Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052223.t1 | XP_003601984.1 | 100 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 1.70E-86 | 328.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052223.t1 | Q9LX15 | 46.9 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 5.0e-31 | 135.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052223.t1 | G7J4B2 | 100.0 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 1.2e-86 | 328.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene052223 | 0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene050329 | MS.gene052223 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene052223 | 0.805562 | 1.26E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene052223 | 0.822572 | 2.20E-53 | -1.69E-46 |
| MS.gene051996 | MS.gene052223 | 0.834366 | 3.12E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene052223 | 0.811455 | 6.94E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene05233 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene052705 | 0.818943 | 1.51E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene052706 | 0.828527 | 8.55E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene054138 | 0.804649 | 1.95E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene054277 | 0.839085 | 1.96E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene054742 | 0.848229 | 7.00E-60 | -1.69E-46 |
| MS.gene052223 | MS.gene055157 | 0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene055601 | 0.822997 | 1.76E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene056330 | 0.872418 | 3.23E-67 | -1.69E-46 |
| MS.gene052223 | MS.gene056680 | 0.821555 | 3.79E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene056690 | 0.843147 | 1.68E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene056691 | 0.847824 | 9.06E-60 | -1.69E-46 |
| MS.gene052223 | MS.gene056899 | 0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene056920 | 0.841786 | 3.85E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene056922 | 0.810974 | 8.83E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene056923 | 0.851266 | 9.93E-61 | -1.69E-46 |
| MS.gene052223 | MS.gene056924 | 0.858386 | 8.54E-63 | -1.69E-46 |
| MS.gene052223 | MS.gene056925 | 0.822311 | 2.53E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene058218 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene059043 | 0.813272 | 2.78E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene059328 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene059892 | 0.804211 | 2.41E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene060087 | 0.833305 | 5.76E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene062651 | 0.80777 | 4.30E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene063988 | 0.835508 | 1.61E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene064493 | 0.814363 | 1.60E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene065724 | 0.825483 | 4.57E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene065728 | 0.82609 | 3.28E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene065729 | 0.831174 | 1.94E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene06593 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene066937 | 0.873165 | 1.82E-67 | -1.69E-46 |
| MS.gene052223 | MS.gene06756 | 0.855126 | 7.78E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene06805 | 0.804321 | 2.28E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene070257 | 0.802027 | 6.82E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene070651 | 0.821527 | 3.85E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene071108 | 0.839418 | 1.60E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene071405 | 0.81577 | 7.80E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene071841 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene073286 | 0.801412 | 9.12E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene074299 | 0.835844 | 1.32E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene07840 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene07905 | 0.820625 | 6.21E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene08872 | 0.803929 | 2.76E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene08883 | 0.818304 | 2.10E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene09768 | 0.839803 | 1.27E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene22760 | 0.80083 | 1.20E-48 | -1.69E-46 |
| MS.gene052223 | MS.gene23026 | 0.835762 | 1.39E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene23507 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene23869 | 0.83527 | 1.85E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene23957 | 0.819194 | 1.32E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene24107 | 0.808724 | 2.69E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene24108 | 0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene24583 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene24585 | 0.806398 | 8.39E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene24659 | 0.806274 | 8.91E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene24881 | 0.81179 | 5.87E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene25138 | 0.839583 | 1.45E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene25652 | 0.845911 | 3.02E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene26285 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene052223 | MS.gene26289 | 0.864204 | 1.44E-64 | -1.69E-46 |
| MS.gene052223 | MS.gene26624 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene26705 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene28548 | 0.861059 | 1.34E-63 | -1.69E-46 |
| MS.gene052223 | MS.gene30382 | 0.843947 | 1.02E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene30518 | 0.821646 | 3.62E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene30519 | 0.827345 | 1.65E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene30520 | 0.833467 | 5.24E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene30666 | 0.846886 | 1.64E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene31828 | 0.817223 | 3.69E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene32342 | 0.803523 | 3.35E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene33335 | 0.829093 | 6.24E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene35433 | 0.860858 | 1.54E-63 | -1.69E-46 |
| MS.gene052223 | MS.gene35690 | 0.874938 | 4.57E-68 | -1.69E-46 |
| MS.gene052223 | MS.gene35781 | 0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene35794 | 0.807663 | 4.53E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene35951 | 0.820253 | 7.56E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene37233 | -0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene37355 | 0.813971 | 1.95E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene37742 | 0.814156 | 1.78E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene38338 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene40846 | 0.827325 | 1.66E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene42080 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene052223 | MS.gene42096 | 0.846465 | 2.14E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene42798 | -0.820656 | 6.11E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene43162 | 0.855039 | 8.24E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene43874 | 0.815267 | 1.01E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene44958 | 0.8512 | 1.04E-60 | -1.69E-46 |
| MS.gene052223 | MS.gene45463 | 0.834089 | 3.67E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene45464 | 0.847164 | 1.38E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene45694 | 0.870023 | 1.99E-66 | -1.69E-46 |
| MS.gene052223 | MS.gene45695 | 0.846495 | 2.10E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene46267 | 0.812576 | 3.96E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene48169 | 0.893098 | 8.62E-75 | -1.69E-46 |
| MS.gene052223 | MS.gene50055 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene50057 | 0.814497 | 1.49E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene50066 | 0.800926 | 1.15E-48 | -1.69E-46 |
| MS.gene052223 | MS.gene50068 | 0.812038 | 5.18E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene50069 | 0.864434 | 1.22E-64 | -1.69E-46 |
| MS.gene052223 | MS.gene51034 | -0.811095 | 8.31E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene51331 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene52248 | 0.821346 | 4.24E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene52368 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene52369 | 0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene52371 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene54346 | 0.815708 | 8.05E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene54611 | 0.910942 | 1.06E-82 | -1.69E-46 |
| MS.gene052223 | MS.gene54630 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene57737 | 0.868159 | 8.03E-66 | -1.69E-46 |
| MS.gene052223 | MS.gene58458 | 0.885908 | 5.42E-72 | -1.69E-46 |
| MS.gene052223 | MS.gene58740 | 0.870199 | 1.75E-66 | -1.69E-46 |
| MS.gene052223 | MS.gene58786 | 0.828339 | 9.50E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene59920 | 0.832352 | 9.93E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene60041 | 0.811414 | 7.09E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene60578 | 0.806403 | 8.37E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene60838 | 0.82141 | 4.10E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene60840 | 0.809676 | 1.68E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene60841 | 0.80745 | 5.03E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene60846 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene60847 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene62885 | 0.855019 | 8.35E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene62886 | 0.854633 | 1.08E-61 | -1.69E-46 |
| MS.gene052223 | MS.gene63913 | 0.819951 | 8.87E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene64584 | 0.86111 | 1.29E-63 | -1.69E-46 |
| MS.gene052223 | MS.gene65144 | 0.847037 | 1.49E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene67371 | 0.860402 | 2.12E-63 | -1.69E-46 |
| MS.gene052223 | MS.gene67377 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene67670 | 0.88099 | 3.48E-70 | -1.69E-46 |
| MS.gene052223 | MS.gene67711 | 0.808768 | 2.63E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene69355 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene70062 | 0.832457 | 9.35E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene70064 | 0.832174 | 1.10E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene71342 | 0.854213 | 1.43E-61 | -1.69E-46 |
| MS.gene052223 | MS.gene71346 | 0.841595 | 4.32E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene71924 | 0.845185 | 4.75E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene71927 | 0.855694 | 5.31E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene72924 | 0.849364 | 3.39E-60 | -1.69E-46 |
| MS.gene052223 | MS.gene73510 | 0.82738 | 1.62E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene73512 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene73993 | 0.857294 | 1.80E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene73995 | 0.889286 | 2.77E-73 | -1.69E-46 |
| MS.gene052223 | MS.gene74253 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene74384 | 0.843606 | 1.26E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene74553 | 0.838992 | 2.07E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene75460 | 0.965981 | 2.58E-125 | -1.69E-46 |
| MS.gene052223 | MS.gene79232 | 0.956017 | 7.91E-114 | -1.69E-46 |
| MS.gene052223 | MS.gene79585 | 0.824789 | 6.67E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene79962 | 0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene80293 | 0.828235 | 1.01E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene80744 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene81350 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene81770 | 0.864582 | 1.10E-64 | -1.69E-46 |
| MS.gene052223 | MS.gene81774 | 0.845141 | 4.89E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene83008 | 0.856293 | 3.55E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene83011 | 0.848083 | 7.68E-60 | -1.69E-46 |
| MS.gene052223 | MS.gene83012 | 0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene83366 | 0.806073 | 9.82E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene84143 | 0.857904 | 1.19E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene84373 | 0.828377 | 9.30E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene85260 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene85276 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene85750 | 0.893281 | 7.27E-75 | -1.69E-46 |
| MS.gene052223 | MS.gene86331 | -0.80339 | 3.57E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene86387 | 0.807955 | 3.92E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene87043 | 0.864608 | 1.08E-64 | -1.69E-46 |
| MS.gene052223 | MS.gene87222 | 0.840082 | 1.08E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene87346 | 0.840634 | 7.73E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene88365 | 0.842598 | 2.35E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene88366 | 0.839445 | 1.58E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene88971 | 0.826075 | 3.31E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene89031 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene89773 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene90104 | 0.823546 | 1.31E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene90814 | 0.846343 | 2.31E-59 | -1.69E-46 |
| MS.gene052223 | MS.gene90899 | 0.808033 | 3.78E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene91221 | 0.868565 | 5.94E-66 | -1.69E-46 |
| MS.gene052223 | MS.gene91222 | 0.856519 | 3.05E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene91754 | 0.815125 | 1.08E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene93200 | 0.822713 | 2.04E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene93632 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene95352 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene95353 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene97024 | 0.83025 | 3.26E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene97182 | 0.821753 | 3.41E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene97293 | 0.836448 | 9.30E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene97335 | 0.857781 | 1.29E-62 | -1.69E-46 |
| MS.gene052223 | MS.gene97790 | 0.822588 | 2.19E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene98466 | 0.818481 | 1.92E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene98470 | 0.832539 | 8.92E-56 | -1.69E-46 |
| MS.gene052223 | MS.gene99544 | 0.85643 | 3.24E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052223.t1 | MTR_3g087540 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 6.30e-120 | 335 |
| MS.gene052223.t1 | MTR_3g073990 | 39.189 | 148 | 82 | 3 | 11 | 152 | 8 | 153 | 2.20e-31 | 110 |
| MS.gene052223.t1 | MTR_2g016020 | 32.704 | 159 | 96 | 7 | 1 | 152 | 1 | 155 | 1.53e-22 | 88.6 |
| MS.gene052223.t1 | MTR_2g077940 | 29.688 | 128 | 85 | 3 | 24 | 151 | 42 | 164 | 4.90e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052223.t1 | AT5G10130 | 46.914 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 6.59e-46 | 147 |
| MS.gene052223.t1 | AT4G08685 | 40.000 | 165 | 87 | 4 | 1 | 159 | 1 | 159 | 2.60e-36 | 123 |
| MS.gene052223.t1 | AT1G78040 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.60e-34 | 119 |
| MS.gene052223.t1 | AT1G78040 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.60e-34 | 119 |
| MS.gene052223.t1 | AT1G78040 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.60e-34 | 119 |
| MS.gene052223.t1 | AT1G29140 | 35.669 | 157 | 92 | 3 | 4 | 152 | 6 | 161 | 2.48e-26 | 98.2 |
| MS.gene052223.t1 | AT5G45880 | 39.024 | 123 | 70 | 3 | 25 | 143 | 35 | 156 | 4.26e-23 | 90.1 |
| MS.gene052223.t1 | AT4G18596 | 33.117 | 154 | 90 | 4 | 1 | 142 | 1 | 153 | 1.80e-22 | 88.2 |
| MS.gene052223.t1 | AT4G18596 | 33.117 | 154 | 90 | 4 | 1 | 142 | 47 | 199 | 4.57e-22 | 88.6 |
Find 45 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATTGTGTTGCTGTTAA+TGG | 0.278593 | 3.2:-74673232 | MS.gene052223:CDS |
| AATAAACACAACCTTTGATA+TGG | 0.316996 | 3.2:+74673163 | None:intergenic |
| GTGTATTACACGATGATATT+GGG | 0.373900 | 3.2:+74672713 | None:intergenic |
| GGTGTATTACACGATGATAT+TGG | 0.406710 | 3.2:+74672712 | None:intergenic |
| CACTGGAACATACAACATAA+TGG | 0.429786 | 3.2:-74672785 | MS.gene052223:CDS |
| CGTCCATAGTCTTCCTGTCT+TGG | 0.431661 | 3.2:+74672839 | None:intergenic |
| ACAAGTAATATTTGAGGAGT+TGG | 0.437901 | 3.2:+74672566 | None:intergenic |
| TAAAGGGAGGATAGAGATGA+GGG | 0.446926 | 3.2:+74673203 | None:intergenic |
| AAATGCTATGGGTTACTTCA+AGG | 0.456909 | 3.2:-74672614 | MS.gene052223:CDS |
| TAGGTGCAAAGGTGGGAATT+CGG | 0.460306 | 3.2:-74672864 | MS.gene052223:CDS |
| TGGGAATTCGGTGCCAAGAC+AGG | 0.469322 | 3.2:-74672852 | MS.gene052223:CDS |
| TATTGTGATACTTGCCGTGC+TGG | 0.471219 | 3.2:-74673144 | MS.gene052223:CDS |
| GTGCCAAGACAGGAAGACTA+TGG | 0.475430 | 3.2:-74672842 | MS.gene052223:CDS |
| TCTTCACTATGCAAATGCTA+TGG | 0.481660 | 3.2:-74672626 | MS.gene052223:CDS |
| TAGCATTTGCATAGTGAAGA+TGG | 0.484441 | 3.2:+74672629 | None:intergenic |
| GATCTGTTACGCCCAGGGTC+CGG | 0.486304 | 3.2:+74672691 | None:intergenic |
| AACATAGCTGTGGCAAGTAA+AGG | 0.486675 | 3.2:+74673186 | None:intergenic |
| ACATAGCTGTGGCAAGTAAA+GGG | 0.489307 | 3.2:+74673187 | None:intergenic |
| GGAGGATAGAGATGAGGGAA+AGG | 0.493157 | 3.2:+74673208 | None:intergenic |
| AGGAGTTGGTGGCAATATTG+AGG | 0.508425 | 3.2:+74672580 | None:intergenic |
| AATCAGACAAGTAATATTTG+AGG | 0.510401 | 3.2:+74672560 | None:intergenic |
| TGCTGGATCTGTTACGCCCA+GGG | 0.512778 | 3.2:+74672686 | None:intergenic |
| AGTAATATTTGAGGAGTTGG+TGG | 0.513246 | 3.2:+74672569 | None:intergenic |
| GTAGTGAGTGAGCACAATGC+TGG | 0.521929 | 3.2:+74672669 | None:intergenic |
| GAGGATAGAGATGAGGGAAA+GGG | 0.521934 | 3.2:+74673209 | None:intergenic |
| ATGCTGGATCTGTTACGCCC+AGG | 0.535067 | 3.2:+74672685 | None:intergenic |
| CTTCACTATGCAAATGCTAT+GGG | 0.535954 | 3.2:-74672625 | MS.gene052223:CDS |
| TCGTGTAATACACCGGACCC+TGG | 0.543647 | 3.2:-74672703 | MS.gene052223:CDS |
| TTGCATAGTGAAGATGGTTG+AGG | 0.549905 | 3.2:+74672635 | None:intergenic |
| TTCTTGATTAGGTGCAAAGG+TGG | 0.550705 | 3.2:-74672872 | MS.gene052223:intron |
| CGTGTAATACACCGGACCCT+GGG | 0.556675 | 3.2:-74672702 | MS.gene052223:CDS |
| TGGTGGCAATATTGAGGCAA+AGG | 0.557338 | 3.2:+74672586 | None:intergenic |
| CATTATGTTGTATGTTCCAG+TGG | 0.561706 | 3.2:+74672786 | None:intergenic |
| GTAAAGGGAGGATAGAGATG+AGG | 0.562442 | 3.2:+74673202 | None:intergenic |
| CATTGCTAATCATCATGGCA+AGG | 0.587013 | 3.2:-74673251 | None:intergenic |
| CGATTCTTGATTAGGTGCAA+AGG | 0.587702 | 3.2:-74672875 | MS.gene052223:intron |
| ACAGCTATGTTCCATATCAA+AGG | 0.587960 | 3.2:-74673174 | MS.gene052223:CDS |
| GAAGGAGTGACAGATTCCAC+TGG | 0.617675 | 3.2:-74672802 | MS.gene052223:CDS |
| TTGGATGTAAAATGTGGCGT+TGG | 0.634933 | 3.2:+74673113 | None:intergenic |
| CGTTGGTTTCGAATCCAGCA+CGG | 0.637233 | 3.2:+74673130 | None:intergenic |
| TCTTGATTAGGTGCAAAGGT+GGG | 0.642740 | 3.2:-74672871 | MS.gene052223:intron |
| AATATCATCGTGTAATACAC+CGG | 0.667061 | 3.2:-74672710 | MS.gene052223:CDS |
| TTTACCTTGGATGTAAAATG+TGG | 0.673598 | 3.2:+74673107 | None:intergenic |
| TTTGATATGGAACATAGCTG+TGG | 0.697489 | 3.2:+74673176 | None:intergenic |
| TAGCTGTGGCAAGTAAAGGG+AGG | 0.702643 | 3.2:+74673190 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAAAAAATTTACGTTA+AGG | + | chr3.2:74672711-74672730 | None:intergenic | 15.0% |
| ! | AATAAACACAACCTTTGATA+TGG | + | chr3.2:74672626-74672645 | None:intergenic | 25.0% |
| ! | AATCAGACAAGTAATATTTG+AGG | + | chr3.2:74673229-74673248 | None:intergenic | 25.0% |
| AATATCATCGTGTAATACAC+CGG | - | chr3.2:74673076-74673095 | MS.gene052223:intron | 30.0% | |
| ACAAGTAATATTTGAGGAGT+TGG | + | chr3.2:74673223-74673242 | None:intergenic | 30.0% | |
| GTGTATTACACGATGATATT+GGG | + | chr3.2:74673076-74673095 | None:intergenic | 30.0% | |
| TATTGTGACGATTCTTGATT+AGG | - | chr3.2:74672903-74672922 | MS.gene052223:intron | 30.0% | |
| TGTAAAATGTACACATGATC+AGG | + | chr3.2:74672782-74672801 | None:intergenic | 30.0% | |
| TTTACCTTGGATGTAAAATG+TGG | + | chr3.2:74672682-74672701 | None:intergenic | 30.0% | |
| ! | CAGTTTTGCAAATATTGTCA+TGG | + | chr3.2:74673040-74673059 | None:intergenic | 30.0% |
| ACAGCTATGTTCCATATCAA+AGG | - | chr3.2:74672612-74672631 | MS.gene052223:CDS | 35.0% | |
| AGTAATATTTGAGGAGTTGG+TGG | + | chr3.2:74673220-74673239 | None:intergenic | 35.0% | |
| CACTGGAACATACAACATAA+TGG | - | chr3.2:74673001-74673020 | MS.gene052223:intron | 35.0% | |
| CATTATGTTGTATGTTCCAG+TGG | + | chr3.2:74673003-74673022 | None:intergenic | 35.0% | |
| CTTCACTATGCAAATGCTAT+GGG | - | chr3.2:74673161-74673180 | MS.gene052223:CDS | 35.0% | |
| GGTGTATTACACGATGATAT+TGG | + | chr3.2:74673077-74673096 | None:intergenic | 35.0% | |
| GTTAAGGTGTGTATTTACCT+TGG | + | chr3.2:74672695-74672714 | None:intergenic | 35.0% | |
| TAGCATTTGCATAGTGAAGA+TGG | + | chr3.2:74673160-74673179 | None:intergenic | 35.0% | |
| TCTTCACTATGCAAATGCTA+TGG | - | chr3.2:74673160-74673179 | MS.gene052223:CDS | 35.0% | |
| TTTGATATGGAACATAGCTG+TGG | + | chr3.2:74672613-74672632 | None:intergenic | 35.0% | |
| ! | AAATGCTATGGGTTACTTCA+AGG | - | chr3.2:74673172-74673191 | MS.gene052223:CDS | 35.0% |
| ! | AAGGATTGTGTTGCTGTTAA+TGG | - | chr3.2:74672554-74672573 | MS.gene052223:CDS | 35.0% |
| ! | TATGGACGAAGTTTTCTACA+CGG | - | chr3.2:74672962-74672981 | MS.gene052223:intron | 35.0% |
| AACATAGCTGTGGCAAGTAA+AGG | + | chr3.2:74672603-74672622 | None:intergenic | 40.0% | |
| ACATAGCTGTGGCAAGTAAA+GGG | + | chr3.2:74672602-74672621 | None:intergenic | 40.0% | |
| CGATTCTTGATTAGGTGCAA+AGG | - | chr3.2:74672911-74672930 | MS.gene052223:intron | 40.0% | |
| GTGCTCACTCACTACAAAAA+TGG | - | chr3.2:74673125-74673144 | MS.gene052223:CDS | 40.0% | |
| TAAAGGGAGGATAGAGATGA+GGG | + | chr3.2:74672586-74672605 | None:intergenic | 40.0% | |
| TCTTGATTAGGTGCAAAGGT+GGG | - | chr3.2:74672915-74672934 | MS.gene052223:intron | 40.0% | |
| TTCTTGATTAGGTGCAAAGG+TGG | - | chr3.2:74672914-74672933 | MS.gene052223:intron | 40.0% | |
| TTGCATAGTGAAGATGGTTG+AGG | + | chr3.2:74673154-74673173 | None:intergenic | 40.0% | |
| TTGGATGTAAAATGTGGCGT+TGG | + | chr3.2:74672676-74672695 | None:intergenic | 40.0% | |
| ! | AACGCCACATTTTACATCCA+AGG | - | chr3.2:74672675-74672694 | MS.gene052223:CDS | 40.0% |
| GAGGATAGAGATGAGGGAAA+GGG | + | chr3.2:74672580-74672599 | None:intergenic | 45.0% | |
| GTAAAGGGAGGATAGAGATG+AGG | + | chr3.2:74672587-74672606 | None:intergenic | 45.0% | |
| TAGGTGCAAAGGTGGGAATT+CGG | - | chr3.2:74672922-74672941 | MS.gene052223:intron | 45.0% | |
| TATTGTGATACTTGCCGTGC+TGG | - | chr3.2:74672642-74672661 | MS.gene052223:CDS | 45.0% | |
| TGGTGGCAATATTGAGGCAA+AGG | + | chr3.2:74673203-74673222 | None:intergenic | 45.0% | |
| ! | GACGAAGTTTTCTACACGGA+AGG | - | chr3.2:74672966-74672985 | MS.gene052223:intron | 45.0% |
| !! | AGGAGTTGGTGGCAATATTG+AGG | + | chr3.2:74673209-74673228 | None:intergenic | 45.0% |
| CGTCCATAGTCTTCCTGTCT+TGG | + | chr3.2:74672950-74672969 | None:intergenic | 50.0% | |
| GAAGGAGTGACAGATTCCAC+TGG | - | chr3.2:74672984-74673003 | MS.gene052223:intron | 50.0% | |
| GGAGGATAGAGATGAGGGAA+AGG | + | chr3.2:74672581-74672600 | None:intergenic | 50.0% | |
| GTAGTGAGTGAGCACAATGC+TGG | + | chr3.2:74673120-74673139 | None:intergenic | 50.0% | |
| GTGCCAAGACAGGAAGACTA+TGG | - | chr3.2:74672944-74672963 | MS.gene052223:intron | 50.0% | |
| TAGCTGTGGCAAGTAAAGGG+AGG | + | chr3.2:74672599-74672618 | None:intergenic | 50.0% | |
| !! | CGTTGGTTTCGAATCCAGCA+CGG | + | chr3.2:74672659-74672678 | None:intergenic | 50.0% |
| ATGCTGGATCTGTTACGCCC+AGG | + | chr3.2:74673104-74673123 | None:intergenic | 55.0% | |
| CGTGTAATACACCGGACCCT+GGG | - | chr3.2:74673084-74673103 | MS.gene052223:intron | 55.0% | |
| TCGTGTAATACACCGGACCC+TGG | - | chr3.2:74673083-74673102 | MS.gene052223:intron | 55.0% | |
| TGCTGGATCTGTTACGCCCA+GGG | + | chr3.2:74673103-74673122 | None:intergenic | 55.0% | |
| !! | TGGGAATTCGGTGCCAAGAC+AGG | - | chr3.2:74672934-74672953 | MS.gene052223:intron | 55.0% |
| GATCTGTTACGCCCAGGGTC+CGG | + | chr3.2:74673098-74673117 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74672549 | 74673259 | 74672549 | ID=MS.gene052223 |
| chr3.2 | mRNA | 74672549 | 74673259 | 74672549 | ID=MS.gene052223.t1;Parent=MS.gene052223 |
| chr3.2 | exon | 74673112 | 74673259 | 74673112 | ID=MS.gene052223.t1.exon1;Parent=MS.gene052223.t1 |
| chr3.2 | CDS | 74673112 | 74673259 | 74673112 | ID=cds.MS.gene052223.t1;Parent=MS.gene052223.t1 |
| chr3.2 | exon | 74672549 | 74672883 | 74672549 | ID=MS.gene052223.t1.exon2;Parent=MS.gene052223.t1 |
| chr3.2 | CDS | 74672549 | 74672883 | 74672549 | ID=cds.MS.gene052223.t1;Parent=MS.gene052223.t1 |
| Gene Sequence |
| Protein sequence |
