Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21087.t1 | XP_024638902.1 | 98.1 | 416 | 8 | 0 | 1 | 416 | 1 | 416 | 2.90E-247 | 864 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21087.t1 | Q9SFF6 | 69.4 | 418 | 123 | 4 | 1 | 416 | 1 | 415 | 3.3e-175 | 615.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21087.t1 | A0A396JTP5 | 98.1 | 416 | 8 | 0 | 1 | 416 | 1 | 416 | 2.1e-247 | 864.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21087 | MS.gene006279 | PPI |
| MS.gene21120 | MS.gene21087 | PPI |
| MS.gene21087 | MS.gene21119 | PPI |
| MS.gene21087 | MS.gene072631 | PPI |
| MS.gene21087 | MS.gene061170 | PPI |
| MS.gene21087 | MS.gene050825 | PPI |
| MS.gene21087 | MS.gene07380 | PPI |
| MS.gene21087 | MS.gene49105 | PPI |
| MS.gene21087 | MS.gene49106 | PPI |
| MS.gene21087 | MS.gene061169 | PPI |
| MS.gene21087 | MS.gene071630 | PPI |
| MS.gene20926 | MS.gene21087 | PPI |
| MS.gene005408 | MS.gene21087 | PPI |
| MS.gene34152 | MS.gene21087 | PPI |
| MS.gene21087 | MS.gene34153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21087.t1 | MTR_1g085070 | 94.005 | 417 | 9 | 2 | 1 | 416 | 1 | 402 | 0.0 | 809 |
| MS.gene21087.t1 | MTR_7g111280 | 74.641 | 418 | 103 | 2 | 1 | 415 | 1 | 418 | 0.0 | 663 |
| MS.gene21087.t1 | MTR_7g110900 | 71.925 | 374 | 105 | 0 | 42 | 415 | 41 | 414 | 0.0 | 598 |
| MS.gene21087.t1 | MTR_7g110900 | 71.733 | 375 | 106 | 0 | 42 | 416 | 41 | 415 | 0.0 | 597 |
| MS.gene21087.t1 | MTR_4g124320 | 67.874 | 414 | 129 | 2 | 2 | 415 | 11 | 420 | 0.0 | 587 |
| MS.gene21087.t1 | MTR_1g085620 | 69.867 | 375 | 113 | 0 | 42 | 416 | 29 | 403 | 0.0 | 585 |
| MS.gene21087.t1 | MTR_1g085620 | 69.799 | 298 | 90 | 0 | 119 | 416 | 1 | 298 | 4.60e-166 | 468 |
| MS.gene21087.t1 | MTR_8g072010 | 52.815 | 373 | 174 | 1 | 46 | 416 | 20 | 392 | 2.90e-157 | 450 |
| MS.gene21087.t1 | MTR_8g072000 | 49.048 | 420 | 200 | 3 | 1 | 416 | 15 | 424 | 1.02e-155 | 446 |
| MS.gene21087.t1 | MTR_8g072000 | 53.369 | 371 | 171 | 1 | 48 | 416 | 23 | 393 | 2.62e-155 | 444 |
| MS.gene21087.t1 | MTR_5g042650 | 51.639 | 366 | 171 | 2 | 48 | 411 | 24 | 385 | 3.11e-146 | 421 |
| MS.gene21087.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 1.91e-145 | 420 |
| MS.gene21087.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 2.92e-145 | 420 |
| MS.gene21087.t1 | MTR_4g124320 | 75.794 | 252 | 61 | 0 | 49 | 300 | 54 | 305 | 1.23e-144 | 415 |
| MS.gene21087.t1 | MTR_1g101020 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 8.56e-144 | 416 |
| MS.gene21087.t1 | MTR_7g060760 | 50.409 | 367 | 176 | 2 | 51 | 415 | 55 | 417 | 6.06e-140 | 406 |
| MS.gene21087.t1 | MTR_1g101000 | 53.153 | 333 | 151 | 3 | 53 | 380 | 39 | 371 | 2.32e-126 | 370 |
| MS.gene21087.t1 | MTR_1g036590 | 64.634 | 82 | 29 | 0 | 233 | 314 | 270 | 351 | 1.86e-29 | 119 |
| MS.gene21087.t1 | MTR_7g006750 | 52.128 | 94 | 45 | 0 | 192 | 285 | 467 | 560 | 4.83e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21087.t1 | AT3G05910 | 69.378 | 418 | 123 | 4 | 1 | 416 | 1 | 415 | 0.0 | 613 |
| MS.gene21087.t1 | AT5G26670 | 69.212 | 419 | 123 | 4 | 1 | 416 | 1 | 416 | 0.0 | 603 |
| MS.gene21087.t1 | AT1G57590 | 73.171 | 369 | 99 | 0 | 48 | 416 | 75 | 443 | 0.0 | 589 |
| MS.gene21087.t1 | AT3G62060 | 64.878 | 410 | 137 | 2 | 7 | 415 | 15 | 418 | 0.0 | 577 |
| MS.gene21087.t1 | AT3G62060 | 64.720 | 411 | 138 | 2 | 7 | 416 | 15 | 419 | 0.0 | 576 |
| MS.gene21087.t1 | AT2G46930 | 62.954 | 413 | 146 | 3 | 4 | 416 | 11 | 416 | 0.0 | 564 |
| MS.gene21087.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 3.34e-170 | 478 |
| MS.gene21087.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 3.34e-170 | 478 |
| MS.gene21087.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 3.34e-170 | 478 |
| MS.gene21087.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 2.66e-163 | 465 |
| MS.gene21087.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 2.66e-163 | 465 |
| MS.gene21087.t1 | AT1G09550 | 60.350 | 343 | 135 | 1 | 52 | 394 | 41 | 382 | 7.39e-159 | 453 |
| MS.gene21087.t1 | AT4G19420 | 53.000 | 400 | 151 | 2 | 53 | 415 | 25 | 424 | 1.74e-156 | 449 |
| MS.gene21087.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 8.74e-151 | 434 |
| MS.gene21087.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 8.74e-151 | 434 |
| MS.gene21087.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 1.55e-150 | 434 |
| MS.gene21087.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 2.00e-150 | 434 |
| MS.gene21087.t1 | AT3G05910 | 66.019 | 309 | 100 | 4 | 1 | 307 | 1 | 306 | 2.65e-147 | 421 |
| MS.gene21087.t1 | AT4G19410 | 51.359 | 368 | 176 | 2 | 46 | 410 | 17 | 384 | 1.34e-145 | 419 |
| MS.gene21087.t1 | AT3G09410 | 50.402 | 373 | 182 | 1 | 46 | 415 | 54 | 426 | 1.96e-144 | 418 |
| MS.gene21087.t1 | AT5G45280 | 49.457 | 368 | 183 | 2 | 46 | 410 | 17 | 384 | 7.07e-143 | 412 |
| MS.gene21087.t1 | AT4G19410 | 50.847 | 354 | 172 | 1 | 46 | 397 | 17 | 370 | 1.20e-137 | 404 |
| MS.gene21087.t1 | AT3G09405 | 49.864 | 367 | 179 | 2 | 47 | 410 | 45 | 409 | 5.19e-136 | 396 |
| MS.gene21087.t1 | AT3G09410 | 49.412 | 340 | 169 | 1 | 46 | 382 | 54 | 393 | 1.92e-126 | 371 |
| MS.gene21087.t1 | AT5G45280 | 52.055 | 292 | 138 | 1 | 43 | 332 | 14 | 305 | 2.33e-116 | 344 |
| MS.gene21087.t1 | AT3G09405 | 50.165 | 303 | 146 | 2 | 111 | 410 | 2 | 302 | 3.85e-112 | 331 |
| MS.gene21087.t1 | AT4G19420 | 58.403 | 238 | 94 | 2 | 53 | 288 | 25 | 259 | 2.07e-96 | 291 |
Find 98 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTCAGGCTCTTCTTTC+TGG | -0.013953 | 1.4:+68214500 | MS.gene21087:intron |
| TCAACCCACCTTGCAGAAAT+TGG | 0.177359 | 1.4:-68215495 | None:intergenic |
| TTTGTTTCAGTGCTTCTTTC+CGG | 0.212409 | 1.4:+68215193 | MS.gene21087:intron |
| TTGCTTAATATTCCAGTAAA+AGG | 0.219538 | 1.4:-68213826 | None:intergenic |
| TCATCAAAGTTCATGGAAAA+AGG | 0.234937 | 1.4:+68213799 | MS.gene21087:CDS |
| TAGCAGCAGCAGATTGAATA+AGG | 0.246442 | 1.4:-68212915 | None:intergenic |
| AGAAGCTTCATGAGCTTCTA+AGG | 0.265076 | 1.4:-68212848 | None:intergenic |
| GTGAACCAGAACATTTATTA+TGG | 0.270304 | 1.4:-68215468 | None:intergenic |
| CAGCTGGCTTGTTAATTTAG+AGG | 0.278550 | 1.4:+68213434 | MS.gene21087:CDS |
| CTTCTTTCTGGATGCTCAGC+TGG | 0.328684 | 1.4:+68214512 | MS.gene21087:CDS |
| CACTTCACTTTGGTAGTCCT+TGG | 0.337219 | 1.4:-68214581 | None:intergenic |
| TTAAACCATAATAAATGTTC+TGG | 0.344297 | 1.4:+68215463 | MS.gene21087:CDS |
| TTCTCAAGATCAGGTCAAAA+TGG | 0.355306 | 1.4:+68215646 | MS.gene21087:CDS |
| CGGCCGATCCCCACGGCAAT+TGG | 0.361858 | 1.4:+68215428 | MS.gene21087:CDS |
| TAAAATCTGATACAGGATTC+AGG | 0.362095 | 1.4:+68215596 | MS.gene21087:intron |
| AATTCAGAGGACAACGCATT+TGG | 0.411794 | 1.4:+68214353 | MS.gene21087:CDS |
| GTTTACCTGCCACGAGTCAT+AGG | 0.421718 | 1.4:-68215264 | None:intergenic |
| ACGTGGATCATCAAAGTTCA+TGG | 0.433128 | 1.4:+68213792 | MS.gene21087:CDS |
| TGATAGCACATGCCACCATT+TGG | 0.437780 | 1.4:+68216210 | MS.gene21087:CDS |
| GCTGACAACTCTCCTGTCAT+AGG | 0.444782 | 1.4:+68215727 | MS.gene21087:CDS |
| ATTCAATCTGCTGCTGCTAA+AGG | 0.458885 | 1.4:+68212919 | MS.gene21087:CDS |
| ACTTCACTTTGGTAGTCCTT+GGG | 0.459019 | 1.4:-68214580 | None:intergenic |
| TACCTTATCTTCACTATCCC+CGG | 0.462721 | 1.4:-68214032 | None:intergenic |
| ACGCCAATTGCCGTGGGGAT+CGG | 0.463148 | 1.4:-68215431 | None:intergenic |
| TGCGATAGACGCAAGTTCTA+CGG | 0.464930 | 1.4:-68213759 | None:intergenic |
| ATGAAGGAGCTAAGCTTGAC+TGG | 0.465960 | 1.4:-68215405 | None:intergenic |
| TTGCTCTGGCTGTTGGAGAC+TGG | 0.473165 | 1.4:+68216140 | MS.gene21087:CDS |
| CAACGGTGTTGTCACCCTAC+AGG | 0.473602 | 1.4:+68214782 | MS.gene21087:CDS |
| GTGAGAGGCTTCTCAAGATC+AGG | 0.473932 | 1.4:+68215637 | MS.gene21087:CDS |
| ACGCATTTGGTTGGCTGCAG+TGG | 0.483484 | 1.4:+68214366 | MS.gene21087:CDS |
| ATCACTAAGGCACTTCACTT+TGG | 0.485245 | 1.4:-68214591 | None:intergenic |
| GTGAAGTGCCTTAGTGATGC+TGG | 0.487536 | 1.4:+68214596 | MS.gene21087:CDS |
| TAGCTGGTGGGCATACCCTC+AGG | 0.487893 | 1.4:+68214751 | MS.gene21087:CDS |
| GTGGAGGATTTGATGTCAAA+AGG | 0.488280 | 1.4:+68214385 | MS.gene21087:CDS |
| ACGGATCCGGTGCAAACAGC+TGG | 0.489904 | 1.4:+68213418 | MS.gene21087:CDS |
| CTCACCTTGTTTCCTATGAC+AGG | 0.490925 | 1.4:-68215739 | None:intergenic |
| CCGTGGGGATCGGCCGATGA+AGG | 0.493491 | 1.4:-68215421 | None:intergenic |
| TTTGATCGCGGATACGGATC+CGG | 0.495604 | 1.4:+68213405 | MS.gene21087:CDS |
| TACCGGGGATAGTGAAGATA+AGG | 0.496636 | 1.4:+68214030 | MS.gene21087:CDS |
| CAGAGGACAACGCATTTGGT+TGG | 0.504022 | 1.4:+68214357 | MS.gene21087:CDS |
| TAGGCAATTGCTCTGGCTGT+TGG | 0.506232 | 1.4:+68216133 | MS.gene21087:intron |
| TTCACTATCCCCGGTAAAAG+AGG | 0.509811 | 1.4:-68214023 | None:intergenic |
| CAGTATTAAGAATGAATAGC+GGG | 0.512415 | 1.4:-68215241 | None:intergenic |
| ACTTGTGGCTCAGCCTCACA+TGG | 0.512424 | 1.4:+68212882 | MS.gene21087:CDS |
| AGCAGCAGCAGATTGAATAA+GGG | 0.515953 | 1.4:-68212914 | None:intergenic |
| ATGTGTCTTGCCTCTCAGAT+TGG | 0.519666 | 1.4:-68215699 | None:intergenic |
| ATACTAGCAATCAAGTTCTC+CGG | 0.520958 | 1.4:-68215212 | None:intergenic |
| CATTTGGTTGGCTGCAGTGG+AGG | 0.521238 | 1.4:+68214369 | MS.gene21087:CDS |
| TTACACTGCGATGAATTTCG+AGG | 0.526633 | 1.4:+68214551 | MS.gene21087:CDS |
| GAAATAACCCAGCATCACTA+AGG | 0.526893 | 1.4:-68214604 | None:intergenic |
| CCGCGATCAAAATGATAAGC+AGG | 0.530290 | 1.4:-68213393 | None:intergenic |
| TTACAATGCAAACCCAGAAA+AGG | 0.531063 | 1.4:-68212756 | None:intergenic |
| CTTTCTGGATGCTCAGCTGG+TGG | 0.531189 | 1.4:+68214515 | MS.gene21087:CDS |
| TGCAATCACGCCAATTGCCG+TGG | 0.532481 | 1.4:-68215438 | None:intergenic |
| AACAAGCCAGCTGTTTGCAC+CGG | 0.541065 | 1.4:-68213424 | None:intergenic |
| TACTGCCTATGACTCGTGGC+AGG | 0.541796 | 1.4:+68215259 | MS.gene21087:CDS |
| TGGCTCATCTGAAAACCAAA+TGG | 0.544159 | 1.4:-68216225 | None:intergenic |
| AATAATGCTCAAGAGAATCC+AGG | 0.544827 | 1.4:+68213847 | MS.gene21087:CDS |
| CTCTCCTGTCATAGGAAACA+AGG | 0.552688 | 1.4:+68215735 | MS.gene21087:CDS |
| TACATTTGCATCAACCCAGT+TGG | 0.554003 | 1.4:-68212794 | None:intergenic |
| TCTGCTGCTGCTAAAGGAGC+TGG | 0.564131 | 1.4:+68212925 | MS.gene21087:CDS |
| GCAATCACGCCAATTGCCGT+GGG | 0.571050 | 1.4:-68215437 | None:intergenic |
| AATTTCGAGGTCATTTCCCA+AGG | 0.572709 | 1.4:+68214564 | MS.gene21087:CDS |
| GTGGCTCAGCCTCACATGGT+TGG | 0.572897 | 1.4:+68212886 | MS.gene21087:CDS |
| ATATCAATTATTACCGAAGT+GGG | 0.578018 | 1.4:-68215057 | None:intergenic |
| GAATACAGTGTTGATGTAGC+TGG | 0.581901 | 1.4:+68214735 | MS.gene21087:intron |
| CAATATGTAGGCAATTGCTC+TGG | 0.584344 | 1.4:+68216126 | MS.gene21087:intron |
| GAAATACTGTGGCAGGGAGG+TGG | 0.587258 | 1.4:+68213724 | MS.gene21087:intron |
| GATATCAATTATTACCGAAG+TGG | 0.589141 | 1.4:-68215058 | None:intergenic |
| CATGTGCTATCACAAGGGTA+AGG | 0.597112 | 1.4:-68216199 | None:intergenic |
| CCTTCATCGGCCGATCCCCA+CGG | 0.597346 | 1.4:+68215421 | MS.gene21087:CDS |
| GTGAAAATTCGTTACTGTGA+TGG | 0.602298 | 1.4:+68213998 | MS.gene21087:CDS |
| CAATGTCCTTAACAGCGGCT+CGG | 0.605068 | 1.4:-68216171 | None:intergenic |
| TACTGTGGCAGGGAGGTGGT+TGG | 0.606796 | 1.4:+68213728 | MS.gene21087:intron |
| TGGTGGCATGTGCTATCACA+AGG | 0.607600 | 1.4:-68216205 | None:intergenic |
| AATCTGAGAGGCAAGACACA+TGG | 0.627362 | 1.4:+68215701 | MS.gene21087:CDS |
| TAATCATCTTGATCCCACTT+CGG | 0.628050 | 1.4:+68215044 | MS.gene21087:CDS |
| GTCAAGCTTAGCTCCTTCAT+CGG | 0.630234 | 1.4:+68215408 | MS.gene21087:CDS |
| TCACAAATCCAATTTCTGCA+AGG | 0.632203 | 1.4:+68215487 | MS.gene21087:CDS |
| TGAAGTGCCTTAGTGATGCT+GGG | 0.640149 | 1.4:+68214597 | MS.gene21087:CDS |
| ATGTATGTGTACAACCTGCT+TGG | 0.643481 | 1.4:-68214419 | None:intergenic |
| AGGGTGATTCCAACCATGTG+AGG | 0.644329 | 1.4:-68212895 | None:intergenic |
| TTAATACTGCCTATGACTCG+TGG | 0.644352 | 1.4:+68215255 | MS.gene21087:CDS |
| GCTGCGCAGTTGCAATTCAG+AGG | 0.649968 | 1.4:+68214340 | MS.gene21087:CDS |
| TTGCTCACTGCCAATCTGAG+AGG | 0.650325 | 1.4:+68215689 | MS.gene21087:CDS |
| CTCATCTGAAAACCAAATGG+TGG | 0.655239 | 1.4:-68216222 | None:intergenic |
| AGATGATTAGTACAAACGCG+TGG | 0.666672 | 1.4:-68215030 | None:intergenic |
| TACAGGATTCAGGAATCACA+TGG | 0.672670 | 1.4:+68215606 | MS.gene21087:intron |
| GCAGTATTAAGAATGAATAG+CGG | 0.673265 | 1.4:-68215242 | None:intergenic |
| TATCGCAAGACAACACGACG+TGG | 0.673334 | 1.4:+68213775 | MS.gene21087:CDS |
| TACAGTGTTGATGTAGCTGG+TGG | 0.678330 | 1.4:+68214738 | MS.gene21087:intron |
| CACATGGTGAATGTTGTGAG+AGG | 0.686276 | 1.4:+68215622 | MS.gene21087:CDS |
| ACAATCAATGTCCTTAACAG+CGG | 0.695254 | 1.4:-68216176 | None:intergenic |
| AACCCAGAAAAGGTTCACCA+TGG | 0.700911 | 1.4:-68212746 | None:intergenic |
| CAATCACGCCAATTGCCGTG+GGG | 0.703508 | 1.4:-68215436 | None:intergenic |
| ACAGTGTTGATGTAGCTGGT+GGG | 0.721028 | 1.4:+68214739 | MS.gene21087:intron |
| AGTATTAAGAATGAATAGCG+GGG | 0.730636 | 1.4:-68215240 | None:intergenic |
| GGTGGCATGTGCTATCACAA+GGG | 0.739938 | 1.4:-68216204 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTAATTAATATA+TGG | + | chr1.4:68213482-68213501 | MS.gene21087:intron | 0.0% |
| !! | ATCATAAAATATGATTTATT+CGG | - | chr1.4:68215319-68215338 | None:intergenic | 10.0% |
| !!! | ATACTTAATTAATTTGTTTT+TGG | + | chr1.4:68213347-68213366 | MS.gene21087:intron | 10.0% |
| !! | AGGTTTAGTTAAAATATTAT+AGG | + | chr1.4:68215780-68215799 | MS.gene21087:intron | 15.0% |
| !!! | AACAATTAGGAATTAATTTT+AGG | - | chr1.4:68214707-68214726 | None:intergenic | 15.0% |
| !!! | AACATTTTTTATAACAAAGA+AGG | - | chr1.4:68212967-68212986 | None:intergenic | 15.0% |
| !! | AAAACCTTAATGAATAAAGT+TGG | - | chr1.4:68214081-68214100 | None:intergenic | 20.0% |
| !! | AAATCATGTGATAATAATGA+TGG | - | chr1.4:68214679-68214698 | None:intergenic | 20.0% |
| !! | AGGAAAAAGATATTACTAAA+AGG | - | chr1.4:68215174-68215193 | None:intergenic | 20.0% |
| !! | ATTTAACTAAAATCTGATAC+AGG | + | chr1.4:68215589-68215608 | MS.gene21087:intron | 20.0% |
| !! | TAAAAAAATCTGCAATCATA+CGG | - | chr1.4:68213967-68213986 | None:intergenic | 20.0% |
| !! | TTAAACCATAATAAATGTTC+TGG | + | chr1.4:68215463-68215482 | MS.gene21087:CDS | 20.0% |
| !!! | AAATCATATTTTATGATCTG+TGG | + | chr1.4:68215322-68215341 | MS.gene21087:intron | 20.0% |
| !!! | GAATATTTTATAGCAAAAAC+AGG | - | chr1.4:68215887-68215906 | None:intergenic | 20.0% |
| !!! | TAAACATCTTATTTCTAACT+CGG | + | chr1.4:68215282-68215301 | MS.gene21087:intron | 20.0% |
| !!! | TGAGTTAAAGATTTCTTTTT+TGG | - | chr1.4:68213286-68213305 | None:intergenic | 20.0% |
| !!! | TTATTCATTAAGGTTTTCAT+AGG | + | chr1.4:68214084-68214103 | MS.gene21087:intron | 20.0% |
| !!! | TTTGCTATAAAATATTCACA+TGG | + | chr1.4:68215890-68215909 | MS.gene21087:intron | 20.0% |
| ! | AATATGATTTATTCGGAGTT+TGG | - | chr1.4:68215312-68215331 | None:intergenic | 25.0% |
| ! | ACAGATAATATTCAGAAATC+AGG | - | chr1.4:68214312-68214331 | None:intergenic | 25.0% |
| ! | AGTTTATATGGCTTAAAACT+TGG | + | chr1.4:68214915-68214934 | MS.gene21087:intron | 25.0% |
| ! | ATAACAAAGAAGGTTAGAAA+TGG | - | chr1.4:68212957-68212976 | None:intergenic | 25.0% |
| ! | ATAGCCAACTTTATTCATTA+AGG | + | chr1.4:68214074-68214093 | MS.gene21087:intron | 25.0% |
| ! | ATATCAATTATTACCGAAGT+GGG | - | chr1.4:68215060-68215079 | None:intergenic | 25.0% |
| ! | CACATGCTAAATAGTTTATA+TGG | + | chr1.4:68214903-68214922 | MS.gene21087:intron | 25.0% |
| ! | GATATTTAAGTGAAATACTG+TGG | + | chr1.4:68213713-68213732 | MS.gene21087:intron | 25.0% |
| ! | GTTTCATTTGAATGAATTTG+AGG | + | chr1.4:68215108-68215127 | MS.gene21087:intron | 25.0% |
| ! | TAACCTTATATAAAGCATGA+TGG | + | chr1.4:68214956-68214975 | MS.gene21087:intron | 25.0% |
| ! | TACATATTGTCAATGCATAA+GGG | - | chr1.4:68216115-68216134 | None:intergenic | 25.0% |
| ! | TACTCAAATTATGCTGAAAA+AGG | + | chr1.4:68213912-68213931 | MS.gene21087:intron | 25.0% |
| ! | TAGAATGAAATACTGAAGTT+AGG | - | chr1.4:68214644-68214663 | None:intergenic | 25.0% |
| ! | TAGTCGATCTATTTAATGTA+GGG | + | chr1.4:68214274-68214293 | MS.gene21087:intron | 25.0% |
| ! | TCAATATGTTCATATCCTAA+AGG | + | chr1.4:68213520-68213539 | MS.gene21087:intron | 25.0% |
| ! | TGAATATTATCTGTTGACAT+AGG | + | chr1.4:68214318-68214337 | MS.gene21087:intron | 25.0% |
| ! | TGTTTGTTTGATTGAAAGTT+AGG | + | chr1.4:68214156-68214175 | MS.gene21087:intron | 25.0% |
| ! | TTAGTCGATCTATTTAATGT+AGG | + | chr1.4:68214273-68214292 | MS.gene21087:intron | 25.0% |
| ! | TTCACATGGAGAAAAATTAT+AGG | + | chr1.4:68215904-68215923 | MS.gene21087:intron | 25.0% |
| ! | TTGCTTAATATTCCAGTAAA+AGG | - | chr1.4:68213829-68213848 | None:intergenic | 25.0% |
| !! | TGTGATAATAATGATGGAAA+TGG | - | chr1.4:68214673-68214692 | None:intergenic | 25.0% |
| !! | TTTAGGATATGAACATATTG+AGG | - | chr1.4:68213521-68213540 | None:intergenic | 25.0% |
| !!! | ATTTTAACTAAACCTGCATA+GGG | - | chr1.4:68215775-68215794 | None:intergenic | 25.0% |
| !!! | TAAATCTGTAGCTTTTGATT+TGG | + | chr1.4:68213312-68213331 | MS.gene21087:intron | 25.0% |
| !!! | TATTTTAACTAAACCTGCAT+AGG | - | chr1.4:68215776-68215795 | None:intergenic | 25.0% |
| !!! | TCTTAGTTTAAAGTGTTGTT+GGG | + | chr1.4:68213578-68213597 | MS.gene21087:intron | 25.0% |
| !!! | TGATTGCAGATTTTTTTAAC+TGG | + | chr1.4:68213969-68213988 | MS.gene21087:intron | 25.0% |
| !!! | TTCTTAGTTTAAAGTGTTGT+TGG | + | chr1.4:68213577-68213596 | MS.gene21087:intron | 25.0% |
| AACTGTATGAATGATGCATA+AGG | + | chr1.4:68214207-68214226 | MS.gene21087:intron | 30.0% | |
| ACATACATAACATGGCAAAT+TGG | - | chr1.4:68213209-68213228 | None:intergenic | 30.0% | |
| AGCAGTGTCATGAAAAATAA+TGG | - | chr1.4:68215994-68216013 | None:intergenic | 30.0% | |
| AGTATTAAGAATGAATAGCG+GGG | - | chr1.4:68215243-68215262 | None:intergenic | 30.0% | |
| ATACATAACATGGCAAATTG+GGG | - | chr1.4:68213207-68213226 | None:intergenic | 30.0% | |
| CAACCATCATGCTTTATATA+AGG | - | chr1.4:68214962-68214981 | None:intergenic | 30.0% | |
| CAGTATTAAGAATGAATAGC+GGG | - | chr1.4:68215244-68215263 | None:intergenic | 30.0% | |
| CATACATAACATGGCAAATT+GGG | - | chr1.4:68213208-68213227 | None:intergenic | 30.0% | |
| CATCAAAGTTCATGGAAAAA+GGG | + | chr1.4:68213800-68213819 | MS.gene21087:CDS | 30.0% | |
| CTACATATTGTCAATGCATA+AGG | - | chr1.4:68216116-68216135 | None:intergenic | 30.0% | |
| CTCTGAACAATAATTAACGA+CGG | - | chr1.4:68215147-68215166 | None:intergenic | 30.0% | |
| GATATCAATTATTACCGAAG+TGG | - | chr1.4:68215061-68215080 | None:intergenic | 30.0% | |
| GCAGTATTAAGAATGAATAG+CGG | - | chr1.4:68215245-68215264 | None:intergenic | 30.0% | |
| GTGAACCAGAACATTTATTA+TGG | - | chr1.4:68215471-68215490 | None:intergenic | 30.0% | |
| TAAAATCTGATACAGGATTC+AGG | + | chr1.4:68215596-68215615 | MS.gene21087:intron | 30.0% | |
| TCACATTCACATACATAACA+TGG | - | chr1.4:68213217-68213236 | None:intergenic | 30.0% | |
| TCATCAAAGTTCATGGAAAA+AGG | + | chr1.4:68213799-68213818 | MS.gene21087:CDS | 30.0% | |
| TTTCAGCAACAAAACTTCAA+AGG | - | chr1.4:68213159-68213178 | None:intergenic | 30.0% | |
| ! | AAAGGATTTGCTTAACTGTT+TGG | + | chr1.4:68213930-68213949 | MS.gene21087:intron | 30.0% |
| ! | AGCAATACATGACATGTTTT+TGG | - | chr1.4:68213632-68213651 | None:intergenic | 30.0% |
| ! | CTTATGCATTGACAATATGT+AGG | + | chr1.4:68216114-68216133 | MS.gene21087:intron | 30.0% |
| ! | TTCTTCTTTTTCTTCACTTG+TGG | + | chr1.4:68212867-68212886 | MS.gene21087:CDS | 30.0% |
| ! | TTCTTGAGATCATTCTGTTT+TGG | + | chr1.4:68214819-68214838 | MS.gene21087:intron | 30.0% |
| ! | TTTACAACTTTGTTTCCTTC+AGG | + | chr1.4:68214487-68214506 | MS.gene21087:intron | 30.0% |
| !! | ATATTTTTGCACTCATTGCA+GGG | + | chr1.4:68214991-68215010 | MS.gene21087:intron | 30.0% |
| !! | CTTAGTTTAAAGTGTTGTTG+GGG | + | chr1.4:68213579-68213598 | MS.gene21087:intron | 30.0% |
| !! | TATATTTTTGCACTCATTGC+AGG | + | chr1.4:68214990-68215009 | MS.gene21087:intron | 30.0% |
| AAATCCAATTTCTGCAAGGT+GGG | + | chr1.4:68215491-68215510 | MS.gene21087:intron | 35.0% | |
| AATAATGCTCAAGAGAATCC+AGG | + | chr1.4:68213847-68213866 | MS.gene21087:CDS | 35.0% | |
| AATATTATAGGTTTCCGTGC+TGG | + | chr1.4:68215792-68215811 | MS.gene21087:intron | 35.0% | |
| ACAATCAATGTCCTTAACAG+CGG | - | chr1.4:68216179-68216198 | None:intergenic | 35.0% | |
| ACCGTTGAAAAAATTCCTGA+GGG | - | chr1.4:68214769-68214788 | None:intergenic | 35.0% | |
| AGAAAGACTTGTCAACCTTT+AGG | - | chr1.4:68213538-68213557 | None:intergenic | 35.0% | |
| AGGTTGACAAGTCTTTCTAT+TGG | + | chr1.4:68213540-68213559 | MS.gene21087:intron | 35.0% | |
| ATACTAGCAATCAAGTTCTC+CGG | - | chr1.4:68215215-68215234 | None:intergenic | 35.0% | |
| CTACATCAACACTGTATTCA+GGG | - | chr1.4:68214734-68214753 | None:intergenic | 35.0% | |
| GTGAAAATTCGTTACTGTGA+TGG | + | chr1.4:68213998-68214017 | MS.gene21087:CDS | 35.0% | |
| GTTTCAGTTGAATGAAAACC+TGG | - | chr1.4:68213868-68213887 | None:intergenic | 35.0% | |
| TAAAACTTGGTCATTTGGCA+TGG | + | chr1.4:68214928-68214947 | MS.gene21087:intron | 35.0% | |
| TAATCATCTTGATCCCACTT+CGG | + | chr1.4:68215044-68215063 | MS.gene21087:CDS | 35.0% | |
| TACATAACATGGCAAATTGG+GGG | - | chr1.4:68213206-68213225 | None:intergenic | 35.0% | |
| TACATCAACACTGTATTCAG+GGG | - | chr1.4:68214733-68214752 | None:intergenic | 35.0% | |
| TATTCAGGGGGAAAACAATT+AGG | - | chr1.4:68214720-68214739 | None:intergenic | 35.0% | |
| TCAAGTGAAAGAAAGATCCA+TGG | - | chr1.4:68214845-68214864 | None:intergenic | 35.0% | |
| TCACAAATCCAATTTCTGCA+AGG | + | chr1.4:68215487-68215506 | MS.gene21087:CDS | 35.0% | |
| TGGCTTAAAACTTGGTCATT+TGG | + | chr1.4:68214923-68214942 | MS.gene21087:intron | 35.0% | |
| TTAAGTGAAATACTGTGGCA+GGG | + | chr1.4:68213718-68213737 | MS.gene21087:intron | 35.0% | |
| TTACAATGCAAACCCAGAAA+AGG | - | chr1.4:68212759-68212778 | None:intergenic | 35.0% | |
| TTCTCAAGATCAGGTCAAAA+TGG | + | chr1.4:68215646-68215665 | MS.gene21087:CDS | 35.0% | |
| TTTAAGTGAAATACTGTGGC+AGG | + | chr1.4:68213717-68213736 | MS.gene21087:intron | 35.0% | |
| TTTGTTTCAGTGCTTCTTTC+CGG | + | chr1.4:68215193-68215212 | MS.gene21087:intron | 35.0% | |
| ! | AAAAAAAGTGCAGTACCTGT+AGG | - | chr1.4:68214800-68214819 | None:intergenic | 35.0% |
| ! | AAAAAAGTGCAGTACCTGTA+GGG | - | chr1.4:68214799-68214818 | None:intergenic | 35.0% |
| ! | AAATAATGGAATCGTCACTG+CGG | - | chr1.4:68215980-68215999 | None:intergenic | 35.0% |
| ! | GAAAAAGGGATACCTTTTAC+TGG | + | chr1.4:68213814-68213833 | MS.gene21087:CDS | 35.0% |
| !! | TATCATTTTGATCGCGGATA+CGG | + | chr1.4:68213399-68213418 | MS.gene21087:CDS | 35.0% |
| !!! | ACCCTCAGGAATTTTTTCAA+CGG | + | chr1.4:68214765-68214784 | MS.gene21087:CDS | 35.0% |
| !!! | TTTGTTTTTGGCAGTCTGTT+TGG | + | chr1.4:68213359-68213378 | MS.gene21087:intron | 35.0% |
| AATATAACCGCATACCAGCA+CGG | - | chr1.4:68215809-68215828 | None:intergenic | 40.0% | |
| AATTCAGAGGACAACGCATT+TGG | + | chr1.4:68214353-68214372 | MS.gene21087:CDS | 40.0% | |
| AATTTCGAGGTCATTTCCCA+AGG | + | chr1.4:68214564-68214583 | MS.gene21087:CDS | 40.0% | |
| ACATCAACACTGTATTCAGG+GGG | - | chr1.4:68214732-68214751 | None:intergenic | 40.0% | |
| ACGTGGATCATCAAAGTTCA+TGG | + | chr1.4:68213792-68213811 | MS.gene21087:CDS | 40.0% | |
| ACTACATCTAACACTAGCAG+AGG | - | chr1.4:68214115-68214134 | None:intergenic | 40.0% | |
| AGAAGCTTCATGAGCTTCTA+AGG | - | chr1.4:68212851-68212870 | None:intergenic | 40.0% | |
| AGATGATTAGTACAAACGCG+TGG | - | chr1.4:68215033-68215052 | None:intergenic | 40.0% | |
| AGCAGCAGCAGATTGAATAA+GGG | - | chr1.4:68212917-68212936 | None:intergenic | 40.0% | |
| AGTTTCACATATCCCTATGC+AGG | + | chr1.4:68215760-68215779 | MS.gene21087:intron | 40.0% | |
| ATGTATGTGTACAACCTGCT+TGG | - | chr1.4:68214422-68214441 | None:intergenic | 40.0% | |
| ATTCAATCTGCTGCTGCTAA+AGG | + | chr1.4:68212919-68212938 | MS.gene21087:CDS | 40.0% | |
| CAAATCCAATTTCTGCAAGG+TGG | + | chr1.4:68215490-68215509 | MS.gene21087:intron | 40.0% | |
| CAATATGTAGGCAATTGCTC+TGG | + | chr1.4:68216126-68216145 | MS.gene21087:intron | 40.0% | |
| CACCGTTGAAAAAATTCCTG+AGG | - | chr1.4:68214770-68214789 | None:intergenic | 40.0% | |
| GAAATAACCCAGCATCACTA+AGG | - | chr1.4:68214607-68214626 | None:intergenic | 40.0% | |
| GCTACATCAACACTGTATTC+AGG | - | chr1.4:68214735-68214754 | None:intergenic | 40.0% | |
| GTGGAGGATTTGATGTCAAA+AGG | + | chr1.4:68214385-68214404 | MS.gene21087:CDS | 40.0% | |
| TACAGGATTCAGGAATCACA+TGG | + | chr1.4:68215606-68215625 | MS.gene21087:intron | 40.0% | |
| TACATTTGCATCAACCCAGT+TGG | - | chr1.4:68212797-68212816 | None:intergenic | 40.0% | |
| TACCTTATCTTCACTATCCC+CGG | - | chr1.4:68214035-68214054 | None:intergenic | 40.0% | |
| TAGCAGCAGCAGATTGAATA+AGG | - | chr1.4:68212918-68212937 | None:intergenic | 40.0% | |
| TTAATACTGCCTATGACTCG+TGG | + | chr1.4:68215255-68215274 | MS.gene21087:CDS | 40.0% | |
| TTACACTGCGATGAATTTCG+AGG | + | chr1.4:68214551-68214570 | MS.gene21087:CDS | 40.0% | |
| ! | ACTTCACTTTGGTAGTCCTT+GGG | - | chr1.4:68214583-68214602 | None:intergenic | 40.0% |
| ! | ATAATTAACGACGGAGCACT+TGG | - | chr1.4:68215138-68215157 | None:intergenic | 40.0% |
| ! | ATCACTAAGGCACTTCACTT+TGG | - | chr1.4:68214594-68214613 | None:intergenic | 40.0% |
| !! | AGCACTTGTTTTCACCAACT+GGG | + | chr1.4:68212780-68212799 | MS.gene21087:CDS | 40.0% |
| !! | CAGCTGGCTTGTTAATTTAG+AGG | + | chr1.4:68213434-68213453 | MS.gene21087:CDS | 40.0% |
| !! | CCTGCTTATCATTTTGATCG+CGG | + | chr1.4:68213393-68213412 | MS.gene21087:CDS | 40.0% |
| !! | GAATACAGTGTTGATGTAGC+TGG | + | chr1.4:68214735-68214754 | MS.gene21087:intron | 40.0% |
| !! | GGAAAGAAGCACTGAAACAA+AGG | - | chr1.4:68215194-68215213 | None:intergenic | 40.0% |
| !! | TAGCACTTGTTTTCACCAAC+TGG | + | chr1.4:68212779-68212798 | MS.gene21087:CDS | 40.0% |
| !! | TTGACCAACTCAGCTTTGTT+TGG | + | chr1.4:68213251-68213270 | MS.gene21087:intron | 40.0% |
| !! | TTTTTGGCAGTCTGTTTGGA+TGG | + | chr1.4:68213363-68213382 | MS.gene21087:intron | 40.0% |
| !!! | AGATCATTCTGTTTTGGCCA+TGG | + | chr1.4:68214825-68214844 | MS.gene21087:intron | 40.0% |
| AATCTGAGAGGCAAGACACA+TGG | + | chr1.4:68215701-68215720 | MS.gene21087:CDS | 45.0% | |
| ACAGCCAAACAAAGCTGAGT+TGG | - | chr1.4:68213258-68213277 | None:intergenic | 45.0% | |
| ATCCAGAAAGAAGAGCCTGA+AGG | - | chr1.4:68214505-68214524 | None:intergenic | 45.0% | |
| ATGAAGGAGCTAAGCTTGAC+TGG | - | chr1.4:68215408-68215427 | None:intergenic | 45.0% | |
| ATGTGTCTTGCCTCTCAGAT+TGG | - | chr1.4:68215702-68215721 | None:intergenic | 45.0% | |
| CACATGGTGAATGTTGTGAG+AGG | + | chr1.4:68215622-68215641 | MS.gene21087:CDS | 45.0% | |
| CATGTGCTATCACAAGGGTA+AGG | - | chr1.4:68216202-68216221 | None:intergenic | 45.0% | |
| CCGCGATCAAAATGATAAGC+AGG | - | chr1.4:68213396-68213415 | None:intergenic | 45.0% | |
| CTCTCCTGTCATAGGAAACA+AGG | + | chr1.4:68215735-68215754 | MS.gene21087:CDS | 45.0% | |
| GTCAAGCTTAGCTCCTTCAT+CGG | + | chr1.4:68215408-68215427 | MS.gene21087:CDS | 45.0% | |
| TACCGGGGATAGTGAAGATA+AGG | + | chr1.4:68214030-68214049 | MS.gene21087:CDS | 45.0% | |
| TATTCCCAACGCTACTTCCT+CGG | + | chr1.4:68213668-68213687 | MS.gene21087:intron | 45.0% | |
| TCAACCCACCTTGCAGAAAT+TGG | - | chr1.4:68215498-68215517 | None:intergenic | 45.0% | |
| TGATAGCACATGCCACCATT+TGG | + | chr1.4:68216210-68216229 | MS.gene21087:CDS | 45.0% | |
| TGCGATAGACGCAAGTTCTA+CGG | - | chr1.4:68213762-68213781 | None:intergenic | 45.0% | |
| TTCACTATCCCCGGTAAAAG+AGG | - | chr1.4:68214026-68214045 | None:intergenic | 45.0% | |
| TTCCTTCAGGCTCTTCTTTC+TGG | + | chr1.4:68214500-68214519 | MS.gene21087:intron | 45.0% | |
| ! | CACTTCACTTTGGTAGTCCT+TGG | - | chr1.4:68214584-68214603 | None:intergenic | 45.0% |
| ! | CTCACCTTGTTTCCTATGAC+AGG | - | chr1.4:68215742-68215761 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTAGTGATGCT+GGG | + | chr1.4:68214597-68214616 | MS.gene21087:CDS | 45.0% |
| !! | ACAGTGTTGATGTAGCTGGT+GGG | + | chr1.4:68214739-68214758 | MS.gene21087:intron | 45.0% |
| !! | TACAGTGTTGATGTAGCTGG+TGG | + | chr1.4:68214738-68214757 | MS.gene21087:intron | 45.0% |
| !! | TGTGATGGTGCCTCTTTTAC+CGG | + | chr1.4:68214013-68214032 | MS.gene21087:CDS | 45.0% |
| !!! | GGGGACACACTTTTTTGTGA+AGG | + | chr1.4:68213598-68213617 | MS.gene21087:intron | 45.0% |
| !! | AATTAATTATCAATTAAAAA+TGG | + | chr1.4:68213110-68213129 | MS.gene21087:intron | 5.0% |
| !! | TTATTATTATTTATTTATTC+AGG | - | chr1.4:68215841-68215860 | None:intergenic | 5.0% |
| AACAAGCCAGCTGTTTGCAC+CGG | - | chr1.4:68213427-68213446 | None:intergenic | 50.0% | |
| AGGGTGATTCCAACCATGTG+AGG | - | chr1.4:68212898-68212917 | None:intergenic | 50.0% | |
| AGTGAAATACTGTGGCAGGG+AGG | + | chr1.4:68213721-68213740 | MS.gene21087:intron | 50.0% | |
| ATGTTTGTATAGCACCGCCG+AGG | - | chr1.4:68213688-68213707 | None:intergenic | 50.0% | |
| CAATGTCCTTAACAGCGGCT+CGG | - | chr1.4:68216174-68216193 | None:intergenic | 50.0% | |
| CAGAGGACAACGCATTTGGT+TGG | + | chr1.4:68214357-68214376 | MS.gene21087:CDS | 50.0% | |
| CTTCTTTCTGGATGCTCAGC+TGG | + | chr1.4:68214512-68214531 | MS.gene21087:CDS | 50.0% | |
| GCTGACAACTCTCCTGTCAT+AGG | + | chr1.4:68215727-68215746 | MS.gene21087:CDS | 50.0% | |
| GGTGGCATGTGCTATCACAA+GGG | - | chr1.4:68216207-68216226 | None:intergenic | 50.0% | |
| GTGAGAGGCTTCTCAAGATC+AGG | + | chr1.4:68215637-68215656 | MS.gene21087:CDS | 50.0% | |
| GTTTACCTGCCACGAGTCAT+AGG | - | chr1.4:68215267-68215286 | None:intergenic | 50.0% | |
| TAGGCAATTGCTCTGGCTGT+TGG | + | chr1.4:68216133-68216152 | MS.gene21087:intron | 50.0% | |
| TATCGCAAGACAACACGACG+TGG | + | chr1.4:68213775-68213794 | MS.gene21087:CDS | 50.0% | |
| TGGTGGCATGTGCTATCACA+AGG | - | chr1.4:68216208-68216227 | None:intergenic | 50.0% | |
| TTGCTCACTGCCAATCTGAG+AGG | + | chr1.4:68215689-68215708 | MS.gene21087:CDS | 50.0% | |
| TTTGATCGCGGATACGGATC+CGG | + | chr1.4:68213405-68213424 | MS.gene21087:CDS | 50.0% | |
| ! | AGGAATGCGTTTTGCCAAGC+AGG | + | chr1.4:68214405-68214424 | MS.gene21087:CDS | 50.0% |
| ! | GTGAAGTGCCTTAGTGATGC+TGG | + | chr1.4:68214596-68214615 | MS.gene21087:CDS | 50.0% |
| ! | TAGGTTTCCGTGCTGGTATG+CGG | + | chr1.4:68215799-68215818 | MS.gene21087:intron | 50.0% |
| ! | TTTTGACCGAGCCGCTGTTA+AGG | + | chr1.4:68216165-68216184 | MS.gene21087:CDS | 50.0% |
| !! | GTGATGGTGCCTCTTTTACC+GGG | + | chr1.4:68214014-68214033 | MS.gene21087:CDS | 50.0% |
| !! | TGATGGTGCCTCTTTTACCG+GGG | + | chr1.4:68214015-68214034 | MS.gene21087:CDS | 50.0% |
| ACTTGTGGCTCAGCCTCACA+TGG | + | chr1.4:68212882-68212901 | MS.gene21087:CDS | 55.0% | |
| CAATCACGCCAATTGCCGTG+GGG | - | chr1.4:68215439-68215458 | None:intergenic | 55.0% | |
| CTTTCTGGATGCTCAGCTGG+TGG | + | chr1.4:68214515-68214534 | MS.gene21087:CDS | 55.0% | |
| GAAATACTGTGGCAGGGAGG+TGG | + | chr1.4:68213724-68213743 | MS.gene21087:intron | 55.0% | |
| GCAATCACGCCAATTGCCGT+GGG | - | chr1.4:68215440-68215459 | None:intergenic | 55.0% | |
| GCTGCGCAGTTGCAATTCAG+AGG | + | chr1.4:68214340-68214359 | MS.gene21087:CDS | 55.0% | |
| TACTGCCTATGACTCGTGGC+AGG | + | chr1.4:68215259-68215278 | MS.gene21087:CDS | 55.0% | |
| TCTGCTGCTGCTAAAGGAGC+TGG | + | chr1.4:68212925-68212944 | MS.gene21087:CDS | 55.0% | |
| TGCAATCACGCCAATTGCCG+TGG | - | chr1.4:68215441-68215460 | None:intergenic | 55.0% | |
| TTGCTCTGGCTGTTGGAGAC+TGG | + | chr1.4:68216140-68216159 | MS.gene21087:CDS | 55.0% | |
| ! | ACGCATTTGGTTGGCTGCAG+TGG | + | chr1.4:68214366-68214385 | MS.gene21087:CDS | 55.0% |
| ! | CATTTGGTTGGCTGCAGTGG+AGG | + | chr1.4:68214369-68214388 | MS.gene21087:CDS | 55.0% |
| !! | CAACGGTGTTGTCACCCTAC+AGG | + | chr1.4:68214782-68214801 | MS.gene21087:CDS | 55.0% |
| ACCGCCGAGGAAGTAGCGTT+GGG | - | chr1.4:68213675-68213694 | None:intergenic | 60.0% | |
| ACGCCAATTGCCGTGGGGAT+CGG | - | chr1.4:68215434-68215453 | None:intergenic | 60.0% | |
| ACGGATCCGGTGCAAACAGC+TGG | + | chr1.4:68213418-68213437 | MS.gene21087:CDS | 60.0% | |
| GTGGCTCAGCCTCACATGGT+TGG | + | chr1.4:68212886-68212905 | MS.gene21087:CDS | 60.0% | |
| TACTGTGGCAGGGAGGTGGT+TGG | + | chr1.4:68213728-68213747 | MS.gene21087:intron | 60.0% | |
| TCCCAACGCTACTTCCTCGG+CGG | + | chr1.4:68213671-68213690 | MS.gene21087:intron | 60.0% | |
| ! | TAGCTGGTGGGCATACCCTC+AGG | + | chr1.4:68214751-68214770 | MS.gene21087:CDS | 60.0% |
| CACCGCCGAGGAAGTAGCGT+TGG | - | chr1.4:68213676-68213695 | None:intergenic | 65.0% | |
| CCTTCATCGGCCGATCCCCA+CGG | + | chr1.4:68215421-68215440 | MS.gene21087:CDS | 65.0% | |
| CCGTGGGGATCGGCCGATGA+AGG | - | chr1.4:68215424-68215443 | None:intergenic | 70.0% | |
| CGGCCGATCCCCACGGCAAT+TGG | + | chr1.4:68215428-68215447 | MS.gene21087:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 68212748 | 68216243 | 68212748 | ID=MS.gene21087 |
| chr1.4 | mRNA | 68212748 | 68216243 | 68212748 | ID=MS.gene21087.t1;Parent=MS.gene21087 |
| chr1.4 | exon | 68212748 | 68212946 | 68212748 | ID=MS.gene21087.t1.exon1;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68212748 | 68212946 | 68212748 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68213373 | 68213455 | 68213373 | ID=MS.gene21087.t1.exon2;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68213373 | 68213455 | 68213373 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68213739 | 68213868 | 68213739 | ID=MS.gene21087.t1.exon3;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68213739 | 68213868 | 68213739 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68213978 | 68214051 | 68213978 | ID=MS.gene21087.t1.exon4;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68213978 | 68214051 | 68213978 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68214340 | 68214426 | 68214340 | ID=MS.gene21087.t1.exon5;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68214340 | 68214426 | 68214340 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68214509 | 68214633 | 68214509 | ID=MS.gene21087.t1.exon6;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68214509 | 68214633 | 68214509 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68214743 | 68214803 | 68214743 | ID=MS.gene21087.t1.exon7;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68214743 | 68214803 | 68214743 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68215012 | 68215065 | 68215012 | ID=MS.gene21087.t1.exon8;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68215012 | 68215065 | 68215012 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68215203 | 68215280 | 68215203 | ID=MS.gene21087.t1.exon9;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68215203 | 68215280 | 68215203 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68215403 | 68215508 | 68215403 | ID=MS.gene21087.t1.exon10;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68215403 | 68215508 | 68215403 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68215611 | 68215756 | 68215611 | ID=MS.gene21087.t1.exon11;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68215611 | 68215756 | 68215611 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| chr1.4 | exon | 68216136 | 68216243 | 68216136 | ID=MS.gene21087.t1.exon12;Parent=MS.gene21087.t1 |
| chr1.4 | CDS | 68216136 | 68216243 | 68216136 | ID=cds.MS.gene21087.t1;Parent=MS.gene21087.t1 |
| Gene Sequence |
| Protein sequence |
