Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22324.t1 | RHN53538.1 | 96.4 | 893 | 32 | 0 | 1 | 893 | 25 | 917 | 0.00E+00 | 1680.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22324.t1 | P25848 | 34.1 | 296 | 170 | 9 | 249 | 530 | 1005 | 1289 | 1.3e-35 | 153.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22324.t1 | G7KAN4 | 96.4 | 893 | 32 | 0 | 1 | 893 | 1 | 893 | 0.0e+00 | 1680.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22324.t1 | MTR_5g009600 | 97.424 | 893 | 23 | 0 | 1 | 893 | 1 | 893 | 0.0 | 1803 |
MS.gene22324.t1 | MTR_8g027990 | 53.333 | 600 | 246 | 8 | 1 | 595 | 1 | 571 | 0.0 | 635 |
MS.gene22324.t1 | MTR_4g082325 | 29.773 | 309 | 168 | 15 | 247 | 539 | 142 | 417 | 1.23e-24 | 108 |
MS.gene22324.t1 | MTR_4g132860 | 31.474 | 251 | 130 | 9 | 280 | 525 | 124 | 337 | 1.67e-24 | 107 |
MS.gene22324.t1 | MTR_4g105770 | 29.845 | 258 | 142 | 10 | 282 | 536 | 104 | 325 | 1.48e-23 | 103 |
MS.gene22324.t1 | MTR_4g116520 | 30.556 | 288 | 150 | 11 | 264 | 535 | 1110 | 1363 | 2.10e-23 | 107 |
MS.gene22324.t1 | MTR_1g026160 | 26.587 | 252 | 146 | 8 | 282 | 531 | 188 | 402 | 2.22e-23 | 104 |
MS.gene22324.t1 | MTR_3g078000 | 30.233 | 258 | 141 | 9 | 282 | 536 | 103 | 324 | 3.06e-23 | 102 |
MS.gene22324.t1 | MTR_5g023150 | 26.104 | 249 | 146 | 8 | 282 | 528 | 240 | 452 | 4.82e-23 | 103 |
MS.gene22324.t1 | MTR_5g023150 | 26.104 | 249 | 146 | 8 | 282 | 528 | 337 | 549 | 6.44e-23 | 104 |
MS.gene22324.t1 | MTR_4g088745 | 27.273 | 253 | 145 | 10 | 282 | 531 | 92 | 308 | 4.69e-22 | 99.4 |
MS.gene22324.t1 | MTR_4g088755 | 27.273 | 253 | 145 | 10 | 282 | 531 | 87 | 303 | 5.06e-22 | 99.0 |
MS.gene22324.t1 | MTR_4g088750 | 26.616 | 263 | 155 | 9 | 282 | 541 | 248 | 475 | 6.96e-22 | 100 |
MS.gene22324.t1 | MTR_2g461180 | 29.373 | 303 | 166 | 12 | 264 | 549 | 1145 | 1416 | 7.93e-22 | 102 |
MS.gene22324.t1 | MTR_1g113960 | 26.908 | 249 | 144 | 8 | 282 | 528 | 343 | 555 | 1.04e-21 | 100 |
MS.gene22324.t1 | MTR_1g113960 | 26.908 | 249 | 144 | 8 | 282 | 528 | 343 | 555 | 1.16e-21 | 100 |
MS.gene22324.t1 | MTR_5g010730 | 28.013 | 307 | 165 | 16 | 246 | 534 | 421 | 689 | 1.26e-21 | 100 |
MS.gene22324.t1 | MTR_5g010730 | 28.013 | 307 | 165 | 16 | 246 | 534 | 476 | 744 | 1.93e-21 | 100 |
MS.gene22324.t1 | MTR_2g013900 | 25.954 | 262 | 158 | 9 | 282 | 541 | 209 | 436 | 1.02e-20 | 97.1 |
MS.gene22324.t1 | MTR_6g033130 | 31.618 | 272 | 152 | 8 | 270 | 536 | 1001 | 1243 | 1.14e-20 | 98.6 |
MS.gene22324.t1 | MTR_7g072710 | 29.134 | 254 | 143 | 9 | 278 | 523 | 45 | 269 | 1.53e-20 | 94.4 |
MS.gene22324.t1 | MTR_6g007603 | 28.137 | 263 | 143 | 10 | 279 | 526 | 118 | 349 | 1.64e-20 | 95.1 |
MS.gene22324.t1 | MTR_7g072710 | 29.134 | 254 | 143 | 9 | 278 | 523 | 82 | 306 | 2.15e-20 | 94.4 |
MS.gene22324.t1 | MTR_4g106980 | 26.996 | 263 | 146 | 8 | 279 | 526 | 135 | 366 | 2.28e-20 | 94.7 |
MS.gene22324.t1 | MTR_3g078110 | 25.779 | 353 | 192 | 13 | 212 | 526 | 17 | 337 | 2.96e-20 | 94.0 |
MS.gene22324.t1 | MTR_8g442400 | 26.687 | 326 | 185 | 11 | 222 | 526 | 1360 | 1652 | 4.26e-20 | 97.1 |
MS.gene22324.t1 | MTR_1g099110 | 24.315 | 292 | 167 | 10 | 245 | 519 | 256 | 510 | 4.99e-20 | 95.1 |
MS.gene22324.t1 | MTR_4g128650 | 29.153 | 295 | 163 | 10 | 247 | 524 | 810 | 1075 | 7.85e-20 | 95.9 |
MS.gene22324.t1 | MTR_3g114900 | 27.092 | 251 | 145 | 9 | 282 | 530 | 312 | 526 | 8.89e-20 | 94.4 |
MS.gene22324.t1 | MTR_1g099110 | 25.095 | 263 | 152 | 9 | 265 | 519 | 302 | 527 | 1.02e-19 | 94.7 |
MS.gene22324.t1 | MTR_4g122160 | 28.772 | 285 | 152 | 13 | 246 | 516 | 458 | 705 | 7.15e-18 | 89.4 |
MS.gene22324.t1 | MTR_2g034020 | 27.857 | 280 | 145 | 14 | 265 | 528 | 485 | 723 | 1.21e-16 | 85.1 |
MS.gene22324.t1 | MTR_3g034100 | 25.101 | 247 | 146 | 9 | 280 | 523 | 126 | 336 | 1.73e-16 | 82.8 |
MS.gene22324.t1 | MTR_3g076970 | 25.413 | 303 | 169 | 11 | 242 | 523 | 20 | 286 | 1.77e-16 | 82.4 |
MS.gene22324.t1 | MTR_1g090020 | 28.629 | 248 | 139 | 7 | 289 | 530 | 955 | 1170 | 2.30e-16 | 84.7 |
MS.gene22324.t1 | MTR_8g100085 | 25.101 | 247 | 146 | 9 | 280 | 523 | 177 | 387 | 2.57e-16 | 82.8 |
MS.gene22324.t1 | MTR_1g050520 | 28.696 | 230 | 115 | 9 | 326 | 526 | 106 | 315 | 7.58e-16 | 82.4 |
MS.gene22324.t1 | MTR_5g019700 | 26.939 | 245 | 150 | 9 | 279 | 523 | 86 | 301 | 9.86e-16 | 80.9 |
MS.gene22324.t1 | MTR_5g091880 | 27.881 | 269 | 156 | 11 | 280 | 541 | 205 | 442 | 1.21e-15 | 81.3 |
MS.gene22324.t1 | MTR_5g006560 | 27.461 | 193 | 111 | 6 | 334 | 526 | 201 | 364 | 6.56e-15 | 78.2 |
MS.gene22324.t1 | MTR_1g081790 | 24.252 | 301 | 173 | 13 | 246 | 530 | 687 | 948 | 6.98e-15 | 79.7 |
MS.gene22324.t1 | MTR_5g006560 | 28.177 | 181 | 103 | 5 | 343 | 523 | 242 | 395 | 1.40e-14 | 77.4 |
MS.gene22324.t1 | MTR_5g066490 | 25.581 | 301 | 165 | 15 | 247 | 528 | 645 | 905 | 1.42e-14 | 78.6 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 188 | 342 | 2.46e-14 | 75.9 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 186 | 340 | 2.57e-14 | 76.3 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 188 | 342 | 2.59e-14 | 76.3 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 186 | 340 | 2.85e-14 | 75.9 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 333 | 487 | 3.17e-14 | 77.0 |
MS.gene22324.t1 | MTR_1g026160 | 25.789 | 190 | 105 | 6 | 282 | 470 | 333 | 487 | 4.01e-14 | 76.6 |
MS.gene22324.t1 | MTR_1g061190 | 24.497 | 298 | 172 | 12 | 247 | 528 | 554 | 814 | 1.09e-13 | 75.9 |
MS.gene22324.t1 | MTR_3g465590 | 25.820 | 244 | 142 | 8 | 285 | 523 | 371 | 580 | 1.61e-13 | 74.7 |
MS.gene22324.t1 | MTR_5g083480 | 29.694 | 229 | 114 | 9 | 282 | 509 | 536 | 718 | 2.38e-13 | 74.7 |
MS.gene22324.t1 | MTR_4g005730 | 23.288 | 292 | 182 | 10 | 243 | 521 | 19 | 281 | 3.01e-13 | 74.3 |
MS.gene22324.t1 | MTR_4g005730 | 23.288 | 292 | 182 | 10 | 243 | 521 | 19 | 281 | 3.08e-13 | 74.3 |
MS.gene22324.t1 | MTR_4g005730 | 23.288 | 292 | 182 | 10 | 243 | 521 | 19 | 281 | 3.50e-13 | 73.9 |
MS.gene22324.t1 | MTR_5g083480 | 29.694 | 229 | 114 | 9 | 282 | 509 | 539 | 721 | 3.66e-13 | 73.9 |
MS.gene22324.t1 | MTR_8g088590 | 27.165 | 254 | 126 | 10 | 282 | 526 | 236 | 439 | 1.15e-12 | 71.6 |
MS.gene22324.t1 | MTR_3g073250 | 27.197 | 239 | 136 | 8 | 277 | 513 | 309 | 511 | 1.41e-12 | 71.6 |
MS.gene22324.t1 | MTR_1g050690 | 28.000 | 275 | 149 | 13 | 265 | 526 | 436 | 674 | 2.82e-12 | 70.9 |
MS.gene22324.t1 | MTR_4g106980 | 26.761 | 213 | 111 | 7 | 279 | 476 | 135 | 317 | 8.16e-12 | 68.2 |
MS.gene22324.t1 | MTR_6g006770 | 23.675 | 283 | 178 | 9 | 243 | 514 | 11 | 266 | 8.87e-12 | 69.3 |
MS.gene22324.t1 | MTR_8g058250 | 26.733 | 303 | 147 | 16 | 255 | 523 | 674 | 935 | 9.08e-12 | 69.7 |
MS.gene22324.t1 | MTR_1g026160 | 24.731 | 186 | 104 | 6 | 282 | 466 | 186 | 336 | 9.18e-12 | 67.8 |
MS.gene22324.t1 | MTR_8g058250 | 26.733 | 303 | 147 | 16 | 255 | 523 | 578 | 839 | 9.32e-12 | 69.7 |
MS.gene22324.t1 | MTR_4g094958 | 24.702 | 336 | 170 | 14 | 239 | 523 | 458 | 761 | 1.00e-11 | 69.3 |
MS.gene22324.t1 | MTR_4g094415 | 27.350 | 234 | 130 | 7 | 283 | 514 | 211 | 406 | 1.04e-11 | 68.9 |
MS.gene22324.t1 | MTR_2g010470 | 26.190 | 252 | 131 | 11 | 241 | 469 | 676 | 895 | 1.69e-11 | 68.9 |
MS.gene22324.t1 | MTR_1g110280 | 24.752 | 303 | 166 | 13 | 255 | 527 | 368 | 638 | 2.49e-11 | 67.8 |
MS.gene22324.t1 | MTR_8g093730 | 26.293 | 232 | 133 | 8 | 285 | 514 | 349 | 544 | 4.41e-11 | 67.0 |
MS.gene22324.t1 | MTR_1g110270 | 25.869 | 259 | 158 | 9 | 277 | 524 | 354 | 589 | 5.33e-11 | 67.0 |
MS.gene22324.t1 | MTR_4g080030 | 26.316 | 285 | 160 | 13 | 257 | 531 | 559 | 803 | 6.26e-11 | 66.6 |
MS.gene22324.t1 | MTR_5g055470 | 25.769 | 260 | 144 | 11 | 277 | 521 | 377 | 602 | 6.77e-11 | 66.6 |
MS.gene22324.t1 | MTR_7g117520 | 26.592 | 267 | 138 | 12 | 280 | 523 | 457 | 688 | 8.26e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22324.t1 | AT1G64300 | 52.510 | 777 | 297 | 14 | 1 | 767 | 1 | 715 | 0.0 | 786 |
MS.gene22324.t1 | AT1G64300 | 52.510 | 777 | 297 | 14 | 1 | 767 | 1 | 715 | 0.0 | 786 |
MS.gene22324.t1 | AT5G41730 | 52.426 | 742 | 294 | 11 | 1 | 726 | 1 | 699 | 0.0 | 764 |
MS.gene22324.t1 | AT5G41730 | 52.426 | 742 | 294 | 11 | 1 | 726 | 1 | 699 | 0.0 | 764 |
MS.gene22324.t1 | AT1G01450 | 53.590 | 390 | 151 | 7 | 211 | 594 | 2 | 367 | 1.58e-131 | 403 |
MS.gene22324.t1 | AT1G14000 | 31.392 | 309 | 165 | 17 | 247 | 540 | 161 | 437 | 1.79e-24 | 108 |
MS.gene22324.t1 | AT1G62400 | 30.645 | 248 | 131 | 8 | 280 | 523 | 130 | 340 | 5.51e-24 | 105 |
MS.gene22324.t1 | AT3G46930 | 25.959 | 339 | 198 | 10 | 224 | 545 | 179 | 481 | 8.07e-24 | 107 |
MS.gene22324.t1 | AT3G46930 | 25.959 | 339 | 198 | 10 | 224 | 545 | 144 | 446 | 1.20e-23 | 105 |
MS.gene22324.t1 | AT3G46920 | 28.378 | 370 | 191 | 16 | 192 | 530 | 750 | 1076 | 1.19e-22 | 105 |
MS.gene22324.t1 | AT3G46920 | 28.378 | 370 | 191 | 16 | 192 | 530 | 816 | 1142 | 1.23e-22 | 105 |
MS.gene22324.t1 | AT5G58950 | 27.451 | 255 | 140 | 11 | 276 | 523 | 247 | 463 | 1.51e-21 | 100 |
MS.gene22324.t1 | AT2G35050 | 28.618 | 304 | 166 | 14 | 242 | 526 | 968 | 1239 | 4.22e-21 | 100 |
MS.gene22324.t1 | AT2G35050 | 28.618 | 304 | 166 | 14 | 242 | 526 | 968 | 1239 | 4.22e-21 | 100 |
MS.gene22324.t1 | AT5G01850 | 27.642 | 246 | 145 | 7 | 282 | 523 | 63 | 279 | 1.11e-20 | 94.7 |
MS.gene22324.t1 | AT4G38470 | 25.794 | 252 | 149 | 8 | 282 | 531 | 332 | 547 | 2.88e-20 | 96.3 |
MS.gene22324.t1 | AT5G57610 | 27.723 | 303 | 173 | 10 | 247 | 532 | 780 | 1053 | 3.44e-20 | 97.1 |
MS.gene22324.t1 | AT5G01850 | 29.907 | 214 | 120 | 6 | 314 | 523 | 116 | 303 | 1.29e-19 | 92.0 |
MS.gene22324.t1 | AT4G35780 | 24.590 | 244 | 146 | 8 | 282 | 523 | 334 | 541 | 1.33e-19 | 94.4 |
MS.gene22324.t1 | AT4G38470 | 25.506 | 247 | 146 | 8 | 282 | 526 | 332 | 542 | 1.56e-19 | 94.0 |
MS.gene22324.t1 | AT5G50000 | 26.616 | 263 | 147 | 8 | 279 | 526 | 128 | 359 | 1.72e-19 | 92.0 |
MS.gene22324.t1 | AT3G01490 | 28.244 | 262 | 144 | 11 | 279 | 526 | 154 | 385 | 2.43e-19 | 92.0 |
MS.gene22324.t1 | AT1G04700 | 30.380 | 237 | 137 | 6 | 289 | 524 | 821 | 1030 | 2.48e-19 | 94.4 |
MS.gene22324.t1 | AT1G04700 | 30.380 | 237 | 137 | 6 | 289 | 524 | 821 | 1030 | 2.48e-19 | 94.4 |
MS.gene22324.t1 | AT2G17700 | 26.000 | 250 | 145 | 10 | 282 | 528 | 328 | 540 | 3.03e-19 | 92.8 |
MS.gene22324.t1 | AT1G79570 | 26.403 | 303 | 175 | 10 | 242 | 526 | 958 | 1230 | 3.91e-19 | 94.0 |
MS.gene22324.t1 | AT1G79570 | 26.403 | 303 | 175 | 10 | 242 | 526 | 958 | 1230 | 3.91e-19 | 94.0 |
MS.gene22324.t1 | AT3G24715 | 28.873 | 284 | 172 | 9 | 243 | 522 | 842 | 1099 | 4.06e-19 | 93.6 |
MS.gene22324.t1 | AT3G24715 | 28.873 | 284 | 172 | 9 | 243 | 522 | 842 | 1099 | 4.06e-19 | 93.6 |
MS.gene22324.t1 | AT3G24715 | 28.873 | 284 | 172 | 9 | 243 | 522 | 842 | 1099 | 4.06e-19 | 93.6 |
MS.gene22324.t1 | AT1G16270 | 27.143 | 280 | 167 | 8 | 258 | 533 | 890 | 1136 | 4.45e-19 | 93.6 |
MS.gene22324.t1 | AT1G16270 | 27.143 | 280 | 167 | 8 | 258 | 533 | 890 | 1136 | 4.45e-19 | 93.6 |
MS.gene22324.t1 | AT1G16270 | 27.143 | 280 | 167 | 8 | 258 | 533 | 890 | 1136 | 4.45e-19 | 93.6 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT4G31170 | 27.092 | 251 | 136 | 9 | 280 | 523 | 175 | 385 | 4.93e-19 | 91.3 |
MS.gene22324.t1 | AT3G50730 | 25.403 | 248 | 156 | 8 | 277 | 523 | 77 | 296 | 2.13e-18 | 88.6 |
MS.gene22324.t1 | AT4G23050 | 27.815 | 302 | 158 | 14 | 246 | 528 | 466 | 726 | 2.68e-18 | 90.5 |
MS.gene22324.t1 | AT4G23050 | 27.815 | 302 | 158 | 14 | 246 | 528 | 465 | 725 | 2.77e-18 | 90.5 |
MS.gene22324.t1 | AT3G06630 | 28.283 | 297 | 160 | 15 | 247 | 528 | 433 | 691 | 3.13e-18 | 90.1 |
MS.gene22324.t1 | AT5G66710 | 25.641 | 273 | 163 | 8 | 278 | 544 | 113 | 351 | 4.13e-18 | 88.2 |
MS.gene22324.t1 | AT2G40860 | 30.964 | 197 | 98 | 6 | 340 | 514 | 24 | 204 | 1.02e-17 | 88.2 |
MS.gene22324.t1 | AT5G49470 | 27.857 | 280 | 145 | 14 | 265 | 528 | 510 | 748 | 1.06e-17 | 88.6 |
MS.gene22324.t1 | AT5G49470 | 27.857 | 280 | 145 | 14 | 265 | 528 | 484 | 722 | 1.18e-17 | 88.6 |
MS.gene22324.t1 | AT2G40860 | 30.144 | 209 | 108 | 6 | 340 | 526 | 122 | 314 | 1.33e-17 | 88.2 |
MS.gene22324.t1 | AT5G11850 | 25.676 | 296 | 169 | 12 | 246 | 527 | 607 | 865 | 1.51e-17 | 88.6 |
MS.gene22324.t1 | AT3G27560 | 27.600 | 250 | 146 | 10 | 282 | 526 | 71 | 290 | 1.62e-17 | 85.9 |
MS.gene22324.t1 | AT5G49470 | 27.857 | 280 | 145 | 14 | 265 | 528 | 383 | 621 | 1.65e-17 | 87.8 |
MS.gene22324.t1 | AT2G40860 | 30.964 | 197 | 98 | 6 | 340 | 514 | 122 | 302 | 1.67e-17 | 87.8 |
MS.gene22324.t1 | AT2G40860 | 30.964 | 197 | 98 | 6 | 340 | 514 | 122 | 302 | 1.67e-17 | 87.8 |
MS.gene22324.t1 | AT5G49470 | 27.857 | 280 | 145 | 14 | 265 | 528 | 223 | 461 | 2.23e-17 | 86.7 |
MS.gene22324.t1 | AT2G24360 | 26.050 | 238 | 143 | 7 | 286 | 523 | 180 | 384 | 2.32e-17 | 85.9 |
MS.gene22324.t1 | AT5G40540 | 27.668 | 253 | 148 | 11 | 276 | 523 | 64 | 286 | 2.84e-17 | 85.1 |
MS.gene22324.t1 | AT3G22750 | 24.528 | 265 | 151 | 8 | 279 | 526 | 120 | 352 | 3.88e-17 | 84.7 |
MS.gene22324.t1 | AT3G57830 | 27.737 | 274 | 162 | 10 | 279 | 527 | 398 | 660 | 5.88e-17 | 86.3 |
MS.gene22324.t1 | AT3G57830 | 27.737 | 274 | 162 | 10 | 279 | 527 | 398 | 660 | 5.88e-17 | 86.3 |
MS.gene22324.t1 | AT4G18950 | 28.571 | 252 | 138 | 10 | 282 | 526 | 200 | 416 | 9.17e-17 | 84.3 |
MS.gene22324.t1 | AT4G18950 | 28.571 | 252 | 138 | 10 | 282 | 526 | 200 | 416 | 1.02e-16 | 84.3 |
MS.gene22324.t1 | AT3G63260 | 24.060 | 266 | 155 | 8 | 279 | 526 | 129 | 365 | 1.11e-16 | 83.6 |
MS.gene22324.t1 | AT4G24480 | 26.073 | 303 | 166 | 13 | 247 | 528 | 668 | 933 | 1.69e-16 | 85.1 |
MS.gene22324.t1 | AT2G42290 | 28.731 | 268 | 159 | 9 | 282 | 527 | 389 | 646 | 2.03e-16 | 84.3 |
MS.gene22324.t1 | AT5G50180 | 27.236 | 246 | 145 | 9 | 282 | 523 | 65 | 280 | 2.06e-16 | 82.4 |
MS.gene22324.t1 | AT1G67890 | 27.957 | 279 | 145 | 15 | 265 | 528 | 506 | 743 | 2.31e-16 | 84.3 |
MS.gene22324.t1 | AT5G40540 | 29.439 | 214 | 120 | 9 | 314 | 523 | 3 | 189 | 4.34e-16 | 79.7 |
MS.gene22324.t1 | AT4G24480 | 25.589 | 297 | 170 | 13 | 247 | 528 | 668 | 928 | 4.70e-16 | 83.6 |
MS.gene22324.t1 | AT4G24480 | 25.589 | 297 | 170 | 13 | 247 | 528 | 668 | 928 | 5.51e-16 | 83.6 |
MS.gene22324.t1 | AT5G40540 | 29.439 | 214 | 120 | 9 | 314 | 523 | 24 | 210 | 7.07e-16 | 79.3 |
MS.gene22324.t1 | AT3G06620 | 27.798 | 277 | 149 | 13 | 265 | 528 | 513 | 751 | 8.97e-16 | 82.4 |
MS.gene22324.t1 | AT3G50720 | 26.848 | 257 | 159 | 9 | 276 | 531 | 88 | 316 | 1.51e-15 | 80.1 |
MS.gene22324.t1 | AT3G58760 | 29.000 | 300 | 156 | 18 | 247 | 526 | 165 | 427 | 6.60e-15 | 79.0 |
MS.gene22324.t1 | AT3G58760 | 29.000 | 300 | 156 | 18 | 247 | 526 | 228 | 490 | 7.86e-15 | 79.0 |
MS.gene22324.t1 | AT3G58760 | 29.000 | 300 | 156 | 18 | 247 | 526 | 228 | 490 | 7.86e-15 | 79.0 |
MS.gene22324.t1 | AT3G06630 | 28.261 | 276 | 145 | 15 | 247 | 507 | 433 | 670 | 8.96e-15 | 79.0 |
MS.gene22324.t1 | AT4G14780 | 26.316 | 190 | 109 | 5 | 339 | 526 | 178 | 338 | 1.10e-14 | 77.4 |
MS.gene22324.t1 | AT3G46930 | 24.715 | 263 | 149 | 8 | 224 | 473 | 179 | 405 | 3.19e-14 | 76.6 |
MS.gene22324.t1 | AT3G46930 | 24.715 | 263 | 149 | 8 | 224 | 473 | 179 | 405 | 3.40e-14 | 76.3 |
MS.gene22324.t1 | AT2G31800 | 25.987 | 304 | 177 | 14 | 243 | 530 | 188 | 459 | 4.13e-14 | 76.3 |
MS.gene22324.t1 | AT3G46930 | 24.715 | 263 | 149 | 8 | 224 | 473 | 144 | 370 | 5.54e-14 | 75.5 |
MS.gene22324.t1 | AT3G46930 | 24.715 | 263 | 149 | 8 | 224 | 473 | 83 | 309 | 7.30e-14 | 74.3 |
MS.gene22324.t1 | AT3G58640 | 28.205 | 273 | 146 | 13 | 257 | 519 | 565 | 797 | 7.73e-14 | 76.3 |
MS.gene22324.t1 | AT3G58640 | 28.205 | 273 | 146 | 13 | 257 | 519 | 565 | 797 | 7.73e-14 | 76.3 |
MS.gene22324.t1 | AT1G50240 | 24.211 | 285 | 161 | 12 | 243 | 513 | 1 | 244 | 2.11e-13 | 75.1 |
MS.gene22324.t1 | AT1G50240 | 24.211 | 285 | 161 | 12 | 243 | 513 | 1 | 244 | 2.11e-13 | 75.1 |
MS.gene22324.t1 | AT5G66850 | 25.703 | 249 | 153 | 10 | 283 | 530 | 394 | 611 | 3.08e-13 | 74.3 |
MS.gene22324.t1 | AT5G01890 | 23.743 | 358 | 209 | 13 | 191 | 527 | 646 | 960 | 3.43e-13 | 74.3 |
MS.gene22324.t1 | AT5G66850 | 25.703 | 249 | 153 | 10 | 283 | 530 | 394 | 611 | 4.40e-13 | 73.6 |
MS.gene22324.t1 | AT3G06630 | 28.571 | 238 | 120 | 13 | 247 | 470 | 349 | 550 | 5.26e-13 | 73.2 |
MS.gene22324.t1 | AT3G59830 | 27.586 | 290 | 162 | 13 | 247 | 519 | 193 | 451 | 5.40e-13 | 72.8 |
MS.gene22324.t1 | AT3G06630 | 28.571 | 238 | 120 | 13 | 247 | 470 | 433 | 634 | 5.46e-13 | 73.2 |
MS.gene22324.t1 | AT3G06630 | 28.571 | 238 | 120 | 13 | 247 | 470 | 433 | 634 | 5.46e-13 | 73.2 |
MS.gene22324.t1 | AT3G06630 | 28.571 | 238 | 120 | 13 | 247 | 470 | 433 | 634 | 5.46e-13 | 73.2 |
MS.gene22324.t1 | AT5G18700 | 25.847 | 236 | 142 | 10 | 285 | 520 | 46 | 248 | 8.35e-13 | 73.2 |
MS.gene22324.t1 | AT1G67890 | 27.907 | 258 | 130 | 15 | 265 | 507 | 506 | 722 | 3.32e-12 | 70.9 |
MS.gene22324.t1 | AT1G67890 | 27.907 | 258 | 130 | 15 | 265 | 507 | 506 | 722 | 3.32e-12 | 70.9 |
MS.gene22324.t1 | AT1G67890 | 27.907 | 258 | 130 | 15 | 265 | 507 | 378 | 594 | 4.31e-12 | 70.5 |
MS.gene22324.t1 | AT2G31010 | 25.685 | 292 | 159 | 13 | 257 | 538 | 531 | 774 | 5.12e-12 | 70.5 |
MS.gene22324.t1 | AT2G31010 | 25.685 | 292 | 159 | 13 | 257 | 538 | 531 | 774 | 5.12e-12 | 70.5 |
MS.gene22324.t1 | AT3G53930 | 27.586 | 261 | 134 | 13 | 247 | 491 | 19 | 240 | 6.44e-12 | 70.1 |
MS.gene22324.t1 | AT3G53930 | 27.586 | 261 | 134 | 13 | 247 | 491 | 19 | 240 | 6.72e-12 | 70.1 |
MS.gene22324.t1 | AT5G49470 | 28.182 | 220 | 104 | 12 | 265 | 469 | 510 | 690 | 9.75e-12 | 69.3 |
MS.gene22324.t1 | AT5G49470 | 28.182 | 220 | 104 | 12 | 265 | 469 | 510 | 690 | 1.03e-11 | 69.3 |
MS.gene22324.t1 | AT2G42640 | 28.044 | 271 | 141 | 13 | 265 | 524 | 547 | 774 | 1.17e-11 | 69.3 |
MS.gene22324.t1 | AT2G42640 | 28.044 | 271 | 141 | 13 | 265 | 524 | 509 | 736 | 1.32e-11 | 68.9 |
MS.gene22324.t1 | AT5G38210 | 24.739 | 287 | 162 | 10 | 280 | 544 | 391 | 645 | 1.67e-11 | 68.6 |
MS.gene22324.t1 | AT5G38210 | 25.175 | 286 | 162 | 10 | 280 | 544 | 409 | 663 | 1.69e-11 | 68.6 |
MS.gene22324.t1 | AT5G07140 | 26.014 | 296 | 177 | 13 | 242 | 528 | 321 | 583 | 2.66e-11 | 67.8 |
MS.gene22324.t1 | AT4G08480 | 26.172 | 256 | 147 | 9 | 261 | 514 | 529 | 744 | 3.06e-11 | 67.8 |
MS.gene22324.t1 | AT3G01490 | 27.632 | 228 | 122 | 10 | 279 | 492 | 154 | 352 | 3.10e-11 | 66.6 |
MS.gene22324.t1 | AT5G40540 | 28.061 | 196 | 114 | 8 | 276 | 469 | 64 | 234 | 5.17e-11 | 65.1 |
MS.gene22324.t1 | AT5G38210 | 25.175 | 286 | 162 | 10 | 280 | 544 | 397 | 651 | 5.41e-11 | 67.0 |
MS.gene22324.t1 | AT1G69270 | 25.820 | 244 | 144 | 10 | 270 | 510 | 291 | 500 | 5.43e-11 | 66.6 |
MS.gene22324.t1 | AT4G08500 | 26.336 | 262 | 153 | 9 | 255 | 514 | 353 | 576 | 5.69e-11 | 66.6 |
MS.gene22324.t1 | AT3G02880 | 31.500 | 200 | 99 | 9 | 272 | 467 | 375 | 540 | 5.82e-11 | 66.6 |
MS.gene22324.t1 | AT3G19700 | 28.497 | 193 | 105 | 8 | 282 | 469 | 730 | 894 | 7.13e-11 | 67.0 |
Find 163 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCTCCTGCTTTGATATTT+TGG | 0.080066 | 5.4:+4178209 | None:intergenic |
CTCTCAGATTCTGAGACTTT+TGG | 0.146039 | 5.4:+4177313 | None:intergenic |
ATCAAACTCACAAGATATTT+TGG | 0.164131 | 5.4:+4178163 | None:intergenic |
TTGATTCCCTTTGTTAATAT+TGG | 0.196770 | 5.4:+4177285 | None:intergenic |
CAAGCAAAAGTTGTTGGATT+TGG | 0.204645 | 5.4:-4178490 | MS.gene22324:CDS |
GAGATTTGGCAAACAATATT+TGG | 0.205668 | 5.4:-4179163 | MS.gene22324:CDS |
GATCCTAACAAAACACTAAT+TGG | 0.207436 | 5.4:+4178934 | None:intergenic |
AATTGCTTGCAAATTTCTTT+TGG | 0.212048 | 5.4:+4179138 | None:intergenic |
TCTCCTCACTTGGTAATCTT+TGG | 0.230174 | 5.4:+4178912 | None:intergenic |
GCTTATAAAGTTGTTGAAAA+AGG | 0.240086 | 5.4:-4177890 | MS.gene22324:CDS |
GTGTCATCAGAAATTGATTT+TGG | 0.241755 | 5.4:+4177695 | None:intergenic |
GTAGGATATTACAAGGATTA+AGG | 0.243595 | 5.4:+4178545 | None:intergenic |
TATTCCTACTATAGATAATA+AGG | 0.252638 | 5.4:-4177834 | MS.gene22324:CDS |
AAGAGATTAACCCTATAATT+TGG | 0.257480 | 5.4:-4178396 | MS.gene22324:CDS |
GTCCTCTTAGAGAGCTTTCC+AGG | 0.263161 | 5.4:-4179446 | MS.gene22324:CDS |
AACTGACCTTGGTCTTTCTT+TGG | 0.265277 | 5.4:+4177605 | None:intergenic |
GGTTACCAGATCTTTAATTA+TGG | 0.266121 | 5.4:+4177721 | None:intergenic |
CATAGATATTGCAATATGTT+TGG | 0.282076 | 5.4:+4178763 | None:intergenic |
TCAGGTGCATACCAAATTAT+AGG | 0.292831 | 5.4:+4178385 | None:intergenic |
CTGGTTTCTCATCTATTTGT+AGG | 0.294229 | 5.4:-4178105 | MS.gene22324:CDS |
TTTGTCTTTAACCTGTTAAA+TGG | 0.297516 | 5.4:+4177160 | None:intergenic |
CGGCACATTGGTGAGGTTCT+TGG | 0.303933 | 5.4:-4179633 | MS.gene22324:CDS |
TATGGTCATGTCTCAGATTA+AGG | 0.304997 | 5.4:-4176833 | None:intergenic |
TGGAAGTCTAAAAGCGCTTA+TGG | 0.306735 | 5.4:-4179613 | MS.gene22324:CDS |
TGAAACATGGCAGCATCTTC+TGG | 0.314429 | 5.4:+4177003 | None:intergenic |
AAAAGAAATTTGCAAGCAAT+TGG | 0.319977 | 5.4:-4179136 | MS.gene22324:CDS |
GGATTGTCATCTGTTGAAAA+TGG | 0.333696 | 5.4:-4178469 | MS.gene22324:CDS |
ATTCTTTGAAGAAGTGAGTT+TGG | 0.334226 | 5.4:+4179050 | None:intergenic |
GTCCTTTGATTGCTCACATA+TGG | 0.339488 | 5.4:+4176917 | None:intergenic |
AGCATTGTGAGGATGCAAAA+AGG | 0.341134 | 5.4:-4177067 | MS.gene22324:CDS |
CATTATCTGGTCGGGTTTCA+AGG | 0.346406 | 5.4:-4177399 | MS.gene22324:CDS |
ATTATACATTAAGCATTGTT+TGG | 0.350263 | 5.4:-4179406 | MS.gene22324:CDS |
TTGACACGTCTTATTCTTGT+TGG | 0.355333 | 5.4:+4177103 | None:intergenic |
GAAATTGATGAATGGTAATT+CGG | 0.363355 | 5.4:-4178998 | MS.gene22324:CDS |
TCGGGTTTCAAGGACAAATA+AGG | 0.364030 | 5.4:-4177389 | MS.gene22324:CDS |
TTTAAGGAAATTCAATGGTT+AGG | 0.370820 | 5.4:-4178868 | MS.gene22324:CDS |
GAGACCAATCACCATTTAAC+AGG | 0.371640 | 5.4:-4177171 | MS.gene22324:CDS |
ATTGTTTGGATTCAAAAGAT+TGG | 0.378122 | 5.4:-4179392 | MS.gene22324:CDS |
GTGAGAAAGTGATAACAAAT+TGG | 0.378799 | 5.4:+4178786 | None:intergenic |
TTCTTTGGCTTCATTTGTGA+TGG | 0.379395 | 5.4:+4177620 | None:intergenic |
TTAACCTGTTAAATGGTGAT+TGG | 0.382051 | 5.4:+4177167 | None:intergenic |
ATAGATATTGCAATATGTTT+GGG | 0.387928 | 5.4:+4178764 | None:intergenic |
AGTTCAAGCTGATTTAGTTC+AGG | 0.389760 | 5.4:+4178025 | None:intergenic |
ATCTCATGCTTCAAATGGCC+AGG | 0.399868 | 5.4:-4178609 | MS.gene22324:CDS |
TTGAAGACAGAACTACAAAA+TGG | 0.399911 | 5.4:-4179482 | MS.gene22324:CDS |
ATTGTAACATTCTTCTTTGA+CGG | 0.401100 | 5.4:+4177650 | None:intergenic |
TTGGATTCAAAAGATTGGTC+TGG | 0.401687 | 5.4:-4179387 | MS.gene22324:CDS |
TGAGGAGAAGATTGGGAAGG+GGG | 0.403016 | 5.4:-4178897 | MS.gene22324:CDS |
GGGTTAATCTCTTCACCAAT+TGG | 0.403263 | 5.4:+4178406 | None:intergenic |
CCATATGTTGTTCTTACATA+AGG | 0.409101 | 5.4:+4176851 | None:intergenic |
TACCAAGTGAGGAGAAGATT+GGG | 0.409714 | 5.4:-4178904 | MS.gene22324:CDS |
ACAGTAGCCACATCCTTTGT+TGG | 0.413590 | 5.4:+4177797 | None:intergenic |
TCATTACCACCAACATTATC+TGG | 0.424357 | 5.4:-4177412 | MS.gene22324:CDS |
ATGCTGCCATGTTTCAGATA+TGG | 0.424537 | 5.4:-4176996 | MS.gene22324:CDS |
GAGAATGCTGGGGAGATGTC+AGG | 0.427765 | 5.4:-4179273 | MS.gene22324:CDS |
TGGATTCAAAAGATTGGTCT+GGG | 0.432597 | 5.4:-4179386 | MS.gene22324:CDS |
TTATAAGCAAACATTTCATA+AGG | 0.434328 | 5.4:+4177905 | None:intergenic |
CATCTTCACAAACTGTGCTT+TGG | 0.436780 | 5.4:+4177753 | None:intergenic |
TGCATCCATAATTAAAGATC+TGG | 0.439192 | 5.4:-4177726 | MS.gene22324:CDS |
TTGTAACATTCTTCTTTGAC+GGG | 0.441892 | 5.4:+4177651 | None:intergenic |
CTCAAAGGGCTCAATGCTAA+TGG | 0.444928 | 5.4:+4176875 | None:intergenic |
CTCAAAGGACTCAATGGAAA+TGG | 0.446507 | 5.4:+4176941 | None:intergenic |
TTCCCAATCTTCTCCTCACT+TGG | 0.447928 | 5.4:+4178902 | None:intergenic |
ATTCCTACTATAGATAATAA+GGG | 0.450157 | 5.4:-4177833 | MS.gene22324:CDS |
TGAAAATGATTATCCTCAAA+AGG | 0.452553 | 5.4:+4178247 | None:intergenic |
GCAAGCAATTGGAGAATGCT+TGG | 0.459665 | 5.4:-4179125 | MS.gene22324:CDS |
GAGAACAAAATCTGTCTCCT+TGG | 0.464084 | 5.4:+4178649 | None:intergenic |
GGAGATGTCAGGGTTGGATC+AGG | 0.464317 | 5.4:-4179262 | MS.gene22324:CDS |
TTACCAAGTGAGGAGAAGAT+TGG | 0.469923 | 5.4:-4178905 | MS.gene22324:CDS |
AGGAATTTAAGGAAATTCAA+TGG | 0.476317 | 5.4:-4178873 | MS.gene22324:CDS |
ACCACCAACATTATCTGGTC+GGG | 0.478543 | 5.4:-4177407 | MS.gene22324:CDS |
CACCGCCAATGAGTCCTTCA+AGG | 0.481111 | 5.4:-4177033 | MS.gene22324:CDS |
AAAGCCGATGCATATAGCTT+TGG | 0.483467 | 5.4:-4178304 | MS.gene22324:CDS |
CAGGTGCATACCAAATTATA+GGG | 0.486379 | 5.4:+4178386 | None:intergenic |
TCACCAACACATAATCCAAT+TGG | 0.489553 | 5.4:-4178421 | MS.gene22324:CDS |
TTCACCTTCTTTGAATACCC+TGG | 0.491717 | 5.4:+4179428 | None:intergenic |
TACAAGGATTAAGGTTTCCA+TGG | 0.498240 | 5.4:+4178554 | None:intergenic |
TATGGACTCAAAGGACTCAA+TGG | 0.498751 | 5.4:+4176935 | None:intergenic |
CTACCCTTATTATCTATAGT+AGG | 0.503856 | 5.4:+4177830 | None:intergenic |
ACCAACCAAAATATCAAAGC+AGG | 0.507591 | 5.4:-4178214 | MS.gene22324:CDS |
GTTCTTACATAAGGACTCAA+AGG | 0.508350 | 5.4:+4176860 | None:intergenic |
ATTGAAGCGATCGAGAATGC+TGG | 0.508806 | 5.4:-4179285 | MS.gene22324:CDS |
CTTTCCAGGGTATTCAAAGA+AGG | 0.511780 | 5.4:-4179432 | MS.gene22324:CDS |
TCTAGCTCAGTTAAAACCTC+AGG | 0.514317 | 5.4:+4178367 | None:intergenic |
TTGAAGCGATCGAGAATGCT+GGG | 0.515187 | 5.4:-4179284 | MS.gene22324:CDS |
ACTGATCCGTCTCAGCGTCC+TGG | 0.518950 | 5.4:-4178124 | MS.gene22324:CDS |
CTTCTGGTGTATGACCTTGA+AGG | 0.519264 | 5.4:+4177019 | None:intergenic |
AGAATGCTTGGAGAGAAGAT+AGG | 0.519476 | 5.4:-4179113 | MS.gene22324:CDS |
AGTTGATGAACAAGGATTTG+TGG | 0.524686 | 5.4:-4178696 | MS.gene22324:CDS |
TGCTGGGGAGATGTCAGGGT+TGG | 0.526191 | 5.4:-4179268 | MS.gene22324:CDS |
GGAAATCCAATATTAACAAA+GGG | 0.528711 | 5.4:-4177291 | MS.gene22324:CDS |
CCTTATGTAAGAACAACATA+TGG | 0.529072 | 5.4:-4176851 | MS.gene22324:CDS |
CTATAACCCCAGTTAAAAGA+AGG | 0.532741 | 5.4:-4177339 | MS.gene22324:CDS |
AGGAAATCCAATATTAACAA+AGG | 0.532942 | 5.4:-4177292 | MS.gene22324:CDS |
ATATTATATGTCCTCTCCAC+AGG | 0.535682 | 5.4:+4177947 | None:intergenic |
TATGACCTTGAAGGACTCAT+TGG | 0.538589 | 5.4:+4177028 | None:intergenic |
CAAGAAAATATGATGTGGAA+TGG | 0.539842 | 5.4:-4179209 | MS.gene22324:CDS |
ACACAATCGCAGATGAGATA+AGG | 0.544064 | 5.4:-4179518 | MS.gene22324:CDS |
GTGCCGGAATGGAACAGCTC+CGG | 0.546196 | 5.4:-4179653 | None:intergenic |
TTTGTTCTCTATACCTGTGG+TGG | 0.547282 | 5.4:-4178635 | MS.gene22324:CDS |
GTAGATTGTTGTGACATTGA+AGG | 0.548073 | 5.4:-4177989 | MS.gene22324:CDS |
ATGCTTGGAGAGAAGATAGG+TGG | 0.548742 | 5.4:-4179110 | MS.gene22324:CDS |
TATAATTTGGTATGCACCTG+AGG | 0.550991 | 5.4:-4178383 | MS.gene22324:CDS |
TTCTTACATAAGGACTCAAA+GGG | 0.551714 | 5.4:+4176861 | None:intergenic |
GGTTGATCTCATGCTTCAAA+TGG | 0.555778 | 5.4:-4178614 | MS.gene22324:CDS |
AACATATTGCAATATCTATG+TGG | 0.560041 | 5.4:-4178760 | MS.gene22324:CDS |
ACCCTGGAAAGCTCTCTAAG+AGG | 0.560256 | 5.4:+4179444 | None:intergenic |
ATGGAACAGCTCCGGCACAT+TGG | 0.561500 | 5.4:-4179645 | MS.gene22324:CDS |
AGCAATCAAAGGACTAGAAG+AGG | 0.562315 | 5.4:-4176908 | MS.gene22324:CDS |
GGCGAGCGATATGGAAACAA+AGG | 0.564210 | 5.4:+4178184 | None:intergenic |
CAAGAACCTCACCAATGTGC+CGG | 0.564531 | 5.4:+4179634 | None:intergenic |
GTGGAGATATTCAATGCCCC+TGG | 0.567677 | 5.4:+4178591 | None:intergenic |
TCAATGTCACAACAATCTAC+AGG | 0.568956 | 5.4:+4177992 | None:intergenic |
GACCTTGAAGGACTCATTGG+CGG | 0.570717 | 5.4:+4177031 | None:intergenic |
TTGTTGAAGAAATTGATGAA+TGG | 0.570718 | 5.4:-4179006 | MS.gene22324:CDS |
TCACCAATTGGATTATGTGT+TGG | 0.571772 | 5.4:+4178418 | None:intergenic |
GAGAAACCAGGACGCTGAGA+CGG | 0.572704 | 5.4:+4178118 | None:intergenic |
TACCACCAACATTATCTGGT+CGG | 0.572730 | 5.4:-4177408 | MS.gene22324:CDS |
GTCTGAGCCAACAAAGGATG+TGG | 0.574953 | 5.4:-4177804 | MS.gene22324:CDS |
TTGCTCACATATGGACTCAA+AGG | 0.582014 | 5.4:+4176926 | None:intergenic |
TCTCATGCTTCAAATGGCCA+GGG | 0.583448 | 5.4:-4178608 | MS.gene22324:CDS |
AGTGAGGAGAAGATTGGGAA+GGG | 0.587219 | 5.4:-4178899 | MS.gene22324:CDS |
TCGATCGCTTCAATAACCGC+AGG | 0.587690 | 5.4:+4179294 | None:intergenic |
GTGAGGAGAAGATTGGGAAG+GGG | 0.591731 | 5.4:-4178898 | MS.gene22324:CDS |
GAGGCTCATAGAAGCACTCA+AGG | 0.595114 | 5.4:-4179088 | MS.gene22324:CDS |
GTCCATATGTGAGCAATCAA+AGG | 0.596259 | 5.4:-4176919 | MS.gene22324:CDS |
CATACCAAAGCTATATGCAT+CGG | 0.599646 | 5.4:+4178300 | None:intergenic |
AAAGCTAGAAACTCACAAGA+AGG | 0.600879 | 5.4:-4178520 | MS.gene22324:CDS |
AACTTGATGTCAATGATGAC+TGG | 0.601724 | 5.4:+4177362 | None:intergenic |
AGAATGCTGGGGAGATGTCA+GGG | 0.601811 | 5.4:-4179272 | MS.gene22324:CDS |
TGAGAGAGAATTGTGGTCCA+AGG | 0.604253 | 5.4:-4178666 | MS.gene22324:CDS |
TCCTCTTAGAGAGCTTTCCA+GGG | 0.606681 | 5.4:-4179445 | MS.gene22324:CDS |
TTTCTCTGAGTACTTACAAG+AGG | 0.613541 | 5.4:+4178324 | None:intergenic |
ACCCGACCAGATAATGTTGG+TGG | 0.618092 | 5.4:+4177406 | None:intergenic |
AGCATGAGATCAACCACCAC+AGG | 0.618436 | 5.4:+4178622 | None:intergenic |
CTTGGAGAGAAGATAGGTGG+AGG | 0.618932 | 5.4:-4179107 | MS.gene22324:CDS |
AAAATATCAAAGCAGGAGAG+AGG | 0.620693 | 5.4:-4178207 | MS.gene22324:CDS |
GAAACCCGACCAGATAATGT+TGG | 0.622199 | 5.4:+4177403 | None:intergenic |
CTACAAATAGATGAGAAACC+AGG | 0.623694 | 5.4:+4178106 | None:intergenic |
AACTATCCATATCTGAAACA+TGG | 0.625924 | 5.4:+4176990 | None:intergenic |
ACAGTAATGATAAGGTATTG+TGG | 0.632731 | 5.4:-4178957 | MS.gene22324:CDS |
ATGTCACAACAATCTACAGG+TGG | 0.639302 | 5.4:+4177995 | None:intergenic |
ATGCTAGAGTGAATATGTCG+TGG | 0.640538 | 5.4:+4179544 | None:intergenic |
AGGATTGATCAAAACATACT+CGG | 0.640765 | 5.4:+4178045 | None:intergenic |
CAAAAGTCTCAGAATCTGAG+AGG | 0.650694 | 5.4:-4177312 | MS.gene22324:CDS |
TCTCTAAGAGGACATTCAAG+AGG | 0.651164 | 5.4:+4179456 | None:intergenic |
ACAGCTCCGGCACATTGGTG+AGG | 0.651948 | 5.4:-4179640 | MS.gene22324:CDS |
GCTTGCAAGAAAATATGATG+TGG | 0.653459 | 5.4:-4179214 | MS.gene22324:CDS |
TAGTGAGTCTGAGCCAACAA+AGG | 0.653550 | 5.4:-4177810 | MS.gene22324:CDS |
CGATCGCTTCAATAACCGCA+GGG | 0.654532 | 5.4:+4179295 | None:intergenic |
AAGTGAGGAGAAGATTGGGA+AGG | 0.655591 | 5.4:-4178900 | MS.gene22324:CDS |
AATTGGATTATGTGTTGGTG+AGG | 0.655784 | 5.4:+4178423 | None:intergenic |
TGTGACGGAGTTGATGAACA+AGG | 0.656381 | 5.4:-4178704 | MS.gene22324:CDS |
CTCATGCTTCAAATGGCCAG+GGG | 0.668271 | 5.4:-4178607 | MS.gene22324:CDS |
GATCCAAAGATTACCAAGTG+AGG | 0.673638 | 5.4:-4178915 | MS.gene22324:CDS |
ATGAAGCCAAAGAAAGACCA+AGG | 0.681190 | 5.4:-4177611 | MS.gene22324:intron |
TGTAACATTCTTCTTTGACG+GGG | 0.687811 | 5.4:+4177652 | None:intergenic |
GTACTAACAACAGCATTGTG+AGG | 0.690491 | 5.4:-4177078 | MS.gene22324:CDS |
GATAGTTCTTTGAAGATACG+AGG | 0.692687 | 5.4:-4176974 | MS.gene22324:CDS |
TGTCACAACAATCTACAGGT+GGG | 0.697110 | 5.4:+4177996 | None:intergenic |
TGAAGCGATCGAGAATGCTG+GGG | 0.704654 | 5.4:-4179283 | MS.gene22324:CDS |
TTTGCTTTGCTATTTCCCTG+CGG | 0.707457 | 5.4:-4179310 | MS.gene22324:CDS |
ACATACATGAGAGAGAATTG+TGG | 0.732943 | 5.4:-4178673 | MS.gene22324:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATAGC+AGG | + | chr5.4:4178928-4178947 | None:intergenic | 10.0% |
!! | ATAGATATTGCAATATGTTT+GGG | + | chr5.4:4177719-4177738 | None:intergenic | 20.0% |
!! | ATTCCTACTATAGATAATAA+GGG | - | chr5.4:4178647-4178666 | MS.gene22324:CDS | 20.0% |
!! | CTTATAAAGTTGTTGAAAAA+GGG | - | chr5.4:4178591-4178610 | MS.gene22324:CDS | 20.0% |
!! | TATTCCTACTATAGATAATA+AGG | - | chr5.4:4178646-4178665 | MS.gene22324:CDS | 20.0% |
!! | TTATAAGCAAACATTTCATA+AGG | + | chr5.4:4178578-4178597 | None:intergenic | 20.0% |
!!! | ATTATACATTAAGCATTGTT+TGG | - | chr5.4:4177074-4177093 | MS.gene22324:CDS | 20.0% |
!!! | TCAGTTAGAAAAAAAGTATA+TGG | - | chr5.4:4179242-4179261 | MS.gene22324:CDS | 20.0% |
! | AAAAGAAATTTGCAAGCAAT+TGG | - | chr5.4:4177344-4177363 | MS.gene22324:CDS | 25.0% |
! | AACATATTGCAATATCTATG+TGG | - | chr5.4:4177720-4177739 | MS.gene22324:CDS | 25.0% |
! | AAGAGATTAACCCTATAATT+TGG | - | chr5.4:4178084-4178103 | MS.gene22324:CDS | 25.0% |
! | AGGAAATCCAATATTAACAA+AGG | - | chr5.4:4179188-4179207 | MS.gene22324:CDS | 25.0% |
! | AGGAATTTAAGGAAATTCAA+TGG | - | chr5.4:4177607-4177626 | MS.gene22324:intron | 25.0% |
! | ATTGTAACATTCTTCTTTGA+CGG | + | chr5.4:4178833-4178852 | None:intergenic | 25.0% |
! | ATTGTTTGGATTCAAAAGAT+TGG | - | chr5.4:4177088-4177107 | MS.gene22324:CDS | 25.0% |
! | CAATAAAATTAAACTGACCT+TGG | + | chr5.4:4178889-4178908 | None:intergenic | 25.0% |
! | CATAGATATTGCAATATGTT+TGG | + | chr5.4:4177720-4177739 | None:intergenic | 25.0% |
! | GAAATTGATGAATGGTAATT+CGG | - | chr5.4:4177482-4177501 | MS.gene22324:intron | 25.0% |
! | GCTTATAAAGTTGTTGAAAA+AGG | - | chr5.4:4178590-4178609 | MS.gene22324:CDS | 25.0% |
! | GGAAATCCAATATTAACAAA+GGG | - | chr5.4:4179189-4179208 | MS.gene22324:CDS | 25.0% |
! | TCACAAAAACAGTAATGATA+AGG | - | chr5.4:4177515-4177534 | MS.gene22324:intron | 25.0% |
! | TGAAAATGATTATCCTCAAA+AGG | + | chr5.4:4178236-4178255 | None:intergenic | 25.0% |
! | TGAGTTTGATCAAAAAATGT+TGG | - | chr5.4:4178330-4178349 | MS.gene22324:CDS | 25.0% |
! | TGTATTGAATTGATTGAAAC+AGG | - | chr5.4:4179020-4179039 | MS.gene22324:CDS | 25.0% |
! | TTGATTCCCTTTGTTAATAT+TGG | + | chr5.4:4179198-4179217 | None:intergenic | 25.0% |
! | TTGTTGAAGAAATTGATGAA+TGG | - | chr5.4:4177474-4177493 | MS.gene22324:intron | 25.0% |
! | TTTAAGGAAATTCAATGGTT+AGG | - | chr5.4:4177612-4177631 | MS.gene22324:CDS | 25.0% |
! | TTTGTCTTTAACCTGTTAAA+TGG | + | chr5.4:4179323-4179342 | None:intergenic | 25.0% |
!! | AATTGCTTGCAAATTTCTTT+TGG | + | chr5.4:4177345-4177364 | None:intergenic | 25.0% |
!! | ATCAAACTCACAAGATATTT+TGG | + | chr5.4:4178320-4178339 | None:intergenic | 25.0% |
!! | GTTAGAAAAAAAGTATATGG+AGG | - | chr5.4:4179245-4179264 | MS.gene22324:CDS | 25.0% |
!! | TTGAGGATAATCATTTTCAA+GGG | - | chr5.4:4178237-4178256 | MS.gene22324:CDS | 25.0% |
!! | TTTGAGGATAATCATTTTCA+AGG | - | chr5.4:4178236-4178255 | MS.gene22324:CDS | 25.0% |
!!! | ATCAGAAATTGATTTTGGAT+AGG | + | chr5.4:4178783-4178802 | None:intergenic | 25.0% |
!!! | CTTGTTTTCAGATTTAAACT+AGG | + | chr5.4:4179290-4179309 | None:intergenic | 25.0% |
!!! | TATTTTCAAGCAAAAGTTGT+TGG | - | chr5.4:4177984-4178003 | MS.gene22324:CDS | 25.0% |
AGGATTGATCAAAACATACT+CGG | + | chr5.4:4178438-4178457 | None:intergenic | 30.0% | |
CAAGAAAATATGATGTGGAA+TGG | - | chr5.4:4177271-4177290 | MS.gene22324:CDS | 30.0% | |
CCATATGTTGTTCTTACATA+AGG | + | chr5.4:4179632-4179651 | None:intergenic | 30.0% | |
CCTTATGTAAGAACAACATA+TGG | - | chr5.4:4179629-4179648 | MS.gene22324:CDS | 30.0% | |
CTACCCTTATTATCTATAGT+AGG | + | chr5.4:4178653-4178672 | None:intergenic | 30.0% | |
GAGATTTGGCAAACAATATT+TGG | - | chr5.4:4177317-4177336 | MS.gene22324:CDS | 30.0% | |
GATCCTAACAAAACACTAAT+TGG | + | chr5.4:4177549-4177568 | None:intergenic | 30.0% | |
GGTTACCAGATCTTTAATTA+TGG | + | chr5.4:4178762-4178781 | None:intergenic | 30.0% | |
GTAGGATATTACAAGGATTA+AGG | + | chr5.4:4177938-4177957 | None:intergenic | 30.0% | |
GTGAGAAAGTGATAACAAAT+TGG | + | chr5.4:4177697-4177716 | None:intergenic | 30.0% | |
TGCATCCATAATTAAAGATC+TGG | - | chr5.4:4178754-4178773 | MS.gene22324:CDS | 30.0% | |
TTAACCTGTTAAATGGTGAT+TGG | + | chr5.4:4179316-4179335 | None:intergenic | 30.0% | |
TTCTTACATAAGGACTCAAA+GGG | + | chr5.4:4179622-4179641 | None:intergenic | 30.0% | |
TTGAAGACAGAACTACAAAA+TGG | - | chr5.4:4176998-4177017 | MS.gene22324:CDS | 30.0% | |
TTGTAACATTCTTCTTTGAC+GGG | + | chr5.4:4178832-4178851 | None:intergenic | 30.0% | |
! | AACTATCCATATCTGAAACA+TGG | + | chr5.4:4179493-4179512 | None:intergenic | 30.0% |
! | AATCTCCACTGAAAAAGTTT+TGG | + | chr5.4:4177303-4177322 | None:intergenic | 30.0% |
! | ATTCTTTGAAGAAGTGAGTT+TGG | + | chr5.4:4177433-4177452 | None:intergenic | 30.0% |
! | GCTTTTAGTAGGATATTACA+AGG | + | chr5.4:4177945-4177964 | None:intergenic | 30.0% |
! | GTTTCCATGGTAAATGTTTT+TGG | + | chr5.4:4177916-4177935 | None:intergenic | 30.0% |
!! | ACAGTAATGATAAGGTATTG+TGG | - | chr5.4:4177523-4177542 | MS.gene22324:intron | 30.0% |
!! | GATTTTGTTGCTTGCAATTT+AGG | + | chr5.4:4179050-4179069 | None:intergenic | 30.0% |
!! | GTGTCATCAGAAATTGATTT+TGG | + | chr5.4:4178788-4178807 | None:intergenic | 30.0% |
!!! | AAACTTTTTCAGTGGAGATT+TGG | - | chr5.4:4177303-4177322 | MS.gene22324:CDS | 30.0% |
!!! | ATATGTTTTGAGTTGTTGAC+AGG | - | chr5.4:4178203-4178222 | MS.gene22324:CDS | 30.0% |
!!! | ATGATCCAAAACTTTTTCAG+TGG | - | chr5.4:4177295-4177314 | MS.gene22324:CDS | 30.0% |
!!! | TATGTTTTGAGTTGTTGACA+GGG | - | chr5.4:4178204-4178223 | MS.gene22324:CDS | 30.0% |
AAAATATCAAAGCAGGAGAG+AGG | - | chr5.4:4178273-4178292 | MS.gene22324:CDS | 35.0% | |
AAAGCTAGAAACTCACAAGA+AGG | - | chr5.4:4177960-4177979 | MS.gene22324:CDS | 35.0% | |
AACTTGATGTCAATGATGAC+TGG | + | chr5.4:4179121-4179140 | None:intergenic | 35.0% | |
ACATACATGAGAGAGAATTG+TGG | - | chr5.4:4177807-4177826 | MS.gene22324:CDS | 35.0% | |
ACCAACCAAAATATCAAAGC+AGG | - | chr5.4:4178266-4178285 | MS.gene22324:CDS | 35.0% | |
ATATTATATGTCCTCTCCAC+AGG | + | chr5.4:4178536-4178555 | None:intergenic | 35.0% | |
CAAGCAAAAGTTGTTGGATT+TGG | - | chr5.4:4177990-4178009 | MS.gene22324:CDS | 35.0% | |
CACTCCAAAAACATTTACCA+TGG | - | chr5.4:4177909-4177928 | MS.gene22324:CDS | 35.0% | |
CAGGTGCATACCAAATTATA+GGG | + | chr5.4:4178097-4178116 | None:intergenic | 35.0% | |
CATACCAAAGCTATATGCAT+CGG | + | chr5.4:4178183-4178202 | None:intergenic | 35.0% | |
CTACAAATAGATGAGAAACC+AGG | + | chr5.4:4178377-4178396 | None:intergenic | 35.0% | |
CTATAACCCCAGTTAAAAGA+AGG | - | chr5.4:4179141-4179160 | MS.gene22324:CDS | 35.0% | |
CTGGTTTCTCATCTATTTGT+AGG | - | chr5.4:4178375-4178394 | MS.gene22324:CDS | 35.0% | |
GCTTGCAAGAAAATATGATG+TGG | - | chr5.4:4177266-4177285 | MS.gene22324:CDS | 35.0% | |
GGATTGTCATCTGTTGAAAA+TGG | - | chr5.4:4178011-4178030 | MS.gene22324:CDS | 35.0% | |
GTAGATTGTTGTGACATTGA+AGG | - | chr5.4:4178491-4178510 | MS.gene22324:CDS | 35.0% | |
GTTCTTACATAAGGACTCAA+AGG | + | chr5.4:4179623-4179642 | None:intergenic | 35.0% | |
TACAAGGATTAAGGTTTCCA+TGG | + | chr5.4:4177929-4177948 | None:intergenic | 35.0% | |
TATAATTTGGTATGCACCTG+AGG | - | chr5.4:4178097-4178116 | MS.gene22324:CDS | 35.0% | |
TCAATGTCACAACAATCTAC+AGG | + | chr5.4:4178491-4178510 | None:intergenic | 35.0% | |
TCACCAACACATAATCCAAT+TGG | - | chr5.4:4178059-4178078 | MS.gene22324:CDS | 35.0% | |
TCACCAATTGGATTATGTGT+TGG | + | chr5.4:4178065-4178084 | None:intergenic | 35.0% | |
TCAGGTGCATACCAAATTAT+AGG | + | chr5.4:4178098-4178117 | None:intergenic | 35.0% | |
TCATTACCACCAACATTATC+TGG | - | chr5.4:4179068-4179087 | MS.gene22324:CDS | 35.0% | |
TGTAACATTCTTCTTTGACG+GGG | + | chr5.4:4178831-4178850 | None:intergenic | 35.0% | |
TTTCTCTGAGTACTTACAAG+AGG | + | chr5.4:4178159-4178178 | None:intergenic | 35.0% | |
! | AATTGGATTATGTGTTGGTG+AGG | + | chr5.4:4178060-4178079 | None:intergenic | 35.0% |
! | AGTTCAAGCTGATTTAGTTC+AGG | + | chr5.4:4178458-4178477 | None:intergenic | 35.0% |
! | GAAAGAGTTTTCTCTTGTGA+CGG | - | chr5.4:4177761-4177780 | MS.gene22324:CDS | 35.0% |
! | GATAGTTCTTTGAAGATACG+AGG | - | chr5.4:4179506-4179525 | MS.gene22324:CDS | 35.0% |
! | GATTTTGTTCTCTATACCTG+TGG | - | chr5.4:4177842-4177861 | MS.gene22324:CDS | 35.0% |
! | TCTCTCCTGCTTTGATATTT+TGG | + | chr5.4:4178274-4178293 | None:intergenic | 35.0% |
! | TTCTTTGGCTTCATTTGTGA+TGG | + | chr5.4:4178863-4178882 | None:intergenic | 35.0% |
! | TTGACACGTCTTATTCTTGT+TGG | + | chr5.4:4179380-4179399 | None:intergenic | 35.0% |
! | TTGGATTCAAAAGATTGGTC+TGG | - | chr5.4:4177093-4177112 | MS.gene22324:CDS | 35.0% |
! | TTTTCTCAAGAGTTTTCCTG+TGG | - | chr5.4:4178517-4178536 | MS.gene22324:CDS | 35.0% |
!! | AGTTGATGAACAAGGATTTG+TGG | - | chr5.4:4177784-4177803 | MS.gene22324:CDS | 35.0% |
!! | TGGATTCAAAAGATTGGTCT+GGG | - | chr5.4:4177094-4177113 | MS.gene22324:CDS | 35.0% |
!! | TGGCCAATTAGTGTTTTGTT+AGG | - | chr5.4:4177543-4177562 | MS.gene22324:intron | 35.0% |
!!! | CATGGTAAATGTTTTTGGAG+TGG | + | chr5.4:4177911-4177930 | None:intergenic | 35.0% |
!!! | GTGAGTTTCTAGCTTTTAGT+AGG | + | chr5.4:4177956-4177975 | None:intergenic | 35.0% |
!!! | TCCTGCTTTGATATTTTGGT+TGG | + | chr5.4:4178270-4178289 | None:intergenic | 35.0% |
AAAGCCGATGCATATAGCTT+TGG | - | chr5.4:4178176-4178195 | MS.gene22324:CDS | 40.0% | |
ACACAATCGCAGATGAGATA+AGG | - | chr5.4:4176962-4176981 | MS.gene22324:CDS | 40.0% | |
AGAATGCTTGGAGAGAAGAT+AGG | - | chr5.4:4177367-4177386 | MS.gene22324:CDS | 40.0% | |
AGCAATCAAAGGACTAGAAG+AGG | - | chr5.4:4179572-4179591 | MS.gene22324:CDS | 40.0% | |
AGCATTGTGAGGATGCAAAA+AGG | - | chr5.4:4179413-4179432 | MS.gene22324:CDS | 40.0% | |
ATGAAGCCAAAGAAAGACCA+AGG | - | chr5.4:4178869-4178888 | MS.gene22324:CDS | 40.0% | |
ATGCTAGAGTGAATATGTCG+TGG | + | chr5.4:4176939-4176958 | None:intergenic | 40.0% | |
ATGCTGCCATGTTTCAGATA+TGG | - | chr5.4:4179484-4179503 | MS.gene22324:CDS | 40.0% | |
ATGTCACAACAATCTACAGG+TGG | + | chr5.4:4178488-4178507 | None:intergenic | 40.0% | |
CAAAAGTCTCAGAATCTGAG+AGG | - | chr5.4:4179168-4179187 | MS.gene22324:CDS | 40.0% | |
CATCTTCACAAACTGTGCTT+TGG | + | chr5.4:4178730-4178749 | None:intergenic | 40.0% | |
CTCAAAGGACTCAATGGAAA+TGG | + | chr5.4:4179542-4179561 | None:intergenic | 40.0% | |
GAGAACAAAATCTGTCTCCT+TGG | + | chr5.4:4177834-4177853 | None:intergenic | 40.0% | |
GAGACCAATCACCATTTAAC+AGG | - | chr5.4:4179309-4179328 | MS.gene22324:CDS | 40.0% | |
GATCCAAAGATTACCAAGTG+AGG | - | chr5.4:4177565-4177584 | MS.gene22324:intron | 40.0% | |
GCATTGTGAGGATGCAAAAA+GGG | - | chr5.4:4179414-4179433 | MS.gene22324:CDS | 40.0% | |
GGGTTAATCTCTTCACCAAT+TGG | + | chr5.4:4178077-4178096 | None:intergenic | 40.0% | |
GGTTGATCTCATGCTTCAAA+TGG | - | chr5.4:4177866-4177885 | MS.gene22324:CDS | 40.0% | |
GTACTAACAACAGCATTGTG+AGG | - | chr5.4:4179402-4179421 | MS.gene22324:CDS | 40.0% | |
GTCCATATGTGAGCAATCAA+AGG | - | chr5.4:4179561-4179580 | MS.gene22324:CDS | 40.0% | |
GTCCTTTGATTGCTCACATA+TGG | + | chr5.4:4179566-4179585 | None:intergenic | 40.0% | |
TACCAAGTGAGGAGAAGATT+GGG | - | chr5.4:4177576-4177595 | MS.gene22324:intron | 40.0% | |
TACCACCAACATTATCTGGT+CGG | - | chr5.4:4179072-4179091 | MS.gene22324:CDS | 40.0% | |
TATGACCTTGAAGGACTCAT+TGG | + | chr5.4:4179455-4179474 | None:intergenic | 40.0% | |
TATGGACTCAAAGGACTCAA+TGG | + | chr5.4:4179548-4179567 | None:intergenic | 40.0% | |
TCGGGTTTCAAGGACAAATA+AGG | - | chr5.4:4179091-4179110 | MS.gene22324:CDS | 40.0% | |
TGTCACAACAATCTACAGGT+GGG | + | chr5.4:4178487-4178506 | None:intergenic | 40.0% | |
TTACCAAGTGAGGAGAAGAT+TGG | - | chr5.4:4177575-4177594 | MS.gene22324:intron | 40.0% | |
TTCACCTTCTTTGAATACCC+TGG | + | chr5.4:4177055-4177074 | None:intergenic | 40.0% | |
TTGCTCACATATGGACTCAA+AGG | + | chr5.4:4179557-4179576 | None:intergenic | 40.0% | |
TTTGTTCTCTATACCTGTGG+TGG | - | chr5.4:4177845-4177864 | MS.gene22324:CDS | 40.0% | |
! | AACTGACCTTGGTCTTTCTT+TGG | + | chr5.4:4178878-4178897 | None:intergenic | 40.0% |
! | CTTTCCAGGGTATTCAAAGA+AGG | - | chr5.4:4177048-4177067 | MS.gene22324:CDS | 40.0% |
! | GAAGCACTCAAGGAGAAAAA+AGG | - | chr5.4:4177402-4177421 | MS.gene22324:CDS | 40.0% |
! | GACAGGGAAAATTCCTTTTG+AGG | - | chr5.4:4178220-4178239 | MS.gene22324:CDS | 40.0% |
! | TAGGACAAAGTTTTGCTCTG+AGG | - | chr5.4:4177631-4177650 | MS.gene22324:CDS | 40.0% |
! | TCTAGCTCAGTTAAAACCTC+AGG | + | chr5.4:4178116-4178135 | None:intergenic | 40.0% |
! | TCTCCTCACTTGGTAATCTT+TGG | + | chr5.4:4177571-4177590 | None:intergenic | 40.0% |
! | TCTCTAAGAGGACATTCAAG+AGG | + | chr5.4:4177027-4177046 | None:intergenic | 40.0% |
! | TTTGGAGGCCTTCTTTTAAC+TGG | + | chr5.4:4179152-4179171 | None:intergenic | 40.0% |
!! | TGGAAGTCTAAAAGCGCTTA+TGG | - | chr5.4:4176867-4176886 | MS.gene22324:CDS | 40.0% |
!! | TTGGAGGCCTTCTTTTAACT+GGG | + | chr5.4:4179151-4179170 | None:intergenic | 40.0% |
!! | TTTGCTTTGCTATTTCCCTG+CGG | - | chr5.4:4177170-4177189 | MS.gene22324:CDS | 40.0% |
!!! | AGATATTTTGGCGAGCGATA+TGG | + | chr5.4:4178308-4178327 | None:intergenic | 40.0% |
!!! | CTCTCAGATTCTGAGACTTT+TGG | + | chr5.4:4179170-4179189 | None:intergenic | 40.0% |
!!! | TCAGATTCTGAGACTTTTGG+AGG | + | chr5.4:4179167-4179186 | None:intergenic | 40.0% |
!!! | TTGCTCTGAGGCATTTTCTT+GGG | - | chr5.4:4177643-4177662 | MS.gene22324:CDS | 40.0% |
!!! | TTTGCTCTGAGGCATTTTCT+TGG | - | chr5.4:4177642-4177661 | MS.gene22324:CDS | 40.0% |
AAGTGAGGAGAAGATTGGGA+AGG | - | chr5.4:4177580-4177599 | MS.gene22324:intron | 45.0% | |
ACAGTAGCCACATCCTTTGT+TGG | + | chr5.4:4178686-4178705 | None:intergenic | 45.0% | |
ACCACCAACATTATCTGGTC+GGG | - | chr5.4:4179073-4179092 | MS.gene22324:CDS | 45.0% | |
AGTGAGGAGAAGATTGGGAA+GGG | - | chr5.4:4177581-4177600 | MS.gene22324:intron | 45.0% | |
ATCTCATGCTTCAAATGGCC+AGG | - | chr5.4:4177871-4177890 | MS.gene22324:CDS | 45.0% | |
ATGCTTGGAGAGAAGATAGG+TGG | - | chr5.4:4177370-4177389 | MS.gene22324:CDS | 45.0% | |
ATTGAAGCGATCGAGAATGC+TGG | - | chr5.4:4177195-4177214 | MS.gene22324:CDS | 45.0% | |
CATTATCTGGTCGGGTTTCA+AGG | - | chr5.4:4179081-4179100 | MS.gene22324:CDS | 45.0% | |
CTCAAAGGGCTCAATGCTAA+TGG | + | chr5.4:4179608-4179627 | None:intergenic | 45.0% | |
CTTCTGGTGTATGACCTTGA+AGG | + | chr5.4:4179464-4179483 | None:intergenic | 45.0% | |
GAAACCCGACCAGATAATGT+TGG | + | chr5.4:4179080-4179099 | None:intergenic | 45.0% | |
GCAAGCAATTGGAGAATGCT+TGG | - | chr5.4:4177355-4177374 | MS.gene22324:CDS | 45.0% | |
TAGTGAGTCTGAGCCAACAA+AGG | - | chr5.4:4178670-4178689 | MS.gene22324:CDS | 45.0% | |
TCCTCTTAGAGAGCTTTCCA+GGG | - | chr5.4:4177035-4177054 | MS.gene22324:CDS | 45.0% | |
TCTCATGCTTCAAATGGCCA+GGG | - | chr5.4:4177872-4177891 | MS.gene22324:CDS | 45.0% | |
TGAAACATGGCAGCATCTTC+TGG | + | chr5.4:4179480-4179499 | None:intergenic | 45.0% | |
TGAGAGAGAATTGTGGTCCA+AGG | - | chr5.4:4177814-4177833 | MS.gene22324:CDS | 45.0% | |
TTCCCAATCTTCTCCTCACT+TGG | + | chr5.4:4177581-4177600 | None:intergenic | 45.0% | |
TTGAAGCGATCGAGAATGCT+GGG | - | chr5.4:4177196-4177215 | MS.gene22324:CDS | 45.0% | |
! | TCAAGAGTTTTCCTGTGGAG+AGG | - | chr5.4:4178522-4178541 | MS.gene22324:CDS | 45.0% |
!! | TGGAGGCCTTCTTTTAACTG+GGG | + | chr5.4:4179150-4179169 | None:intergenic | 45.0% |
!! | TGTGACGGAGTTGATGAACA+AGG | - | chr5.4:4177776-4177795 | MS.gene22324:CDS | 45.0% |
!!! | TGCTCTGAGGCATTTTCTTG+GGG | - | chr5.4:4177644-4177663 | MS.gene22324:CDS | 45.0% |
ACCCGACCAGATAATGTTGG+TGG | + | chr5.4:4179077-4179096 | None:intergenic | 50.0% | |
ACCCTGGAAAGCTCTCTAAG+AGG | + | chr5.4:4177039-4177058 | None:intergenic | 50.0% | |
AGAATGCTGGGGAGATGTCA+GGG | - | chr5.4:4177208-4177227 | MS.gene22324:CDS | 50.0% | |
AGCATGAGATCAACCACCAC+AGG | + | chr5.4:4177861-4177880 | None:intergenic | 50.0% | |
CAAGAACCTCACCAATGTGC+CGG | + | chr5.4:4176849-4176868 | None:intergenic | 50.0% | |
CGATCGCTTCAATAACCGCA+GGG | + | chr5.4:4177188-4177207 | None:intergenic | 50.0% | |
CTCATGCTTCAAATGGCCAG+GGG | - | chr5.4:4177873-4177892 | MS.gene22324:CDS | 50.0% | |
CTTGGAGAGAAGATAGGTGG+AGG | - | chr5.4:4177373-4177392 | MS.gene22324:CDS | 50.0% | |
GACCTTGAAGGACTCATTGG+CGG | + | chr5.4:4179452-4179471 | None:intergenic | 50.0% | |
GGCGAGCGATATGGAAACAA+AGG | + | chr5.4:4178299-4178318 | None:intergenic | 50.0% | |
GGGAAGGGGGAAGGAATTTA+AGG | - | chr5.4:4177596-4177615 | MS.gene22324:intron | 50.0% | |
GTCCTCTTAGAGAGCTTTCC+AGG | - | chr5.4:4177034-4177053 | MS.gene22324:CDS | 50.0% | |
GTCTGAGCCAACAAAGGATG+TGG | - | chr5.4:4178676-4178695 | MS.gene22324:CDS | 50.0% | |
GTGAGGAGAAGATTGGGAAG+GGG | - | chr5.4:4177582-4177601 | MS.gene22324:intron | 50.0% | |
GTGGAGATATTCAATGCCCC+TGG | + | chr5.4:4177892-4177911 | None:intergenic | 50.0% | |
TCGATCGCTTCAATAACCGC+AGG | + | chr5.4:4177189-4177208 | None:intergenic | 50.0% | |
TGAAGCGATCGAGAATGCTG+GGG | - | chr5.4:4177197-4177216 | MS.gene22324:CDS | 50.0% | |
TGAGGAGAAGATTGGGAAGG+GGG | - | chr5.4:4177583-4177602 | MS.gene22324:intron | 50.0% | |
!! | GAGGCTCATAGAAGCACTCA+AGG | - | chr5.4:4177392-4177411 | MS.gene22324:CDS | 50.0% |
ATGGAACAGCTCCGGCACAT+TGG | - | chr5.4:4176835-4176854 | MS.gene22324:CDS | 55.0% | |
CACCGCCAATGAGTCCTTCA+AGG | - | chr5.4:4179447-4179466 | MS.gene22324:CDS | 55.0% | |
CGGCACATTGGTGAGGTTCT+TGG | - | chr5.4:4176847-4176866 | MS.gene22324:CDS | 55.0% | |
GAGAAACCAGGACGCTGAGA+CGG | + | chr5.4:4178365-4178384 | None:intergenic | 55.0% | |
GAGAAGATTGGGAAGGGGGA+AGG | - | chr5.4:4177587-4177606 | MS.gene22324:intron | 55.0% | |
GAGAATGCTGGGGAGATGTC+AGG | - | chr5.4:4177207-4177226 | MS.gene22324:CDS | 55.0% | |
GGAGATGTCAGGGTTGGATC+AGG | - | chr5.4:4177218-4177237 | MS.gene22324:CDS | 55.0% | |
ACAGCTCCGGCACATTGGTG+AGG | - | chr5.4:4176840-4176859 | MS.gene22324:CDS | 60.0% | |
ACTGATCCGTCTCAGCGTCC+TGG | - | chr5.4:4178356-4178375 | MS.gene22324:CDS | 60.0% | |
TGCTGGGGAGATGTCAGGGT+TGG | - | chr5.4:4177212-4177231 | MS.gene22324:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 4176835 | 4179667 | 4176835 | ID=MS.gene22324 |
chr5.4 | mRNA | 4176835 | 4179667 | 4176835 | ID=MS.gene22324.t1;Parent=MS.gene22324 |
chr5.4 | exon | 4177612 | 4179667 | 4177612 | ID=MS.gene22324.t1.exon1;Parent=MS.gene22324.t1 |
chr5.4 | CDS | 4177612 | 4179667 | 4177612 | ID=cds.MS.gene22324.t1;Parent=MS.gene22324.t1 |
chr5.4 | exon | 4176835 | 4177460 | 4176835 | ID=MS.gene22324.t1.exon2;Parent=MS.gene22324.t1 |
chr5.4 | CDS | 4176835 | 4177460 | 4176835 | ID=cds.MS.gene22324.t1;Parent=MS.gene22324.t1 |
Gene Sequence |
Protein sequence |