Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20959.t1 | XP_024638902.1 | 98.6 | 416 | 6 | 0 | 1 | 416 | 1 | 416 | 2.60E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20959.t1 | Q9SFF6 | 69.4 | 418 | 123 | 4 | 1 | 416 | 1 | 415 | 1.9e-175 | 616.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20959.t1 | A0A396JTP5 | 98.6 | 416 | 6 | 0 | 1 | 416 | 1 | 416 | 1.9e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20959 | MS.gene49106 | PPI |
| MS.gene20959 | MS.gene061169 | PPI |
| MS.gene20959 | MS.gene071630 | PPI |
| MS.gene20959 | MS.gene34153 | PPI |
| MS.gene20959 | MS.gene006279 | PPI |
| MS.gene20959 | MS.gene21119 | PPI |
| MS.gene20926 | MS.gene20959 | PPI |
| MS.gene005408 | MS.gene20959 | PPI |
| MS.gene34152 | MS.gene20959 | PPI |
| MS.gene20959 | MS.gene061170 | PPI |
| MS.gene20959 | MS.gene072631 | PPI |
| MS.gene20959 | MS.gene07380 | PPI |
| MS.gene20959 | MS.gene49105 | PPI |
| MS.gene20959 | MS.gene050825 | PPI |
| MS.gene21120 | MS.gene20959 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20959.t1 | MTR_1g085070 | 94.484 | 417 | 7 | 2 | 1 | 416 | 1 | 402 | 0.0 | 812 |
| MS.gene20959.t1 | MTR_7g111280 | 74.641 | 418 | 103 | 2 | 1 | 415 | 1 | 418 | 0.0 | 664 |
| MS.gene20959.t1 | MTR_7g110900 | 71.925 | 374 | 105 | 0 | 42 | 415 | 41 | 414 | 0.0 | 599 |
| MS.gene20959.t1 | MTR_7g110900 | 71.733 | 375 | 106 | 0 | 42 | 416 | 41 | 415 | 0.0 | 597 |
| MS.gene20959.t1 | MTR_4g124320 | 67.780 | 419 | 121 | 2 | 2 | 415 | 11 | 420 | 0.0 | 588 |
| MS.gene20959.t1 | MTR_1g085620 | 69.867 | 375 | 113 | 0 | 42 | 416 | 29 | 403 | 0.0 | 586 |
| MS.gene20959.t1 | MTR_1g085620 | 69.799 | 298 | 90 | 0 | 119 | 416 | 1 | 298 | 3.54e-166 | 468 |
| MS.gene20959.t1 | MTR_8g072010 | 52.815 | 373 | 174 | 1 | 46 | 416 | 20 | 392 | 1.55e-157 | 450 |
| MS.gene20959.t1 | MTR_8g072000 | 49.048 | 420 | 200 | 3 | 1 | 416 | 15 | 424 | 2.92e-156 | 448 |
| MS.gene20959.t1 | MTR_8g072000 | 53.369 | 371 | 171 | 1 | 48 | 416 | 23 | 393 | 1.27e-155 | 445 |
| MS.gene20959.t1 | MTR_5g042650 | 51.639 | 366 | 171 | 2 | 48 | 411 | 24 | 385 | 1.26e-146 | 422 |
| MS.gene20959.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 1.59e-145 | 420 |
| MS.gene20959.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 1.60e-145 | 421 |
| MS.gene20959.t1 | MTR_4g124320 | 75.794 | 252 | 61 | 0 | 49 | 300 | 54 | 305 | 5.72e-145 | 416 |
| MS.gene20959.t1 | MTR_1g101020 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 3.50e-144 | 417 |
| MS.gene20959.t1 | MTR_7g060760 | 50.409 | 367 | 176 | 2 | 51 | 415 | 55 | 417 | 4.05e-140 | 407 |
| MS.gene20959.t1 | MTR_1g101000 | 53.153 | 333 | 151 | 3 | 53 | 380 | 39 | 371 | 1.10e-126 | 371 |
| MS.gene20959.t1 | MTR_1g036590 | 64.634 | 82 | 29 | 0 | 233 | 314 | 270 | 351 | 1.99e-29 | 119 |
| MS.gene20959.t1 | MTR_7g006750 | 52.128 | 94 | 45 | 0 | 192 | 285 | 467 | 560 | 4.13e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20959.t1 | AT3G05910 | 69.378 | 418 | 123 | 4 | 1 | 416 | 1 | 415 | 0.0 | 615 |
| MS.gene20959.t1 | AT5G26670 | 69.212 | 419 | 123 | 4 | 1 | 416 | 1 | 416 | 0.0 | 605 |
| MS.gene20959.t1 | AT1G57590 | 73.171 | 369 | 99 | 0 | 48 | 416 | 75 | 443 | 0.0 | 589 |
| MS.gene20959.t1 | AT3G62060 | 65.122 | 410 | 136 | 2 | 7 | 415 | 15 | 418 | 0.0 | 580 |
| MS.gene20959.t1 | AT3G62060 | 64.964 | 411 | 137 | 2 | 7 | 416 | 15 | 419 | 0.0 | 578 |
| MS.gene20959.t1 | AT2G46930 | 62.712 | 413 | 147 | 2 | 4 | 416 | 11 | 416 | 0.0 | 566 |
| MS.gene20959.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 1.89e-170 | 479 |
| MS.gene20959.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 1.89e-170 | 479 |
| MS.gene20959.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 1.89e-170 | 479 |
| MS.gene20959.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 3.81e-163 | 464 |
| MS.gene20959.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 3.81e-163 | 464 |
| MS.gene20959.t1 | AT1G09550 | 60.350 | 343 | 135 | 1 | 52 | 394 | 41 | 382 | 4.57e-159 | 454 |
| MS.gene20959.t1 | AT4G19420 | 53.000 | 400 | 151 | 2 | 53 | 415 | 25 | 424 | 2.81e-156 | 448 |
| MS.gene20959.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 2.72e-151 | 435 |
| MS.gene20959.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 2.72e-151 | 435 |
| MS.gene20959.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 7.97e-151 | 434 |
| MS.gene20959.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 1.05e-150 | 435 |
| MS.gene20959.t1 | AT3G05910 | 66.019 | 309 | 100 | 4 | 1 | 307 | 1 | 306 | 6.47e-148 | 422 |
| MS.gene20959.t1 | AT4G19410 | 51.359 | 368 | 176 | 2 | 46 | 410 | 17 | 384 | 1.16e-145 | 420 |
| MS.gene20959.t1 | AT3G09410 | 50.402 | 373 | 182 | 1 | 46 | 415 | 54 | 426 | 1.04e-144 | 419 |
| MS.gene20959.t1 | AT5G45280 | 49.457 | 368 | 183 | 2 | 46 | 410 | 17 | 384 | 7.80e-143 | 412 |
| MS.gene20959.t1 | AT4G19410 | 50.847 | 354 | 172 | 1 | 46 | 397 | 17 | 370 | 1.11e-137 | 404 |
| MS.gene20959.t1 | AT3G09405 | 49.864 | 367 | 179 | 2 | 47 | 410 | 45 | 409 | 1.93e-136 | 397 |
| MS.gene20959.t1 | AT3G09410 | 49.412 | 340 | 169 | 1 | 46 | 382 | 54 | 393 | 9.38e-127 | 372 |
| MS.gene20959.t1 | AT5G45280 | 52.055 | 292 | 138 | 1 | 43 | 332 | 14 | 305 | 2.86e-116 | 344 |
| MS.gene20959.t1 | AT3G09405 | 50.165 | 303 | 146 | 2 | 111 | 410 | 2 | 302 | 2.14e-112 | 332 |
| MS.gene20959.t1 | AT4G19420 | 58.403 | 238 | 94 | 2 | 53 | 288 | 25 | 259 | 2.55e-96 | 291 |
Find 97 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTCAGGCTCTTCTTTC+TGG | -0.013953 | 1.3:-60471945 | MS.gene20959:intron |
| TCAACCCACCTTGCAGAAAT+TGG | 0.177359 | 1.3:+60470954 | None:intergenic |
| TTTGTTTCAGTGCTTCTTTC+CGG | 0.212409 | 1.3:-60471253 | MS.gene20959:intron |
| TTGCTTAATATTCCAGTAAA+AGG | 0.219538 | 1.3:+60472619 | None:intergenic |
| TAGCAGCAGCAGATTGAATA+AGG | 0.246442 | 1.3:+60473531 | None:intergenic |
| AGAAGCTTCATGAGCTTCTA+AGG | 0.265076 | 1.3:+60473598 | None:intergenic |
| GTGAACCAGAACATTTATTA+TGG | 0.270304 | 1.3:+60470981 | None:intergenic |
| CAGCTGGCTTGTTAATTTAG+AGG | 0.278550 | 1.3:-60473011 | MS.gene20959:intron |
| CTTCTTTCTGGATGCTCAGC+TGG | 0.328684 | 1.3:-60471933 | MS.gene20959:CDS |
| CACTTCACTTTGGTAGTCCT+TGG | 0.337219 | 1.3:+60471864 | None:intergenic |
| TTAAACCATAATAAATGTTC+TGG | 0.344297 | 1.3:-60470986 | MS.gene20959:CDS |
| TTCTCAAGATCAGGTCAAAA+TGG | 0.355306 | 1.3:-60470803 | MS.gene20959:CDS |
| CGGCCGATCCCCACGGCAAT+TGG | 0.361858 | 1.3:-60471021 | MS.gene20959:CDS |
| TAAAATCTGATACAGGATTC+AGG | 0.362095 | 1.3:-60470853 | MS.gene20959:intron |
| AATTCAGAGGACAACGCATT+TGG | 0.411794 | 1.3:-60472092 | MS.gene20959:CDS |
| GTTTACCTGCCACGAGTCAT+AGG | 0.421718 | 1.3:+60471182 | None:intergenic |
| ACGTGGATCATCAAAGTTCA+TGG | 0.433128 | 1.3:-60472653 | MS.gene20959:CDS |
| TGATAGCACATGCCACCATT+TGG | 0.437780 | 1.3:-60470239 | MS.gene20959:CDS |
| GCTGACAACTCTCCTGTCAT+AGG | 0.444782 | 1.3:-60470722 | MS.gene20959:CDS |
| ATTCAATCTGCTGCTGCTAA+AGG | 0.458885 | 1.3:-60473527 | MS.gene20959:CDS |
| ACTTCACTTTGGTAGTCCTT+GGG | 0.459019 | 1.3:+60471865 | None:intergenic |
| TACCTTATCTTCACTATCCC+CGG | 0.462721 | 1.3:+60472413 | None:intergenic |
| ACGCCAATTGCCGTGGGGAT+CGG | 0.463148 | 1.3:+60471018 | None:intergenic |
| TGCGATAGACGCAAGTTCTA+CGG | 0.464930 | 1.3:+60472686 | None:intergenic |
| ATGAAGGAGCTAAGCTTGAC+TGG | 0.465960 | 1.3:+60471044 | None:intergenic |
| TTGCTCTGGCTGTTGGAGAC+TGG | 0.473165 | 1.3:-60470309 | MS.gene20959:CDS |
| CAACGGTGTTGTCACCCTAC+AGG | 0.473602 | 1.3:-60471663 | MS.gene20959:intron |
| GTGAGAGGCTTCTCAAGATC+AGG | 0.473932 | 1.3:-60470812 | MS.gene20959:CDS |
| ACGCATTTGGTTGGCTGCAG+TGG | 0.483484 | 1.3:-60472079 | MS.gene20959:CDS |
| ATCACTAAGGCACTTCACTT+TGG | 0.485245 | 1.3:+60471854 | None:intergenic |
| GTGAAGTGCCTTAGTGATGC+TGG | 0.487536 | 1.3:-60471849 | MS.gene20959:CDS |
| TAGCTGGTGGGCATACCCTC+AGG | 0.487893 | 1.3:-60471694 | MS.gene20959:CDS |
| GTGGAGGATTTGATGTCAAA+AGG | 0.488280 | 1.3:-60472060 | MS.gene20959:CDS |
| ACGGATCCGGTGCAAACAGC+TGG | 0.489904 | 1.3:-60473027 | MS.gene20959:CDS |
| CTCACCTTGTTTCCTATGAC+AGG | 0.490925 | 1.3:+60470710 | None:intergenic |
| CCGTGGGGATCGGCCGATGA+AGG | 0.493491 | 1.3:+60471028 | None:intergenic |
| TTTGATCGCGGATACGGATC+CGG | 0.495604 | 1.3:-60473040 | MS.gene20959:CDS |
| TACCGGGGATAGTGAAGATA+AGG | 0.496636 | 1.3:-60472415 | MS.gene20959:intron |
| CAGAGGACAACGCATTTGGT+TGG | 0.504022 | 1.3:-60472088 | MS.gene20959:CDS |
| TAGGCAATTGCTCTGGCTGT+TGG | 0.506232 | 1.3:-60470316 | MS.gene20959:CDS |
| TTCACTATCCCCGGTAAAAG+AGG | 0.509811 | 1.3:+60472422 | None:intergenic |
| CAGTATTAAGAATGAATAGC+GGG | 0.512415 | 1.3:+60471205 | None:intergenic |
| ACTTGTGGCTCAGCCTCACA+TGG | 0.512424 | 1.3:-60473564 | MS.gene20959:CDS |
| AGCAGCAGCAGATTGAATAA+GGG | 0.515953 | 1.3:+60473532 | None:intergenic |
| ATGTGTCTTGCCTCTCAGAT+TGG | 0.519666 | 1.3:+60470750 | None:intergenic |
| ATACTAGCAATCAAGTTCTC+CGG | 0.520958 | 1.3:+60471234 | None:intergenic |
| CATTTGGTTGGCTGCAGTGG+AGG | 0.521238 | 1.3:-60472076 | MS.gene20959:CDS |
| TTACACTGCGATGAATTTCG+AGG | 0.526633 | 1.3:-60471894 | MS.gene20959:CDS |
| GAAATAACCCAGCATCACTA+AGG | 0.526893 | 1.3:+60471841 | None:intergenic |
| CCGCGATCAAAATGATAAGC+AGG | 0.530290 | 1.3:+60473052 | None:intergenic |
| TTACAATGCAAACCCAGAAA+AGG | 0.531063 | 1.3:+60473690 | None:intergenic |
| CTTTCTGGATGCTCAGCTGG+TGG | 0.531189 | 1.3:-60471930 | MS.gene20959:CDS |
| TGCAATCACGCCAATTGCCG+TGG | 0.532481 | 1.3:+60471011 | None:intergenic |
| AACAAGCCAGCTGTTTGCAC+CGG | 0.541065 | 1.3:+60473021 | None:intergenic |
| TACTGCCTATGACTCGTGGC+AGG | 0.541796 | 1.3:-60471187 | MS.gene20959:intron |
| TGGCTCATCTGAAAACCAAA+TGG | 0.544159 | 1.3:+60470224 | None:intergenic |
| AATAATGCTCAAGAGAATCC+AGG | 0.544827 | 1.3:-60472598 | MS.gene20959:intron |
| CTCTCCTGTCATAGGAAACA+AGG | 0.552688 | 1.3:-60470714 | MS.gene20959:intron |
| AGATAAATTATTACCGAAGT+GGG | 0.554113 | 1.3:+60471387 | None:intergenic |
| TGCATTTGCATCAACCCAGT+TGG | 0.557817 | 1.3:+60473652 | None:intergenic |
| TCTGCTGCTGCTAAAGGAGC+TGG | 0.564131 | 1.3:-60473521 | MS.gene20959:intron |
| GCAATCACGCCAATTGCCGT+GGG | 0.571050 | 1.3:+60471012 | None:intergenic |
| AATTTCGAGGTCATTTCCCA+AGG | 0.572709 | 1.3:-60471881 | MS.gene20959:CDS |
| GTGGCTCAGCCTCACATGGT+TGG | 0.572897 | 1.3:-60473560 | MS.gene20959:CDS |
| GAGATAAATTATTACCGAAG+TGG | 0.579597 | 1.3:+60471386 | None:intergenic |
| GAATACAGTGTTGATGTAGC+TGG | 0.581901 | 1.3:-60471710 | MS.gene20959:intron |
| CAATATGTAGGCAATTGCTC+TGG | 0.584344 | 1.3:-60470323 | MS.gene20959:intron |
| GAAATACTGTGGCAGGGAGG+TGG | 0.587258 | 1.3:-60472721 | MS.gene20959:intron |
| CATGTGCTATCACAAGGGTA+AGG | 0.597112 | 1.3:+60470250 | None:intergenic |
| CCTTCATCGGCCGATCCCCA+CGG | 0.597346 | 1.3:-60471028 | MS.gene20959:CDS |
| GTGAAAATTCGTTACTGTGA+TGG | 0.602298 | 1.3:-60472447 | MS.gene20959:CDS |
| CAATGTCCTTAACAGCGGCT+CGG | 0.605068 | 1.3:+60470278 | None:intergenic |
| TACTGTGGCAGGGAGGTGGT+TGG | 0.606796 | 1.3:-60472717 | MS.gene20959:intron |
| TGGTGGCATGTGCTATCACA+AGG | 0.607600 | 1.3:+60470244 | None:intergenic |
| AATCTGAGAGGCAAGACACA+TGG | 0.627362 | 1.3:-60470748 | MS.gene20959:CDS |
| TAATCATCTTGATCCCACTT+CGG | 0.628050 | 1.3:-60471400 | MS.gene20959:intron |
| GTCAAGCTTAGCTCCTTCAT+CGG | 0.630234 | 1.3:-60471041 | MS.gene20959:CDS |
| TCACAAATCCAATTTCTGCA+AGG | 0.632203 | 1.3:-60470962 | MS.gene20959:intron |
| TGAAGTGCCTTAGTGATGCT+GGG | 0.640149 | 1.3:-60471848 | MS.gene20959:CDS |
| ATGTATGTGTACAACCTGCT+TGG | 0.643481 | 1.3:+60472026 | None:intergenic |
| AGGGTGATTCCAACCATGTG+AGG | 0.644329 | 1.3:+60473551 | None:intergenic |
| TTAATACTGCCTATGACTCG+TGG | 0.644352 | 1.3:-60471191 | MS.gene20959:CDS |
| GCTGCGCAGTTGCAATTCAG+AGG | 0.649968 | 1.3:-60472105 | MS.gene20959:CDS |
| TTGCTCACTGCCAATCTGAG+AGG | 0.650325 | 1.3:-60470760 | MS.gene20959:CDS |
| CTCATCTGAAAACCAAATGG+TGG | 0.655239 | 1.3:+60470227 | None:intergenic |
| AGATGATTAGTACAAACGCG+TGG | 0.666672 | 1.3:+60471414 | None:intergenic |
| TACAGGATTCAGGAATCACA+TGG | 0.672670 | 1.3:-60470843 | MS.gene20959:intron |
| GCAGTATTAAGAATGAATAG+CGG | 0.673265 | 1.3:+60471204 | None:intergenic |
| TATCGCAAGACAACACGACG+TGG | 0.673334 | 1.3:-60472670 | MS.gene20959:CDS |
| TACAGTGTTGATGTAGCTGG+TGG | 0.678330 | 1.3:-60471707 | MS.gene20959:intron |
| CACATGGTGAATGTTGTGAG+AGG | 0.686276 | 1.3:-60470827 | MS.gene20959:CDS |
| ACAATCAATGTCCTTAACAG+CGG | 0.695254 | 1.3:+60470273 | None:intergenic |
| AACCCAGAAAAGGTTCACCA+TGG | 0.700911 | 1.3:+60473700 | None:intergenic |
| CAATCACGCCAATTGCCGTG+GGG | 0.703508 | 1.3:+60471013 | None:intergenic |
| ACAGTGTTGATGTAGCTGGT+GGG | 0.721028 | 1.3:-60471706 | MS.gene20959:intron |
| AGTATTAAGAATGAATAGCG+GGG | 0.730636 | 1.3:+60471206 | None:intergenic |
| GGTGGCATGTGCTATCACAA+GGG | 0.739938 | 1.3:+60470245 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTAATTAATATA+TGG | - | chr1.3:60470963-60470982 | MS.gene20959:CDS | 0.0% |
| !!! | ATACTTAATTAATTTGTTTT+TGG | - | chr1.3:60470828-60470847 | MS.gene20959:CDS | 10.0% |
| !! | AGGTTTAGTTAAAATATTAT+AGG | - | chr1.3:60473257-60473276 | MS.gene20959:intron | 15.0% |
| !! | ATCATAAAATACGATTTATT+CGG | + | chr1.3:60472799-60472818 | None:intergenic | 15.0% |
| !!! | AACAATTAGGAATTAATTTT+AGG | + | chr1.3:60472188-60472207 | None:intergenic | 15.0% |
| !!! | AACATTTTTTATAACAAAGA+AGG | + | chr1.3:60470447-60470466 | None:intergenic | 15.0% |
| !! | AAATCATGTGATAATAATGA+TGG | + | chr1.3:60472160-60472179 | None:intergenic | 20.0% |
| !! | AGGAAAAAGATATTACTAAA+AGG | + | chr1.3:60472654-60472673 | None:intergenic | 20.0% |
| !! | ATTTAACTAAAATCTGATAC+AGG | - | chr1.3:60473066-60473085 | MS.gene20959:CDS | 20.0% |
| !! | TAAAAAAATCTGCAATCATA+CGG | + | chr1.3:60471448-60471467 | None:intergenic | 20.0% |
| !! | TCAATATGTTCATATTGTAA+AGG | - | chr1.3:60471001-60471020 | MS.gene20959:CDS | 20.0% |
| !! | TTAAACCATAATAAATGTTC+TGG | - | chr1.3:60472940-60472959 | MS.gene20959:intron | 20.0% |
| !! | TTTACAATATGAACATATTG+AGG | + | chr1.3:60471002-60471021 | None:intergenic | 20.0% |
| !!! | GAATATTTTATAGCAAAAAC+AGG | + | chr1.3:60473364-60473383 | None:intergenic | 20.0% |
| !!! | TAAACATCTTATTTCTAACT+CGG | - | chr1.3:60472762-60472781 | MS.gene20959:intron | 20.0% |
| !!! | TGAGTTAAAGATTTCTTTTT+TGG | + | chr1.3:60470767-60470786 | None:intergenic | 20.0% |
| !!! | TTTGCTATAAAATATTCACA+TGG | - | chr1.3:60473367-60473386 | MS.gene20959:intron | 20.0% |
| ! | ACAGATAATATTCAGAAATC+AGG | + | chr1.3:60471793-60471812 | None:intergenic | 25.0% |
| ! | AGATAAATTATTACCGAAGT+GGG | + | chr1.3:60472542-60472561 | None:intergenic | 25.0% |
| ! | AGTTTATATGGCTTAAAACT+TGG | - | chr1.3:60472397-60472416 | MS.gene20959:intron | 25.0% |
| ! | ATAACAAAGAAGGTTAGAAA+TGG | + | chr1.3:60470437-60470456 | None:intergenic | 25.0% |
| ! | ATAGCCAACTTTATTCATTA+AGG | - | chr1.3:60471555-60471574 | MS.gene20959:intron | 25.0% |
| ! | ATCTGAACAATAATTAACGA+TGG | + | chr1.3:60472627-60472646 | None:intergenic | 25.0% |
| ! | CACATGCTAAATAGTTTATA+TGG | - | chr1.3:60472385-60472404 | MS.gene20959:intron | 25.0% |
| ! | GAAACCTTAATGAATAAAGT+TGG | + | chr1.3:60471562-60471581 | None:intergenic | 25.0% |
| ! | GATATTTAAGTGAAATACTG+TGG | - | chr1.3:60471194-60471213 | MS.gene20959:CDS | 25.0% |
| ! | GTTTCATTTGAATGAATTTG+AGG | - | chr1.3:60472588-60472607 | MS.gene20959:intron | 25.0% |
| ! | TAACCTTATATAAAGCATGA+TGG | - | chr1.3:60472438-60472457 | MS.gene20959:CDS | 25.0% |
| ! | TACATATTGTCAATGCATAA+GGG | + | chr1.3:60473592-60473611 | None:intergenic | 25.0% |
| ! | TACTCAAATTATGCTGAAAA+AGG | - | chr1.3:60471393-60471412 | MS.gene20959:intron | 25.0% |
| ! | TAGAATGAAATACTGAAGTT+AGG | + | chr1.3:60472125-60472144 | None:intergenic | 25.0% |
| ! | TAGTCGATCTATTTAATGTA+GGG | - | chr1.3:60471755-60471774 | MS.gene20959:intron | 25.0% |
| ! | TGAATATTATCTGTTGACAT+AGG | - | chr1.3:60471799-60471818 | MS.gene20959:intron | 25.0% |
| ! | TGTTTGTTTGATTGAAAGTT+AGG | - | chr1.3:60471637-60471656 | MS.gene20959:intron | 25.0% |
| ! | TTAGTCGATCTATTTAATGT+AGG | - | chr1.3:60471754-60471773 | MS.gene20959:intron | 25.0% |
| ! | TTATTCATTAAGGTTTCCAT+AGG | - | chr1.3:60471565-60471584 | MS.gene20959:intron | 25.0% |
| ! | TTCACATGGAGAAAAATTAT+AGG | - | chr1.3:60473381-60473400 | MS.gene20959:intron | 25.0% |
| ! | TTGCTTAATATTCCAGTAAA+AGG | + | chr1.3:60471310-60471329 | None:intergenic | 25.0% |
| !! | AAATCGTATTTTATGATCTG+TGG | - | chr1.3:60472802-60472821 | MS.gene20959:intron | 25.0% |
| !! | TGTGATAATAATGATGGAAA+TGG | + | chr1.3:60472154-60472173 | None:intergenic | 25.0% |
| !!! | AAAGGATTTGCTTAACTTTT+TGG | - | chr1.3:60471411-60471430 | MS.gene20959:CDS | 25.0% |
| !!! | ATTTTAACTAAACCTGCATA+GGG | + | chr1.3:60473252-60473271 | None:intergenic | 25.0% |
| !!! | TAAATCTGTAGCTTTTGATT+TGG | - | chr1.3:60470793-60470812 | MS.gene20959:CDS | 25.0% |
| !!! | TACTGCACTTTTTTTTTCTT+GGG | - | chr1.3:60472286-60472305 | MS.gene20959:intron | 25.0% |
| !!! | TATTTTAACTAAACCTGCAT+AGG | + | chr1.3:60473253-60473272 | None:intergenic | 25.0% |
| !!! | TCTTAGTTTAAAGTGTTGTT+GGG | - | chr1.3:60471059-60471078 | MS.gene20959:intron | 25.0% |
| !!! | TGATTGCAGATTTTTTTAAC+TGG | - | chr1.3:60471450-60471469 | MS.gene20959:intron | 25.0% |
| !!! | TTCTTAGTTTAAAGTGTTGT+TGG | - | chr1.3:60471058-60471077 | MS.gene20959:intron | 25.0% |
| AACTGTATGAATGATGCATA+AGG | - | chr1.3:60471688-60471707 | MS.gene20959:CDS | 30.0% | |
| AATACGATTTATTCGGAGTT+TGG | + | chr1.3:60472792-60472811 | None:intergenic | 30.0% | |
| ACATACATAACATGGCAAAT+TGG | + | chr1.3:60470690-60470709 | None:intergenic | 30.0% | |
| AGCAGTGTCATGAAAAATAA+TGG | + | chr1.3:60473471-60473490 | None:intergenic | 30.0% | |
| AGTATTAAGAATGAATAGCG+GGG | + | chr1.3:60472723-60472742 | None:intergenic | 30.0% | |
| ATACATAACATGGCAAATTG+GGG | + | chr1.3:60470688-60470707 | None:intergenic | 30.0% | |
| CAACCATCATGCTTTATATA+AGG | + | chr1.3:60472444-60472463 | None:intergenic | 30.0% | |
| CAGTATTAAGAATGAATAGC+GGG | + | chr1.3:60472724-60472743 | None:intergenic | 30.0% | |
| CATACATAACATGGCAAATT+GGG | + | chr1.3:60470689-60470708 | None:intergenic | 30.0% | |
| CTACATATTGTCAATGCATA+AGG | + | chr1.3:60473593-60473612 | None:intergenic | 30.0% | |
| GAGATAAATTATTACCGAAG+TGG | + | chr1.3:60472543-60472562 | None:intergenic | 30.0% | |
| GCAGTATTAAGAATGAATAG+CGG | + | chr1.3:60472725-60472744 | None:intergenic | 30.0% | |
| GTGAACCAGAACATTTATTA+TGG | + | chr1.3:60472948-60472967 | None:intergenic | 30.0% | |
| TAAAATCTGATACAGGATTC+AGG | - | chr1.3:60473073-60473092 | MS.gene20959:CDS | 30.0% | |
| TCACATTCACATACATAACA+TGG | + | chr1.3:60470698-60470717 | None:intergenic | 30.0% | |
| TTTCAGCAACAAAACTTCAA+AGG | + | chr1.3:60470640-60470659 | None:intergenic | 30.0% | |
| ! | AAATAATGGAATCATCACTG+CGG | + | chr1.3:60473457-60473476 | None:intergenic | 30.0% |
| ! | AGCAATACATGACATGTTTT+TGG | + | chr1.3:60471113-60471132 | None:intergenic | 30.0% |
| ! | CTTATGCATTGACAATATGT+AGG | - | chr1.3:60473591-60473610 | MS.gene20959:CDS | 30.0% |
| ! | TTCTTCTTTTTCTTCACTTG+TGG | - | chr1.3:60470347-60470366 | MS.gene20959:intron | 30.0% |
| ! | TTTACAACTTTGTTTCCTTC+AGG | - | chr1.3:60471968-60471987 | MS.gene20959:intron | 30.0% |
| !! | ATATTTTTGCACTCATTGCA+GGG | - | chr1.3:60472473-60472492 | MS.gene20959:intron | 30.0% |
| !! | CTTAGTTTAAAGTGTTGTTG+GGG | - | chr1.3:60471060-60471079 | MS.gene20959:intron | 30.0% |
| !! | TATATTTTTGCACTCATTGC+AGG | - | chr1.3:60472472-60472491 | MS.gene20959:intron | 30.0% |
| !!! | GTACTGCACTTTTTTTTTCT+TGG | - | chr1.3:60472285-60472304 | MS.gene20959:intron | 30.0% |
| AAATCCAATTTCTGCAAGGT+GGG | - | chr1.3:60472968-60472987 | MS.gene20959:intron | 35.0% | |
| AATAATGCTCAAGAGAATCC+AGG | - | chr1.3:60471328-60471347 | MS.gene20959:intron | 35.0% | |
| AATATTATAGGTTTCCGTGC+TGG | - | chr1.3:60473269-60473288 | MS.gene20959:intron | 35.0% | |
| ACAATCAATGTCCTTAACAG+CGG | + | chr1.3:60473656-60473675 | None:intergenic | 35.0% | |
| ACCGTTGAAAAAATTCCTGA+GGG | + | chr1.3:60472250-60472269 | None:intergenic | 35.0% | |
| AGGATGACAAGTCTTTCTAT+TGG | - | chr1.3:60471021-60471040 | MS.gene20959:CDS | 35.0% | |
| ATACTAGCAATCAAGTTCTC+CGG | + | chr1.3:60472695-60472714 | None:intergenic | 35.0% | |
| CTACATCAACACTGTATTCA+GGG | + | chr1.3:60472215-60472234 | None:intergenic | 35.0% | |
| GTGAAAATTCGTTACTGTGA+TGG | - | chr1.3:60471479-60471498 | MS.gene20959:intron | 35.0% | |
| GTTTCAGTTGAATGAAAACC+TGG | + | chr1.3:60471349-60471368 | None:intergenic | 35.0% | |
| TAAAACTTGGTCATTTGGCA+TGG | - | chr1.3:60472410-60472429 | MS.gene20959:intron | 35.0% | |
| TAATCATCTTGATCCCACTT+CGG | - | chr1.3:60472526-60472545 | MS.gene20959:intron | 35.0% | |
| TACATAACATGGCAAATTGG+GGG | + | chr1.3:60470687-60470706 | None:intergenic | 35.0% | |
| TACATCAACACTGTATTCAG+GGG | + | chr1.3:60472214-60472233 | None:intergenic | 35.0% | |
| TATTCAGGGGGAAAACAATT+AGG | + | chr1.3:60472201-60472220 | None:intergenic | 35.0% | |
| TCAAGTGAAAGAAAGATCCA+TGG | + | chr1.3:60472327-60472346 | None:intergenic | 35.0% | |
| TCACAAATCCAATTTCTGCA+AGG | - | chr1.3:60472964-60472983 | MS.gene20959:intron | 35.0% | |
| TGGCTTAAAACTTGGTCATT+TGG | - | chr1.3:60472405-60472424 | MS.gene20959:intron | 35.0% | |
| TTAAGTGAAATACTGTGGCA+GGG | - | chr1.3:60471199-60471218 | MS.gene20959:CDS | 35.0% | |
| TTACAATGCAAACCCAGAAA+AGG | + | chr1.3:60470239-60470258 | None:intergenic | 35.0% | |
| TTCTCAAGATCAGGTCAAAA+TGG | - | chr1.3:60473123-60473142 | MS.gene20959:intron | 35.0% | |
| TTTAAGTGAAATACTGTGGC+AGG | - | chr1.3:60471198-60471217 | MS.gene20959:CDS | 35.0% | |
| TTTGTTTCAGTGCTTCTTTC+CGG | - | chr1.3:60472673-60472692 | MS.gene20959:CDS | 35.0% | |
| ! | AAAAAAAGTGCAGTACCTGT+AGG | + | chr1.3:60472281-60472300 | None:intergenic | 35.0% |
| ! | AAAAAAGTGCAGTACCTGTA+GGG | + | chr1.3:60472280-60472299 | None:intergenic | 35.0% |
| ! | ATAATTAACGATGGAGCACT+TGG | + | chr1.3:60472618-60472637 | None:intergenic | 35.0% |
| ! | GAAAAAGCGATACCTTTTAC+TGG | - | chr1.3:60471295-60471314 | MS.gene20959:intron | 35.0% |
| ! | TTCTTGGGATCATTCTGTTT+TGG | - | chr1.3:60472301-60472320 | MS.gene20959:intron | 35.0% |
| !! | TATCATTTTGATCGCGGATA+CGG | - | chr1.3:60470880-60470899 | MS.gene20959:intron | 35.0% |
| !!! | ACCCTCAGGAATTTTTTCAA+CGG | - | chr1.3:60472246-60472265 | MS.gene20959:intron | 35.0% |
| !!! | TTTGTTTTTGGCAGTCTGTT+TGG | - | chr1.3:60470840-60470859 | MS.gene20959:CDS | 35.0% |
| AATATAACCGCATACCAGCA+CGG | + | chr1.3:60473286-60473305 | None:intergenic | 40.0% | |
| AATTCAGAGGACAACGCATT+TGG | - | chr1.3:60471834-60471853 | MS.gene20959:CDS | 40.0% | |
| AATTTCGAGGTCATTTCCCA+AGG | - | chr1.3:60472045-60472064 | MS.gene20959:CDS | 40.0% | |
| ACATCAACACTGTATTCAGG+GGG | + | chr1.3:60472213-60472232 | None:intergenic | 40.0% | |
| ACGTGGATCATCAAAGTTCA+TGG | - | chr1.3:60471273-60471292 | MS.gene20959:intron | 40.0% | |
| ACTACATCTAACACTAGCAG+AGG | + | chr1.3:60471596-60471615 | None:intergenic | 40.0% | |
| AGAAGCTTCATGAGCTTCTA+AGG | + | chr1.3:60470331-60470350 | None:intergenic | 40.0% | |
| AGATGATTAGTACAAACGCG+TGG | + | chr1.3:60472515-60472534 | None:intergenic | 40.0% | |
| AGCAGCAGCAGATTGAATAA+GGG | + | chr1.3:60470397-60470416 | None:intergenic | 40.0% | |
| AGTTTCACATATCCCTATGC+AGG | - | chr1.3:60473237-60473256 | MS.gene20959:intron | 40.0% | |
| ATGTATGTGTACAACCTGCT+TGG | + | chr1.3:60471903-60471922 | None:intergenic | 40.0% | |
| ATTCAATCTGCTGCTGCTAA+AGG | - | chr1.3:60470399-60470418 | MS.gene20959:intron | 40.0% | |
| CAAATCCAATTTCTGCAAGG+TGG | - | chr1.3:60472967-60472986 | MS.gene20959:intron | 40.0% | |
| CAATATGTAGGCAATTGCTC+TGG | - | chr1.3:60473603-60473622 | MS.gene20959:CDS | 40.0% | |
| CACCGTTGAAAAAATTCCTG+AGG | + | chr1.3:60472251-60472270 | None:intergenic | 40.0% | |
| GAAATAACCCAGCATCACTA+AGG | + | chr1.3:60472088-60472107 | None:intergenic | 40.0% | |
| GCTACATCAACACTGTATTC+AGG | + | chr1.3:60472216-60472235 | None:intergenic | 40.0% | |
| GTGGAGGATTTGATGTCAAA+AGG | - | chr1.3:60471866-60471885 | MS.gene20959:CDS | 40.0% | |
| TACAGGATTCAGGAATCACA+TGG | - | chr1.3:60473083-60473102 | MS.gene20959:intron | 40.0% | |
| TACCTTATCTTCACTATCCC+CGG | + | chr1.3:60471516-60471535 | None:intergenic | 40.0% | |
| TAGCAGCAGCAGATTGAATA+AGG | + | chr1.3:60470398-60470417 | None:intergenic | 40.0% | |
| TTAATACTGCCTATGACTCG+TGG | - | chr1.3:60472735-60472754 | MS.gene20959:intron | 40.0% | |
| TTACACTGCGATGAATTTCG+AGG | - | chr1.3:60472032-60472051 | MS.gene20959:intron | 40.0% | |
| ! | ACTTCACTTTGGTAGTCCTT+GGG | + | chr1.3:60472064-60472083 | None:intergenic | 40.0% |
| ! | ATCACTAAGGCACTTCACTT+TGG | + | chr1.3:60472075-60472094 | None:intergenic | 40.0% |
| !! | AGCACTTGTTTTCACCAACT+GGG | - | chr1.3:60470260-60470279 | MS.gene20959:CDS | 40.0% |
| !! | CAGCTGGCTTGTTAATTTAG+AGG | - | chr1.3:60470915-60470934 | MS.gene20959:intron | 40.0% |
| !! | CCTGCTTATCATTTTGATCG+CGG | - | chr1.3:60470874-60470893 | MS.gene20959:intron | 40.0% |
| !! | GAATACAGTGTTGATGTAGC+TGG | - | chr1.3:60472216-60472235 | MS.gene20959:intron | 40.0% |
| !! | GGAAAGAAGCACTGAAACAA+AGG | + | chr1.3:60472674-60472693 | None:intergenic | 40.0% |
| !! | TAGCACTTGTTTTCACCAAC+TGG | - | chr1.3:60470259-60470278 | MS.gene20959:CDS | 40.0% |
| !! | TTGACCAACTCAGCTTTGTT+TGG | - | chr1.3:60470732-60470751 | MS.gene20959:CDS | 40.0% |
| !! | TTTTTGGCAGTCTGTTTGGA+TGG | - | chr1.3:60470844-60470863 | MS.gene20959:intron | 40.0% |
| AATCTGAGAGGCAAGACACA+TGG | - | chr1.3:60473178-60473197 | MS.gene20959:intron | 45.0% | |
| ACAGCCAAACAAAGCTGAGT+TGG | + | chr1.3:60470739-60470758 | None:intergenic | 45.0% | |
| ATCCAGAAAGAAGAGCCTGA+AGG | + | chr1.3:60471986-60472005 | None:intergenic | 45.0% | |
| ATGAAGGAGCTAAGCTTGAC+TGG | + | chr1.3:60472885-60472904 | None:intergenic | 45.0% | |
| ATGTGTCTTGCCTCTCAGAT+TGG | + | chr1.3:60473179-60473198 | None:intergenic | 45.0% | |
| CACATGGTGAATGTTGTGAG+AGG | - | chr1.3:60473099-60473118 | MS.gene20959:intron | 45.0% | |
| CATGTGCTATCACAAGGGTA+AGG | + | chr1.3:60473679-60473698 | None:intergenic | 45.0% | |
| CCGCGATCAAAATGATAAGC+AGG | + | chr1.3:60470877-60470896 | None:intergenic | 45.0% | |
| CTCTCCTGTCATAGGAAACA+AGG | - | chr1.3:60473212-60473231 | MS.gene20959:intron | 45.0% | |
| GTCAAGCTTAGCTCCTTCAT+CGG | - | chr1.3:60472885-60472904 | MS.gene20959:intron | 45.0% | |
| TACCGGGGATAGTGAAGATA+AGG | - | chr1.3:60471511-60471530 | MS.gene20959:intron | 45.0% | |
| TATTCCCAACGCTACTTCCT+CGG | - | chr1.3:60471149-60471168 | MS.gene20959:intron | 45.0% | |
| TCAACCCACCTTGCAGAAAT+TGG | + | chr1.3:60472975-60472994 | None:intergenic | 45.0% | |
| TGATAGCACATGCCACCATT+TGG | - | chr1.3:60473687-60473706 | MS.gene20959:CDS | 45.0% | |
| TGCATTTGCATCAACCCAGT+TGG | + | chr1.3:60470277-60470296 | None:intergenic | 45.0% | |
| TGCGATAGACGCAAGTTCTA+CGG | + | chr1.3:60471243-60471262 | None:intergenic | 45.0% | |
| TTCACTATCCCCGGTAAAAG+AGG | + | chr1.3:60471507-60471526 | None:intergenic | 45.0% | |
| TTCCTTCAGGCTCTTCTTTC+TGG | - | chr1.3:60471981-60472000 | MS.gene20959:intron | 45.0% | |
| ! | ACTAGCAGAGGTGTAACCTA+TGG | + | chr1.3:60471584-60471603 | None:intergenic | 45.0% |
| ! | CACTTCACTTTGGTAGTCCT+TGG | + | chr1.3:60472065-60472084 | None:intergenic | 45.0% |
| ! | CTCACCTTGTTTCCTATGAC+AGG | + | chr1.3:60473219-60473238 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTAGTGATGCT+GGG | - | chr1.3:60472078-60472097 | MS.gene20959:CDS | 45.0% |
| !! | ACAGTGTTGATGTAGCTGGT+GGG | - | chr1.3:60472220-60472239 | MS.gene20959:intron | 45.0% |
| !! | TACAGTGTTGATGTAGCTGG+TGG | - | chr1.3:60472219-60472238 | MS.gene20959:intron | 45.0% |
| !! | TGTGATGGTGCCTCTTTTAC+CGG | - | chr1.3:60471494-60471513 | MS.gene20959:intron | 45.0% |
| !!! | GGATCATTCTGTTTTGGCCA+TGG | - | chr1.3:60472307-60472326 | MS.gene20959:intron | 45.0% |
| !!! | GGGGACACACTTTTTTGTGA+AGG | - | chr1.3:60471079-60471098 | MS.gene20959:intron | 45.0% |
| !! | AATTAATTATCAATTAAAAA+TGG | - | chr1.3:60470591-60470610 | MS.gene20959:intron | 5.0% |
| !! | TTATTATTATTTATTTATTC+AGG | + | chr1.3:60473318-60473337 | None:intergenic | 5.0% |
| AACAAGCCAGCTGTTTGCAC+CGG | + | chr1.3:60470908-60470927 | None:intergenic | 50.0% | |
| AGGGTGATTCCAACCATGTG+AGG | + | chr1.3:60470378-60470397 | None:intergenic | 50.0% | |
| AGTGAAATACTGTGGCAGGG+AGG | - | chr1.3:60471202-60471221 | MS.gene20959:CDS | 50.0% | |
| ATGTTTGTATAGCACCGCCG+AGG | + | chr1.3:60471169-60471188 | None:intergenic | 50.0% | |
| CAATGTCCTTAACAGCGGCT+CGG | + | chr1.3:60473651-60473670 | None:intergenic | 50.0% | |
| CAGAGGACAACGCATTTGGT+TGG | - | chr1.3:60471838-60471857 | MS.gene20959:CDS | 50.0% | |
| CTTCTTTCTGGATGCTCAGC+TGG | - | chr1.3:60471993-60472012 | MS.gene20959:intron | 50.0% | |
| GCTGACAACTCTCCTGTCAT+AGG | - | chr1.3:60473204-60473223 | MS.gene20959:intron | 50.0% | |
| GGTGGCATGTGCTATCACAA+GGG | + | chr1.3:60473684-60473703 | None:intergenic | 50.0% | |
| GTGAGAGGCTTCTCAAGATC+AGG | - | chr1.3:60473114-60473133 | MS.gene20959:intron | 50.0% | |
| GTTTACCTGCCACGAGTCAT+AGG | + | chr1.3:60472747-60472766 | None:intergenic | 50.0% | |
| TAGGCAATTGCTCTGGCTGT+TGG | - | chr1.3:60473610-60473629 | MS.gene20959:CDS | 50.0% | |
| TATCGCAAGACAACACGACG+TGG | - | chr1.3:60471256-60471275 | MS.gene20959:intron | 50.0% | |
| TGGTGGCATGTGCTATCACA+AGG | + | chr1.3:60473685-60473704 | None:intergenic | 50.0% | |
| TTGCTCACTGCCAATCTGAG+AGG | - | chr1.3:60473166-60473185 | MS.gene20959:intron | 50.0% | |
| TTTGATCGCGGATACGGATC+CGG | - | chr1.3:60470886-60470905 | MS.gene20959:intron | 50.0% | |
| ! | AGGAATGCGTTTTGCCAAGC+AGG | - | chr1.3:60471886-60471905 | MS.gene20959:CDS | 50.0% |
| ! | GTGAAGTGCCTTAGTGATGC+TGG | - | chr1.3:60472077-60472096 | MS.gene20959:CDS | 50.0% |
| ! | TAGGTTTCCGTGCTGGTATG+CGG | - | chr1.3:60473276-60473295 | MS.gene20959:intron | 50.0% |
| ! | TTTTGACCGAGCCGCTGTTA+AGG | - | chr1.3:60473642-60473661 | MS.gene20959:CDS | 50.0% |
| !! | GTGATGGTGCCTCTTTTACC+GGG | - | chr1.3:60471495-60471514 | MS.gene20959:intron | 50.0% |
| !! | TGATGGTGCCTCTTTTACCG+GGG | - | chr1.3:60471496-60471515 | MS.gene20959:intron | 50.0% |
| ACTTGTGGCTCAGCCTCACA+TGG | - | chr1.3:60470362-60470381 | MS.gene20959:intron | 55.0% | |
| CAATCACGCCAATTGCCGTG+GGG | + | chr1.3:60472916-60472935 | None:intergenic | 55.0% | |
| CTTTCTGGATGCTCAGCTGG+TGG | - | chr1.3:60471996-60472015 | MS.gene20959:intron | 55.0% | |
| GAAATACTGTGGCAGGGAGG+TGG | - | chr1.3:60471205-60471224 | MS.gene20959:CDS | 55.0% | |
| GCAATCACGCCAATTGCCGT+GGG | + | chr1.3:60472917-60472936 | None:intergenic | 55.0% | |
| GCTGCGCAGTTGCAATTCAG+AGG | - | chr1.3:60471821-60471840 | MS.gene20959:intron | 55.0% | |
| TACTGCCTATGACTCGTGGC+AGG | - | chr1.3:60472739-60472758 | MS.gene20959:intron | 55.0% | |
| TCTGCTGCTGCTAAAGGAGC+TGG | - | chr1.3:60470405-60470424 | MS.gene20959:intron | 55.0% | |
| TGCAATCACGCCAATTGCCG+TGG | + | chr1.3:60472918-60472937 | None:intergenic | 55.0% | |
| TTGCTCTGGCTGTTGGAGAC+TGG | - | chr1.3:60473617-60473636 | MS.gene20959:CDS | 55.0% | |
| ! | ACGCATTTGGTTGGCTGCAG+TGG | - | chr1.3:60471847-60471866 | MS.gene20959:CDS | 55.0% |
| ! | CATTTGGTTGGCTGCAGTGG+AGG | - | chr1.3:60471850-60471869 | MS.gene20959:CDS | 55.0% |
| !! | CAACGGTGTTGTCACCCTAC+AGG | - | chr1.3:60472263-60472282 | MS.gene20959:intron | 55.0% |
| ACCGCCGAGGAAGTAGCGTT+GGG | + | chr1.3:60471156-60471175 | None:intergenic | 60.0% | |
| ACGCCAATTGCCGTGGGGAT+CGG | + | chr1.3:60472911-60472930 | None:intergenic | 60.0% | |
| ACGGATCCGGTGCAAACAGC+TGG | - | chr1.3:60470899-60470918 | MS.gene20959:intron | 60.0% | |
| GTGGCTCAGCCTCACATGGT+TGG | - | chr1.3:60470366-60470385 | MS.gene20959:intron | 60.0% | |
| TACTGTGGCAGGGAGGTGGT+TGG | - | chr1.3:60471209-60471228 | MS.gene20959:CDS | 60.0% | |
| TCCCAACGCTACTTCCTCGG+CGG | - | chr1.3:60471152-60471171 | MS.gene20959:intron | 60.0% | |
| ! | TAGCTGGTGGGCATACCCTC+AGG | - | chr1.3:60472232-60472251 | MS.gene20959:intron | 60.0% |
| CACCGCCGAGGAAGTAGCGT+TGG | + | chr1.3:60471157-60471176 | None:intergenic | 65.0% | |
| CCTTCATCGGCCGATCCCCA+CGG | - | chr1.3:60472898-60472917 | MS.gene20959:intron | 65.0% | |
| CCGTGGGGATCGGCCGATGA+AGG | + | chr1.3:60472901-60472920 | None:intergenic | 70.0% | |
| CGGCCGATCCCCACGGCAAT+TGG | - | chr1.3:60472905-60472924 | MS.gene20959:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60470228 | 60473720 | 60470228 | ID=MS.gene20959 |
| chr1.3 | mRNA | 60470228 | 60473720 | 60470228 | ID=MS.gene20959.t1;Parent=MS.gene20959 |
| chr1.3 | exon | 60473522 | 60473720 | 60473522 | ID=MS.gene20959.t1.exon1;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60473522 | 60473720 | 60473522 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60473012 | 60473094 | 60473012 | ID=MS.gene20959.t1.exon2;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60473012 | 60473094 | 60473012 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60472599 | 60472728 | 60472599 | ID=MS.gene20959.t1.exon3;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60472599 | 60472728 | 60472599 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60472416 | 60472489 | 60472416 | ID=MS.gene20959.t1.exon4;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60472416 | 60472489 | 60472416 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60472041 | 60472127 | 60472041 | ID=MS.gene20959.t1.exon5;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60472041 | 60472127 | 60472041 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60471834 | 60471958 | 60471834 | ID=MS.gene20959.t1.exon6;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60471834 | 60471958 | 60471834 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60471664 | 60471724 | 60471664 | ID=MS.gene20959.t1.exon7;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60471664 | 60471724 | 60471664 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60471401 | 60471454 | 60471401 | ID=MS.gene20959.t1.exon8;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60471401 | 60471454 | 60471401 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60471188 | 60471265 | 60471188 | ID=MS.gene20959.t1.exon9;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60471188 | 60471265 | 60471188 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60470963 | 60471068 | 60470963 | ID=MS.gene20959.t1.exon10;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60470963 | 60471068 | 60470963 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60470715 | 60470860 | 60470715 | ID=MS.gene20959.t1.exon11;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60470715 | 60470860 | 60470715 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| chr1.3 | exon | 60470228 | 60470335 | 60470228 | ID=MS.gene20959.t1.exon12;Parent=MS.gene20959.t1 |
| chr1.3 | CDS | 60470228 | 60470335 | 60470228 | ID=cds.MS.gene20959.t1;Parent=MS.gene20959.t1 |
| Gene Sequence |
| Protein sequence |
