769-67457788 | MS.gene04938:intron | 35.0% | |
| TGAAACTTGAATTCTAACGG+TGG | + | chr3.4:67456249-67456268 | None:intergenic | 35.0% | |
| TGAGTGATTCATCTTTGAGT+GGG | - | chr3.4:67458158-67458177 | MS.gene04938:intron | 35.0% | |
| TGCTTATAAATGTGACTGGA+GGG | + | chr3.4:67457125-67457144 | None:intergenic | 35.0% | |
| TGTGGTCTGTAAGTGAAAAA+TGG | + | chr3.4:67458634-67458653 | None:intergenic | 35.0% | |
| TTACAGTCTCCAATCTTGTT+AGG | + | chr3.4:67456440-67456459 | None:intergenic | 35.0% | |
| TTCCTGTAATAAACTTCGAC+GGG | - | chr3.4:67458749-67458768 | MS.gene04938:intron | 35.0% | |
| TTGAGTGATTCATCTTTGAG+TGG | - | chr3.4:67458157-67458176 | MS.gene04938:intron | 35.0% | |
| TTGCTTATAAATGTGACTGG+AGG | + | chr3.4:67457126-67457145 | None:intergenic | 35.0% | |
| TTTACCTTATGAGCCGAAAT+TGG | - | chr3.4:67458570-67458589 | MS.gene04938:intron | 35.0% | |
| ! | AGTAGTGGGGAAAAACATAA+AGG | + | chr3.4:67459031-67459050 | None:intergenic | 35.0% |
| ! | CTTTTCCTGCATTATTGTCA+TGG | - | chr3.4:67459652-67459671 | MS.gene04938:intron | 35.0% |
| ! | GCATGTGATTTTGTCTATAG+TGG | - | chr3.4:67459410-67459429 | MS.gene04938:intron | 35.0% |
| ! | GTAGTGGGGAAAAACATAAA+GGG | + | chr3.4:67459030-67459049 | None:intergenic | 35.0% |
| ! | TAGGTTGCTAGATTTCCTTT+TGG | - | chr3.4:67458334-67458353 | MS.gene04938:intron | 35.0% |
| ! | TGCCTTAAAATCTGCTGTTT+GGG | - | chr3.4:67457897-67457916 | MS.gene04938:CDS | 35.0% |
| ! | TTACTAGGACTCCTTTTTCT+TGG | - | chr3.4:67457556-67457575 | MS.gene04938:intron | 35.0% |
| ! | TTGCTTTAGTTCATGGATGT+AGG | - | chr3.4:67457763-67457782 | MS.gene04938:intron | 35.0% |
| ! | TTTTCTTATCTCGATCCTTC+TGG | - | chr3.4:67459973-67459992 | MS.gene04938:intron | 35.0% |
| !! | TGTGGATTTGCTATACATCT+AGG | - | chr3.4:67458315-67458334 | MS.gene04938:intron | 35.0% |
| AAATCTGACATGCAGTAGTG+GGG | + | chr3.4:67459044-67459063 | None:intergenic | 40.0% | |
| AATAAACTTCGACGGGAAGT+GGG | - | chr3.4:67458756-67458775 | MS.gene04938:intron | 40.0% | |
| ACAGGAGCTCATTAACCATT+TGG | + | chr3.4:67457489-67457508 | None:intergenic | 40.0% | |
| ACAGTTCATAGGCACAAAAG+AGG | + | chr3.4:67457446-67457465 | None:intergenic | 40.0% | |
| AGAGAGGAAAGGAGAGAAAT+TGG | - | chr3.4:67458184-67458203 | MS.gene04938:intron | 40.0% | |
| AGAGGAAAGGAGAGAAATTG+GGG | - | chr3.4:67458186-67458205 | MS.gene04938:intron | 40.0% | |
| AGCAACAGCAATCAACCAAA+AGG | + | chr3.4:67458352-67458371 | None:intergenic | 40.0% | |
| AGGACCAAAGCTATACCATT+TGG | - | chr3.4:67460111-67460130 | MS.gene04938:CDS | 40.0% | |
| AGTTCATAGGCACAAAAGAG+GGG | + | chr3.4:67457444-67457463 | None:intergenic | 40.0% | |
| CAAACCCTGTTCCAAGAAAA+AGG | + | chr3.4:67457570-67457589 | None:intergenic | 40.0% | |
| CAATACAACAGCCTCTGTAT+TGG | - | chr3.4:67457792-67457811 | MS.gene04938:intron | 40.0% | |
| CAATGGGAAAGACATATCTG+CGG | - | chr3.4:67460075-67460094 | MS.gene04938:CDS | 40.0% | |
| CAGTTCATAGGCACAAAAGA+GGG | + | chr3.4:67457445-67457464 | None:intergenic | 40.0% | |
| CGGAATTTGATCAAGAGGTA+AGG | + | chr3.4:67457534-67457553 | None:intergenic | 40.0% | |
| CTTACCACTCCTAACAAGAT+TGG | - | chr3.4:67456428-67456447 | MS.gene04938:intron | 40.0% | |
| GAGACTTTGTTAACCCAGTT+CGG | + | chr3.4:67458253-67458272 | None:intergenic | 40.0% | |
| GAGAGGAAAGGAGAGAAATT+GGG | - | chr3.4:67458185-67458204 | MS.gene04938:intron | 40.0% | |
| GCTTTAACAGCAACTTCCAA+TGG | + | chr3.4:67456404-67456423 | None:intergenic | 40.0% | |
| GTAGAAAGAATACGGTAGTG+TGG | - | chr3.4:67456570-67456589 | MS.gene04938:intron | 40.0% | |
| GTGCCTTAAAATCTGCTGTT+TGG | - | chr3.4:67457896-67457915 | MS.gene04938:CDS | 40.0% | |
| GTTGAAGGAGCTAGTTGAAA+CGG | + | chr3.4:67456324-67456343 | None:intergenic | 40.0% | |
| TAATAAACTTCGACGGGAAG+TGG | - | chr3.4:67458755-67458774 | MS.gene04938:intron | 40.0% | |
| TCAACTAGCTCCTTCAACAA+CGG | - | chr3.4:67456326-67456345 | MS.gene04938:CDS | 40.0% | |
| TCAGGGATGTTGTTGTAATC+TGG | + | chr3.4:67457286-67457305 | None:intergenic | 40.0% | |
| TCTGGGAATCAAACTGACTA+AGG | + | chr3.4:67459198-67459217 | None:intergenic | 40.0% | |
| TTCAAAAAGGTCAGCGAATC+AGG | + | chr3.4:67460172-67460191 | None:intergenic | 40.0% | |
| TTCCCGTCGAAGTTTATTAC+AGG | + | chr3.4:67458754-67458773 | None:intergenic | 40.0% | |
| TTCCTTGAAATCAGTCCTGA+AGG | - | chr3.4:67458721-67458740 | MS.gene04938:intron | 40.0% | |
| TTCCTTGAGGTAATCGTTGA+AGG | + | chr3.4:67459525-67459544 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr3.4:67457241-67457260 | MS.gene04938:intron | 40.0% | |
| ! | ACCCCAAACAGCAGATTTTA+AGG | + | chr3.4:67457902-67457921 | None:intergenic | 40.0% |
| ! | AGGGTCATACATTTTCCTTG+AGG | + | chr3.4:67459538-67459557 | None:intergenic | 40.0% |
| ! | CACAGGGTCCTTTTATCAAT+GGG | - | chr3.4:67460059-67460078 | MS.gene04938:CDS | 40.0% |
| ! | CTTTTTCTTGGAACAGGGTT+TGG | - | chr3.4:67457568-67457587 | MS.gene04938:intron | 40.0% |
| ! | GACTCCTTTTTCTTGGAACA+GGG | - | chr3.4:67457563-67457582 | MS.gene04938:intron | 40.0% |
| ! | GCCTTAAAATCTGCTGTTTG+GGG | - | chr3.4:67457898-67457917 | MS.gene04938:CDS | 40.0% |
| ! | TACCTTCAGGACTGATTTCA+AGG | + | chr3.4:67458726-67458745 | None:intergenic | 40.0% |
| ! | TCACAGGGTCCTTTTATCAA+TGG | - | chr3.4:67460058-67460077 | MS.gene04938:CDS | 40.0% |
| ! | TTGAAGGTGTGTCTTGTATC+CGG | - | chr3.4:67456625-67456644 | MS.gene04938:intron | 40.0% |
| ! | TTTGGTTGATTGCTGTTGCT+TGG | - | chr3.4:67458352-67458371 | MS.gene04938:intron | 40.0% |
| !! | ATAGCTTTGGTCCTAGTGAT+AGG | + | chr3.4:67460105-67460124 | None:intergenic | 40.0% |
| !! | ATGGTATCGGTACCATCATA+AGG | + | chr3.4:67456901-67456920 | None:intergenic | 40.0% |
| !! | TGGTATCGGTACCATCATAA+GGG | + | chr3.4:67456900-67456919 | None:intergenic | 40.0% |
| AAAGGTCAGCGAATCAGGTA+CGG | + | chr3.4:67460167-67460186 | None:intergenic | 45.0% | |
| AAATCCTACCCTTGGGTAGA+TGG | + | chr3.4:67456920-67456939 | None:intergenic | 45.0% | |
| ACCCAGACGTAGGTGAATTT+GGG | - | chr3.4:67458227-67458246 | MS.gene04938:intron | 45.0% | |
| ACCTTATGAGCCGAAATTGG+TGG | - | chr3.4:67458573-67458592 | MS.gene04938:intron | 45.0% | |
| AGCAACACCCTTTGGCTAAA+AGG | + | chr3.4:67458532-67458551 | None:intergenic | 45.0% | |
| AGGGAACACGGAAAAACCTA+GGG | - | chr3.4:67458043-67458062 | MS.gene04938:intron | 45.0% | |
| AGGGTCCATGACAATAATGC+AGG | + | chr3.4:67459660-67459679 | None:intergenic | 45.0% | |
| CAAATGCAAGGAAGGGTGAA+AGG | - | chr3.4:67457384-67457403 | MS.gene04938:intron | 45.0% | |
| CAACTACTCTGTAGTCAGAG+AGG | + | chr3.4:67457050-67457069 | None:intergenic | 45.0% | |
| CACACCAAGACAATGATGTG+TGG | + | chr3.4:67458413-67458432 | None:intergenic | 45.0% | |
| CTCCTTCAACGATTACCTCA+AGG | - | chr3.4:67459520-67459539 | MS.gene04938:intron | 45.0% | |
| CTTTCACCCTTCCTTGCATT+TGG | + | chr3.4:67457386-67457405 | None:intergenic | 45.0% | |
| GCAACACCCTTTGGCTAAAA+GGG | + | chr3.4:67458531-67458550 | None:intergenic | 45.0% | |
| GCAGGAAAAGATGTAATGCC+AGG | + | chr3.4:67459642-67459661 | None:intergenic | 45.0% | |
| GCATGGACACTTCTGATTGA+AGG | - | chr3.4:67456609-67456628 | MS.gene04938:intron | 45.0% | |
| GCTTGTTCTGTTCCGTCATT+GGG | + | chr3.4:67459482-67459501 | None:intergenic | 45.0% | |
| GGACAAGCAAATCACCATTC+TGG | + | chr3.4:67458613-67458632 | None:intergenic | 45.0% | |
| GTCCCAAAGCAATCTCCAAA+TGG | + | chr3.4:67460129-67460148 | None:intergenic | 45.0% | |
| GTCTCCAATCTTGTTAGGAG+TGG | + | chr3.4:67456435-67456454 | None:intergenic | 45.0% | |
| TACCCTTGGGTAGATGGTAT+CGG | + | chr3.4:67456914-67456933 | None:intergenic | 45.0% | |
| TACCGATACCATCTACCCAA+GGG | - | chr3.4:67456909-67456928 | MS.gene04938:CDS | 45.0% | |
| TCCACCAATTTCGGCTCATA+AGG | + | chr3.4:67458577-67458596 | None:intergenic | 45.0% | |
| TCGGTAACGAAGGTGGTTAA+CGG | + | chr3.4:67456291-67456310 | None:intergenic | 45.0% | |
| TGCTCCACACATCATTGTCT+TGG | - | chr3.4:67458406-67458425 | MS.gene04938:intron | 45.0% | |
| TGCTTGTTCTGTTCCGTCAT+TGG | + | chr3.4:67459483-67459502 | None:intergenic | 45.0% | |
| TGGTCATGTATGACCTTGAC+AGG | + | chr3.4:67457507-67457526 | None:intergenic | 45.0% | |
| TGGTTAATGAGCTCCTGTCA+AGG | - | chr3.4:67457491-67457510 | MS.gene04938:intron | 45.0% | |
| TTTGGGCCAAATGCAAGGAA+GGG | - | chr3.4:67457377-67457396 | MS.gene04938:intron | 45.0% | |
| ! | AATCTGCTGTTTGGGGTTTC+TGG | - | chr3.4:67457905-67457924 | MS.gene04938:intron | 45.0% |
| ! | ATTCAGGCCCTTTTAGCCAA+AGG | - | chr3.4:67458521-67458540 | MS.gene04938:intron | 45.0% |
| ! | GGACTCCTTTTTCTTGGAAC+AGG | - | chr3.4:67457562-67457581 | MS.gene04938:intron | 45.0% |
| ! | TTCAGGCCCTTTTAGCCAAA+GGG | - | chr3.4:67458522-67458541 | MS.gene04938:intron | 45.0% |
| !! | ATCTTTGAGTGGGTTGAGAG+AGG | - | chr3.4:67458168-67458187 | MS.gene04938:intron | 45.0% |
| !! | TGCTGTTGCTTGGACTGTTT+TGG | - | chr3.4:67458362-67458381 | MS.gene04938:intron | 45.0% |
| !! | TTCGAGTGTTGAGAGCTCTT+GGG | - | chr3.4:67458066-67458085 | MS.gene04938:intron | 45.0% |
| AACATCCCTGAAACGTACCG+CGG | - | chr3.4:67457295-67457314 | MS.gene04938:intron | 50.0% | |
| ACTTCCAATGGCTCAGAAGG+AGG | + | chr3.4:67456392-67456411 | None:intergenic | 50.0% | |
| AGGTCTCTCAATCTCTGACC+TGG | - | chr3.4:67459621-67459640 | MS.gene04938:intron | 50.0% | |
| AGGTGAATTTGGGCCGAACT+GGG | - | chr3.4:67458237-67458256 | MS.gene04938:intron | 50.0% | |
| ATAGGCACAAAAGAGGGGCA+AGG | + | chr3.4:67457439-67457458 | None:intergenic | 50.0% | |
| CACCCAGACGTAGGTGAATT+TGG | - | chr3.4:67458226-67458245 | MS.gene04938:intron | 50.0% | |
| CTAGTTGAAACGGCGTAGCT+TGG | + | chr3.4:67456314-67456333 | None:intergenic | 50.0% | |
| GAACCTAGAGAGAGGGAACA+CGG | - | chr3.4:67458031-67458050 | MS.gene04938:intron | 50.0% | |
| GAGGGAACACGGAAAAACCT+AGG | - | chr3.4:67458042-67458061 | MS.gene04938:intron | 50.0% | |
| GATACCATCTACCCAAGGGT+AGG | - | chr3.4:67456913-67456932 | MS.gene04938:CDS | 50.0% | |
| GCAACTTCCAATGGCTCAGA+AGG | + | chr3.4:67456395-67456414 | None:intergenic | 50.0% | |
| GCCCAAATTCACCTACGTCT+GGG | + | chr3.4:67458231-67458250 | None:intergenic | 50.0% | |
| GTAACGAAGGTGGTTAACGG+TGG | + | chr3.4:67456288-67456307 | None:intergenic | 50.0% | |
| GTTTGGGCCAAATGCAAGGA+AGG | - | chr3.4:67457376-67457395 | MS.gene04938:intron | 50.0% | |
| TAGGCACAAAAGAGGGGCAA+GGG | + | chr3.4:67457438-67457457 | None:intergenic | 50.0% | |
| TAGGTGAATTTGGGCCGAAC+TGG | - | chr3.4:67458236-67458255 | MS.gene04938:intron | 50.0% | |
| TGATCAAGAGGTAAGGGAGC+TGG | + | chr3.4:67457527-67457546 | None:intergenic | 50.0% | |
| TGTAGTGTGCATCGCTTAGC+TGG | - | chr3.4:67459691-67459710 | MS.gene04938:intron | 50.0% | |
| TTGAAACGGCGTAGCTTGGT+CGG | + | chr3.4:67456310-67456329 | None:intergenic | 50.0% | |
| TTTCCGTGTTCCCTCTCTCT+AGG | + | chr3.4:67458037-67458056 | None:intergenic | 50.0% | |
| TTTGTTGCAGGGAGCGACTA+GGG | + | chr3.4:67457338-67457357 | None:intergenic | 50.0% | |
| ! | AAGCCCGACTGTTTGTTGCA+GGG | + | chr3.4:67457349-67457368 | None:intergenic | 50.0% |
| ! | ATTGGTGACCCCACCTGAAA+AGG | - | chr3.4:67458834-67458853 | MS.gene04938:intron | 50.0% |
| ! | GAAGTATCCTAGCCCACCAT+TGG | - | chr3.4:67458816-67458835 | MS.gene04938:intron | 50.0% |
| ! | GCATACGCTGTAGCCTTTTC+AGG | + | chr3.4:67458850-67458869 | None:intergenic | 50.0% |
| ! | GTACCGATACCATCTACCCA+AGG | - | chr3.4:67456908-67456927 | MS.gene04938:CDS | 50.0% |
| ! | TAAGCCCGACTGTTTGTTGC+AGG | + | chr3.4:67457350-67457369 | None:intergenic | 50.0% |
| !! | GTTCGAGTGTTGAGAGCTCT+TGG | - | chr3.4:67458065-67458084 | MS.gene04938:intron | 50.0% |
| !! | TACGCTGTAGCCTTTTCAGG+TGG | + | chr3.4:67458847-67458866 | None:intergenic | 50.0% |
| !! | TGAGTGGGTTGAGAGAGGAA+AGG | - | chr3.4:67458173-67458192 | MS.gene04938:intron | 50.0% |
| !!! | ACGCTGTAGCCTTTTCAGGT+GGG | + | chr3.4:67458846-67458865 | None:intergenic | 50.0% |
| !!! | TTTTCAGGTGGGGTCACCAA+TGG | + | chr3.4:67458835-67458854 | None:intergenic | 50.0% |
| ACATCCCTGAAACGTACCGC+GGG | - | chr3.4:67457296-67457315 | MS.gene04938:intron | 55.0% | |
| ACGAAGGTGGTTAACGGTGG+CGG | + | chr3.4:67456285-67456304 | None:intergenic | 55.0% | |
| AGCTCTTGGGCGAGGTTCTA+GGG | - | chr3.4:67458079-67458098 | MS.gene04938:intron | 55.0% | |
| AGCTTGGTCGGTAACGAAGG+TGG | + | chr3.4:67456298-67456317 | None:intergenic | 55.0% | |
| AGTCGGGCTTAACGCACGTT+TGG | - | chr3.4:67457359-67457378 | MS.gene04938:intron | 55.0% | |
| CCAGTGTCAGCAACACCCTT+TGG | + | chr3.4:67458540-67458559 | None:intergenic | 55.0% | |
| CGCTCCCTGCAACAAACAGT+CGG | - | chr3.4:67457342-67457361 | MS.gene04938:intron | 55.0% | |
| CGTAGCTTGGTCGGTAACGA+AGG | + | chr3.4:67456301-67456320 | None:intergenic | 55.0% | |
| GCACGTTTGGGCCAAATGCA+AGG | - | chr3.4:67457372-67457391 | MS.gene04938:intron | 55.0% | |
| GCTCCCTGCAACAAACAGTC+GGG | - | chr3.4:67457343-67457362 | MS.gene04938:intron | 55.0% | |
| GCTCTCAACACTCGAACCCT+AGG | + | chr3.4:67458062-67458081 | None:intergenic | 55.0% | |
| GGCCCAAATTCACCTACGTC+TGG | + | chr3.4:67458232-67458251 | None:intergenic | 55.0% | |
| GTCGGGCTTAACGCACGTTT+GGG | - | chr3.4:67457360-67457379 | MS.gene04938:intron | 55.0% | |
| TCTGCGGCTGACCTATCACT+AGG | - | chr3.4:67460091-67460110 | MS.gene04938:CDS | 55.0% | |
| TGCTCCTCCTTCTGAGCCAT+TGG | - | chr3.4:67456385-67456404 | MS.gene04938:intron | 55.0% | |
| TTGGTCACTCACCCAGACGT+AGG | - | chr3.4:67458217-67458236 | MS.gene04938:intron | 55.0% | |
| ! | CGAGGTGTCAGTTTCAGCGT+CGG | - | chr3.4:67456695-67456714 | MS.gene04938:intron | 55.0% |
| ! | CTGCTGTTTGGGGTTTCTGG+TGG | - | chr3.4:67457908-67457927 | MS.gene04938:intron | 55.0% |
| ! | GTTTGTTGCAGGGAGCGACT+AGG | + | chr3.4:67457339-67457358 | None:intergenic | 55.0% |
| !! | AAGGGTGTTGCTGACACTGG+AGG | - | chr3.4:67458540-67458559 | MS.gene04938:intron | 55.0% |
| !! | CAGTTTCAGCGTCGGTGTGT+CGG | - | chr3.4:67456703-67456722 | MS.gene04938:intron | 55.0% |
| !! | CCAAAGGGTGTTGCTGACAC+TGG | - | chr3.4:67458537-67458556 | MS.gene04938:intron | 55.0% |
| !!! | CGCTGTAGCCTTTTCAGGTG+GGG | + | chr3.4:67458845-67458864 | None:intergenic | 55.0% |
| ATCCCTGAAACGTACCGCGG+GGG | - | chr3.4:67457298-67457317 | MS.gene04938:intron | 60.0% | |
| CAGGTGGGGTCACCAATGGT+GGG | + | chr3.4:67458831-67458850 | None:intergenic | 60.0% | |
| CATCCCTGAAACGTACCGCG+GGG | - | chr3.4:67457297-67457316 | MS.gene04938:intron | 60.0% | |
| GAGCTCTTGGGCGAGGTTCT+AGG | - | chr3.4:67458078-67458097 | MS.gene04938:intron | 60.0% | |
| GTCTCGAACGCGACACTTGC+CGG | + | chr3.4:67456647-67456666 | None:intergenic | 60.0% | |
| GTGTTGAGAGCTCTTGGGCG+AGG | - | chr3.4:67458071-67458090 | MS.gene04938:intron | 60.0% | |
| TCAGGTGGGGTCACCAATGG+TGG | + | chr3.4:67458832-67458851 | None:intergenic | 60.0% | |
| AGCCCCCGCGGTACGTTTCA+GGG | + | chr3.4:67457303-67457322 | None:intergenic | 65.0% | |
| AGGGAGCGACTAGGGTGCAG+GGG | + | chr3.4:67457330-67457349 | None:intergenic | 65.0% | |
| CAGGGAGCGACTAGGGTGCA+GGG | + | chr3.4:67457331-67457350 | None:intergenic | 65.0% | |
| TAGCCCCCGCGGTACGTTTC+AGG | + | chr3.4:67457304-67457323 | None:intergenic | 65.0% | |
| !! | GGGCGAGGTTCTAGGGCCTT+GGG | - | chr3.4:67458086-67458105 | MS.gene04938:intron | 65.0% |
| !! | GGGGTCACCAATGGTGGGCT+AGG | + | chr3.4:67458826-67458845 | None:intergenic | 65.0% |
| !! | TGGGCGAGGTTCTAGGGCCT+TGG | - | chr3.4:67458085-67458104 | MS.gene04938:intron | 65.0% |
| GCAGGGAGCGACTAGGGTGC+AGG | + | chr3.4:67457332-67457351 | None:intergenic | 70.0% | |
| TGCAGGGGAGATAGCCCCCG+CGG | + | chr3.4:67457315-67457334 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 67456242 | 67460204 | 67456242 | ID=MS.gene04938 |
| chr3.4 | mRNA | 67456242 | 67460204 | 67456242 | ID=MS.gene04938.t1;Parent=MS.gene04938 |
| chr3.4 | exon | 67459991 | 67460204 | 67459991 | ID=MS.gene04938.t1.exon1;Parent=MS.gene04938.t1 |
| chr3.4 | CDS | 67459991 | 67460204 | 67459991 | ID=cds.MS.gene04938.t1;Parent=MS.gene04938.t1 |
| chr3.4 | exon | 67457829 | 67457919 | 67457829 | ID=MS.gene04938.t1.exon2;Parent=MS.gene04938.t1 |
| chr3.4 | CDS | 67457829 | 67457919 | 67457829 | ID=cds.MS.gene04938.t1;Parent=MS.gene04938.t1 |
| chr3.4 | exon | 67457583 | 67457726 | 67457583 | ID=MS.gene04938.t1.exon3;Parent=MS.gene04938.t1 |
| chr3.4 | CDS | 67457583 | 67457726 | 67457583 | ID=cds.MS.gene04938.t1;Parent=MS.gene04938.t1 |
| chr3.4 | exon | 67456899 | 67457016 | 67456899 | ID=MS.gene04938.t1.exon4;Parent=MS.gene04938.t1 |
| chr3.4 | CDS | 67456899 | 67457016 | 67456899 | ID=cds.MS.gene04938.t1;Parent=MS.gene04938.t1 |
| chr3.4 | exon | 67456242 | 67456382 | 67456242 | ID=MS.gene04938.t1.exon5;Parent=MS.gene04938.t1 |
| chr3.4 | CDS | 67456242 | 67456382 | 67456242 | ID=cds.MS.gene04938.t1;Parent=MS.gene04938.t1 |
| Gene Sequence |
| Protein sequence |
