Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22760.t1 | XP_024627352.1 | 90.6 | 266 | 7 | 7 | 3 | 261 | 1 | 255 | 6.90E-98 | 367.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22760.t1 | Q9M1S3 | 39.9 | 248 | 136 | 5 | 6 | 250 | 2 | 239 | 1.9e-35 | 151.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22760.t1 | A0A072U4M6 | 90.2 | 266 | 9 | 7 | 3 | 261 | 1 | 256 | 3.2e-97 | 364.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049488 | MS.gene22760 | -0.801749 | 7.77E-49 | -1.69E-46 |
MS.gene050710 | MS.gene22760 | 0.882265 | 1.20E-70 | -1.69E-46 |
MS.gene051552 | MS.gene22760 | 0.81311 | 3.02E-51 | -1.69E-46 |
MS.gene051838 | MS.gene22760 | -0.800359 | 1.50E-48 | -1.69E-46 |
MS.gene052223 | MS.gene22760 | 0.80083 | 1.20E-48 | -1.69E-46 |
MS.gene053108 | MS.gene22760 | 0.807442 | 5.04E-50 | -1.69E-46 |
MS.gene055159 | MS.gene22760 | 0.821962 | 3.05E-53 | -1.69E-46 |
MS.gene05652 | MS.gene22760 | 0.800448 | 1.43E-48 | -1.69E-46 |
MS.gene056688 | MS.gene22760 | 0.821334 | 4.27E-53 | -1.69E-46 |
MS.gene057356 | MS.gene22760 | 0.808578 | 2.89E-50 | -1.69E-46 |
MS.gene058418 | MS.gene22760 | 0.814138 | 1.79E-51 | -1.69E-46 |
MS.gene05926 | MS.gene22760 | 0.838479 | 2.81E-57 | -1.69E-46 |
MS.gene05960 | MS.gene22760 | 0.800412 | 1.46E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22760.t1 | MTR_7g117495 | 86.842 | 266 | 15 | 7 | 3 | 261 | 1 | 253 | 3.40e-148 | 414 |
MS.gene22760.t1 | MTR_7g117495 | 86.466 | 266 | 19 | 7 | 3 | 261 | 1 | 256 | 8.92e-142 | 398 |
MS.gene22760.t1 | MTR_8g024520 | 62.037 | 108 | 41 | 0 | 12 | 119 | 13 | 120 | 4.97e-44 | 150 |
MS.gene22760.t1 | MTR_8g024520 | 62.037 | 108 | 41 | 0 | 12 | 119 | 13 | 120 | 5.24e-44 | 150 |
MS.gene22760.t1 | MTR_5g064120 | 74.419 | 86 | 22 | 0 | 16 | 101 | 8 | 93 | 2.18e-43 | 149 |
MS.gene22760.t1 | MTR_3g116130 | 69.072 | 97 | 28 | 1 | 16 | 112 | 21 | 115 | 6.58e-43 | 147 |
MS.gene22760.t1 | MTR_3g116130 | 69.072 | 97 | 28 | 1 | 16 | 112 | 21 | 115 | 1.33e-41 | 146 |
MS.gene22760.t1 | MTR_4g035310 | 66.667 | 93 | 31 | 0 | 17 | 109 | 9 | 101 | 2.40e-41 | 143 |
MS.gene22760.t1 | MTR_4g035310 | 66.667 | 93 | 31 | 0 | 17 | 109 | 9 | 101 | 2.62e-41 | 143 |
MS.gene22760.t1 | MTR_3g092490 | 57.143 | 105 | 39 | 1 | 12 | 110 | 14 | 118 | 1.21e-37 | 130 |
MS.gene22760.t1 | MTR_3g092490 | 57.143 | 105 | 39 | 1 | 12 | 110 | 14 | 118 | 9.14e-37 | 130 |
MS.gene22760.t1 | MTR_3g092490 | 57.143 | 105 | 39 | 1 | 12 | 110 | 14 | 118 | 9.60e-37 | 130 |
MS.gene22760.t1 | MTR_4g088010 | 48.810 | 84 | 43 | 0 | 20 | 103 | 72 | 155 | 2.21e-19 | 86.7 |
MS.gene22760.t1 | MTR_4g088010 | 32.673 | 101 | 65 | 2 | 19 | 119 | 158 | 255 | 5.27e-12 | 65.5 |
MS.gene22760.t1 | MTR_7g088140 | 44.048 | 84 | 47 | 0 | 19 | 102 | 122 | 205 | 7.07e-18 | 83.2 |
MS.gene22760.t1 | MTR_2g026180 | 38.532 | 109 | 53 | 3 | 25 | 124 | 5 | 108 | 7.42e-18 | 82.8 |
MS.gene22760.t1 | MTR_7g088140 | 44.048 | 84 | 47 | 0 | 19 | 102 | 122 | 205 | 1.07e-17 | 82.4 |
MS.gene22760.t1 | MTR_8g463890 | 44.578 | 83 | 46 | 0 | 20 | 102 | 69 | 151 | 1.29e-17 | 82.0 |
MS.gene22760.t1 | MTR_8g463890 | 35.354 | 99 | 64 | 0 | 1 | 99 | 142 | 240 | 4.64e-13 | 68.9 |
MS.gene22760.t1 | MTR_4g109540 | 43.529 | 85 | 44 | 2 | 24 | 107 | 42 | 123 | 1.16e-16 | 77.8 |
MS.gene22760.t1 | MTR_3g055990 | 42.466 | 73 | 41 | 1 | 20 | 92 | 2 | 73 | 1.66e-16 | 79.0 |
MS.gene22760.t1 | MTR_3g055990 | 42.466 | 73 | 41 | 1 | 20 | 92 | 2 | 73 | 1.73e-16 | 79.0 |
MS.gene22760.t1 | MTR_7g105260 | 36.800 | 125 | 74 | 3 | 10 | 131 | 16 | 138 | 2.40e-16 | 73.9 |
MS.gene22760.t1 | MTR_7g013730 | 43.210 | 81 | 45 | 1 | 25 | 104 | 41 | 121 | 3.00e-16 | 76.3 |
MS.gene22760.t1 | MTR_3g084040 | 43.478 | 69 | 39 | 0 | 24 | 92 | 36 | 104 | 5.02e-16 | 73.6 |
MS.gene22760.t1 | MTR_3g025880 | 42.857 | 91 | 48 | 2 | 18 | 107 | 38 | 125 | 1.13e-15 | 76.6 |
MS.gene22760.t1 | MTR_7g013740 | 43.529 | 85 | 44 | 2 | 25 | 108 | 41 | 122 | 2.36e-15 | 71.6 |
MS.gene22760.t1 | MTR_4g070190 | 49.153 | 59 | 30 | 0 | 25 | 83 | 9 | 67 | 2.82e-15 | 72.0 |
MS.gene22760.t1 | MTR_5g088220 | 39.744 | 78 | 47 | 0 | 25 | 102 | 166 | 243 | 3.30e-15 | 75.1 |
MS.gene22760.t1 | MTR_3g084040 | 46.552 | 58 | 31 | 0 | 24 | 81 | 36 | 93 | 5.01e-15 | 69.7 |
MS.gene22760.t1 | MTR_5g097580 | 46.667 | 60 | 32 | 0 | 25 | 84 | 7 | 66 | 1.09e-14 | 73.6 |
MS.gene22760.t1 | MTR_5g097580 | 46.667 | 60 | 32 | 0 | 25 | 84 | 7 | 66 | 1.14e-14 | 73.6 |
MS.gene22760.t1 | MTR_4g070140 | 43.421 | 76 | 42 | 1 | 25 | 99 | 9 | 84 | 1.22e-14 | 70.9 |
MS.gene22760.t1 | MTR_1g073690 | 37.500 | 80 | 49 | 1 | 20 | 99 | 2 | 80 | 1.23e-14 | 73.6 |
MS.gene22760.t1 | MTR_4g070080 | 47.458 | 59 | 31 | 0 | 25 | 83 | 7 | 65 | 1.71e-14 | 68.9 |
MS.gene22760.t1 | MTR_3g080130 | 36.957 | 92 | 54 | 2 | 24 | 114 | 36 | 124 | 1.91e-14 | 68.9 |
MS.gene22760.t1 | MTR_3g103420 | 42.500 | 80 | 45 | 1 | 20 | 99 | 6 | 84 | 3.06e-14 | 72.0 |
MS.gene22760.t1 | MTR_4g109540 | 39.785 | 93 | 44 | 3 | 24 | 107 | 42 | 131 | 3.57e-14 | 70.9 |
MS.gene22760.t1 | MTR_4g070080 | 47.458 | 59 | 31 | 0 | 25 | 83 | 7 | 65 | 4.51e-14 | 68.6 |
MS.gene22760.t1 | MTR_4g063560 | 42.500 | 80 | 45 | 1 | 24 | 102 | 33 | 112 | 2.56e-13 | 65.1 |
MS.gene22760.t1 | MTR_1g092860 | 37.755 | 98 | 60 | 1 | 3 | 99 | 171 | 268 | 4.38e-13 | 67.8 |
MS.gene22760.t1 | MTR_3g014000 | 34.862 | 109 | 56 | 3 | 3 | 100 | 10 | 114 | 2.38e-12 | 63.2 |
MS.gene22760.t1 | MTR_4g081520 | 45.000 | 60 | 33 | 0 | 24 | 83 | 51 | 110 | 4.18e-12 | 62.8 |
MS.gene22760.t1 | MTR_3g029580 | 44.828 | 58 | 32 | 0 | 24 | 81 | 32 | 89 | 4.63e-12 | 62.4 |
MS.gene22760.t1 | MTR_3g082650 | 40.625 | 64 | 38 | 0 | 25 | 88 | 19 | 82 | 9.21e-12 | 64.7 |
MS.gene22760.t1 | MTR_3g029580 | 44.828 | 58 | 32 | 0 | 24 | 81 | 32 | 89 | 1.05e-11 | 61.2 |
MS.gene22760.t1 | MTR_6g004810 | 42.188 | 64 | 37 | 0 | 25 | 88 | 46 | 109 | 4.05e-11 | 62.8 |
MS.gene22760.t1 | MTR_7g118120 | 47.541 | 61 | 32 | 0 | 24 | 84 | 104 | 164 | 7.52e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22760.t1 | AT3G54770 | 47.036 | 253 | 111 | 9 | 6 | 250 | 2 | 239 | 1.58e-55 | 179 |
MS.gene22760.t1 | AT3G54770 | 47.036 | 253 | 111 | 9 | 6 | 250 | 2 | 239 | 3.49e-55 | 178 |
MS.gene22760.t1 | AT1G20880 | 75.824 | 91 | 22 | 0 | 16 | 106 | 16 | 106 | 1.24e-45 | 154 |
MS.gene22760.t1 | AT1G20880 | 75.824 | 91 | 22 | 0 | 16 | 106 | 16 | 106 | 1.24e-45 | 154 |
MS.gene22760.t1 | AT1G20880 | 75.824 | 91 | 22 | 0 | 16 | 106 | 16 | 106 | 1.24e-45 | 154 |
MS.gene22760.t1 | AT1G76460 | 75.824 | 91 | 22 | 0 | 16 | 106 | 16 | 106 | 1.40e-45 | 154 |
MS.gene22760.t1 | AT1G22910 | 67.391 | 92 | 30 | 0 | 18 | 109 | 7 | 98 | 1.36e-41 | 143 |
MS.gene22760.t1 | AT1G22910 | 67.391 | 92 | 30 | 0 | 18 | 109 | 7 | 98 | 1.66e-41 | 143 |
MS.gene22760.t1 | AT2G46780 | 61.468 | 109 | 31 | 2 | 10 | 118 | 13 | 110 | 3.51e-41 | 144 |
MS.gene22760.t1 | AT2G46780 | 61.468 | 109 | 31 | 2 | 10 | 118 | 13 | 110 | 3.51e-41 | 144 |
MS.gene22760.t1 | AT1G22910 | 67.391 | 92 | 30 | 0 | 18 | 109 | 7 | 98 | 1.61e-40 | 143 |
MS.gene22760.t1 | AT1G33470 | 67.742 | 93 | 29 | 1 | 20 | 111 | 3 | 95 | 8.85e-40 | 138 |
MS.gene22760.t1 | AT1G33470 | 67.742 | 93 | 29 | 1 | 20 | 111 | 3 | 95 | 9.08e-40 | 138 |
MS.gene22760.t1 | AT1G33470 | 67.742 | 93 | 29 | 1 | 20 | 111 | 3 | 95 | 9.62e-40 | 138 |
MS.gene22760.t1 | AT3G54770 | 45.161 | 217 | 92 | 9 | 40 | 250 | 1 | 196 | 1.03e-39 | 137 |
MS.gene22760.t1 | AT1G22330 | 65.934 | 91 | 31 | 0 | 16 | 106 | 9 | 99 | 1.61e-39 | 139 |
MS.gene22760.t1 | AT1G78260 | 66.667 | 84 | 28 | 0 | 18 | 101 | 11 | 94 | 1.26e-37 | 134 |
MS.gene22760.t1 | AT1G78260 | 66.667 | 84 | 28 | 0 | 18 | 101 | 11 | 94 | 1.75e-37 | 133 |
MS.gene22760.t1 | AT5G11412 | 54.118 | 85 | 39 | 0 | 20 | 104 | 48 | 132 | 1.48e-29 | 110 |
MS.gene22760.t1 | AT5G53680 | 48.000 | 100 | 49 | 1 | 20 | 119 | 9 | 105 | 5.49e-27 | 103 |
MS.gene22760.t1 | AT3G06970 | 46.154 | 91 | 49 | 0 | 20 | 110 | 8 | 98 | 7.49e-24 | 98.2 |
MS.gene22760.t1 | AT5G53720 | 49.383 | 81 | 41 | 0 | 24 | 104 | 9 | 89 | 1.59e-23 | 92.0 |
MS.gene22760.t1 | AT2G22090 | 49.398 | 83 | 42 | 0 | 20 | 102 | 100 | 182 | 1.43e-19 | 87.0 |
MS.gene22760.t1 | AT2G22090 | 49.398 | 83 | 42 | 0 | 20 | 102 | 100 | 182 | 1.55e-19 | 87.0 |
MS.gene22760.t1 | AT3G15010 | 37.500 | 96 | 60 | 0 | 9 | 104 | 152 | 247 | 1.83e-18 | 84.3 |
MS.gene22760.t1 | AT3G15010 | 46.988 | 83 | 44 | 0 | 20 | 102 | 71 | 153 | 1.01e-17 | 82.4 |
MS.gene22760.t1 | AT3G15010 | 37.500 | 96 | 60 | 0 | 9 | 104 | 152 | 247 | 1.83e-18 | 84.3 |
MS.gene22760.t1 | AT3G15010 | 46.988 | 83 | 44 | 0 | 20 | 102 | 71 | 153 | 1.01e-17 | 82.4 |
MS.gene22760.t1 | AT3G23830 | 41.379 | 87 | 50 | 1 | 24 | 109 | 35 | 121 | 3.35e-18 | 79.0 |
MS.gene22760.t1 | AT3G23830 | 41.379 | 87 | 50 | 1 | 24 | 109 | 35 | 121 | 3.35e-18 | 79.0 |
MS.gene22760.t1 | AT4G39260 | 40.000 | 85 | 47 | 1 | 25 | 109 | 7 | 87 | 4.85e-18 | 77.4 |
MS.gene22760.t1 | AT4G26650 | 44.444 | 72 | 39 | 1 | 21 | 92 | 9 | 79 | 2.06e-17 | 81.6 |
MS.gene22760.t1 | AT4G26650 | 44.444 | 72 | 39 | 1 | 21 | 92 | 12 | 82 | 2.16e-17 | 81.6 |
MS.gene22760.t1 | AT4G13850 | 40.000 | 95 | 46 | 2 | 24 | 118 | 35 | 118 | 2.93e-17 | 76.6 |
MS.gene22760.t1 | AT4G13850 | 40.000 | 95 | 46 | 2 | 24 | 118 | 35 | 118 | 3.62e-17 | 76.6 |
MS.gene22760.t1 | AT4G13850 | 40.000 | 95 | 46 | 2 | 24 | 118 | 35 | 118 | 4.07e-17 | 76.6 |
MS.gene22760.t1 | AT2G19380 | 30.055 | 183 | 112 | 4 | 20 | 189 | 404 | 583 | 5.41e-17 | 80.5 |
MS.gene22760.t1 | AT2G41060 | 37.500 | 112 | 65 | 2 | 20 | 128 | 124 | 233 | 5.57e-17 | 80.5 |
MS.gene22760.t1 | AT2G41060 | 37.500 | 112 | 65 | 2 | 20 | 128 | 124 | 233 | 5.57e-17 | 80.5 |
MS.gene22760.t1 | AT2G41060 | 37.500 | 112 | 65 | 2 | 20 | 128 | 124 | 233 | 5.57e-17 | 80.5 |
MS.gene22760.t1 | AT4G39260 | 50.000 | 60 | 30 | 0 | 25 | 84 | 7 | 66 | 7.43e-17 | 74.3 |
MS.gene22760.t1 | AT4G39260 | 41.558 | 77 | 41 | 1 | 25 | 101 | 7 | 79 | 7.97e-17 | 75.1 |
MS.gene22760.t1 | AT4G14300 | 44.928 | 69 | 38 | 0 | 20 | 88 | 2 | 70 | 1.19e-16 | 79.3 |
MS.gene22760.t1 | AT4G14300 | 44.928 | 69 | 38 | 0 | 20 | 88 | 2 | 70 | 1.19e-16 | 79.3 |
MS.gene22760.t1 | AT4G13850 | 39.785 | 93 | 45 | 2 | 24 | 116 | 35 | 116 | 1.75e-16 | 74.3 |
MS.gene22760.t1 | AT5G55550 | 32.990 | 97 | 65 | 0 | 20 | 116 | 2 | 98 | 1.90e-16 | 79.0 |
MS.gene22760.t1 | AT5G55550 | 32.990 | 97 | 65 | 0 | 20 | 116 | 2 | 98 | 1.92e-16 | 79.0 |
MS.gene22760.t1 | AT4G39260 | 41.558 | 77 | 41 | 1 | 25 | 101 | 7 | 79 | 2.17e-16 | 75.1 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.25e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.25e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.25e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.25e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.25e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.55e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.55e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.55e-16 | 78.6 |
MS.gene22760.t1 | AT5G55550 | 41.096 | 73 | 42 | 1 | 20 | 92 | 2 | 73 | 2.55e-16 | 78.6 |
MS.gene22760.t1 | AT2G21660 | 54.237 | 59 | 27 | 0 | 25 | 83 | 9 | 67 | 3.04e-16 | 74.3 |
MS.gene22760.t1 | AT5G47620 | 45.312 | 64 | 35 | 0 | 25 | 88 | 7 | 70 | 3.84e-16 | 77.8 |
MS.gene22760.t1 | AT5G47620 | 45.312 | 64 | 35 | 0 | 25 | 88 | 7 | 70 | 3.84e-16 | 77.8 |
MS.gene22760.t1 | AT5G47620 | 45.312 | 64 | 35 | 0 | 25 | 88 | 7 | 70 | 3.84e-16 | 77.8 |
MS.gene22760.t1 | AT5G47620 | 45.312 | 64 | 35 | 0 | 25 | 88 | 7 | 70 | 4.11e-16 | 77.8 |
MS.gene22760.t1 | AT2G21660 | 54.237 | 59 | 27 | 0 | 25 | 83 | 9 | 67 | 4.39e-16 | 74.3 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT3G56860 | 42.308 | 78 | 45 | 0 | 25 | 102 | 141 | 218 | 4.93e-16 | 77.8 |
MS.gene22760.t1 | AT1G74230 | 44.156 | 77 | 43 | 0 | 24 | 100 | 34 | 110 | 1.72e-15 | 74.7 |
MS.gene22760.t1 | AT3G07810 | 35.780 | 109 | 56 | 3 | 25 | 124 | 7 | 110 | 1.80e-15 | 75.9 |
MS.gene22760.t1 | AT3G07810 | 35.780 | 109 | 56 | 3 | 25 | 124 | 7 | 110 | 2.26e-15 | 75.9 |
MS.gene22760.t1 | AT3G26420 | 47.761 | 67 | 31 | 1 | 25 | 91 | 8 | 70 | 2.32e-15 | 73.9 |
MS.gene22760.t1 | AT1G17640 | 45.455 | 66 | 36 | 0 | 25 | 90 | 67 | 132 | 2.41e-15 | 75.1 |
MS.gene22760.t1 | AT1G17640 | 45.455 | 66 | 36 | 0 | 25 | 90 | 67 | 132 | 2.41e-15 | 75.1 |
MS.gene22760.t1 | AT1G17640 | 45.455 | 66 | 36 | 0 | 25 | 90 | 67 | 132 | 2.41e-15 | 75.1 |
MS.gene22760.t1 | AT5G61030 | 44.928 | 69 | 34 | 1 | 24 | 92 | 40 | 104 | 3.22e-15 | 74.3 |
MS.gene22760.t1 | AT5G61030 | 44.928 | 69 | 34 | 1 | 24 | 92 | 40 | 104 | 3.22e-15 | 74.3 |
MS.gene22760.t1 | AT5G06210 | 45.833 | 72 | 35 | 1 | 24 | 95 | 34 | 101 | 1.87e-14 | 69.3 |
MS.gene22760.t1 | AT2G22100 | 40.260 | 77 | 46 | 0 | 20 | 96 | 159 | 235 | 2.80e-14 | 72.0 |
MS.gene22760.t1 | AT4G13860 | 39.024 | 82 | 45 | 2 | 24 | 102 | 3 | 82 | 1.55e-13 | 65.1 |
MS.gene22760.t1 | AT3G13224 | 39.362 | 94 | 52 | 3 | 4 | 96 | 1 | 90 | 3.45e-13 | 68.9 |
MS.gene22760.t1 | AT2G33410 | 33.803 | 71 | 47 | 0 | 20 | 90 | 2 | 72 | 1.15e-12 | 67.4 |
MS.gene22760.t1 | AT5G59865 | 50.980 | 51 | 25 | 0 | 22 | 72 | 24 | 74 | 1.47e-12 | 63.2 |
MS.gene22760.t1 | AT3G13224 | 39.362 | 94 | 52 | 3 | 4 | 96 | 1 | 90 | 1.74e-12 | 65.5 |
MS.gene22760.t1 | AT1G58470 | 41.429 | 70 | 41 | 0 | 20 | 89 | 2 | 71 | 2.71e-12 | 66.2 |
MS.gene22760.t1 | AT1G58470 | 41.429 | 70 | 41 | 0 | 20 | 89 | 2 | 71 | 2.71e-12 | 66.2 |
MS.gene22760.t1 | AT5G40490 | 44.615 | 65 | 36 | 0 | 25 | 89 | 43 | 107 | 4.44e-12 | 65.9 |
MS.gene22760.t1 | AT3G13224 | 40.845 | 71 | 41 | 1 | 25 | 95 | 11 | 80 | 7.68e-12 | 65.1 |
MS.gene22760.t1 | AT3G20930 | 40.909 | 88 | 50 | 2 | 25 | 110 | 283 | 370 | 1.10e-11 | 64.7 |
MS.gene22760.t1 | AT1G18630 | 41.791 | 67 | 37 | 1 | 19 | 83 | 29 | 95 | 1.72e-11 | 61.2 |
MS.gene22760.t1 | AT3G08000 | 35.484 | 93 | 52 | 3 | 25 | 114 | 42 | 129 | 4.12e-11 | 60.1 |
MS.gene22760.t1 | AT4G36960 | 40.678 | 59 | 35 | 0 | 25 | 83 | 4 | 62 | 4.48e-11 | 62.8 |
MS.gene22760.t1 | AT4G36960 | 40.678 | 59 | 35 | 0 | 25 | 83 | 4 | 62 | 4.48e-11 | 62.8 |
Find 115 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGTGATGATGATGGAATAT+TGG | 0.316199 | 7.3:+236902 | None:intergenic |
CGTGATGATGATGGAATATT+GGG | 0.323951 | 7.3:+236903 | None:intergenic |
ATGGATCACCATCACAGTTT+GGG | 0.341928 | 7.3:-237303 | MS.gene22760:CDS |
AGAAGAAGGAGGAGAAGTTA+TGG | 0.355356 | 7.3:+237009 | None:intergenic |
AATGGATCACCATCACAGTT+TGG | 0.360186 | 7.3:-237304 | MS.gene22760:CDS |
TGTTCTCTTAATGTGTCTTT+CGG | 0.360765 | 7.3:+237232 | None:intergenic |
CCCGCCGAGGCAGGCTATTG+TGG | 0.363625 | 7.3:-236497 | MS.gene22760:CDS |
TGGTTGCTGCGGTGGATCTT+TGG | 0.373820 | 7.3:+236974 | None:intergenic |
ATAATTTCTGATAAGGTTAC+CGG | 0.382398 | 7.3:-237175 | MS.gene22760:CDS |
TGTTTGTTGGAGGTCTTGCC+TGG | 0.388391 | 7.3:-237261 | MS.gene22760:CDS |
AGCTGTCATAATTTCTGATA+AGG | 0.401698 | 7.3:-237182 | MS.gene22760:CDS |
TGTTACAAATCCATAGCCTT+TGG | 0.401760 | 7.3:+237147 | None:intergenic |
AAGCATTCACCCGTGCCAAC+TGG | 0.407073 | 7.3:+236212 | None:intergenic |
GAAGAAGGAGGAGAAGTTAT+GGG | 0.408219 | 7.3:+237010 | None:intergenic |
CTGAGCTATGGAATGGGTGG+GGG | 0.408792 | 7.3:-236532 | MS.gene22760:CDS |
CATCACGCCCTTCCTTTCTA+CGG | 0.413597 | 7.3:-236887 | MS.gene22760:CDS |
CCTGCTGCTGGTTGCTGCGG+TGG | 0.413826 | 7.3:+236966 | None:intergenic |
TGAGCTATGGAATGGGTGGG+GGG | 0.424131 | 7.3:-236531 | MS.gene22760:CDS |
CTCTTGGTGCTCGCCGTCCA+AGG | 0.426692 | 7.3:-237039 | MS.gene22760:CDS |
GAGCTATGGAATGGGTGGGG+GGG | 0.429343 | 7.3:-236530 | MS.gene22760:CDS |
AATAATGATAATGATGAGTT+GGG | 0.437625 | 7.3:+236380 | None:intergenic |
CAGAAATTATGACAGCTTCA+AGG | 0.453018 | 7.3:+237188 | None:intergenic |
CCGCCGAGGCAGGCTATTGT+GGG | 0.455950 | 7.3:-236496 | MS.gene22760:CDS |
ACGCTGACAAAAGTGTTTGT+TGG | 0.457047 | 7.3:-237274 | MS.gene22760:CDS |
AAGGAAGGGCGTGATGATGA+TGG | 0.457080 | 7.3:+236894 | None:intergenic |
TCCATAGCCTTTGGATCTGC+CGG | 0.474152 | 7.3:+237156 | None:intergenic |
GAATAATGATAATGATGAGT+TGG | 0.476228 | 7.3:+236379 | None:intergenic |
TGGATCTTTGGAGGAGGAGG+AGG | 0.478510 | 7.3:+236986 | None:intergenic |
GATCTGTAGACAGGAGGAGC+AGG | 0.479037 | 7.3:+236448 | None:intergenic |
GAATATTGGGGAAGGAGGTG+TGG | 0.480515 | 7.3:+236916 | None:intergenic |
GCACGGGTGAATGCTTCAAA+AGG | 0.482053 | 7.3:-236205 | MS.gene22760:CDS |
ACTGAGCTATGGAATGGGTG+GGG | 0.482453 | 7.3:-236533 | MS.gene22760:CDS |
ACTCCTAGTCCTACTACAAC+AGG | 0.483068 | 7.3:-236346 | MS.gene22760:intron |
CGGTGGATCTTTGGAGGAGG+AGG | 0.483953 | 7.3:+236983 | None:intergenic |
GGGTGGAAGATTTGAGGTGG+AGG | 0.485695 | 7.3:+236400 | None:intergenic |
AGATGCAGAGGCTGCAAAGA+AGG | 0.488455 | 7.3:-237119 | MS.gene22760:CDS |
TGTGTCTTTCGGAGTTTCCC+AGG | 0.489644 | 7.3:+237243 | None:intergenic |
CCACAATAGCCTGCCTCGGC+GGG | 0.493685 | 7.3:+236497 | None:intergenic |
GCAGGGTGGTGGTACATGAT+TGG | 0.499499 | 7.3:+236466 | None:intergenic |
ATCACGCCCTTCCTTTCTAC+GGG | 0.499631 | 7.3:-236886 | MS.gene22760:intron |
CCACCGCAGCAACCAGCAGC+AGG | 0.500038 | 7.3:-236966 | MS.gene22760:CDS |
ATCAACCGAGGCTATGGCCA+TGG | 0.501706 | 7.3:-236428 | MS.gene22760:CDS |
ATATATTAACCTGTTGTAGT+AGG | 0.505308 | 7.3:+236337 | None:intergenic |
CTACAGATCAACCGAGGCTA+TGG | 0.506662 | 7.3:-236434 | MS.gene22760:CDS |
TTGCTGCGGTGGATCTTTGG+AGG | 0.509090 | 7.3:+236977 | None:intergenic |
TAAAATATATACCCGTAGAA+AGG | 0.515467 | 7.3:+236875 | None:intergenic |
CATATGATCTGTTGCAATGT+AGG | 0.515946 | 7.3:+236684 | None:intergenic |
GGAGGAGGAGGAGAAGAAGG+AGG | 0.516038 | 7.3:+236998 | None:intergenic |
CTACGTGTACCCGCCGAGGC+AGG | 0.516397 | 7.3:-236506 | MS.gene22760:CDS |
GCCTCGGTTGATCTGTAGAC+AGG | 0.521868 | 7.3:+236439 | None:intergenic |
ATATATACCCGTAGAAAGGA+AGG | 0.523229 | 7.3:+236879 | None:intergenic |
AACTGCAATATCGCTTCTCT+TGG | 0.523354 | 7.3:-237055 | MS.gene22760:CDS |
GCAGGTTCAATGGTATTATC+CGG | 0.525480 | 7.3:-236948 | MS.gene22760:CDS |
AACTGAGCTATGGAATGGGT+GGG | 0.529212 | 7.3:-236534 | MS.gene22760:CDS |
TAACCTGTTGTAGTAGGACT+AGG | 0.534126 | 7.3:+236343 | None:intergenic |
TAGGACTAGGAGTGATGGAT+GGG | 0.535767 | 7.3:+236356 | None:intergenic |
TTACAACTGCAATTACAATC+AGG | 0.535938 | 7.3:-236659 | MS.gene22760:intron |
GGAGGTGTGGGTGTTCCCAC+CGG | 0.538024 | 7.3:+236929 | None:intergenic |
ACCGGCAGATCCAAAGGCTA+TGG | 0.539327 | 7.3:-237157 | MS.gene22760:CDS |
AGACAGGAGGAGCAGGGTGG+TGG | 0.540978 | 7.3:+236455 | None:intergenic |
CTGACAAAAGTGTTTGTTGG+AGG | 0.542823 | 7.3:-237271 | MS.gene22760:CDS |
GCAACCAGCAGCAGGTTCAA+TGG | 0.542889 | 7.3:-236958 | MS.gene22760:CDS |
GACACCCATGGCCATAGCCT+CGG | 0.543694 | 7.3:+236423 | None:intergenic |
AATATTGGGGAAGGAGGTGT+GGG | 0.546556 | 7.3:+236917 | None:intergenic |
CTGCGGTGGATCTTTGGAGG+AGG | 0.548182 | 7.3:+236980 | None:intergenic |
GATATTGATCATGACGATGA+TGG | 0.548742 | 7.3:-237347 | None:intergenic |
GAACCAACTGTGATCATCAA+TGG | 0.551058 | 7.3:-237088 | MS.gene22760:CDS |
ATTGATAGGTCCAGTTGGCA+CGG | 0.551120 | 7.3:-236222 | MS.gene22760:intron |
AATACCATTGAACCTGCTGC+TGG | 0.553977 | 7.3:+236954 | None:intergenic |
AAGCGATATTGCAGTTGGCT+CGG | 0.556799 | 7.3:+237062 | None:intergenic |
TTGATAGGTCCAGTTGGCAC+GGG | 0.560846 | 7.3:-236221 | MS.gene22760:intron |
GAAGTTATGGGAGAAGACCT+TGG | 0.565897 | 7.3:+237022 | None:intergenic |
CGAATGCAGAAACTGAGCTA+TGG | 0.568591 | 7.3:-236544 | MS.gene22760:intron |
CCCACAATAGCCTGCCTCGG+CGG | 0.568725 | 7.3:+236496 | None:intergenic |
AAACTGAGCTATGGAATGGG+TGG | 0.571141 | 7.3:-236535 | MS.gene22760:CDS |
GTAGGACTAGGAGTGATGGA+TGG | 0.572210 | 7.3:+236355 | None:intergenic |
GAACCTGCTGCTGGTTGCTG+CGG | 0.576807 | 7.3:+236963 | None:intergenic |
CGACCATTGATGATCACAGT+TGG | 0.578434 | 7.3:+237085 | None:intergenic |
AAGGTTACCGGCAGATCCAA+AGG | 0.581260 | 7.3:-237163 | MS.gene22760:CDS |
TCAACCGAGGCTATGGCCAT+GGG | 0.585523 | 7.3:-236427 | MS.gene22760:CDS |
GGTGGAAGATTTGAGGTGGA+GGG | 0.586269 | 7.3:+236401 | None:intergenic |
TGAGTTGGGTGGAAGATTTG+AGG | 0.586506 | 7.3:+236394 | None:intergenic |
TGATGGAATATTGGGGAAGG+AGG | 0.587373 | 7.3:+236911 | None:intergenic |
TGAATGCTTCAAAAGGGTAG+TGG | 0.590972 | 7.3:-236198 | MS.gene22760:CDS |
GGCTGCAAAGAAGGCTTGCG+AGG | 0.592252 | 7.3:-237110 | MS.gene22760:CDS |
TGAATATTGATAGGTCCAGT+TGG | 0.592422 | 7.3:-236227 | MS.gene22760:intron |
GCAGAAACTGAGCTATGGAA+TGG | 0.594468 | 7.3:-236539 | MS.gene22760:intron |
AAGAGAAGCGATATTGCAGT+TGG | 0.596190 | 7.3:+237057 | None:intergenic |
TGTAGTAGGACTAGGAGTGA+TGG | 0.600167 | 7.3:+236351 | None:intergenic |
GTTGGGTGGAAGATTTGAGG+TGG | 0.600463 | 7.3:+236397 | None:intergenic |
GCACCCACAATAGCCTGCCT+CGG | 0.602284 | 7.3:+236493 | None:intergenic |
ATGATCTGTTGCAATGTAGG+TGG | 0.608013 | 7.3:+236687 | None:intergenic |
GGTTCAATGGTATTATCCGG+TGG | 0.611241 | 7.3:-236945 | MS.gene22760:CDS |
CAGAAACTGAGCTATGGAAT+GGG | 0.612059 | 7.3:-236538 | MS.gene22760:CDS |
TGTAACATTCAAAGATGCAG+AGG | 0.612207 | 7.3:-237131 | MS.gene22760:CDS |
CACGGGTGAATGCTTCAAAA+GGG | 0.613875 | 7.3:-236204 | MS.gene22760:CDS |
ATATTGATCATGACGATGAT+GGG | 0.616366 | 7.3:-237346 | None:intergenic |
GGGGCTACGTGTACCCGCCG+AGG | 0.616991 | 7.3:-236510 | MS.gene22760:CDS |
TTGAGGTGGAGGGACACCCA+TGG | 0.627473 | 7.3:+236411 | None:intergenic |
TATATACCCGTAGAAAGGAA+GGG | 0.631562 | 7.3:+236880 | None:intergenic |
ATCTGTAGACAGGAGGAGCA+GGG | 0.632459 | 7.3:+236449 | None:intergenic |
GTTTGTTGGAGGTCTTGCCT+GGG | 0.633552 | 7.3:-237260 | MS.gene22760:CDS |
GTTCAATGGTATTATCCGGT+GGG | 0.634469 | 7.3:-236944 | MS.gene22760:CDS |
TGATCTGTTGCAATGTAGGT+GGG | 0.635848 | 7.3:+236688 | None:intergenic |
AATGATAATGATGAGTTGGG+TGG | 0.637114 | 7.3:+236383 | None:intergenic |
TGATGATGGAATATTGGGGA+AGG | 0.639851 | 7.3:+236908 | None:intergenic |
TTATGGGAGAAGACCTTGGA+CGG | 0.649901 | 7.3:+237026 | None:intergenic |
GTTGTGTCCCCAAACTGTGA+TGG | 0.652121 | 7.3:+237295 | None:intergenic |
AGCAGCAACAGCAACAACAA+TGG | 0.659160 | 7.3:-237322 | MS.gene22760:CDS |
AGGACTAGGAGTGATGGATG+GGG | 0.665517 | 7.3:+236357 | None:intergenic |
TGGATCACCATCACAGTTTG+GGG | 0.666646 | 7.3:-237302 | MS.gene22760:CDS |
TCGGTTGATCTGTAGACAGG+AGG | 0.670555 | 7.3:+236442 | None:intergenic |
TCCTGTCTACAGATCAACCG+AGG | 0.712533 | 7.3:-236440 | MS.gene22760:CDS |
GTGATGATGATGGAATATTG+GGG | 0.716207 | 7.3:+236904 | None:intergenic |
TGTAGACAGGAGGAGCAGGG+TGG | 0.747299 | 7.3:+236452 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTCTTGTTATTGAATT+AGG | + | chr7.3:236937-236956 | None:intergenic | 15.0% |
!!! | TTTTAATTTGAAAAAATGGT+TGG | - | chr7.3:236962-236981 | MS.gene22760:CDS | 15.0% |
!!! | AATAATGATAATGATGAGTT+GGG | + | chr7.3:237153-237172 | None:intergenic | 20.0% |
!!! | CATTTAAATCACATTTGTTA+AGG | + | chr7.3:236792-236811 | None:intergenic | 20.0% |
! | ATAATTTCTGATAAGGTTAC+CGG | - | chr7.3:236355-236374 | MS.gene22760:CDS | 25.0% |
! | ATATATTAACCTGTTGTAGT+AGG | + | chr7.3:237196-237215 | None:intergenic | 25.0% |
! | CAATTACAATCAGGTATATA+TGG | - | chr7.3:236880-236899 | MS.gene22760:intron | 25.0% |
! | TAAAATATATACCCGTAGAA+AGG | + | chr7.3:236658-236677 | None:intergenic | 25.0% |
!! | AGAGAACACTTTGAAAAATA+CGG | - | chr7.3:236313-236332 | MS.gene22760:intron | 25.0% |
!! | GAATAATGATAATGATGAGT+TGG | + | chr7.3:237154-237173 | None:intergenic | 25.0% |
!! | TAAATCACATTTGTTAAGGT+CGG | + | chr7.3:236788-236807 | None:intergenic | 25.0% |
AGCTGTCATAATTTCTGATA+AGG | - | chr7.3:236348-236367 | MS.gene22760:CDS | 30.0% | |
GGCATGCAATGTAATAATAT+TGG | + | chr7.3:236916-236935 | None:intergenic | 30.0% | |
TGTTCTCTTAATGTGTCTTT+CGG | + | chr7.3:236301-236320 | None:intergenic | 30.0% | |
TTACAACTGCAATTACAATC+AGG | - | chr7.3:236871-236890 | MS.gene22760:intron | 30.0% | |
! | AAATCACATTTGTTAAGGTC+GGG | + | chr7.3:236787-236806 | None:intergenic | 30.0% |
AAAGTGACAGTTTGTGTTTG+TGG | - | chr7.3:237276-237295 | MS.gene22760:CDS | 35.0% | |
AAGTGACAGTTTGTGTTTGT+GGG | - | chr7.3:237277-237296 | MS.gene22760:CDS | 35.0% | |
ATATATACCCGTAGAAAGGA+AGG | + | chr7.3:236654-236673 | None:intergenic | 35.0% | |
ATCTCCTCTTTCTTTCATTC+AGG | - | chr7.3:236813-236832 | MS.gene22760:intron | 35.0% | |
CAGAAATTATGACAGCTTCA+AGG | + | chr7.3:236345-236364 | None:intergenic | 35.0% | |
CATATGATCTGTTGCAATGT+AGG | + | chr7.3:236849-236868 | None:intergenic | 35.0% | |
TATATACCCGTAGAAAGGAA+GGG | + | chr7.3:236653-236672 | None:intergenic | 35.0% | |
TGAATATTGATAGGTCCAGT+TGG | - | chr7.3:237303-237322 | MS.gene22760:CDS | 35.0% | |
TGTAACATTCAAAGATGCAG+AGG | - | chr7.3:236399-236418 | MS.gene22760:CDS | 35.0% | |
TGTACCTGAATGAAAGAAAG+AGG | + | chr7.3:236820-236839 | None:intergenic | 35.0% | |
TGTTACAAATCCATAGCCTT+TGG | + | chr7.3:236386-236405 | None:intergenic | 35.0% | |
! | AATGATAATGATGAGTTGGG+TGG | + | chr7.3:237150-237169 | None:intergenic | 35.0% |
!! | CGTGATGATGATGGAATATT+GGG | + | chr7.3:236630-236649 | None:intergenic | 35.0% |
!! | GTGATGATGATGGAATATTG+GGG | + | chr7.3:236629-236648 | None:intergenic | 35.0% |
!! | TGTGGGTGTTGAATATTGAT+AGG | - | chr7.3:237294-237313 | MS.gene22760:CDS | 35.0% |
!!! | CTTGTTTGTTTTGGGTGAAA+GGG | - | chr7.3:236755-236774 | MS.gene22760:intron | 35.0% |
AACTGCAATATCGCTTCTCT+TGG | - | chr7.3:236475-236494 | MS.gene22760:CDS | 40.0% | |
AAGAGAAGCGATATTGCAGT+TGG | + | chr7.3:236476-236495 | None:intergenic | 40.0% | |
AATGGATCACCATCACAGTT+TGG | - | chr7.3:236226-236245 | MS.gene22760:intron | 40.0% | |
AGAAGAAGGAGGAGAAGTTA+TGG | + | chr7.3:236524-236543 | None:intergenic | 40.0% | |
AGAGTGAGAGAGAGAGATAT+GGG | - | chr7.3:236727-236746 | MS.gene22760:intron | 40.0% | |
ATGATCTGTTGCAATGTAGG+TGG | + | chr7.3:236846-236865 | None:intergenic | 40.0% | |
ATGGATCACCATCACAGTTT+GGG | - | chr7.3:236227-236246 | MS.gene22760:intron | 40.0% | |
CAGAAACTGAGCTATGGAAT+GGG | - | chr7.3:236992-237011 | MS.gene22760:CDS | 40.0% | |
CCTTTCACCCAAAACAAACA+AGG | + | chr7.3:236757-236776 | None:intergenic | 40.0% | |
GAACCAACTGTGATCATCAA+TGG | - | chr7.3:236442-236461 | MS.gene22760:CDS | 40.0% | |
GAAGAAGGAGGAGAAGTTAT+GGG | + | chr7.3:236523-236542 | None:intergenic | 40.0% | |
GCAGGTTCAATGGTATTATC+CGG | - | chr7.3:236582-236601 | MS.gene22760:intron | 40.0% | |
GTTCAATGGTATTATCCGGT+GGG | - | chr7.3:236586-236605 | MS.gene22760:intron | 40.0% | |
TAACCTGTTGTAGTAGGACT+AGG | + | chr7.3:237190-237209 | None:intergenic | 40.0% | |
TGAATGCTTCAAAAGGGTAG+TGG | - | chr7.3:237332-237351 | MS.gene22760:CDS | 40.0% | |
TGATCTGTTGCAATGTAGGT+GGG | + | chr7.3:236845-236864 | None:intergenic | 40.0% | |
!! | ACGCTGACAAAAGTGTTTGT+TGG | - | chr7.3:236256-236275 | MS.gene22760:intron | 40.0% |
!! | CTGACAAAAGTGTTTGTTGG+AGG | - | chr7.3:236259-236278 | MS.gene22760:intron | 40.0% |
!! | GCGTGATGATGATGGAATAT+TGG | + | chr7.3:236631-236650 | None:intergenic | 40.0% |
!! | GGGACATCCTTGTTTGTTTT+GGG | - | chr7.3:236747-236766 | MS.gene22760:intron | 40.0% |
!! | TGATGATGGAATATTGGGGA+AGG | + | chr7.3:236625-236644 | None:intergenic | 40.0% |
!! | TGGGACATCCTTGTTTGTTT+TGG | - | chr7.3:236746-236765 | MS.gene22760:intron | 40.0% |
!!! | CCTTGTTTGTTTTGGGTGAA+AGG | - | chr7.3:236754-236773 | MS.gene22760:intron | 40.0% |
AAACTGAGCTATGGAATGGG+TGG | - | chr7.3:236995-237014 | MS.gene22760:CDS | 45.0% | |
AACTGAGCTATGGAATGGGT+GGG | - | chr7.3:236996-237015 | MS.gene22760:CDS | 45.0% | |
AAGCGATATTGCAGTTGGCT+CGG | + | chr7.3:236471-236490 | None:intergenic | 45.0% | |
AATACCATTGAACCTGCTGC+TGG | + | chr7.3:236579-236598 | None:intergenic | 45.0% | |
ACTCCTAGTCCTACTACAAC+AGG | - | chr7.3:237184-237203 | MS.gene22760:CDS | 45.0% | |
AGCAGCAACAGCAACAACAA+TGG | - | chr7.3:236208-236227 | MS.gene22760:CDS | 45.0% | |
ATTGATAGGTCCAGTTGGCA+CGG | - | chr7.3:237308-237327 | MS.gene22760:CDS | 45.0% | |
CACGGGTGAATGCTTCAAAA+GGG | - | chr7.3:237326-237345 | MS.gene22760:CDS | 45.0% | |
CGAATGCAGAAACTGAGCTA+TGG | - | chr7.3:236986-237005 | MS.gene22760:CDS | 45.0% | |
GAAGTTATGGGAGAAGACCT+TGG | + | chr7.3:236511-236530 | None:intergenic | 45.0% | |
GAGAGTGAGAGAGAGAGATA+TGG | - | chr7.3:236726-236745 | MS.gene22760:intron | 45.0% | |
GCAGAAACTGAGCTATGGAA+TGG | - | chr7.3:236991-237010 | MS.gene22760:CDS | 45.0% | |
GGTTCAATGGTATTATCCGG+TGG | - | chr7.3:236585-236604 | MS.gene22760:intron | 45.0% | |
TATCTCTCTCTCTCACTCTC+TGG | + | chr7.3:236726-236745 | None:intergenic | 45.0% | |
TGATGGAATATTGGGGAAGG+AGG | + | chr7.3:236622-236641 | None:intergenic | 45.0% | |
TGGATCACCATCACAGTTTG+GGG | - | chr7.3:236228-236247 | MS.gene22760:intron | 45.0% | |
TGTAGTAGGACTAGGAGTGA+TGG | + | chr7.3:237182-237201 | None:intergenic | 45.0% | |
TTATGGGAGAAGACCTTGGA+CGG | + | chr7.3:236507-236526 | None:intergenic | 45.0% | |
! | AATATTGGGGAAGGAGGTGT+GGG | + | chr7.3:236616-236635 | None:intergenic | 45.0% |
! | CGACCATTGATGATCACAGT+TGG | + | chr7.3:236448-236467 | None:intergenic | 45.0% |
! | TGAGTTGGGTGGAAGATTTG+AGG | + | chr7.3:237139-237158 | None:intergenic | 45.0% |
!! | TAGGACTAGGAGTGATGGAT+GGG | + | chr7.3:237177-237196 | None:intergenic | 45.0% |
!!! | AGTTTAATTTATAAAATAAA+AGG | + | chr7.3:237224-237243 | None:intergenic | 5.0% |
!!! | GTTTAATTTATAAAATAAAA+GGG | + | chr7.3:237223-237242 | None:intergenic | 5.0% |
!!! | TTAATTTTAATTTGAAAAAA+TGG | - | chr7.3:236958-236977 | MS.gene22760:CDS | 5.0% |
AAGGTTACCGGCAGATCCAA+AGG | - | chr7.3:236367-236386 | MS.gene22760:CDS | 50.0% | |
ACTGAGCTATGGAATGGGTG+GGG | - | chr7.3:236997-237016 | MS.gene22760:CDS | 50.0% | |
AGATGCAGAGGCTGCAAAGA+AGG | - | chr7.3:236411-236430 | MS.gene22760:CDS | 50.0% | |
ATCACGCCCTTCCTTTCTAC+GGG | - | chr7.3:236644-236663 | MS.gene22760:intron | 50.0% | |
ATCTGTAGACAGGAGGAGCA+GGG | + | chr7.3:237084-237103 | None:intergenic | 50.0% | |
CATCACGCCCTTCCTTTCTA+CGG | - | chr7.3:236643-236662 | MS.gene22760:intron | 50.0% | |
CTACAGATCAACCGAGGCTA+TGG | - | chr7.3:237096-237115 | MS.gene22760:CDS | 50.0% | |
GAATATTGGGGAAGGAGGTG+TGG | + | chr7.3:236617-236636 | None:intergenic | 50.0% | |
GCACGGGTGAATGCTTCAAA+AGG | - | chr7.3:237325-237344 | MS.gene22760:CDS | 50.0% | |
GTTGGGTGGAAGATTTGAGG+TGG | + | chr7.3:237136-237155 | None:intergenic | 50.0% | |
GTTGTGTCCCCAAACTGTGA+TGG | + | chr7.3:236238-236257 | None:intergenic | 50.0% | |
TCCATAGCCTTTGGATCTGC+CGG | + | chr7.3:236377-236396 | None:intergenic | 50.0% | |
TCCTGTCTACAGATCAACCG+AGG | - | chr7.3:237090-237109 | MS.gene22760:CDS | 50.0% | |
TCGGTTGATCTGTAGACAGG+AGG | + | chr7.3:237091-237110 | None:intergenic | 50.0% | |
TGTGTCTTTCGGAGTTTCCC+AGG | + | chr7.3:236290-236309 | None:intergenic | 50.0% | |
TTGATAGGTCCAGTTGGCAC+GGG | - | chr7.3:237309-237328 | MS.gene22760:CDS | 50.0% | |
! | AAGGAAGGGCGTGATGATGA+TGG | + | chr7.3:236639-236658 | None:intergenic | 50.0% |
! | GGTGGAAGATTTGAGGTGGA+GGG | + | chr7.3:237132-237151 | None:intergenic | 50.0% |
! | GTAGGACTAGGAGTGATGGA+TGG | + | chr7.3:237178-237197 | None:intergenic | 50.0% |
! | GTTTGTTGGAGGTCTTGCCT+GGG | - | chr7.3:236270-236289 | MS.gene22760:intron | 50.0% |
! | TGTTTGTTGGAGGTCTTGCC+TGG | - | chr7.3:236269-236288 | MS.gene22760:intron | 50.0% |
!! | AGGACTAGGAGTGATGGATG+GGG | + | chr7.3:237176-237195 | None:intergenic | 50.0% |
AAGCATTCACCCGTGCCAAC+TGG | + | chr7.3:237321-237340 | None:intergenic | 55.0% | |
ACCGGCAGATCCAAAGGCTA+TGG | - | chr7.3:236373-236392 | MS.gene22760:CDS | 55.0% | |
ATCAACCGAGGCTATGGCCA+TGG | - | chr7.3:237102-237121 | MS.gene22760:CDS | 55.0% | |
CTGAGCTATGGAATGGGTGG+GGG | - | chr7.3:236998-237017 | MS.gene22760:CDS | 55.0% | |
GATCTGTAGACAGGAGGAGC+AGG | + | chr7.3:237085-237104 | None:intergenic | 55.0% | |
GCAACCAGCAGCAGGTTCAA+TGG | - | chr7.3:236572-236591 | MS.gene22760:intron | 55.0% | |
GCCTCGGTTGATCTGTAGAC+AGG | + | chr7.3:237094-237113 | None:intergenic | 55.0% | |
TCAACCGAGGCTATGGCCAT+GGG | - | chr7.3:237103-237122 | MS.gene22760:CDS | 55.0% | |
TGAGCTATGGAATGGGTGGG+GGG | - | chr7.3:236999-237018 | MS.gene22760:CDS | 55.0% | |
TGGTTGCTGCGGTGGATCTT+TGG | + | chr7.3:236559-236578 | None:intergenic | 55.0% | |
TTGCTGCGGTGGATCTTTGG+AGG | + | chr7.3:236556-236575 | None:intergenic | 55.0% | |
! | GCAGGGTGGTGGTACATGAT+TGG | + | chr7.3:237067-237086 | None:intergenic | 55.0% |
! | GGGTGGAAGATTTGAGGTGG+AGG | + | chr7.3:237133-237152 | None:intergenic | 55.0% |
! | TGGATCTTTGGAGGAGGAGG+AGG | + | chr7.3:236547-236566 | None:intergenic | 55.0% |
AGCTATGGAATGGGTGGGGG+GGG | - | chr7.3:237001-237020 | MS.gene22760:CDS | 60.0% | |
GACACCCATGGCCATAGCCT+CGG | + | chr7.3:237110-237129 | None:intergenic | 60.0% | |
GAGCTATGGAATGGGTGGGG+GGG | - | chr7.3:237000-237019 | MS.gene22760:CDS | 60.0% | |
GCACCCACAATAGCCTGCCT+CGG | + | chr7.3:237040-237059 | None:intergenic | 60.0% | |
GGAGGAGGAGGAGAAGAAGG+AGG | + | chr7.3:236535-236554 | None:intergenic | 60.0% | |
GGAGGAGGAGGAGGAGAAGA+AGG | + | chr7.3:236538-236557 | None:intergenic | 60.0% | |
GGCTGCAAAGAAGGCTTGCG+AGG | - | chr7.3:236420-236439 | MS.gene22760:CDS | 60.0% | |
TGTAGACAGGAGGAGCAGGG+TGG | + | chr7.3:237081-237100 | None:intergenic | 60.0% | |
TTGAGGTGGAGGGACACCCA+TGG | + | chr7.3:237122-237141 | None:intergenic | 60.0% | |
! | CGGTGGATCTTTGGAGGAGG+AGG | + | chr7.3:236550-236569 | None:intergenic | 60.0% |
! | CTGCGGTGGATCTTTGGAGG+AGG | + | chr7.3:236553-236572 | None:intergenic | 60.0% |
! | GAACCTGCTGCTGGTTGCTG+CGG | + | chr7.3:236570-236589 | None:intergenic | 60.0% |
AGACAGGAGGAGCAGGGTGG+TGG | + | chr7.3:237078-237097 | None:intergenic | 65.0% | |
CCACAATAGCCTGCCTCGGC+GGG | + | chr7.3:237036-237055 | None:intergenic | 65.0% | |
CCCACAATAGCCTGCCTCGG+CGG | + | chr7.3:237037-237056 | None:intergenic | 65.0% | |
CCGCCGAGGCAGGCTATTGT+GGG | - | chr7.3:237034-237053 | MS.gene22760:CDS | 65.0% | |
! | GGAGGTGTGGGTGTTCCCAC+CGG | + | chr7.3:236604-236623 | None:intergenic | 65.0% |
!! | CTCTTGGTGCTCGCCGTCCA+AGG | - | chr7.3:236491-236510 | MS.gene22760:CDS | 65.0% |
CCACCGCAGCAACCAGCAGC+AGG | - | chr7.3:236564-236583 | MS.gene22760:intron | 70.0% | |
CCCGCCGAGGCAGGCTATTG+TGG | - | chr7.3:237033-237052 | MS.gene22760:CDS | 70.0% | |
CTACGTGTACCCGCCGAGGC+AGG | - | chr7.3:237024-237043 | MS.gene22760:CDS | 70.0% | |
! | CCTGCTGCTGGTTGCTGCGG+TGG | + | chr7.3:236567-236586 | None:intergenic | 70.0% |
GGGGCTACGTGTACCCGCCG+AGG | - | chr7.3:237020-237039 | MS.gene22760:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 236193 | 237359 | 236193 | ID=MS.gene22760 |
chr7.3 | mRNA | 236193 | 237359 | 236193 | ID=MS.gene22760.t1;Parent=MS.gene22760 |
chr7.3 | exon | 236887 | 237359 | 236887 | ID=MS.gene22760.t1.exon1;Parent=MS.gene22760.t1 |
chr7.3 | CDS | 236887 | 237359 | 236887 | ID=cds.MS.gene22760.t1;Parent=MS.gene22760.t1 |
chr7.3 | exon | 236660 | 236717 | 236660 | ID=MS.gene22760.t1.exon2;Parent=MS.gene22760.t1 |
chr7.3 | CDS | 236660 | 236717 | 236660 | ID=cds.MS.gene22760.t1;Parent=MS.gene22760.t1 |
chr7.3 | exon | 236347 | 236557 | 236347 | ID=MS.gene22760.t1.exon3;Parent=MS.gene22760.t1 |
chr7.3 | CDS | 236347 | 236557 | 236347 | ID=cds.MS.gene22760.t1;Parent=MS.gene22760.t1 |
chr7.3 | exon | 236193 | 236236 | 236193 | ID=MS.gene22760.t1.exon4;Parent=MS.gene22760.t1 |
chr7.3 | CDS | 236193 | 236236 | 236193 | ID=cds.MS.gene22760.t1;Parent=MS.gene22760.t1 |
Gene Sequence |
Protein sequence |